>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score =  664 bits (335), Expect = 0.0
 Identities = 399/421 (94%), Gaps = 3/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aataaaatgcaaaatc-taaatgagcacgtgagctagcagctcttattcgggacattatt 59
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 aataaaatg-aaaatcataaatgagcacgtgagctagcagctcttattcgggacattatt 881

                                                                       
Query: 60  cgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgctacttg 119
           |||       ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 cgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgctacttg 821

                                                                       
Query: 120 gtgnactcaagagcgtaaatgttgatgaatatgtangttttcttgatgccaccggtaaat 179
           ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 820 gtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaat 761

                                                                       
Query: 180 ccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgctcccttgaag 239
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 760 ccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaag 701

                                                                       
Query: 240 agcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgantctggg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 700 agcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtctggg 641

                                                                       
Query: 300 ttctccgggangataccatncacgacgatcaccttcccgtcttttgggagagcgttgtgg 359
           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgttgtgg 581

                                                                       
Query: 360 cagttgcttaatattttgacgaactcgtcgccgttaagcataanatgtgatccactgcaa 419
           |||||||||| ||||||||||||||||||| ||||||||||||   ||||||||||||||
Sbjct: 580 cagttgcttagtattttgacgaactcgtcgtcgttaagcataag-cgtgatccactgcaa 522

            
Query: 420 g 420
           |
Sbjct: 521 g 521

>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  660 bits (333), Expect = 0.0
 Identities = 397/419 (94%), Gaps = 3/419 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aataaaatgcaaaatc-taaatgagcacgtgagctagcagctcttattcgggacattatt 59
            ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4842 aataaaatg-aaaatcataaatgagcacgtgagctagcagctcttattcgggacattatt 4784

                                                                        
Query: 60   cgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgctacttg 119
            |||       ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4783 cgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgctacttg 4724

                                                                        
Query: 120  gtgnactcaagagcgtaaatgttgatgaatatgtangttttcttgatgccaccggtaaat 179
            ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 4723 gtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaat 4664

                                                                        
Query: 180  ccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgctcccttgaag 239
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4663 ccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaag 4604

                                                                        
Query: 240  agcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgantctggg 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4603 agcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtctggg 4544

                                                                        
Query: 300  ttctccgggangataccatncacgacgatcaccttcccgtcttttgggagagcgttgtgg 359
            |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4543 ttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgttgtgg 4484

                                                                       
Query: 360  cagttgcttaatattttgacgaactcgtcgccgttaagcataanatgtgatccactgca 418
            |||||||||| ||||||||||||||||||| ||||||||||||   |||||||||||||
Sbjct: 4483 cagttgcttagtattttgacgaactcgtcgtcgttaagcataag-cgtgatccactgca 4426

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                           
Query: 170     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgc 229
               ||||||||| |||||||  ||||| ||| | |||||||| | ||||||||| || ||| |
Sbjct: 5374675 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374616

                                                               
Query: 230     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 277
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374615 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374568

>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                         
Query: 170   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgc 229
             ||||||||| |||||||  ||||| ||| | |||||||| | ||||||||| || ||| |
Sbjct: 46742 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 46683

                                                             
Query: 230   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 277
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46682 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 46635

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                           
Query: 170     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgc 229
               ||||||||| |||||||  ||||| ||| | |||||||| | ||||||||| || ||| |
Sbjct: 5374664 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374605

                                                               
Query: 230     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 277
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374557

>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                         
Query: 170   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctntgctttgc 229
             ||||||||| |||||||  ||||| ||| | |||||||| | ||||||||| || ||| |
Sbjct: 91133 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 91192

                                                             
Query: 230   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 277
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91193 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 91240

>gb|AC122313.4| Mus musculus BAC clone RP23-300N8 from chromosome 13, complete sequence
          Length = 224940

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aataaaatgcaaaatctaaa 20
              ||||||||||||||||||||
Sbjct: 114155 aataaaatgcaaaatctaaa 114136

>ref|XM_635236.1| Dictyostelium discoideum hypothetical protein (DDB0205154), partial
            mRNA
          Length = 6717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  taaatgttgatgaatatgta 154
            ||||||||||||||||||||
Sbjct: 4969 taaatgttgatgaatatgta 4950

>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    ttgaagagcacaaacatgat 253
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672

>gb|AC122194.4| Mus musculus BAC clone RP23-47D6 from chromosome 13, complete sequence
          Length = 192347

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aataaaatgcaaaatctaaa 20
              ||||||||||||||||||||
Sbjct: 106832 aataaaatgcaaaatctaaa 106813

>gb|AC122231.2| Mus musculus BAC clone RP23-135M3 from 5, complete sequence
          Length = 172949

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aataaaatgcaaaatctaaa 20
              ||||||||||||||||||||
Sbjct: 132770 aataaaatgcaaaatctaaa 132751

>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    tggcaaactccttctccgtc 218
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372

>emb|AL627256.5| Zebrafish DNA sequence from clone RP71-1L10 in linkage group 8 Contains
             part of a gene for a novel peptide transporter, complete
             sequence
          Length = 169757

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaatgcaaaatctaaatgag 24
             ||||||||||||||||||||
Sbjct: 60157 aaatgcaaaatctaaatgag 60176

>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    aaacatgatgatatccaagg 264
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624

>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    acaaacatgatgatatccaa 262
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978

>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ttttgggagagcgttgtggc 360
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118

>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ttttgggagagcgttgtggc 360
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118

>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ttttgggagagcgttgtggc 360
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118

>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 ttttgggagagcgttgtggc 360
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118

>gb|AC007489.3|AC007489 Homo sapiens chromosome 16 clone RP11-122K22, complete sequence
          Length = 180401

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   taaatgttgatgaatatgta 154
             ||||||||||||||||||||
Sbjct: 68038 taaatgttgatgaatatgta 68019

>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    cggtaaatccagcttgtttg 191
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491

>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ggctagcctggcaaactcct 210
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811

>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tcccttgaagagcacaaaca 249
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538

>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ttgaagagcacaaacatgat 253
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882

>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    cggtaaatccagcttgtttg 191
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,571,840
Number of Sequences: 3902068
Number of extensions: 2571840
Number of successful extensions: 44175
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44112
Number of HSP's gapped (non-prelim): 60
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)