ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ853842.1| Hordeum vulgare partial mRNA for putative WRKY6 ... 737 0.0
2gb|DQ298186.1| Oryza sativa (japonica cultivar-group) WRKY trans... 82 3e-12
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
4dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
5ref|XM_481213.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
6gb|AY107827.1| Zea mays PCO116939 mRNA sequence 56 2e-04
7gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 48 0.040
8ref|XM_604586.2| PREDICTED: Bos taurus similar to zinc finger, C... 42 2.5
9ref|XM_709769.1| Candida albicans SC5314 putative iron-responsiv... 42 2.5
10ref|XM_709707.1| Candida albicans SC5314 putative iron-responsiv... 42 2.5
11gb|AC116480.10| Mus musculus chromosome 12, clone RP23-398M9, co... 42 2.5
12emb|AL590014.1| Human DNA sequence from clone RP11-449I6 on chro... 42 2.5
13gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complet... 42 2.5
14gb|AC121569.4| Mus musculus BAC clone RP23-228C13 from chromosom... 42 2.5
15gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, c... 42 2.5
16dbj|AP002878.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.5
17gb|BC085127.1| Mus musculus hepatitis B virus x associated prote... 40 9.7
18gb|AY395994.1| Sagittaria tengtsungensis internal transcribed sp... 40 9.7
19gb|AY395993.1| Sagittaria wuyiensis internal transcribed spacer ... 40 9.7
20gb|AY395992.1| Sagittaria lichuanensis internal transcribed spac... 40 9.7
21gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 9.7
22gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosom... 40 9.7
23gb|AC146611.2| Mus musculus BAC clone RP23-57A17 from chromosome... 40 9.7
24gb|AC125323.4| Mus musculus BAC clone RP23-447G3 from chromosome... 40 9.7
25gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosom... 40 9.7
26emb|CR717107.2|CNS0GG9O Tetraodon nigroviridis full-length cDNA 40 9.7
27emb|CR710925.2|CNS0GBI1 Tetraodon nigroviridis full-length cDNA 40 9.7
28emb|AL355343.18| Human DNA sequence from clone RP11-455I14 on ch... 40 9.7
29emb|AL158149.14| Human DNA sequence from clone RP11-208G24 on ch... 40 9.7
30gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell... 40 9.7
31gb|AC107463.5| Homo sapiens BAC clone RP11-553P9 from 4, complet... 40 9.7
32ref|NM_132789.2| Drosophila melanogaster HDAC6 CG6170-RA, transc... 40 9.7
33gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, co... 40 9.7
34dbj|AK133327.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.7
35gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, co... 40 9.7
36gb|AC171275.2| Gallus gallus BAC clone CH261-87A5 from chromosom... 40 9.7
37dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 9.7
38gb|AC019191.4|AC019191 Homo sapiens BAC clone RP11-312H22 from Y... 40 9.7
39dbj|AB210767.1| Ciona intestinalis mRNA for zinc finger protein,... 40 9.7
40gb|AC129600.4| Mus musculus BAC clone RP23-361D7 from chromosome... 40 9.7
41gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 9.7
42gb|BT004866.1| Drosophila melanogaster LD43531 full insert cDNA 40 9.7
43gb|AC148345.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 9.7
44emb|AL928853.14| Mouse DNA sequence from clone RP23-179L7 on chr... 40 9.7
45dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.7
46gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, comple... 40 9.7
47gb|AC154870.4| Monodelphis domestica, clone XX-218A9, complete s... 40 9.7
48gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 9.7
49gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 o... 40 9.7
50emb|AL935167.8| Zebrafish DNA sequence from clone CH211-186G6 in... 40 9.7
51dbj|AK114472.1| Ciona intestinalis cDNA, clone:cieg003h23, full ... 40 9.7
52gb|AC139331.5| Mus musculus BAC clone RP24-189J10 from 1, comple... 40 9.7
53gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, comple... 40 9.7
54emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, ... 40 9.7
55emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chr... 40 9.7
56emb|AL132651.2|DMC103E12 Drosophila melanogaster cosmid clone 10... 40 9.7 
>emb|AJ853842.1| Hordeum vulgare partial mRNA for putative WRKY6 protein
          Length = 564

