ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal prot... 280 1e-72
2gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, part... 163 2e-37
3gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA,... 163 2e-37
4ref|XM_651851.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 42 0.51
5emb|X73259.1|DP12GL D.pseudoobscura tumor supression gene 42 0.51
6gb|AC040917.6| Homo sapiens chromosome 8, clone RP11-1M21, compl... 40 2.0
7gb|AF207953.5| Homo sapiens chromosome 8 clone CTA-389B map q21.... 40 2.0
8gb|AC116516.7| Mus musculus chromosome 1, clone RP24-336H7, comp... 38 7.9
9gb|AE006252.1| Lactococcus lactis subsp. lactis IL1403 section 1... 38 7.9
10ref|XM_717786.1| Candida albicans SC5314 hypothetical protein (C... 38 7.9
11ref|XM_717640.1| Candida albicans SC5314 hypothetical protein (C... 38 7.9
12gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 38 7.9
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 7.9
14emb|CR384088.10| Zebrafish DNA sequence from clone CH211-107K4 i... 38 7.9
15gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, com... 38 7.9
16emb|AL132767.7|HSJ819L10 Human DNA sequence from clone RP5-819L1... 38 7.9
17gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.9
18emb|AL604027.9| Mouse DNA sequence from clone RP23-155G20 on chr... 38 7.9
19gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 38 7.9
20gb|AC124608.1| Homo sapiens chromosome 19 clone RP11-620G10, com... 38 7.9
21gb|AC008951.6| Homo sapiens chromosome 5 clone CTD-2337A12, comp... 38 7.9
22gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence 38 7.9
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
26gb|AC008510.9| Homo sapiens chromosome 19 clone CTC-452L11, comp... 38 7.9
27gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, compl... 38 7.9
28dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
29dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
30dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 7.9
31dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
32gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, comple... 38 7.9
33dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
34dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
35emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chr... 38 7.9
36emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4,... 38 7.9
37gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome... 38 7.9
38gb|AC116547.2| Homo sapiens chromosome 8 clone RP11-314C19 map 8... 38 7.9 
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene)
          Length = 852

 Score =  280 bits (141), Expect = 1e-72
 Identities = 160/164 (97%), Gaps = 2/164 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaactttaacattgttgcacgttacattgccatctccatcaaactttcctaaacccag 60
           |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 812 caaaactttaacattgtt-cacgtt-cattgccatctccatcaaactttcctaaacccag 755

                                                                       
Query: 61  gttgttaacaaaactatgtttctggaatacattgatagcacaactaactgaagcatcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gttgttaacaaaactatgtttctggaatacattgatagcacaactaactgaagcatcaac 695

                                                       
Query: 121 caaaacatttggatacgaagatatgaaatggcnacattcaaggc 164
           |||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 694 caaaacatttggatacgaagatatgaaatggagacattcaaggc 651
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>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds
          Length = 392

 Score =  163 bits (82), Expect = 2e-37
 Identities = 148/165 (89%), Gaps = 4/165 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaactttaacattgttgcacgttacattgccatctccatcaaactttcctaaacccag 60
           |||||||||||||||||| |||||| ||||||||||| |||||||||| ||||| |||||
Sbjct: 341 caaaactttaacattgtt-cacgtt-cattgccatcttcatcaaactt-cctaaccccag 285

                                                                       
Query: 61  gttgttaacaaaactatgtttctggaatacattgatagcacaactaactgaagcatcaac 120
            | |||||||||||||||||||||||||||||||||||||||||||||  |  | |||||
Sbjct: 284 atagttaacaaaactatgtttctggaatacattgatagcacaactaaccaagacctcaac 225

                                                        
Query: 121 caaaacatttggat-acgaagatatgaaatggcnacattcaaggc 164
           |||||||||||||| |  ||||||||||||||  |||||||||||
Sbjct: 224 caaaacatttggatcagaaagatatgaaatggagacattcaaggc 180
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>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence
          Length = 393

 Score =  163 bits (82), Expect = 2e-37
 Identities = 148/165 (89%), Gaps = 4/165 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaactttaacattgttgcacgttacattgccatctccatcaaactttcctaaacccag 60
           |||||||||||||||||| |||||| ||||||||||| |||||||||| ||||| |||||
Sbjct: 342 caaaactttaacattgtt-cacgtt-cattgccatcttcatcaaactt-cctaaccccag 286

                                                                       
Query: 61  gttgttaacaaaactatgtttctggaatacattgatagcacaactaactgaagcatcaac 120
            | |||||||||||||||||||||||||||||||||||||||||||||  |  | |||||
Sbjct: 285 atagttaacaaaactatgtttctggaatacattgatagcacaactaaccaagacctcaac 226

