>ref|NM_191126.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1521

 Score =  155 bits (78), Expect = 2e-34
 Identities = 264/326 (80%)
 Strand = Plus / Minus

                                                                        
Query: 404  tctggttcctcttgaataaacttgtcgatgtagtaaagcataaagacaccacagtcaaag 463
            |||||| |||||||||||||| | || ||||| | ||||||||||| |||||||||| | 
Sbjct: 1304 tctggtgcctcttgaataaacctctcaatgtaatgaagcataaagataccacagtcatac 1245

                                                                        
Query: 464  tcgttttgctgctgtggaacctcgactttttccttatttatatttcttgaaagatttctc 523
            |  ||  ||||   ||| ||||  ||||||||||| ||||||||| |||| ||||   ||
Sbjct: 1244 ttattacgctgacttggcacctgaactttttccttgtttatattttttgatagatgattc 1185

                                                                        
Query: 524  catattttgcctgaaaagggaatatcataagaagaatccttctgtagatggcgccattct 583
            |||||| | ||||||||||| |||  |||||||||||| |||||||||||  ||||||||
Sbjct: 1184 catattctccctgaaaaggggatagtataagaagaatcattctgtagatgttgccattct 1125

                                                                        
Query: 584  tctacgaggtagctctcaatcacaccaaaaaccttgtcactgcaatgtattcctagagag 643
             ||| |||| |||||||||| |||  |||||| |    |||| |||| | ||||||||||
Sbjct: 1124 gctatgaggaagctctcaataacataaaaaacttcacgactggaatggagtcctagagag 1065

                                                                        
Query: 644  tccaagtgaaacactcttggcccgcattttatctcttttgcaggcatgaagataatgacc 703
            ||||||||||  | | | |||||  ||| | | ||||||||||||||| ||||||| | |
Sbjct: 1064 tccaagtgaagtattatcggcccagattctgtttcttttgcaggcatgcagataattatc 1005

                                      
Query: 704  aagctccaatgcatctgtccatgaat 729
            |||||||| ||||||| |||||||||
Sbjct: 1004 aagctccagtgcatctctccatgaat 979

>dbj|AK064546.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-B04, full
            insert sequence
          Length = 1471

 Score =  155 bits (78), Expect = 2e-34
 Identities = 264/326 (80%)
 Strand = Plus / Minus

                                                                        
Query: 404  tctggttcctcttgaataaacttgtcgatgtagtaaagcataaagacaccacagtcaaag 463
            |||||| |||||||||||||| | || ||||| | ||||||||||| |||||||||| | 
Sbjct: 1007 tctggtgcctcttgaataaacctctcaatgtaatgaagcataaagataccacagtcatac 948

                                                                        
Query: 464  tcgttttgctgctgtggaacctcgactttttccttatttatatttcttgaaagatttctc 523
            |  ||  ||||   ||| ||||  ||||||||||| ||||||||| |||| ||||   ||
Sbjct: 947  ttattacgctgacttggcacctgaactttttccttgtttatattttttgatagatgattc 888

                                                                        
Query: 524  catattttgcctgaaaagggaatatcataagaagaatccttctgtagatggcgccattct 583
            |||||| | ||||||||||| |||  |||||||||||| |||||||||||  ||||||||
Sbjct: 887  catattctccctgaaaaggggatagtataagaagaatcattctgtagatgttgccattct 828

                                                                        
Query: 584  tctacgaggtagctctcaatcacaccaaaaaccttgtcactgcaatgtattcctagagag 643
             ||| |||| |||||||||| |||  |||||| |    |||| |||| | ||||||||||
Sbjct: 827  gctatgaggaagctctcaataacataaaaaacttcacgactggaatggagtcctagagag 768

                                                                        
Query: 644  tccaagtgaaacactcttggcccgcattttatctcttttgcaggcatgaagataatgacc 703
            ||||||||||  | | | |||||  ||| | | ||||||||||||||| ||||||| | |
Sbjct: 767  tccaagtgaagtattatcggcccagattctgtttcttttgcaggcatgcagataattatc 708

                                      
Query: 704  aagctccaatgcatctgtccatgaat 729
            |||||||| ||||||| |||||||||
Sbjct: 707  aagctccagtgcatctctccatgaat 682

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                            
Query: 488      actttttccttatttatatttcttgaaagatttctccatattttgcctgaaaagggaata 547
                ||||||||||| ||||||||| |||| ||||   |||||||| | ||||||||||| |||
Sbjct: 30782852 actttttccttgtttatattttttgatagatgattccatattctccctgaaaaggggata 30782911

                                                                  
Query: 548      tcataagaagaatccttctgtagatggcgccattcttctacgaggtagct 597
                  |||||||||||| |||||||||||  |||||||| ||| |||| ||||
Sbjct: 30782912 gtataagaagaatcattctgtagatgttgccattctgctatgaggaagct 30782961



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                            
Query: 634      tcctagagagtccaagtgaaacactcttggcccgcattttatctcttttgcaggcatgaa 693
                ||||||||||||||||||||  | | | |||||  ||| | | ||||||||||||||| |
Sbjct: 30783170 tcctagagagtccaagtgaagtattatcggcccagattctgtttcttttgcaggcatgca 30783229