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Minus

                                                                       
Query: 336 ctaacccaacaacagctcacgtaaccaataaatataaataacacaaactaatgcattagt 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctaacccaacaacagctcacgtaaccaataaatataaataacacaaactaatgcattagt 505

                                                                       
Query: 396 tgaatcgaacctatcctcgcaaatcaattgttttggacaggaactgctgcagaagtatct 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaatcgaacctatcctcgcaaatcaattgttttggacaggaactgctgcagaagtatct 445

                                                                       
Query: 456 ttcaggagggaattcttcaggccgtctggattaattttcatgctgtgcagagtttgtgca 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcaggagggaattcttcaggccgtctggattaattttcatgctgtgcagagtttgtgca 385

                                                                       
Query: 516 ctctctggtggcttcttacctccaagttctaaagtcgtatccattgtagactcactgtca 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctctggtggcttcttacctccaagttctaaagtcgtatccattgtagactcactgtca 325

                                                                       
Query: 576 gcagccttctctgtgctggttggaagcttctgatctgatgttgaagacactattctggat 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagccttctctgtgctggttggaagcttctgatctgatgttgaagacactattctggat 265

                                                                       
Query: 636 tgctctgtgattgtcattgctggggtgatcacagagacggattcgttccttgattcgttg 695
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgctctgtgattgtcattgctggggtgatcacagagacggattcgttccttgattcgttg 205

                       
Query: 696 ctgcttctaaaa 707
           ||||||||||||
Sbjct: 204 ctgcttctaaaa 193
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>gb|DQ298186.1| Oryza sativa (japonica cultivar-group) WRKY transcription factor 82
            mRNA, complete cds
          Length = 2098

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 111/133 (83%), Gaps = 1/133 (0%)
 Strand = Plus / Minus

                                                                        
Query: 369  ataaataacacaaactaatgcattagttgaatcgaacctatcctcgcaa-atcaattgtt 427
            ||||||| ||||||||||| ||||| | ||||| | |||| |||| ||  ||||||| ||
Sbjct: 1807 ataaataccacaaactaatacattaatcgaatcaaccctaacctcacaggatcaattatt 1748

                                                                        
Query: 428  ttggacaggaactgctgcagaagtatctttcaggagggaattcttcaggccgtctggatt 487
            ||||||||||||| | || ||||||||||||| ||||| |||||||| | | || |||||
Sbjct: 1747 ttggacaggaactaccgcggaagtatctttcaagagggtattcttcatgtcatcgggatt 1688

                         
Query: 488  aattttcatgctg 500
            | |||| ||||||
Sbjct: 1687 agttttaatgctg 1675



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 90/106 (84%), Gaps = 6/106 (5%)
 Strand = Plus / Minus

                                                                        
Query: 164  gttgcttagcctcag-aggcgatacaatacctatacacggta-aggattggaaatctata 221
            ||||||||||||||| | |||||||| |||||||||||  ||  || ||||| |||||||
Sbjct: 1991 gttgcttagcctcagtaagcgatacagtacctatacacactaggggtttggagatctata 1932

                                                          
Query: 222  caa-agggacaactgtaagtttcatcatggcttcctgaacctagat 266
            |||  |||||||||||||||   |||||||||||| || |||||||
Sbjct: 1931 caagggggacaactgtaagt---atcatggcttcccgagcctagat 1889
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 111/133 (83%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                            
Query: 369      ataaataacacaaactaatgcattagttgaatcgaacctatcctcgcaa-atcaattgtt 427
                ||||||| ||||||||||| ||||| | ||||| | |||| |||| ||  ||||||| ||
Sbjct: 10627585 ataaataccacaaactaatacattaatcgaatcaaccctaacctcacaggatcaattatt 10627644

