ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23p16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DPNP_ORYSA (Q40639) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.... 76 3e-14
2DPNP1_ARATH (Q42546) SAL1 phosphatase (3'(2'),5'-bisphosphate nu... 52 3e-07
3DPNP3_ARATH (Q8GY63) Probable SAL3 phosphatase (3'(2'),5'-bispho... 46 2e-05
4DPNP2_ARATH (O49623) SAL2 phosphatase (3'(2'),5'-bisphosphate nu... 45 4e-05
5DPNP4_ARATH (Q84VY5) Probable SAL4 phosphatase (3'(2'),5'-bispho... 42 4e-04
6HAL2_CANAL (P46594) Halotolerance protein HAL2 (Fragment) 28 8.1

>DPNP_ORYSA (Q40639) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)|
           (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase)
           (DPNPase)
          Length = 358

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEKSQAPSPL 124
           LDFSKGRFLD+DTGIIATNKQL PSLLK+VQ+AIKE++QA SPL
Sbjct: 315 LDFSKGRFLDLDTGIIATNKQLMPSLLKAVQDAIKEQNQAASPL 358



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>DPNP1_ARATH (Q42546) SAL1 phosphatase (3'(2'),5'-bisphosphate nucleotidase 1)|
           (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside
           3'(2')-phosphohydrolase 1) (DPNPase 1)
           (Inositol-1,4-bisphosphate 1-phosphatase 1) (EC
           3.1.3.57) (Inositol polyphosphate 1-phosphat
          Length = 353

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/40 (57%), Positives = 34/40 (85%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEKSQA 136
           LDFSKG++LD+DTGII  N++L P LLK+V+++I E+ +A
Sbjct: 311 LDFSKGKYLDLDTGIIVANEKLMPLLLKAVRDSIAEQEKA 350



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>DPNP3_ARATH (Q8GY63) Probable SAL3 phosphatase (3'(2'),5'-bisphosphate|
           nucleotidase 3) (EC 3.1.3.7)
           (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase
           3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase
           3) (EC 3.1.3.57) (Inositol polyphosphate 1
          Length = 357

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/39 (51%), Positives = 30/39 (76%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEKSQ 139
           LDFSKG++LD   GI+ T ++L P LL +V+E+IKE+ +
Sbjct: 308 LDFSKGKYLDYKRGIVVTTQKLLPRLLTAVRESIKEEEE 346



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>DPNP2_ARATH (O49623) SAL2 phosphatase (3'(2'),5'-bisphosphate nucleotidase 2)|
           (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside
           3'(2')-phosphohydrolase 2) (DPNPase 2)
           (Inositol-1,4-bisphosphate 1-phosphatase 2) (EC
           3.1.3.57) (Inositol polyphosphate 1-phosphat
          Length = 347

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEKS 142
           LDFSKG++L   TGII T K+L P +LK+V+E+I+E++
Sbjct: 307 LDFSKGKYLAHKTGIIVTTKKLKPWILKAVRESIEEEN 344



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>DPNP4_ARATH (Q84VY5) Probable SAL4 phosphatase (3'(2'),5'-bisphosphate|
           nucleotidase 4) (EC 3.1.3.7)
           (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase
           4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase
           4) (EC 3.1.3.57) (Inositol polyphosphate 1
          Length = 345

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEK 145
           LDFS+G  L+  TGI+ + K L P LLK+++E+I+E+
Sbjct: 299 LDFSRGNHLEHKTGIVVSTKNLMPRLLKAIRESIEEE 335



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>HAL2_CANAL (P46594) Halotolerance protein HAL2 (Fragment)|
          Length = 105

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 255 LDFSKGRFLDVDTGIIATNKQLXPSLLKSVQEAIKEKS 142
           L+F  GR LD   G+IA NK++   ++ +V E  K  +
Sbjct: 66  LNFGNGRTLD-SKGVIAANKEIFDKVIDAVTEIRKSST 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,752,346
Number of Sequences: 219361
Number of extensions: 528686
Number of successful extensions: 963
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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