                                         
Query: 694      gataatgaccaagctccaatgcatc 718
                |||||| | ||||||||| ||||||
Sbjct: 30783230 gataattatcaagctccagtgcatc 30783254



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 404      tctggttcctcttgaataaacttgtcgatgtagtaaagcataaagacaccacagtca 460
                |||||| |||||||||||||| | || ||||| | ||||||||||| ||||||||||
Sbjct: 30782526 tctggtgcctcttgaataaacctctcaatgtaatgaagcataaagataccacagtca 30782582

>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                         
Query: 488   actttttccttatttatatttcttgaaagatttctccatattttgcctgaaaagggaata 547
             ||||||||||| ||||||||| |||| ||||   |||||||| | ||||||||||| |||
Sbjct: 72127 actttttccttgtttatattttttgatagatgattccatattctccctgaaaaggggata 72186

                                                               
Query: 548   tcataagaagaatccttctgtagatggcgccattcttctacgaggtagct 597
               |||||||||||| |||||||||||  |||||||| ||| |||| ||||
Sbjct: 72187 gtataagaagaatcattctgtagatgttgccattctgctatgaggaagct 72236



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 634   tcctagagagtccaagtgaaacactcttggcccgcattttatctcttttgcaggcatgaa 693
             ||||||||||||||||||||  | | | |||||  ||| | | ||||||||||||||| |
Sbjct: 72445 tcctagagagtccaagtgaagtattatcggcccagattctgtttcttttgcaggcatgca 72504

                                      
Query: 694   gataatgaccaagctccaatgcatc 718
             |||||| | ||||||||| ||||||
Sbjct: 72505 gataattatcaagctccagtgcatc 72529



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 404   tctggttcctcttgaataaacttgtcgatgtagtaaagcataaagacaccacagtca 460
             |||||| |||||||||||||| | || ||||| | ||||||||||| ||||||||||
Sbjct: 71801 tctggtgcctcttgaataaacctctcaatgtaatgaagcataaagataccacagtca 71857

>gb|AY111003.1| Zea mays CL57603_1 mRNA sequence
          Length = 645

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Plus

                                                                       
Query: 413 tcttgaataaacttgtcgatgtagtaaagcataaagacaccacagtcaaagtcgttttgc 472
           |||||||||||| |||| || ||||||||||||||||  ||||| ||| | |||||   |
Sbjct: 320 tcttgaataaacctgtcaatatagtaaagcataaagaggccacaatcatactcgttaccc 379

                                                                       
Query: 473 tgctgtggaacctcgactttttccttatttatatttcttgaaagatttctccatattttg 532
           ||  |||| ||||| |  |||||| |||| ||||||  |||||||   ||||||||  | 
Sbjct: 380 tgacgtggcacctcaatcttttccctattgatattttctgaaagacgcctccatatcctc 439

                                         
Query: 533 cctgaaaagggaatatcataagaagaatcc 562
           |||||||| |||||||||||||| ||||||
Sbjct: 440 cctgaaaatggaatatcataagacgaatcc 469

>emb|AL353733.14| Human DNA sequence from clone RP11-143N16 on chromosome 9, complete
             sequence
          Length = 95442

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 491   ttttccttatttatatttcttgaaaga 517
             ||||||||||||||||||| |||||||
Sbjct: 34929 ttttccttatttatatttcctgaaaga 34955

>ref|NM_126589.2| Arabidopsis thaliana RNA binding / aconitate hydratase/
           hydro-lyase/ iron ion binding / lyase AT2G05710 mRNA,
           complete cds
          Length = 3493

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 taaccttatcttcttcatcttc 243
           ||||||||||||||||||||||
Sbjct: 126 taaccttatcttcttcatcttc 147

>emb|AL109657.8|HSDJ842G6 Human DNA sequence from clone RP5-842G6 on chromosome 20 Contains the
             3' end of the C20orf7 gene for chromosome 20 open reading
             frame 7 (FLJ22324) and the 3' end of the C20orf50 gene for
             chromosome 20 open reading frame 50 (dJ631M13.1, similar
             to SEL1L (DKFZp434C1826)), complete sequence
          Length = 100272

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 493   ttccttatttatatttcttgaa 514
             ||||||||||||||||||||||
Sbjct: 50621 ttccttatttatatttcttgaa 50642

>emb|AL645745.7| Mouse DNA sequence from clone RP23-213G18 on chromosome 13 contains an
             H+ transporting mitochondrial F0 complex ATP synthase f2
             (Atp5j2) pseudogene, the Irf4 gene for interferon
             regulatory factor 4 and the 3' end of the gene for
             2410030I24RIK protein (ortholog of human SEC5), complete
             sequence
          Length = 137942

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 482   acctcgactttttccttatttatatt 507
             |||||||||| |||||||||||||||
Sbjct: 43484 acctcgacttcttccttatttatatt 43459

>gb|AY136414.1| Arabidopsis thaliana cytoplasmic aconitate hydratase (At2g05710)
           mRNA, complete cds
          Length = 3372