                                                        
Query: 121 caaaacatttggat-acgaagatatgaaatggcnacattcaaggc 164
           |||||||||||||| |  ||||||||||||||  |||||||||||
Sbjct: 225 caaaacatttggatcagaaagatatgaaatggagacattcaaggc 181
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>ref|XM_651851.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (6.t00008)
            partial mRNA
          Length = 8574

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 95   atagcacaactaactgaagcatcaa 119
            |||| ||||||||||||||||||||
Sbjct: 3728 ataggacaactaactgaagcatcaa 3704
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>emb|X73259.1|DP12GL D.pseudoobscura tumor supression gene
          Length = 6072

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 3    aaactttaacattgttgcacg 23
            |||||||||||||||||||||
Sbjct: 1337 aaactttaacattgttgcacg 1317
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>gb|AC040917.6| Homo sapiens chromosome 8, clone RP11-1M21, complete sequence
          Length = 158031

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    aaactatgtttctggaatacattg 94
             |||||||||| |||||||||||||
Sbjct: 73158 aaactatgttgctggaatacattg 73181
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>gb|AF207953.5| Homo sapiens chromosome 8 clone CTA-389B map q21.13, complete sequence
          Length = 112288

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    aaactatgtttctggaatacattg 94
             |||||||||| |||||||||||||
Sbjct: 86867 aaactatgttgctggaatacattg 86890
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>gb|AC116516.7| Mus musculus chromosome 1, clone RP24-336H7, complete sequence
          Length = 134253

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   tttggatacgaagatatga 146
             |||||||||||||||||||
Sbjct: 85149 tttggatacgaagatatga 85131
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>gb|AE006252.1| Lactococcus lactis subsp. lactis IL1403 section 14 of 218 of the
             complete genome
          Length = 14267

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    caaaactatgtttctggaa 87
             |||||||||||||||||||
Sbjct: 10432 caaaactatgtttctggaa 10450
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>ref|XM_717786.1| Candida albicans SC5314 hypothetical protein (CaO19_12132), mRNA
          Length = 1836

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   ccatctccatcaaactttc 50
            |||||||||||||||||||
Sbjct: 1342 ccatctccatcaaactttc 1360
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>ref|XM_717640.1| Candida albicans SC5314 hypothetical protein (CaO19_4662), mRNA
          Length = 1836

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 32   ccatctccatcaaactttc 50
            |||||||||||||||||||
Sbjct: 1342 ccatctccatcaaactttc 1360
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      aaaactttaacattgttgc 20
              |||||||||||||||||||
Sbjct: 353719 aaaactttaacattgttgc 353701
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                           
Query: 69       caaaactatg-tttctggaatacattg 94
                |||||||||| ||||||||||||||||
Sbjct: 10371805 caaaactatgatttctggaatacattg 10371779



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                           
Query: 69       caaaactatg-tttctggaatacattg 94
                |||||||||| ||||||||||||||||
Sbjct: 10367549 caaaactatgatttctggaatacattg 10367523
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>emb|CR384088.10| Zebrafish DNA sequence from clone CH211-107K4 in linkage group 15,
            complete sequence
          Length = 156313

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 118  aaccaaaacatttggatac 136
            |||||||||||||||||||
Sbjct: 8064 aaccaaaacatttggatac 8046
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>gb|AC104914.9| Mus musculus chromosome 9, clone RP23-108E20, complete sequence
          Length = 260181

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    ccatcaaactttcctaaac 56
             |||||||||||||||||||
Sbjct: 68172 ccatcaaactttcctaaac 68190
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>emb|AL132767.7|HSJ819L10 Human DNA sequence from clone RP5-819L10 on chromosome 6q12-13,
            complete sequence
          Length = 19597

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 87   atacattgatagcacaact 105
            |||||||||||||||||||
Sbjct: 9941 atacattgatagcacaact 9959
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 69    caaaactatg-tttctggaatacattg 94
             |||||||||| ||||||||||||||||
Sbjct: 28358 caaaactatgatttctggaatacattg 28332



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 69    caaaactatg-tttctggaatacattg 94
             |||||||||| ||||||||||||||||
Sbjct: 24102 caaaactatgatttctggaatacattg 24076
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>emb|AL604027.9| Mouse DNA sequence from clone RP23-155G20 on chromosome 11, complete
             sequence
          Length = 196398

