>gb|AC148004.3| Mus musculus BAC clone RP23-352J18 from chromosome 18, complete
             sequence
          Length = 206275

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    aagaaaattagcacacaccct 91
             |||||||||||||||||||||
Sbjct: 86610 aagaaaattagcacacaccct 86630

>gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, complete sequence
          Length = 149461

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    aagaaaattagcacacaccct 91
             |||||||||||||||||||||
Sbjct: 11764 aagaaaattagcacacaccct 11784

>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14,
             complete sequence
          Length = 160671

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    tgccaaagaaaattagcacac 86
             |||||||||||||||||||||
Sbjct: 80647 tgccaaagaaaattagcacac 80667

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttgccaaagaaaattagcac 84
                ||||||||||||||||||||
Sbjct: 34130858 ttgccaaagaaaattagcac 34130839

>gb|AC161257.2| Mus musculus BAC clone RP24-91A16 from chromosome 9, complete sequence
          Length = 245088

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    tctcaggctttcgcattagcactc 36
             |||||||||||| |||||||||||
Sbjct: 22520 tctcaggctttcccattagcactc 22497

>gb|AC117248.3| Mus musculus BAC clone RP24-345A14 from chromosome 9, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    tctcaggctttcgcattagcactc 36
             |||||||||||| |||||||||||
Sbjct: 73038 tctcaggctttcccattagcactc 73061

>gb|AC068467.7| Homo sapiens chromosome 8, clone RP11-643F5, complete sequence
          Length = 185895

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   aatagttgccaaagaaaatt 79
            ||||||||||||||||||||
Sbjct: 9186 aatagttgccaaagaaaatt 9205

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttgccaaagaaaattagcac 84
                ||||||||||||||||||||
Sbjct: 34221330 ttgccaaagaaaattagcac 34221311

>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gtcagaggaaaatgccatct 176
             ||||||||||||||||||||
Sbjct: 32569 gtcagaggaaaatgccatct 32588

>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttgccaaagaaaattagcac 84
             ||||||||||||||||||||
Sbjct: 94670 ttgccaaagaaaattagcac 94651

>gb|CP000015.1| Borrelia garinii PBi plasmid lp54, complete sequence
          Length = 55560

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    ctttgccacaatagttgcc 69
             |||||||||||||||||||
Sbjct: 54595 ctttgccacaatagttgcc 54577

>emb|AL354999.17| Human DNA sequence from clone RP11-531B22 on chromosome 13, complete
             sequence
          Length = 82944

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 131   tgggagaatgtcatatagt 149
             |||||||||||||||||||
Sbjct: 44133 tgggagaatgtcatatagt 44151

>gb|AC011597.27| Homo sapiens 3 BAC RP11-85F14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 190069

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    aaaattagcacacaccctc 92
             |||||||||||||||||||
Sbjct: 15447 aaaattagcacacaccctc 15465

>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence
          Length = 155742

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    ctacagcctttgccacaat 62
             |||||||||||||||||||
Sbjct: 64718 ctacagcctttgccacaat 64700

>gb|AC011031.12| Homo sapiens chromosome 8, clone RP11-345I19, complete sequence
          Length = 183771

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     aatagttgccaaagaaaat 78
              |||||||||||||||||||
Sbjct: 151322 aatagttgccaaagaaaat 151304

>gb|AC110998.4| Homo sapiens chromosome 8, clone RP11-409C19, complete sequence
          Length = 147364

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 60   aatagttgccaaagaaaat 78
            |||||||||||||||||||
Sbjct: 6505 aatagttgccaaagaaaat 6487

>gb|AC146761.6| Pan troglodytes clone ptb-54f16, complete sequence
          Length = 153907

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 84     cacaccctcaaaggtgcca 102
              |||||||||||||||||||
Sbjct: 103866 cacaccctcaaaggtgcca 103884

>gb|AC008795.7| Homo sapiens chromosome 5 clone CTD-2052F19, complete sequence
          Length = 113750

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    ctacagcctttgccacaat 62
             |||||||||||||||||||
Sbjct: 29148 ctacagcctttgccacaat 29166

>emb|BX005032.10| Zebrafish DNA sequence from clone CH211-180P9 in linkage group 16,
            complete sequence
          Length = 155001

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 154  atggtcagaggaaaatgccatct 176
            ||||||||||||||||| |||||
Sbjct: 2898 atggtcagaggaaaatgacatct 2876

>gb|AC013448.7| Homo sapiens BAC clone RP11-551D18 from 2, complete sequence
          Length = 129553

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    aaagaaaattagcacacac 88
             |||||||||||||||||||
Sbjct: 93899 aaagaaaattagcacacac 93917

>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence
          Length = 210558

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 159    cagaggaaaatgccatctg 177
              |||||||||||||||||||
Sbjct: 116356 cagaggaaaatgccatctg 116338

>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete
             sequences
          Length = 201304

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 50    cctttgccacaatagttgccaaagaaa 76
             ||||||||||||||  |||||||||||
Sbjct: 14272 cctttgccacaatatctgccaaagaaa 14298

>dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, map 22, complete
             sequences
          Length = 155086

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 50    cctttgccacaatagttgccaaagaaa 76
             ||||||||||||||  |||||||||||
Sbjct: 60912 cctttgccacaatatctgccaaagaaa 60938

>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 50     cctttgccacaatagttgccaaagaaa 76
              ||||||||||||||  |||||||||||
Sbjct: 169530 cctttgccacaatatctgccaaagaaa 169556

>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence
          Length = 240321

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    tgccaaagaaaattagcac 84
             |||||||||||||||||||
Sbjct: 71712 tgccaaagaaaattagcac 71730

>emb|AL845290.7| Mouse DNA sequence from clone RP23-201A19 on chromosome 2, complete
             sequence
          Length = 146005

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    ttgccaaagaaaattagca 83
             |||||||||||||||||||
Sbjct: 99972 ttgccaaagaaaattagca 99954

>dbj|AP000352.2| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1561E1
          Length = 152244

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    cacaccctcaaaggtgcca 102
             |||||||||||||||||||
Sbjct: 62615 cacaccctcaaaggtgcca 62597

>dbj|AP000337.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region,
             clone:T1957, complete sequence
          Length = 53553

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 50    cctttgccacaatagttgccaaagaaa 76
             ||||||||||||||  |||||||||||
Sbjct: 47801 cctttgccacaatatctgccaaagaaa 47827

>dbj|AP000216.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone
             f27E1-T1136, segment 2/4, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 50    cctttgccacaatagttgccaaagaaa 76
             ||||||||||||||  |||||||||||
Sbjct: 10071 cctttgccacaatatctgccaaagaaa 10097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,524,837
Number of Sequences: 3902068
Number of extensions: 1524837
Number of successful extensions: 98270
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98177
Number of HSP's gapped (non-prelim): 93
length of query: 190
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 168
effective length of database: 17,147,199,772
effective search space: 2880729561696
effective search space used: 2880729561696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)