>PICA_DROME (Q9VI75) Phosphatidylinositol-binding clathrin assembly protein LAP|
           (Like-AP180)
          Length = 468

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 309 IVSLLYMYFKRNRYHAHSALDA----LVSSDHLRTFLTSSTNCALLEGSI 446
           I++LL  YF  N+ HA  ALD     LV  D +  FL  + N  + +G I
Sbjct: 229 IINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGIDKGDI 278

>RBGPR_HUMAN (Q9H2M9) Rab3 GTPase-activating protein non-catalytic subunit (Rab3|
           GTPase-activating protein 150 kDa subunit) (Rab3-GAP
           p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150)
           (RGAP-iso)
          Length = 1393

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
 Frame = -2

Query: 622 STEWDDDDAFVAWREN-PENYQEYIKELRAQRVSQLLSDVADSSP--DLQ--ALPQGLSM 458
           ST+W+D D + AW EN P+  +E     + Q+ S L   V   SP  DL   A  Q    
Sbjct: 41  STDWED-DGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTNDLMVIAREQKAVF 99

Query: 457 LLEKMDPSRRAQFVEEVKKVLK*SDDTNASNAEC 356
           L+ K   S + +  EE++  +  S   N    EC
Sbjct: 100 LVPKWKYSDKGK--EEMQFAVGWSGSLNVEEGEC 131

>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
            Endostatin]
          Length = 1774

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 227  SSNNGRRLQTSFTKQWLTQISYGRLQPNSIPSIYVLQEKPISC--TFCIGCV 376
            S  +GRRL  S+ + W T+ +    Q +S+ S  +L++K  SC  ++ + C+
Sbjct: 1713 SDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLCI 1764

>CYSK2_SCHPO (P87131) Cysteine synthase 2 (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase 2) (O-acetylserine (Thiol)-lyase 2) (CSase
           2)
          Length = 395

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 557 VYQRTQGSKGISVALRCCRL 498
           VY+ T GS GIS+A+ CC L
Sbjct: 108 VYEGTAGSTGISIAMLCCSL 127

>UBR1_HUMAN (Q8IWV7) Ubiquitin-protein ligase E3 component N-recognin-1 (EC|
           6.-.-.-) (Ubiquitin-protein ligase E3-alpha-1)
           (Ubiquitin-protein ligase E3-alpha-I)
          Length = 1749

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = +3

Query: 336 KRNRYHAHSALDALVSSDHLRTFLTSSTNCALLEGSIFSSSIERPCGKACRSGLESATSE 515
           K  RY+     D   S DH+   L  + +C L E  + +++I++   +A ++G  +A  E
Sbjct: 222 KNERYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYAACQE 281

Query: 516 SN*D 527
           +  D
Sbjct: 282 AKED 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,139,780
Number of Sequences: 219361
Number of extensions: 1901874
Number of successful extensions: 5336
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5317
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)