                                                                            
Query: 428      ttggacaggaactgctgcagaagtatctttcaggagggaattcttcaggccgtctggatt 487
                ||||||||||||| | || ||||||||||||| ||||| |||||||| | | || |||||
Sbjct: 10627645 ttggacaggaactaccgcggaagtatctttcaagagggtattcttcatgtcatcgggatt 10627704

                             
Query: 488      aattttcatgctg 500
                | |||| ||||||
Sbjct: 10627705 agttttaatgctg 10627717



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 90/106 (84%), Gaps = 6/106 (5%)
 Strand = Plus / Plus

                                                                            
Query: 164      gttgcttagcctcag-aggcgatacaatacctatacacggtaaggatt-ggaaatctata 221
                ||||||||||||||| | |||||||| |||||||||||  || || || ||| |||||||
Sbjct: 10627401 gttgcttagcctcagtaagcgatacagtacctatacacactaggggtttggagatctata 10627460

                                                              
Query: 222      caaaggg-acaactgtaagtttcatcatggcttcctgaacctagat 266
                ||| ||| ||||||||||||   |||||||||||| || |||||||
Sbjct: 10627461 caagggggacaactgtaagt---atcatggcttcccgagcctagat 10627503
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>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F05
          Length = 134247

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 111/133 (83%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                         
Query: 369   ataaataacacaaactaatgcattagttgaatcgaacctatcctcgcaa-atcaattgtt 427
             ||||||| ||||||||||| ||||| | ||||| | |||| |||| ||  ||||||| ||
Sbjct: 55225 ataaataccacaaactaatacattaatcgaatcaaccctaacctcacaggatcaattatt 55284

                                                                         
Query: 428   ttggacaggaactgctgcagaagtatctttcaggagggaattcttcaggccgtctggatt 487
             ||||||||||||| | || ||||||||||||| ||||| |||||||| | | || |||||
Sbjct: 55285 ttggacaggaactaccgcggaagtatctttcaagagggtattcttcatgtcatcgggatt 55344

                          
Query: 488   aattttcatgctg 500
             | |||| ||||||
Sbjct: 55345 agttttaatgctg 55357



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 90/106 (84%), Gaps = 6/106 (5%)
 Strand = Plus / Plus

                                                                         
Query: 164   gttgcttagcctcag-aggcgatacaatacctatacacggtaaggatt-ggaaatctata 221
             ||||||||||||||| | |||||||| |||||||||||  || || || ||| |||||||
Sbjct: 55041 gttgcttagcctcagtaagcgatacagtacctatacacactaggggtttggagatctata 55100

                                                           
Query: 222   caaaggg-acaactgtaagtttcatcatggcttcctgaacctagat 266
             ||| ||| ||||||||||||   |||||||||||| || |||||||
Sbjct: 55101 caagggggacaactgtaagt---atcatggcttcccgagcctagat 55143
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>ref|XM_481213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1650

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                        
Query: 419  tcaattgttttggacaggaactgctgcagaagtatctttcaggagggaattcttcaggcc 478
            |||||| ||||||||||||||| | || ||||||||||||| ||||| |||||||| | |
Sbjct: 1650 tcaattattttggacaggaactaccgcggaagtatctttcaagagggtattcttcatgtc 1591

                                  
Query: 479  gtctggattaattttcatgctg 500
             || |||||| |||| ||||||
Sbjct: 1590 atcgggattagttttaatgctg 1569
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>gb|AY107827.1| Zea mays PCO116939 mRNA sequence
          Length = 590

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 419 tcaattgttttggacaggaactgctgcagaagtatctttcagga 462
           ||||||||||||||| |||||||| |||||||| || |||||||
Sbjct: 285 tcaattgttttggactggaactgcagcagaagtttccttcagga 242
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>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 448    aagtatctttcaggagggaattct 471
              ||||||||||||||||||||||||
Sbjct: 114499 aagtatctttcaggagggaattct 114476
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>ref|XM_604586.2| PREDICTED: Bos taurus similar to zinc finger, CCHC domain
           containing 5 (LOC526223), mRNA
          Length = 504

