>gb|BT019113.1| Zea mays clone Contig720.F mRNA sequence
          Length = 865

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 268 ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 327
           |||||| ||||| || || ||||||||   ||||||||||||||| ||||||||||| ||
Sbjct: 495 ctggccggtggacgatgaggtcatgatgttcagtgtctccgtcacagaagacatggcgct 436

                   
Query: 328 cagcgccg 335
           ||||||||
Sbjct: 435 cagcgccg 428

>gb|BT024035.1| Zea mays clone EL01N0425C12 mRNA sequence
          Length = 2016

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 284  gaagtcatgatagccagtgtctccgtcacggaagacatggcactcagcgccg 335
            |||||||||||   |||||| |||||||| ||||||||||||||||||||||
Sbjct: 1721 gaagtcatgatgttcagtgtttccgtcacagaagacatggcactcagcgccg 1670

>gb|AY103649.1| Zea mays PCO110217 mRNA sequence
          Length = 1532

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 284  gaagtcatgatagccagtgtctccgtcacggaagacatggcactcagcgccg 335
            |||||||||||   |||||| |||||||| ||||||||||||||||||||||
Sbjct: 1171 gaagtcatgatgttcagtgtttccgtcacagaagacatggcactcagcgccg 1120

>ref|XM_467453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2187

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 268  ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 327
            |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 1951 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 1892

                  
Query: 328  cagcgc 333
            ||||||
Sbjct: 1891 cagcgc 1886

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                            
Query: 268      ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 327
                |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 29623188 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 29623247

                      
Query: 328      cagcgc 333
                ||||||
Sbjct: 29623248 cagcgc 29623253

>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1479_B12
          Length = 127089

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 268   ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 327
             |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 80909 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 80968

                   
Query: 328   cagcgc 333
             ||||||
Sbjct: 80969 cagcgc 80974

>dbj|AK070279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A11, full
            insert sequence
          Length = 2186

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 268  ctggccagtggaggaggaagtcatgatagccagtgtctccgtcacggaagacatggcact 327
            |||||||||||| || || |||||||| |||| |||||| ||||| || ||||| || ||
Sbjct: 1950 ctggccagtggaagacgatgtcatgatcgccaatgtctcggtcacagatgacatagcgct 1891

                  
Query: 328  cagcgc 333
            ||||||
Sbjct: 1890 cagcgc 1885

>emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on chromosome 1 Contains STSs
              and GSSs, complete sequence
          Length = 130715

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 262    tgggggctggccagtggaggagg 284
              |||||||||||||||||||||||
Sbjct: 117096 tgggggctggccagtggaggagg 117118

>gb|AC068896.9| Homo sapiens chromosome 10 clone RP11-464O2, complete sequence
          Length = 194905

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    cccaaaaactaggaaaagaata 149
              ||||||||||||||||||||||
Sbjct: 165852 cccaaaaactaggaaaagaata 165831

>gb|AC004634.1| Homo sapiens chromosome 5, BAC clone 189n23 (LBNL H168), complete
             sequence
          Length = 45687

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 123   actctcccaaaaactaggaaaagaataaa 151
             ||||||||||||| |||||||||||||||
Sbjct: 34705 actctcccaaaaa-taggaaaagaataaa 34678

>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 245907

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    aaaaactaggaaaagaataaa 151
              |||||||||||||||||||||
Sbjct: 115224 aaaaactaggaaaagaataaa 115244

>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     acagtttgatccaaattattc 57
              |||||||||||||||||||||
Sbjct: 106727 acagtttgatccaaattattc 106707

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     agtggaggaggaagtcatga 293
               ||||||||||||||||||||
Sbjct: 1104659 agtggaggaggaagtcatga 1104640

>gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, complete sequence
          Length = 243323

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 130    caaaaactaggaaaagaataaaccatgg 157
              ||||||||| ||||||||||||| ||||
Sbjct: 139920 caaaaactatgaaaagaataaactatgg 139947

>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence
          Length = 157296

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    acagtttgatccaaattatt 56
             ||||||||||||||||||||
Sbjct: 85777 acagtttgatccaaattatt 85796

