ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
2dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
3dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
4dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 94 6e-16
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
7dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
8dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
9emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chr... 42 1.9
10gb|AF386797.1| Entamoeba histolytica signal recognition particle... 42 1.9
11gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 7.4
12ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 7.4
13gb|AC122312.3| Mus musculus BAC clone RP23-298K16 from 19, compl... 40 7.4
14emb|AL133326.10| Human DNA sequence from clone RP3-398D13 on chr... 40 7.4
15gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.4
16gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 7.4
17gb|AF418272.1|AF418272 Homo sapiens coagulation factor XIII, A1 ... 40 7.4
18emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3 40 7.4
19ref|XM_396214.2| PREDICTED: Apis mellifera similar to Rap1-inter... 40 7.4
20emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 i... 40 7.4
21dbj|AB088221.1| Papaya leaf-distortion mosaic potyvirus genomic ... 40 7.4
22emb|AL844144.10| Mouse DNA sequence from clone RP23-204D17 on ch... 40 7.4
23gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 7.4
24gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromoso... 40 7.4
25emb|AL583890.13| Mouse DNA sequence from clone RP23-212F17 on ch... 40 7.4 
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score =  147 bits (74), Expect = 4e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                          
Query: 301    ttgctcatgaatattgcaaccggctcaccaggggaaggcggattcttgtctagcagagaa 360
              ||||||||||| ||||| || ||||||||||| ||||||||  ||||||| |||| ||||
Sbjct: 115528 ttgctcatgaagattgctactggctcaccaggagaaggcggggtcttgtccagcatagaa 115469

                                                                          
Query: 361    gcatgctttccagctttggcacgagcagctccatcaagtgccgacaggacctcaacatgc 420
              ||||||   |||||||| |||||||||||  |||||   || |||||||||||  |||| 
Sbjct: 115468 gcatgcacgccagctttagcacgagcagcctcatcagaagcagacaggacctctgcatgt 115409

                                                                          
Query: 421    tcaagacccaactgccttctgatcagctctaggttctcctcaagcacattaatttcacca 480
              ||||| || | ||||||  |||||||||| | ||||||||| || ||| | |||||||||
Sbjct: 115408 tcaaggcctacctgcctcttgatcagctccaagttctcctcgagaacactcatttcacca 115349

                                                                   
Query: 481    aaaggaagcttcaaatttanagcctggggaccaacgttccttgcttcatcttt 533
              ||||||||||||||||| | ||| ||||| |||||  |||| || ||||||||
Sbjct: 115348 aaaggaagcttcaaattcaaagcgtggggcccaacactcctcgcctcatcttt 115296
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>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full
            insert sequence
          Length = 3673

 Score =  147 bits (74), Expect = 4e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                        
Query: 301  ttgctcatgaatattgcaaccggctcaccaggggaaggcggattcttgtctagcagagaa 360
            ||||||||||| ||||| || ||||||||||| ||||||||  ||||||| |||| ||||
Sbjct: 3402 ttgctcatgaagattgctactggctcaccaggagaaggcggggtcttgtccagcatagaa 3343

                                                                        
Query: 361  gcatgctttccagctttggcacgagcagctccatcaagtgccgacaggacctcaacatgc 420
            ||||||   |||||||| |||||||||||  |||||   || |||||||||||  |||| 
Sbjct: 3342 gcatgcacgccagctttagcacgagcagcctcatcagaagcagacaggacctctgcatgt 3283

                                                                        
Query: 421  tcaagacccaactgccttctgatcagctctaggttctcctcaagcacattaatttcacca 480
            ||||| || | ||||||  |||||||||| | ||||||||| || ||| | |||||||||
Sbjct: 3282 tcaaggcctacctgcctcttgatcagctccaagttctcctcgagaacactcatttcacca 3223

                                                                 
Query: 481  aaaggaagcttcaaatttanagcctggggaccaacgttccttgcttcatcttt 533
            ||||||||||||||||| | ||| ||||| |||||  |||| || ||||||||
Sbjct: 3222 aaaggaagcttcaaattcaaagcgtggggcccaacactcctcgcctcatcttt 3170
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>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full
            insert sequence
          Length = 3669

 Score =  147 bits (74), Expect = 4e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                        
Query: 301  ttgctcatgaatattgcaaccggctcaccaggggaaggcggattcttgtctagcagagaa 360
            ||||||||||| ||||| || ||||||||||| ||||||||  ||||||| |||| ||||
Sbjct: 3402 ttgctcatgaagattgctactggctcaccaggagaaggcggggtcttgtccagcatagaa 3343