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 65  tgaatccatcatatctcagat 85
           |||||||||||||||||||||
Sbjct: 106 tgaatccatcatatctcagat 86
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>ref|XM_709769.1| Candida albicans SC5314 putative iron-responsive transcriptional
            activator (CaO19.2272), mRNA
          Length = 2397

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 60   acaaatgaatccatcatatct 80
            |||||||||||||||||||||
Sbjct: 1247 acaaatgaatccatcatatct 1227
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>ref|XM_709707.1| Candida albicans SC5314 putative iron-responsive transcriptional
            activator (CaO19.9812), mRNA
          Length = 2397

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 60   acaaatgaatccatcatatct 80
            |||||||||||||||||||||
Sbjct: 1247 acaaatgaatccatcatatct 1227
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>gb|AC116480.10| Mus musculus chromosome 12, clone RP23-398M9, complete sequence
          Length = 194708

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 363   ataaatataaataacacaaactaat 387
             |||||||||||||| ||||||||||
Sbjct: 36397 ataaatataaataagacaaactaat 36373
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>emb|AL590014.1| Human DNA sequence from clone RP11-449I6 on chromosome 6 Contains part
             of the EPB41L2 gene for erythrocyte membrane protein band
             4.1-like 2, complete sequence
          Length = 42959

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 54    ataacaacaaatgaatccatcatat 78
             |||| ||||||||||||||||||||
Sbjct: 41734 ataaaaacaaatgaatccatcatat 41710
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>gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complete sequence
          Length = 210563

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 497    gctgtgcagagtttgtgcact 517
              |||||||||||||||||||||
Sbjct: 162472 gctgtgcagagtttgtgcact 162452
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>gb|AC121569.4| Mus musculus BAC clone RP23-228C13 from chromosome 12, complete
             sequence
          Length = 171710

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 363   ataaatataaataacacaaactaat 387
             |||||||||||||| ||||||||||
Sbjct: 34242 ataaatataaataagacaaactaat 34266
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>gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, complete sequence
          Length = 179111

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 363   ataaatataaataacacaaactaat 387
             |||||||||||||| ||||||||||
Sbjct: 31923 ataaatataaataagacaaactaat 31947
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>dbj|AP002878.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-685I24, complete
             sequence
          Length = 108000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 54    ataacaacaaatgaatccatcatat 78
             |||||||||||||||| ||||||||
Sbjct: 16435 ataacaacaaatgaatacatcatat 16411
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>gb|BC085127.1| Mus musculus hepatitis B virus x associated protein, mRNA (cDNA clone
            MGC:90806 IMAGE:6853428), complete cds
          Length = 5772

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 361  caataaatataaataacacaaact 384
            ||||||||||||||| ||||||||
Sbjct: 3007 caataaatataaatagcacaaact 3030
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>gb|AY395994.1| Sagittaria tengtsungensis internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 706

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 657 ggggtgatcacagagacgga 676
           ||||||||||||||||||||
Sbjct: 639 ggggtgatcacagagacgga 620
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>gb|AY395993.1| Sagittaria wuyiensis internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 722

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 657 ggggtgatcacagagacgga 676
           ||||||||||||||||||||
Sbjct: 650 ggggtgatcacagagacgga 631
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>gb|AY395992.1| Sagittaria lichuanensis internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 740

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 657 ggggtgatcacagagacgga 676
           ||||||||||||||||||||
Sbjct: 669 ggggtgatcacagagacgga 650
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>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   gtaaccaataaatataaata 375
             ||||||||||||||||||||
Sbjct: 45357 gtaaccaataaatataaata 45338
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>gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosome 5, complete sequence
          Length = 170401

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    ataaatataaataacacaaa 382
              ||||||||||||||||||||
Sbjct: 161436 ataaatataaataacacaaa 161417
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>gb|AC146611.2| Mus musculus BAC clone RP23-57A17 from chromosome 5, complete sequence
          Length = 194487

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    ataaatataaataacacaaa 382
              ||||||||||||||||||||
Sbjct: 115933 ataaatataaataacacaaa 115952
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>gb|AC125323.4| Mus musculus BAC clone RP23-447G3 from chromosome 7, complete sequence
          Length = 174405

