>PCCA_CAEBR (Q612F5) Propionyl-CoA carboxylase alpha chain, mitochondrial|
precursor (EC 6.4.1.3) (PCCase alpha subunit)
(Propanoyl-CoA:carbon dioxide ligase alpha subunit)
Length = 738
Score = 29.3 bits (64), Expect = 9.7
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 401 QSYRTRGDHTASESFSEHILERLFVSNRIHASRNLLMSRLGNAHWGGLCKLNSPRRKKQV 580
+ YR AS + +L F+ N H +L + GNA W + + RR ++V
Sbjct: 240 EGYRLSKQEAASSFGDDRMLVEKFIDNPRHIEMQILCDKHGNALWLNERECSIQRRNQKV 299
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,614,442
Number of Sequences: 219361
Number of extensions: 1754841
Number of successful extensions: 4505
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4504
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)