                                                                        
Query: 361  gcatgctttccagctttggcacgagcagctccatcaagtgccgacaggacctcaacatgc 420
            ||||||   |||||||| |||||||||||  |||||   || |||||||||||  |||| 
Sbjct: 3342 gcatgcacgccagctttagcacgagcagcctcatcagaagcagacaggacctctgcatgt 3283

                                                                        
Query: 421  tcaagacccaactgccttctgatcagctctaggttctcctcaagcacattaatttcacca 480
            ||||| || | ||||||  |||||||||| | ||||||||| || ||| | |||||||||
Sbjct: 3282 tcaaggcctacctgcctcttgatcagctccaagttctcctcgagaacactcatttcacca 3223

                                                                 
Query: 481  aaaggaagcttcaaatttanagcctggggaccaacgttccttgcttcatcttt 533
            ||||||||||||||||| | ||| ||||| |||||  |||| || ||||||||
Sbjct: 3222 aaaggaagcttcaaattcaaagcgtggggcccaacactcctcgcctcatcttt 3170
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>dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B04, full
            insert sequence
          Length = 1434

 Score =  147 bits (74), Expect = 4e-32
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                        
Query: 301  ttgctcatgaatattgcaaccggctcaccaggggaaggcggattcttgtctagcagagaa 360
            ||||||||||| ||||| || ||||||||||| ||||||||  ||||||| |||| ||||
Sbjct: 1182 ttgctcatgaagattgctactggctcaccaggagaaggcggggtcttgtccagcatagaa 1123

                                                                        
Query: 361  gcatgctttccagctttggcacgagcagctccatcaagtgccgacaggacctcaacatgc 420
            ||||||   |||||||| |||||||||||  |||||   || |||||||||||  |||| 
Sbjct: 1122 gcatgcacgccagctttagcacgagcagcctcatcagaagcagacaggacctctgcatgt 1063

                                                                        
Query: 421  tcaagacccaactgccttctgatcagctctaggttctcctcaagcacattaatttcacca 480
            ||||| || | ||||||  |||||||||| | ||||||||| || ||| | |||||||||
Sbjct: 1062 tcaaggcctacctgcctcttgatcagctccaagttctcctcgagaacactcatttcacca 1003

                                                                 
Query: 481  aaaggaagcttcaaatttanagcctggggaccaacgttccttgcttcatcttt 533
            ||||||||||||||||| | ||| ||||| |||||  |||| || ||||||||
Sbjct: 1002 aaaggaagcttcaaattcaaagcgtggggcccaacactcctcgcctcatcttt 950
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>ref|XM_450769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3772

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 187/234 (79%)
 Strand = Plus / Minus

                                                                        
Query: 282  ctggacttcaaactcctgcttgctcatgaatattgcaaccggctcaccaggggaaggcgg 341
            |||| ||||||||||||||||||| ||||| ||||| || || |||||||| ||||||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcaccaggagaaggcgg 3353

                                                                        
Query: 342  attcttgtctagcagagaagcatgctttccagctttggcacgagcagctccatcaagtgc 401
              ||||||| | ||  ||| ||||    ||||| || |||||||  ||| |||||   ||
Sbjct: 3352 ggtcttgtccaacattgaaacatgagcaccagccttagcacgagttgcttcatcagaagc 3293

                                                                        
Query: 402  cgacaggacctcaacatgctcaagacccaactgccttctgatcagctctaggttctcctc 461
             |||| |||||| ||||| ||||| || | ||||||  |||||| ||| |  ||||||||
Sbjct: 3292 tgacaagacctctacatggtcaaggcctacctgcctcttgatcaactccaaattctcctc 3233

                                                                  
Query: 462  aagcacattaatttcaccaaaaggaagcttcaaatttanagcctggggaccaac 515
             || ||||| ||||||||||| |||||||||| ||||| ||| ||||| |||||
Sbjct: 3232 gagaacattcatttcaccaaatggaagcttcagatttaaagcatggggcccaac 3179
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 187/234 (79%)
 Strand = Plus / Plus

                                                                            
Query: 282      ctggacttcaaactcctgcttgctcatgaatattgcaaccggctcaccaggggaaggcgg 341
                |||| ||||||||||||||||||| ||||| ||||| || || |||||||| ||||||||
Sbjct: 12677388 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcaccaggagaaggcgg 12677447

                                                                            
Query: 342      attcttgtctagcagagaagcatgctttccagctttggcacgagcagctccatcaagtgc 401
                  ||||||| | ||  ||| ||||    ||||| || |||||||  ||| |||||   ||
Sbjct: 12677448 ggtcttgtccaacattgaaacatgagcaccagccttagcacgagttgcttcatcagaagc 12677507