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 361    caataaatataaataacacaaact 384
              ||||||||||||||| ||||||||
Sbjct: 133309 caataaatataaatagcacaaact 133286
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>gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosome 8, complete sequence
          Length = 162027

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    gattggaaatctatacaaag 226
              ||||||||||||||||||||
Sbjct: 155645 gattggaaatctatacaaag 155626
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>emb|CR717107.2|CNS0GG9O Tetraodon nigroviridis full-length cDNA
          Length = 614

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 ccaataaatataaataacac 379
           ||||||||||||||||||||
Sbjct: 240 ccaataaatataaataacac 259
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>emb|CR710925.2|CNS0GBI1 Tetraodon nigroviridis full-length cDNA
          Length = 491

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 ccaataaatataaataacac 379
           ||||||||||||||||||||
Sbjct: 243 ccaataaatataaataacac 262
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>emb|AL355343.18| Human DNA sequence from clone RP11-455I14 on chromosome 6 Contains the 5'
              end of the TIAM2 gene for T-cell lymphoma invasion and
              metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)),
              complete sequence
          Length = 179262

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 599    aagcttctgatctgatgttg 618
              ||||||||||||||||||||
Sbjct: 123217 aagcttctgatctgatgttg 123198
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>emb|AL158149.14| Human DNA sequence from clone RP11-208G24 on chromosome 9 Contains the
             GAS1 gene for growth arrest-specific 1, the 5' end of a
             novel gene and a CpG island, complete sequence
          Length = 102100

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   gtaaccaataaatataaata 375
             ||||||||||||||||||||
Sbjct: 48393 gtaaccaataaatataaata 48412
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>gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169557

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aacaacaaatgaatccatca 75
             ||||||||||||||||||||
Sbjct: 21861 aacaacaaatgaatccatca 21842
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>gb|AC107463.5| Homo sapiens BAC clone RP11-553P9 from 4, complete sequence
          Length = 93661

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   aaataacacaaactaatgcattag 394
             |||||||||||| |||||||||||
Sbjct: 25993 aaataacacaaaataatgcattag 25970
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>ref|NM_132789.2| Drosophila melanogaster HDAC6 CG6170-RA, transcript variant A
           (HDAC6), mRNA
          Length = 4833

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 gtaaccaataaatataaata 375
           ||||||||||||||||||||
Sbjct: 877 gtaaccaataaatataaata 896
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>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence
          Length = 161586

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    aaatctatacaaagggacaa 232
              ||||||||||||||||||||
Sbjct: 156955 aaatctatacaaagggacaa 156936
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>dbj|AK133327.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932433H19 product:unclassifiable, full
           insert sequence
          Length = 3351

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 569 actgtcagcagccttctctg 588
           ||||||||||||||||||||
Sbjct: 578 actgtcagcagccttctctg 559
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>gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, complete sequence
          Length = 207888

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   aaatctatacaaagggacaa 232
             ||||||||||||||||||||
Sbjct: 61764 aaatctatacaaagggacaa 61745
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>gb|AC171275.2| Gallus gallus BAC clone CH261-87A5 from chromosome ul, complete
             sequence
          Length = 206820

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   tacagctaaagagaactcca 138
             ||||||||||||||||||||
Sbjct: 48874 tacagctaaagagaactcca 48855
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    gtaaccaataaatataaata 375
              ||||||||||||||||||||
Sbjct: 765095 gtaaccaataaatataaata 765114
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>gb|AC019191.4|AC019191 Homo sapiens BAC clone RP11-312H22 from Y, complete sequence
          Length = 28344

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   attcttcaggccgtctggat 486
             ||||||||||||||||||||
Sbjct: 27493 attcttcaggccgtctggat 27512
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>dbj|AB210767.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: ciem819h05
          Length = 1337