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgttaacaaaactatgttt 81
             |||||||||||||||||||
Sbjct: 58918 tgttaacaaaactatgttt 58936
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 69    caaaactatg-tttctggaatacattg 94
             |||||||||| ||||||||||||||||
Sbjct: 85271 caaaactatgatttctggaatacattg 85245



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 69    caaaactatg-tttctggaatacattg 94
             |||||||||| ||||||||||||||||
Sbjct: 81015 caaaactatgatttctggaatacattg 80989
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>gb|AC124608.1| Homo sapiens chromosome 19 clone RP11-620G10, complete sequence
          Length = 176761

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   tgccatctccatcaaactt 48
            |||||||||||||||||||
Sbjct: 7764 tgccatctccatcaaactt 7782
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>gb|AC008951.6| Homo sapiens chromosome 5 clone CTD-2337A12, complete sequence
          Length = 124151

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    cattgatagcacaactaac 108
             |||||||||||||||||||
Sbjct: 95536 cattgatagcacaactaac 95554
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>gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence
          Length = 164239

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    ttgccatctccatcaaactttcc 51
             ||||||||||||||||| |||||
Sbjct: 28049 ttgccatctccatcaaaatttcc 28071
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     tacattgatagcacaacta 106
              |||||||||||||||||||
Sbjct: 620445 tacattgatagcacaacta 620427
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                           
Query: 69       caaaactatg-tttctggaatacattg 94
                |||||||||| ||||||||||||||||
Sbjct: 10369906 caaaactatgatttctggaatacattg 10369880



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                           
Query: 69       caaaactatg-tttctggaatacattg 94
                |||||||||| ||||||||||||||||
Sbjct: 10365650 caaaactatgatttctggaatacattg 10365624
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 25       tacattgccatctccatca 43
                |||||||||||||||||||
Sbjct: 21522973 tacattgccatctccatca 21522955
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>gb|AC008510.9| Homo sapiens chromosome 19 clone CTC-452L11, complete sequence
          Length = 104999

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     tgccatctccatcaaactt 48
              |||||||||||||||||||
Sbjct: 103160 tgccatctccatcaaactt 103178
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>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence
          Length = 189466

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 34     atctccatcaaactttcct 52
              |||||||||||||||||||
Sbjct: 118499 atctccatcaaactttcct 118481
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    tacattgccatctccatca 43
             |||||||||||||||||||
Sbjct: 11923 tacattgccatctccatca 11905
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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020C11
          Length = 163328

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     tacattgccatctccatca 43
              |||||||||||||||||||
Sbjct: 117900 tacattgccatctccatca 117882
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>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2
          Length = 58527

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 114   catcaaccaaaacatttgg 132
             |||||||||||||||||||
Sbjct: 49312 catcaaccaaaacatttgg 49330
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>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full
           insert sequence
          Length = 966

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                      
Query: 69  caaaactatg-tttctggaatacattg 94
           |||||||||| ||||||||||||||||
Sbjct: 701 caaaactatgatttctggaatacattg 675
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>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence
          Length = 208801

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgttaacaaaactatgttt 81
             |||||||||||||||||||
Sbjct: 62211 tgttaacaaaactatgttt 62229
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>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full
           insert sequence
          Length = 811

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                      
Query: 69  caaaactatg-tttctggaatacattg 94
           |||||||||| ||||||||||||||||
Sbjct: 623 caaaactatgatttctggaatacattg 597
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>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full
           insert sequence
          Length = 830

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                      
Query: 69  caaaactatg-tttctggaatacattg 94
           |||||||||| ||||||||||||||||
Sbjct: 700 caaaactatgatttctggaatacattg 674
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>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete
            sequence
          Length = 180784

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 35   tctccatcaaactttccta 53
            |||||||||||||||||||
Sbjct: 6825 tctccatcaaactttccta 6807
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>emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060M15,
             complete sequence
          Length = 119918

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    tacattgatagcacaacta 106
             |||||||||||||||||||
Sbjct: 11317 tacattgatagcacaacta 11299
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>gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome 16, complete sequence
          Length = 206740

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    tctccatcaaactttccta 53
             |||||||||||||||||||
Sbjct: 39364 tctccatcaaactttccta 39382
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>gb|AC116547.2| Homo sapiens chromosome 8 clone RP11-314C19 map 8q24.2, complete
             sequence
          Length = 166683

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    ttgccatctccatcaaactttcc 51
             ||||||||||||||||| |||||
Sbjct: 49472 ttgccatctccatcaaaatttcc 49494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,491,280
Number of Sequences: 3902068
Number of extensions: 1491280
Number of successful extensions: 111081
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 110880
Number of HSP's gapped (non-prelim): 210
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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