                                                                            
Query: 402      cgacaggacctcaacatgctcaagacccaactgccttctgatcagctctaggttctcctc 461
                 |||| |||||| ||||| ||||| || | ||||||  |||||| ||| |  ||||||||
Sbjct: 12677508 tgacaagacctctacatggtcaaggcctacctgcctcttgatcaactccaaattctcctc 12677567

                                                                      
Query: 462      aagcacattaatttcaccaaaaggaagcttcaaatttanagcctggggaccaac 515
                 || ||||| ||||||||||| |||||||||| ||||| ||| ||||| |||||
Sbjct: 12677568 gagaacattcatttcaccaaatggaagcttcagatttaaagcatggggcccaac 12677621



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 440      tgatcagctctaggttctcctcaagcacattaatttcaccaaaaggaagcttcaaattta 499
                |||||||||| | || |||||| || ||| | |||||||||||||||||||||||||| |
Sbjct: 19184459 tgatcagctccaagtcctcctcgagaacactcatttcaccaaaaggaagcttcaaattca 19184400

                          
Query: 500      nagcctgggg 509
                 ||| |||||
Sbjct: 19184399 aagcgtgggg 19184390



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 344      tcttgtctagcagagaagcatgctttccagctttggcacgagcagctccatca 396
                ||||||| |||| ||| ||||||   |||||||| |||||||||||| |||||
Sbjct: 19184554 tcttgtccagcatagaggcatgcacgccagctttagcacgagcagcttcatca 19184502
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 187/234 (79%)
 Strand = Plus / Plus

                                                                          
Query: 282    ctggacttcaaactcctgcttgctcatgaatattgcaaccggctcaccaggggaaggcgg 341
              |||| ||||||||||||||||||| ||||| ||||| || || |||||||| ||||||||
Sbjct: 143326 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcaccaggagaaggcgg 143385

                                                                          
Query: 342    attcttgtctagcagagaagcatgctttccagctttggcacgagcagctccatcaagtgc 401
                ||||||| | ||  ||| ||||    ||||| || |||||||  ||| |||||   ||
Sbjct: 143386 ggtcttgtccaacattgaaacatgagcaccagccttagcacgagttgcttcatcagaagc 143445

                                                                          
Query: 402    cgacaggacctcaacatgctcaagacccaactgccttctgatcagctctaggttctcctc 461
               |||| |||||| ||||| ||||| || | ||||||  |||||| ||| |  ||||||||
Sbjct: 143446 tgacaagacctctacatggtcaaggcctacctgcctcttgatcaactccaaattctcctc 143505

                                                                    
Query: 462    aagcacattaatttcaccaaaaggaagcttcaaatttanagcctggggaccaac 515
               || ||||| ||||||||||| |||||||||| ||||| ||| ||||| |||||
Sbjct: 143506 gagaacattcatttcaccaaatggaagcttcagatttaaagcatggggcccaac 143559
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>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full
            insert sequence
          Length = 3772

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 187/234 (79%)
 Strand = Plus / Minus

                                                                        
Query: 282  ctggacttcaaactcctgcttgctcatgaatattgcaaccggctcaccaggggaaggcgg 341
            |||| ||||||||||||||||||| ||||| ||||| || || |||||||| ||||||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactggttcaccaggagaaggcgg 3353

                                                                        
Query: 342  attcttgtctagcagagaagcatgctttccagctttggcacgagcagctccatcaagtgc 401
              ||||||| | ||  ||| ||||    ||||| || |||||||  ||| |||||   ||
Sbjct: 3352 ggtcttgtccaacattgaaacatgagcaccagccttagcacgagttgcttcatcagaagc 3293

                                                                        
Query: 402  cgacaggacctcaacatgctcaagacccaactgccttctgatcagctctaggttctcctc 461
             |||| |||||| ||||| ||||| || | ||||||  |||||| ||| |  ||||||||
Sbjct: 3292 tgacaagacctctacatggtcaaggcctacctgcctcttgatcaactccaaattctcctc 3233

