ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550395.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
3dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
4dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
5dbj|AK120377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
6dbj|AK061954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
7gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosom... 42 2.1
8gb|AY133429.1| Uncultured bacterium clone BB2_173 16S ribosomal ... 42 2.1
9emb|CR550308.6| Zebrafish DNA sequence from clone DKEY-14F20 in ... 42 2.1
10gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 42 2.1
11ref|XM_476070.1| Oryza sativa (japonica cultivar-group), predic... 40 8.4
12gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, com... 40 8.4
13gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome ... 40 8.4
14gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosom... 40 8.4
15gb|AF419672.1| Uncultured bacterium a2b032 16S ribosomal RNA gen... 40 8.4
16gb|AC144408.3| Mus musculus BAC clone RP24-326P8 from chromosome... 40 8.4
17gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosom... 40 8.4
18gb|AC114818.4| Mus musculus BAC clone RP23-47O11 from 8, complet... 40 8.4
19gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 8.4
20gb|AC073347.3| Homo sapiens BAC clone RP11-775L16 from 7, comple... 40 8.4
21gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete ... 40 8.4
22emb|AL160290.15| Human DNA sequence from clone RP11-338O1 on chr... 40 8.4
23gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, comp... 40 8.4
24gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Can... 40 8.4
25emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chr... 40 8.4
26gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
27gb|AC164165.2| Mus musculus BAC clone RP23-145F16 from chromosom... 40 8.4
28gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 8.4
29gb|DQ416321.1| Uncultured bacterium clone s2uc26 16S ribosomal R... 40 8.4
30dbj|AK124176.1| Homo sapiens cDNA FLJ42182 fis, clone THYMU2031847 40 8.4
31gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 40 8.4
32gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11... 40 8.4
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
34gb|AC026770.6|AC026770 Homo sapiens chromosome 15 clone CTD-2308... 40 8.4
35gb|AF351227.1| Uncultured beta proteobacterium clone 4-4 16S rib... 40 8.4
36gb|AF351226.1| Uncultured gamma proteobacterium clone 4-3 16S ri... 40 8.4
37emb|BX294900.1|CNS09SB9 Uncultured planctomycete partial 16S rRN... 40 8.4
38gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, comple... 40 8.4
39emb|CR938722.3| Pig DNA sequence from clone CH242-150C11 on chro... 40 8.4
40gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
41dbj|AB045320.1| Homo sapiens genomic DNA, chromosome 10q25-q26, ... 40 8.4 
>ref|XM_550395.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2715

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                        
Query: 471  tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
            |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 2300 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 2241

                                                                        
Query: 531  cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
            |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 2240 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 2181

                                       
Query: 591  cctcgtgataagattctgagcatcctc 617
            ||| | |||||||||||||||||||||
Sbjct: 2180 cctagagataagattctgagcatcctc 2154
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                           
Query: 471     tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
               |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 4207971 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 4208030

                                                                           
Query: 531     cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
               |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 4208031 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 4208090

                                          
Query: 591     cctcgtgataagattctgagcatcctc 617
               ||| | |||||||||||||||||||||
Sbjct: 4208091 cctagagataagattctgagcatcctc 4208117
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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                         
Query: 471   tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
             |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 45938 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 45997

                                                                         
Query: 531   cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
             |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 45998 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 46057

                                        
Query: 591   cctcgtgataagattctgagcatcctc 617
             ||| | |||||||||||||||||||||
Sbjct: 46058 cctagagataagattctgagcatcctc 46084
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406H10
          Length = 156419

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                          
Query: 471    tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
              |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 154942 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 155001

                                                                          
Query: 531    cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
              |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 155002 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 155061

                                         
Query: 591    cctcgtgataagattctgagcatcctc 617
              ||| | |||||||||||||||||||||
Sbjct: 155062 cctagagataagattctgagcatcctc 155088
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>dbj|AK120377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071N06, full
            insert sequence
          Length = 2715

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                        
Query: 471  tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
            |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 2300 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 2241

                                                                        
Query: 531  cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
            |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 2240 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 2181

                                       
Query: 591  cctcgtgataagattctgagcatcctc 617
            ||| | |||||||||||||||||||||
Sbjct: 2180 cctagagataagattctgagcatcctc 2154
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>dbj|AK061954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F06, full
            insert sequence
          Length = 1411

 Score =  149 bits (75), Expect = 1e-32
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                        
Query: 471  tttctgggatttgcttgcactaatctgccttcttagacgcaacatctcacccttcgctaa 530
            |||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1068 tttctgtgatctgcttgtactaatctgccttcttaggcgcaatatctcaccctttgctaa 1009

