ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23p04 |
|---|---|
| Clone Library Name | barley_pub |
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 49.3 bits (116), Expect = 1e-05 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 13/123 (10%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXX 479 +E +KV SDA +WL K Q+ L +PV+ VS+I K++ LD FC PI+ Sbjct: 732 TEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSEIVAKSKELDNFCNPIIY---- 787 Query: 478 XXXXXXXPLAETPSPEAYTPEEQ-------------SNGADESAEPASDGAQDEHVGEQM 338 P P+A PE++ +G + ++ D +Q +M Sbjct: 788 -----------KPKPKAEVPEDKPKANSEHNGPMDGQSGTETKSDSTKDSSQHTKSSGEM 836 Query: 337 DTD 329 + D Sbjct: 837 EVD 839
>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 838 Score = 48.1 bits (113), Expect = 2e-05 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXX 479 +E ++V SD+ WL K Q+ L +PV+ VS+I K++ LD FC PI+ Sbjct: 732 AEMERVEKYISDSMNWLNSKMNAQNKLSLTQDPVVKVSEIVTKSKELDNFCNPIVYKPKP 791 Query: 478 XXXXXXXPLAETPSPEAYT------PEEQSNGADESAEPASDGAQDEHVGEQMDTD 329 E P +A T P + +G++ S +P +Q GE M+ D Sbjct: 792 K--------VEAPEDKAKTGSEHNGPMDGQSGSETSPDPPKGSSQHTDSGE-MEVD 838
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 34.7 bits (78), Expect = 0.26 Identities = 24/117 (20%), Positives = 44/117 (37%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXX 479 ++ KV ++A W+ K Q+ +PV+ +I+ K + L C PI+ Sbjct: 729 ADMTKVEKSTNEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSPII----- 783 Query: 478 XXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 308 P P+ P+E+ A+++ G + TD PS + Sbjct: 784 ----------SKPKPKVEPPKEEQKNAEQNGPVDGQGDNPGPQAAEQGTDTAVPSDS 830
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 34.7 bits (78), Expect = 0.26 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -3 Query: 655 EKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 494 E +KV+N D + WL E + +Q+ K PV+ +I + + PI+ Sbjct: 689 EMEKVINAIEDKKKWLDEARHKQETRSKTDAPVVFTEEILQNKNVFENVVNPIL 742
>OXRP_RAT (Q63617) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 34.3 bits (77), Expect = 0.34 Identities = 30/100 (30%), Positives = 42/100 (42%) Frame = -3 Query: 649 QKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXXX 470 +KV+N D TW +Q LP PVLL DI+ K ALDR + ++ Sbjct: 858 EKVIN---DTWTWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYLLNKAKFT-- 912 Query: 469 XXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHV 350 P P P++++ E AS G Q+E V Sbjct: 913 --------KPRPR---PKDKNGTRTEPPLNASAGDQEEKV 941
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 33.1 bits (74), Expect = 0.76 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 1/115 (0%) Frame = -3 Query: 655 EKQKVVNEC-SDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXX 479 E V +C + W K Q+ H +PV+ + I+ + +++ C PI+ Sbjct: 764 EDMAKVEKCVKEKVAWRDSKVNAQNQKAPHQDPVVTAAQIRSEIQSMKFVCDPIINKPKP 823 Query: 478 XXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPS 314 E P TPEE + A P ++G + E+MDT P+ Sbjct: 824 KPK------EEPPKDNGPTPEEAAKDGG-PAPPTTEGGE-----EKMDTSDQAPT 866
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 32.7 bits (73), Expect = 1.00 Identities = 24/108 (22%), Positives = 40/108 (37%) Frame = -3 Query: 655 EKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXX 476 E KV + E W K Q+ + +PV+ I+ + +++ C PI+ Sbjct: 764 EMAKVEKCLKEKEAWRDSKTSAQNQKAAYQDPVVTAQQIRSEIQSMKFICDPIINKPKPK 823 Query: 475 XXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDT 332 E P TP E + D P ++G + G+Q T Sbjct: 824 PK------EEPPKDNGPTPAEAAK--DGGPAPTTEGEEKMDTGDQAPT 863
>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) Length = 999 Score = 32.3 bits (72), Expect = 1.3 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 9/116 (7%) Frame = -3 Query: 649 QKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXX- 473 +KV+NE W +Q LP PVLL DI+ K ALDR + ++ Sbjct: 858 EKVINE---TWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYLLNKAKFTKP 914 Query: 472 ----XXXXXPLAETPSPEAYTPEEQS----NGADESAEPASDGAQDEHVGEQMDTD 329 AE P + + + + G E AEP S+ + E E DT+ Sbjct: 915 RPRPKDKNGTRAEPPLNASASDQGEKVIPPAGQTEDAEPISEPEKVETGSEPGDTE 970
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/111 (20%), Positives = 40/111 (36%) Frame = -3 Query: 646 KVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXXXX 467 KV ++A W+ K Q+ +PV+ +I+ K + L C PI+ Sbjct: 734 KVEKSTNEAMEWMNSKLNLQNKQSLTVDPVVKTKEIEAKIKELTSICSPII--------- 784 Query: 466 XXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPS 314 P P+ P+E+ A+++ G + D PS Sbjct: 785 ------SKPKPKVEPPKEEPKHAEQNGPVDGQGDNPGSQAAEHGADTAVPS 829
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/55 (25%), Positives = 26/55 (47%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 494 SE +KV ++ W+ Q H +PV+ +I K + L+ C+P++ Sbjct: 747 SEMKKVEKSVNEVMEWMNNVMNAQAKRSLHQDPVVRTHEISAKVKELNNVCEPVV 801
>OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (Orp150)| (Hypoxia up-regulated 1) (170 kDa glucose-regulated protein) Length = 999 Score = 31.6 bits (70), Expect = 2.2 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -3 Query: 649 QKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDR 512 +KV+N D W +Q LP PVLL DI+ K ALDR Sbjct: 858 EKVIN---DTWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDR 900