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 taaccttatcttcttcatcttc 243
           ||||||||||||||||||||||
Sbjct: 100 taaccttatcttcttcatcttc 121

>gb|AC115622.2| Homo sapiens BAC clone RP11-404I7 from 4, complete sequence
          Length = 164545

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 490   tttttccttatttatatttctt 511
             ||||||||||||||||||||||
Sbjct: 90913 tttttccttatttatatttctt 90934

>gb|AC007170.6| Arabidopsis thaliana chromosome 2 clone T3P4 map mi310, complete
             sequence
          Length = 78568

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 222   taaccttatcttcttcatcttc 243
             ||||||||||||||||||||||
Sbjct: 27862 taaccttatcttcttcatcttc 27841

>gb|AC110751.5| Homo sapiens BAC clone RP13-511C16 from 4, complete sequence
          Length = 138824

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 490   tttttccttatttatatttctt 511
             ||||||||||||||||||||||
Sbjct: 15024 tttttccttatttatatttctt 15045

>gb|AC157814.10| Mus musculus chromosome 3, clone RP24-134L24, complete sequence
          Length = 150033

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 505   atttcttgaaagatttctcca 525
             |||||||||||||||||||||
Sbjct: 98801 atttcttgaaagatttctcca 98781

>gb|AC122169.24| Medicago truncatula clone mth2-9m5, complete sequence
          Length = 125652

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 605   acaccaaaaaccttgtcactgcaat 629
             ||||||||||||||| |||||||||
Sbjct: 16119 acaccaaaaaccttgacactgcaat 16095

>emb|AL139236.10| Human DNA sequence from clone RP11-165K23 on chromosome 10, complete
             sequence
          Length = 123701

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   taaagacaccacagtcaaagt 464
             |||||||||||||||||||||
Sbjct: 61465 taaagacaccacagtcaaagt 61485

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 437      taaagcataaagacaccacagtcaaagtcgttttgctgctgtggaacct 485
                |||||||| |||| |||||||||| | || || | ||||||||||||||
Sbjct: 25670837 taaagcatgaagataccacagtcatactcattcttctgctgtggaacct 25670789

>gb|AC009477.4| Homo sapiens BAC clone RP11-209H16 from 2, complete sequence
          Length = 173071

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 506    tttcttgaaagatttctccat 526
              |||||||||||||||||||||
Sbjct: 146452 tttcttgaaagatttctccat 146432

>dbj|BS000204.1| Pan troglodytes chromosome 22 clone:RP43-139K21, map 22, complete
              sequences
          Length = 148556

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    acagccatcagagacagtgtt 138
              |||||||||||||||||||||
Sbjct: 112534 acagccatcagagacagtgtt 112554

>dbj|BS000115.1| Pan troglodytes chromosome 22 clone:PTB-047E23, map 22, complete
             sequences
          Length = 150496

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   acagccatcagagacagtgtt 138
             |||||||||||||||||||||
Sbjct: 12811 acagccatcagagacagtgtt 12831

>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   acagccatcagagacagtgtt 138
             |||||||||||||||||||||
Sbjct: 77649 acagccatcagagacagtgtt 77669

>emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chromosome 4, complete
              sequence
          Length = 183261

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     ataccgaaaatataagatata 32
              |||||||||||||||||||||
Sbjct: 123602 ataccgaaaatataagatata 123622

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 437      taaagcataaagacaccacagtcaaagtcgttttgctgctgtggaacct 485
                |||||||| |||| |||||||||| | || || | ||||||||||||||
Sbjct: 25599013 taaagcatgaagataccacagtcatactcattcttctgctgtggaacct 25598965

>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 437   taaagcataaagacaccacagtcaaagtcgttttgctgctgtggaacct 485
             |||||||| |||| |||||||||| | || || | ||||||||||||||
Sbjct: 38075 taaagcatgaagataccacagtcatactcattcttctgctgtggaacct 38027

>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 437  taaagcataaagacaccacagtcaaagtcgttttgctgctgtggaacct 485
            |||||||| |||| |||||||||| | || || | ||||||||||||||
Sbjct: 2837 taaagcatgaagataccacagtcatactcattcttctgctgtggaacct 2885

>gb|U41483.1|HSU41483 Human Down Syndrome region of chromosome 21 genomic sequence, clone
           A12H1-2B4
          Length = 3417

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 acagccatcagagacagtgtt 138
           |||||||||||||||||||||
Sbjct: 450 acagccatcagagacagtgtt 470

>dbj|AP000696.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB1572B10,
             CBR1-HLCS region
          Length = 163752

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   acagccatcagagacagtgtt 138
             |||||||||||||||||||||
Sbjct: 14878 acagccatcagagacagtgtt 14898

>dbj|AP000695.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB176G8,
             CBR1-HLCS region
          Length = 100058

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   acagccatcagagacagtgtt 138
             |||||||||||||||||||||
Sbjct: 65363 acagccatcagagacagtgtt 65383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,700,565
Number of Sequences: 3902068
Number of extensions: 7700565
Number of successful extensions: 154382
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154231
Number of HSP's gapped (non-prelim): 148
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)