                                                                  
Query: 462  aagcacattaatttcaccaaaaggaagcttcaaatttanagcctggggaccaac 515
             || ||||| ||||||||||| |||||||||| ||||| ||| ||||| |||||
Sbjct: 3232 gagaacattcatttcaccaaatggaagcttcagatttaaagcatggggcccaac 3179
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>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the
             3' end of the MINPP gene for multiple inositol
             polyphosphate histidine phosphatase 1, three novel genes,
             a ribosomal protein S26 (RPS26) pseudogene, the 5' end of
             the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate
             synthase 2 and a CpG island, complete sequence
          Length = 111645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   ttaatctgaagcttaaatctg 284
             |||||||||||||||||||||
Sbjct: 43696 ttaatctgaagcttaaatctg 43716
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>gb|AF386797.1| Entamoeba histolytica signal recognition particle 54 kDa subunit
            SRP54, proteasome alpha subunit, serine-threonine protein
            kinase YAK1, and serine-threonine protein kinase PK2
            genes, complete cds
          Length = 7049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   aagtaaacaaactagacattg 42
            |||||||||||||||||||||
Sbjct: 5893 aagtaaacaaactagacattg 5873
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>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    acattaatttcaccaaaagg 485
              ||||||||||||||||||||
Sbjct: 160847 acattaatttcaccaaaagg 160828
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>ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200009H11
           (LOC419818), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 caaagttctgtgagaagatt 265
           ||||||||||||||||||||
Sbjct: 512 caaagttctgtgagaagatt 531
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>gb|AC122312.3| Mus musculus BAC clone RP23-298K16 from 19, complete sequence
          Length = 206657

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   catgttcccaacaggcgcgt 182
             ||||||||||||||||||||
Sbjct: 61574 catgttcccaacaggcgcgt 61555
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>emb|AL133326.10| Human DNA sequence from clone RP3-398D13 on chromosome 6p24.3-25.3
             Contains the 5' end of the F13A1 gene for coagulation
             factor XIII A chain precursor, a SNAP19 (sRNA activating
             protein complex 19kDa subunit) pseudogene and two putative
             novel gene, complete sequence
          Length = 147038

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ttctttccatgttcccaaca 175
             ||||||||||||||||||||
Sbjct: 43804 ttctttccatgttcccaaca 43785
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      gtatataaagcaagaatgct 64
               ||||||||||||||||||||
Sbjct: 4283217 gtatataaagcaagaatgct 4283198
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     aagcacattaatttcaccaa 481
               ||||||||||||||||||||
Sbjct: 1596135 aagcacattaatttcaccaa 1596116
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>gb|AF418272.1|AF418272 Homo sapiens coagulation factor XIII, A1 polypeptide (F13A1) gene,
             complete cds
          Length = 178952

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   ttctttccatgttcccaaca 175
             ||||||||||||||||||||
Sbjct: 54994 ttctttccatgttcccaaca 55013
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>emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3
          Length = 887

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 caaagttctgtgagaagatt 265
           ||||||||||||||||||||
Sbjct: 406 caaagttctgtgagaagatt 425
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>ref|XM_396214.2| PREDICTED: Apis mellifera similar to Rap1-interacting factor 1
            (LOC412761), mRNA
          Length = 5973

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   aattggcaaaagcttggaaa 111
            ||||||||||||||||||||
Sbjct: 1721 aattggcaaaagcttggaaa 1740
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>emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 in linkage group 14,
             complete sequence
          Length = 104242

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttggtaagtaaacaaacta 35
             ||||||||||||||||||||
Sbjct: 76750 tttggtaagtaaacaaacta 76731
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>dbj|AB088221.1| Papaya leaf-distortion mosaic potyvirus genomic RNA, complete genome,
            strain:P
          Length = 10153

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   aaaagcttggaaactaagtt 118
            ||||||||||||||||||||
Sbjct: 4844 aaaagcttggaaactaagtt 4825
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>emb|AL844144.10| Mouse DNA sequence from clone RP23-204D17 on chromosome 2, complete
              sequence
          Length = 178965

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 182    tcatgctggaatgaaaaggaggaa 205
              ||||||||||| ||||||||||||
Sbjct: 123412 tcatgctggaaagaaaaggaggaa 123389
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 462     aagcacattaatttcaccaa 481
               ||||||||||||||||||||
Sbjct: 1207568 aagcacattaatttcaccaa 1207587
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>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete
              sequence
          Length = 223748

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    ctggacttcaaactcctgct 301
              ||||||||||||||||||||
Sbjct: 188249 ctggacttcaaactcctgct 188230
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>emb|AL583890.13| Mouse DNA sequence from clone RP23-212F17 on chromosome 3, complete
             sequence
          Length = 122919

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    ttctgtacttgccatctcaaaatt 95
             ||||| ||||||||||||||||||
Sbjct: 39713 ttctgcacttgccatctcaaaatt 39690


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,558,756
Number of Sequences: 3902068
Number of extensions: 5558756
Number of successful extensions: 90916
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90763
Number of HSP's gapped (non-prelim): 153
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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