>RIM15_YEAST (P43565) Serine/threonine-protein kinase RIM15 (EC 2.7.11.1)|
          Length = 1770

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 39   SLIQIIQSSTPPKVNPNTLSEPKMIRNKTLPKTRKRIN 152
            SL+ I +SSTPP  NP   +   ++R K+L + +   N
Sbjct: 1066 SLLDISRSSTPPLANPTNSNANNIMRRKSLTENKSFSN 1103

>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
 Frame = -2

Query: 229 IYYAFPDSLLPHLTV-------GIRDSDIVIPWFILFLVFGRVLLRIIFGSDSVLG 83
           +Y+AF D LL H          G RD+ +++     F+ FG     + F  + V+G
Sbjct: 287 VYWAFGDELLNHSNAFSLLPKNGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIG 342

>TRPA1_MOUSE (Q8BLA8) Transient receptor potential cation channel subfamily A|
           member 1 (Ankyrin-like with transmembrane domains
           protein 1)
          Length = 1125

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 208 NRETHNRFITHISA*PSEWGLASGGGSHDSQCLRHGRH 321
           +RETH  F+ H  A P    + SG       CL +G H
Sbjct: 228 SRETHINFVNHKKASPLHLAVQSGDLDMIKMCLDNGAH 265

>Y082_SYNY3 (Q55803) Hypothetical UPF0004 protein slr0082|
          Length = 443

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 229 IYYAFPDSLLPHLTVGIRDSDIVIPWFIL 143
           I+YA+P  L P +   IRD+  V+P+  L
Sbjct: 230 IHYAYPTGLTPKVIEAIRDTPNVLPYLDL 258

>Y489_RICPR (Q9ZD57) Hypothetical protein RP489|
          Length = 288

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -2

Query: 217 FPDSLL--PHLTVGIRDSDIVIPWFILFLVFGRVLLRIIFGSDSVL 86
           F D+LL  P+L +      I++ WF+ FL+   +++ +++G  ++L
Sbjct: 180 FADNLLYAPNLFIFFGTPVIILFWFVTFLLERSIIVLLVYGLANLL 225

>POLS_RUBV (P08564) Structural polyprotein [Contains: Spike glycoprotein E1;|
           Spike glycoprotein E2] (Fragment)
          Length = 522

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 223 YAFPDSLLPHLTVGIRDSDIVIPWFILFLVFGRVLLR 113
           Y  P +  PH   G RD  +++PW ++F+V  R   R
Sbjct: 59  YPLPRTGEPH---GTRDFVLLVPWVLIFMVCRRACRR 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,778,974
Number of Sequences: 219361
Number of extensions: 892035
Number of successful extensions: 1885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)