                                                                        
Query: 531  cgccagttcctcttcgaggtgcctagacctcatttcaaaagtctccctttctgtctgaag 590
            |||||  |||||||| || || |||| ||||||||||||| ||||| | || ||||||||
Sbjct: 1008 cgccaactcctcttcaagatgtctagccctcatttcaaaactctccttctcagtctgaag 949

                                       
Query: 591  cctcgtgataagattctgagcatcctc 617
            ||| | |||||||||||||||||||||
Sbjct: 948  cctagagataagattctgagcatcctc 922
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>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete
             sequence
          Length = 199646

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 563   tttcaaaagtctccctttctg 583
             |||||||||||||||||||||
Sbjct: 60113 tttcaaaagtctccctttctg 60133
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>gb|AY133429.1| Uncultured bacterium clone BB2_173 16S ribosomal RNA gene, partial
           sequence
          Length = 1013

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 468 tgttttctgggatttgcttgc 488
           |||||||||||||||||||||
Sbjct: 781 tgttttctgggatttgcttgc 761
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>emb|CR550308.6| Zebrafish DNA sequence from clone DKEY-14F20 in linkage group 8,
             complete sequence
          Length = 137439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   taaacaaaatgaaaggaagat 206
             |||||||||||||||||||||
Sbjct: 61483 taaacaaaatgaaaggaagat 61503
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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    actaaacaaaatgaaaggaag 204
              |||||||||||||||||||||
Sbjct: 202046 actaaacaaaatgaaaggaag 202026
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>ref|XM_476070.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1971

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 598  ataagattctgagcatcctc 617
            ||||||||||||||||||||
Sbjct: 1691 ataagattctgagcatcctc 1672
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>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aaatagcactgaaatgatta 145
              ||||||||||||||||||||
Sbjct: 126617 aaatagcactgaaatgatta 126636
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>gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome 14, complete sequence
          Length = 212100

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaccctcaaattctcaaaac 68
              ||||||||||||||||||||
Sbjct: 152262 aaccctcaaattctcaaaac 152281
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>gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosome 14, complete
             sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaccctcaaattctcaaaac 68
             ||||||||||||||||||||
Sbjct: 74157 aaccctcaaattctcaaaac 74176
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>gb|AF419672.1| Uncultured bacterium a2b032 16S ribosomal RNA gene, partial sequence
          Length = 1481

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  gttttctgggatttgcttgc 488
            ||||||||||||||||||||
Sbjct: 1259 gttttctgggatttgcttgc 1240
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>gb|AC144408.3| Mus musculus BAC clone RP24-326P8 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ccttttcctctcctagcctt 272
             ||||||||||||||||||||
Sbjct: 22108 ccttttcctctcctagcctt 22127
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>gb|AC126053.3| Mus musculus BAC clone RP23-280L21 from chromosome 16, complete
             sequence
          Length = 217131

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ccttttcctctcctagcctt 272
             ||||||||||||||||||||
Sbjct: 33332 ccttttcctctcctagcctt 33313
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>gb|AC114818.4| Mus musculus BAC clone RP23-47O11 from 8, complete sequence
          Length = 100405

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   aaaagtctccctttctgtct 586
             ||||||||||||||||||||
Sbjct: 47124 aaaagtctccctttctgtct 47105
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>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aaaatgaaaggaagatggct 210
             ||||||||||||||||||||
Sbjct: 91650 aaaatgaaaggaagatggct 91631
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>gb|AC073347.3| Homo sapiens BAC clone RP11-775L16 from 7, complete sequence
          Length = 197144

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    tctgggagcagtgctggttt 436
              ||||||||||||||||||||
Sbjct: 172267 tctgggagcagtgctggttt 172248
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>gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete sequence
          Length = 121026

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    actaaacaaaatgaaaggaa 203
              ||||||||||||||||||||
Sbjct: 103660 actaaacaaaatgaaaggaa 103641
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>emb|AL160290.15| Human DNA sequence from clone RP11-338O1 on chromosome 10 Contains a
              novel gene and the 5' end of a novel gene, complete
              sequence
          Length = 201397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 435    ttctgtggatgcacttgttctggg 458
              |||| |||||||||||||||||||
Sbjct: 167210 ttctatggatgcacttgttctggg 167233
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>gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, complete sequence
          Length = 187070

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   aaaagtctccctttctgtct 586
             ||||||||||||||||||||
Sbjct: 37916 aaaagtctccctttctgtct 37897
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>gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 172752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 134   ctgaaatgattaccgacgctacaggatggtag 165
             |||||||||| || |||||| |||||||||||
Sbjct: 96475 ctgaaatgatgacagacgctgcaggatggtag 96506
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>emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chromosome 11 Contains part
              of the Slit 3 gene for slit homolog 3 (Drosophila),
              complete sequence
          Length = 169097