>emb|Z82206.1|HS370M22 Human DNA sequence from clone RP3-370M22 on chromosome 22, complete
             sequence
          Length = 143747

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ggatcacaatatcactgtct 176
             ||||||||||||||||||||
Sbjct: 70897 ggatcacaatatcactgtct 70878

>emb|AL512443.7| Human DNA sequence from clone RP11-108P2 on chromosome 1 Contains part
             of a novel gene and the ZNF265 gene for zinc finger
             protein 265, complete sequence
          Length = 55613

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aaaactaggaaaagaataaa 151
             ||||||||||||||||||||
Sbjct: 36784 aaaactaggaaaagaataaa 36765

>emb|AL354682.22| Human DNA sequence from clone RP11-282L14 on chromosome 9, complete
             sequence
          Length = 108785

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   ccaaaaatgatacgtaataa 121
             ||||||||||||||||||||
Sbjct: 47320 ccaaaaatgatacgtaataa 47339

>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
              complete sequence
          Length = 159620

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     gacagtttgatccaaattat 55
              ||||||||||||||||||||
Sbjct: 113584 gacagtttgatccaaattat 113565

>gb|AC114300.2| Homo sapiens chromosome 5 clone RP11-136H13, complete sequence
          Length = 151166

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    aaactaggaaaagaataaac 152
              ||||||||||||||||||||
Sbjct: 117188 aaactaggaaaagaataaac 117169

>ref|NM_142604.1| Drosophila melanogaster CG4413-RA (CG4413), mRNA
          Length = 1519

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  atcgggaaacgcataataga 228
            ||||||||||||||||||||
Sbjct: 1298 atcgggaaacgcataataga 1317

>gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map mi398, complete
             sequence
          Length = 84544

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cataacccacataagtgctt 250
             ||||||||||||||||||||
Sbjct: 80999 cataacccacataagtgctt 81018

>gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 map mi398, complete
              sequence
          Length = 114418

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    cataacccacataagtgctt 250
              ||||||||||||||||||||
Sbjct: 112526 cataacccacataagtgctt 112507

>gb|AY075490.1| Drosophila melanogaster RE41968 full length cDNA
          Length = 1534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  atcgggaaacgcataataga 228
            ||||||||||||||||||||
Sbjct: 1297 atcgggaaacgcataataga 1316

>ref|XM_681166.1| PREDICTED: Danio rerio similar to IMAGE3451454 protein (LOC558002),
           mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccagtgtctccgtcacggaagaca 320
           ||||||| ||||||||||||||||
Sbjct: 254 ccagtgtttccgtcacggaagaca 231

>gb|AC008143.5|AC008143 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone
            BACR33G16, complete sequence
          Length = 134371

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  atcgggaaacgcataataga 228
            ||||||||||||||||||||
Sbjct: 6063 atcgggaaacgcataataga 6044

>emb|BX819672.1|CNS0AAEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS15ZC11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1540

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  ataaaccatgggatcacaat 166
            ||||||||||||||||||||
Sbjct: 1495 ataaaccatgggatcacaat 1476

>gb|AC007816.7|AC007816 Drosophila melanogaster, chromosome 3R, region 92B-92C, BAC clone
             BACR10H14, complete sequence
          Length = 155102

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   atcgggaaacgcataataga 228
             ||||||||||||||||||||
Sbjct: 99825 atcgggaaacgcataataga 99806

>gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66 of 118 of the complete
              sequence
          Length = 232094

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    atcgggaaacgcataataga 228
              ||||||||||||||||||||
Sbjct: 191790 atcgggaaacgcataataga 191771

>dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-382M14, complete
             sequences
          Length = 190462

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    gacagtttgatccaaattat 55
             ||||||||||||||||||||
Sbjct: 40867 gacagtttgatccaaattat 40848

>emb|AL611949.12| Mouse DNA sequence from clone RP23-454F13 on chromosome 4, complete
             sequence
          Length = 186276

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   gccagtggaggaggaagtca 290
             ||||||||||||||||||||
Sbjct: 28703 gccagtggaggaggaagtca 28684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,149,605
Number of Sequences: 3902068
Number of extensions: 3149605
Number of successful extensions: 56913
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56852
Number of HSP's gapped (non-prelim): 62
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)