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 510 tgtgcactctctggtggcttctta 533
           |||| |||||||||||||||||||
Sbjct: 591 tgtgaactctctggtggcttctta 568
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>gb|AC129600.4| Mus musculus BAC clone RP23-361D7 from chromosome 5, complete sequence
          Length = 223491

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   ataaatataaataacacaaa 382
             ||||||||||||||||||||
Sbjct: 30967 ataaatataaataacacaaa 30948
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   ataaatataaataacacaaa 382
             ||||||||||||||||||||
Sbjct: 63118 ataaatataaataacacaaa 63099
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>gb|BT004866.1| Drosophila melanogaster LD43531 full insert cDNA
          Length = 4503

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 gtaaccaataaatataaata 375
           ||||||||||||||||||||
Sbjct: 522 gtaaccaataaatataaata 541
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>gb|AC148345.3| Medicago truncatula chromosome 7 BAC clone mth2-14a16, complete
             sequence
          Length = 105328

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   aataaatataaataacacaa 381
             ||||||||||||||||||||
Sbjct: 64723 aataaatataaataacacaa 64742
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>emb|AL928853.14| Mouse DNA sequence from clone RP23-179L7 on chromosome 2, complete
             sequence
          Length = 63216

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   aactaatgcattagttgaat 400
             ||||||||||||||||||||
Sbjct: 49310 aactaatgcattagttgaat 49291
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>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   ataaatataaataacacaaactaa 386
             ||||| ||||||||||||||||||
Sbjct: 47437 ataaacataaataacacaaactaa 47460
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>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence
          Length = 173474

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    actgtcagcagccttctctg 588
              ||||||||||||||||||||
Sbjct: 110876 actgtcagcagccttctctg 110895
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>gb|AC154870.4| Monodelphis domestica, clone XX-218A9, complete sequence
          Length = 133508

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 613    atgttgaagacactattctggatt 636
              ||||||||||||||||| ||||||
Sbjct: 109167 atgttgaagacactattttggatt 109144
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    gtaaccaataaatataaata 375
              ||||||||||||||||||||
Sbjct: 270384 gtaaccaataaatataaata 270403
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>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete
              sequence
          Length = 306598

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aacaacaaatgaatccatca 75
              ||||||||||||||||||||
Sbjct: 246245 aacaacaaatgaatccatca 246264
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>emb|AL935167.8| Zebrafish DNA sequence from clone CH211-186G6 in linkage group 16,
             complete sequence
          Length = 137333

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   ctgatctgatgttgaagaca 624
             ||||||||||||||||||||
Sbjct: 74415 ctgatctgatgttgaagaca 74434
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>dbj|AK114472.1| Ciona intestinalis cDNA, clone:cieg003h23, full insert sequence
          Length = 1348

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 510 tgtgcactctctggtggcttctta 533
           |||| |||||||||||||||||||
Sbjct: 574 tgtgaactctctggtggcttctta 551
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>gb|AC139331.5| Mus musculus BAC clone RP24-189J10 from 1, complete sequence
          Length = 164850

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   tataaataacacaaactaat 387
             ||||||||||||||||||||
Sbjct: 95759 tataaataacacaaactaat 95740
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>gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, complete sequence
          Length = 212010

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   caataaatataaataacacaaact 384
             ||||||||||||||| ||||||||
Sbjct: 90583 caataaatataaatagcacaaact 90606
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>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence
          Length = 198052

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    taaccaataaatataaataa 376
              ||||||||||||||||||||
Sbjct: 118513 taaccaataaatataaataa 118532
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>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete
              sequence
          Length = 186882

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    aactaatgcattagttgaat 400
              ||||||||||||||||||||
Sbjct: 119203 aactaatgcattagttgaat 119222
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>emb|AL132651.2|DMC103E12 Drosophila melanogaster cosmid clone 103E12
          Length = 42095

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aacaacaaatgaatccatca 75
             ||||||||||||||||||||
Sbjct: 40960 aacaacaaatgaatccatca 40979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,769,667
Number of Sequences: 3902068
Number of extensions: 6769667
Number of successful extensions: 143515
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143335
Number of HSP's gapped (non-prelim): 168
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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