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 563    tttcaaaagtctccctttct 582
              ||||||||||||||||||||
Sbjct: 130750 tttcaaaagtctccctttct 130731
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
              complete sequence
          Length = 145070

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 598    ataagattctgagcatcctc 617
              ||||||||||||||||||||
Sbjct: 142605 ataagattctgagcatcctc 142624
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>gb|AC164165.2| Mus musculus BAC clone RP23-145F16 from chromosome 16, complete
             sequence
          Length = 214546

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ccttttcctctcctagcctt 272
             ||||||||||||||||||||
Sbjct: 16653 ccttttcctctcctagcctt 16672
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>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   aaaatgaaaggaagatggct 210
             ||||||||||||||||||||
Sbjct: 91992 aaaatgaaaggaagatggct 92011
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>gb|DQ416321.1| Uncultured bacterium clone s2uc26 16S ribosomal RNA gene, partial
           sequence
          Length = 605

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 469 gttttctgggatttgcttgc 488
           ||||||||||||||||||||
Sbjct: 441 gttttctgggatttgcttgc 422
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>dbj|AK124176.1| Homo sapiens cDNA FLJ42182 fis, clone THYMU2031847
          Length = 2475

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  tctgggagcagtgctggttt 436
            ||||||||||||||||||||
Sbjct: 1244 tctgggagcagtgctggttt 1263
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
              complete sequence
          Length = 145356

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 360    ggtctctgtggcaacacttgttct 383
              |||||||||| |||||||||||||
Sbjct: 140776 ggtctctgtgacaacacttgttct 140799
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>gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11, complete sequence
          Length = 163908

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 360   ggtctctgtggcaacacttgttct 383
             |||||||||| |||||||||||||
Sbjct: 54724 ggtctctgtgacaacacttgttct 54747
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 598     ataagattctgagcatcctc 617
               ||||||||||||||||||||
Sbjct: 4774600 ataagattctgagcatcctc 4774619
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>gb|AC026770.6|AC026770 Homo sapiens chromosome 15 clone CTD-2308G16 map 15q21, complete
             sequence
          Length = 94718

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   tcatttcaaaagtctccctt 579
             ||||||||||||||||||||
Sbjct: 17626 tcatttcaaaagtctccctt 17645
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>gb|AF351227.1| Uncultured beta proteobacterium clone 4-4 16S ribosomal RNA gene,
            partial sequence
          Length = 1410

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  gttttctgggatttgcttgc 488
            ||||||||||||||||||||
Sbjct: 1216 gttttctgggatttgcttgc 1197
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>gb|AF351226.1| Uncultured gamma proteobacterium clone 4-3 16S ribosomal RNA gene,
            partial sequence
          Length = 1387

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  gttttctgggatttgcttgc 488
            ||||||||||||||||||||
Sbjct: 1202 gttttctgggatttgcttgc 1183
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>emb|BX294900.1|CNS09SB9 Uncultured planctomycete partial 16S rRNA gene clone CY0ARA055E04 of
            environmental sample of uncultured planctomycete obtained
            from anaerobic digester from France, Evry municipal
            wastewater treatment plant
          Length = 1278

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 469  gttttctgggatttgcttgc 488
            ||||||||||||||||||||
Sbjct: 1180 gttttctgggatttgcttgc 1161
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>gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, complete sequence
          Length = 204601

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaccctcaaattctcaaaac 68
             ||||||||||||||||||||
Sbjct: 33072 aaccctcaaattctcaaaac 33053
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>emb|CR938722.3| Pig DNA sequence from clone CH242-150C11 on chromosome 4, complete
             sequence
          Length = 177720

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   gggagcagtgctggtttctg 439
             ||||||||||||||||||||
Sbjct: 70275 gggagcagtgctggtttctg 70256
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 598   ataagattctgagcatcctc 617
             ||||||||||||||||||||
Sbjct: 47008 ataagattctgagcatcctc 47027
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>dbj|AB045320.1| Homo sapiens genomic DNA, chromosome 10q25-q26, clone:423L12, complete
             sequence
          Length = 91826

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 435   ttctgtggatgcacttgttctggg 458
             |||| |||||||||||||||||||
Sbjct: 25632 ttctatggatgcacttgttctggg 25609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,294,656
Number of Sequences: 3902068
Number of extensions: 5294656
Number of successful extensions: 104888
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104737
Number of HSP's gapped (non-prelim): 151
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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