>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 907 Score = 31.6 bits (70), Expect = 2.2 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -3 Query: 445 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 308 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)| (Fibrinogen receptor B) Length = 905 Score = 31.6 bits (70), Expect = 2.2 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = -3 Query: 445 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 308 +P P+ + + +G+D ++ SD D G D+D D S++ Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624
>PTMS_HUMAN (P20962) Parathymosin| Length = 101 Score = 31.2 bits (69), Expect = 2.9 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -3 Query: 418 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 320 EE+ NGA+E E ++ ++E GE+ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70
>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta| member 1) (94 kDa glucose-regulated protein) (GRP94) (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor rejection antigen gp96) Length = 802 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 436 PEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 311 PEA EE ++++E A D QDE GE+MD ++ + Sbjct: 751 PEAQVEEEPEEEPEDTSEDAEDSEQDE--GEEMDAGTEEEEE 790
>PTMS_MOUSE (Q9D0J8) Parathymosin| Length = 100 Score = 30.8 bits (68), Expect = 3.8 Identities = 10/36 (27%), Positives = 23/36 (63%) Frame = -3 Query: 418 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 311 EE+ NGA+E E ++ +D+ G++ D ++++ + Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73
>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)| Length = 101 Score = 30.4 bits (67), Expect = 4.9 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -3 Query: 418 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 320 EE+ NGA+E E ++ +D+ G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70
>TOLA_ECOLI (P19934) Protein tolA| Length = 421 Score = 30.4 bits (67), Expect = 4.9 Identities = 27/109 (24%), Positives = 38/109 (34%) Frame = -3 Query: 652 KQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXXXX 473 KQK E + + K + DA +D KKKAEA K Sbjct: 130 KQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEA--EAAKAAAEAQKKAE 187 Query: 472 XXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDK 326 + + EA E + A E+AE A A+ + E+ DK Sbjct: 188 AAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADK 236
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%) Frame = -3 Query: 439 SPEAYTPEEQ-------SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 296 SPE P++ +NG+D+ A+P++ AQ++ +D+D++ PS + + S Sbjct: 548 SPEKVGPKQAEDAAKSIANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602
>S6A15_BOVIN (Q9XS59) Orphan sodium- and chloride-dependent neurotransmitter| transporter NTT73 (Orphan transporter v7-3) (Solute carrier family 6 member 15) Length = 729 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/70 (32%), Positives = 34/70 (48%) Frame = +2 Query: 332 GVHLLTHMLILSTVASWFSRLICSI*LFFWCISLG*WGFC*RRGLWFWRWPWFGHDGFAE 511 G +LL ++++L L+ I LFF +S+G G+W + P G GFA Sbjct: 97 GAYLLPYLILL---------LVIGIPLFFLELSVGQRIRRGSIGVWNYISPQLGGIGFAS 147 Query: 512 PVKCFSLLLY 541 V CF + LY Sbjct: 148 CVVCFFVALY 157
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/55 (25%), Positives = 26/55 (47%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 494 SE +KV ++ W+ Q +PV+ +IK K + L+ C+P++ Sbjct: 746 SEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCEPVV 800
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/112 (20%), Positives = 41/112 (36%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIMXXXXX 479 SE +KV ++ W+ Q +PV+ +I+ K + L+ C+P++ Sbjct: 747 SEMKKVEKSVNEVMEWMNNVMNAQAKRSLDQDPVVRTHEIRAKVKELNNVCEPVV--NQP 804 Query: 478 XXXXXXXPLAETPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKD 323 L TP+ +E G D A + H E+ + D Sbjct: 805 KPKIESPKLERTPNGPNLDKKEDLEGKDNFGAEAPHQNGECHPNEKGSVNMD 856
>PTMS_BOVIN (P08814) Parathymosin| Length = 101 Score = 29.6 bits (65), Expect = 8.4 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -3 Query: 418 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 320 EE+ NGA+E E ++ ++E G++ D ++++ Sbjct: 38 EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 29.6 bits (65), Expect = 8.4 Identities = 14/55 (25%), Positives = 26/55 (47%) Frame = -3 Query: 658 SEKQKVVNECSDAETWLMEKKQQQDALPKHANPVLLVSDIKKKAEALDRFCKPIM 494 SE +KV ++ W+ Q +PV+ +IK K + L+ C+P++ Sbjct: 746 SEMKKVEKSVNEVMEWMNNVMNAQAKESLDQDPVVRAQEIKTKIKELNNTCEPVV 800
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = -3 Query: 409 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 296 +NG+D+ A+P++ AQ++ +D+D++D S +VS Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,054,397 Number of Sequences: 219361 Number of extensions: 1852150 Number of successful extensions: 5790 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5351 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5771 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
