| Clone Name | rbags24e01 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 95.1 bits (235), Expect = 1e-19 Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -1 Query: 576 FPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDK 400 F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG + Sbjct: 272 FDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMR 331 Query: 399 ITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXGDAAEAAEPME 235 ITS P + L S+ DAE+KA L + A + E +E Sbjct: 332 ITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLE 387
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 94.7 bits (234), Expect = 2e-19 Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -1 Query: 576 FPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDK 400 F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG + Sbjct: 272 FDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMR 331 Query: 399 ITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXXXXXXGDAAEAAEPME 235 ITS P + L S+ DAE+KA L + A + E +E Sbjct: 332 ITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTVENATSGETLE 387
>CDB4_SCHPO (Q09184) Curved DNA-binding protein (42 kDa protein)| Length = 381 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = -1 Query: 576 FPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDK 400 F PF+ R + + R +GL EC +H+LL PY VL +K G +VA T+ L G+ Sbjct: 275 FGPFPFSTRNISFDSRTNMGLNECTSHKLLFPYEVLLDKDGGIVAEFYSTIALTKKGTII 334 Query: 399 IT-SHPLQQLEPSKSIEDDAEIKAWL 325 ++ S P + S +D EI A L Sbjct: 335 LSDSEPKEDFIKSDKKVEDPEIVALL 360
>ARX1_SCHPO (O60180) Probable metalloprotease arx1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 417 Score = 38.1 bits (87), Expect = 0.018 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = -1 Query: 570 IMPFTARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKI-- 397 + PF +L +R LGL E + +L P PVL +++A + TV+ PN S + Sbjct: 318 VFPFHFGSLSSERNLLGLRELTDRHILVPMPVLISSPSNVIAREELTVITQPNPSSDLLC 377 Query: 396 --TSHPLQQLEPSKSIEDDAE 340 P ++ S+ED + Sbjct: 378 LTVPTPPSYVKSDFSLEDGTD 398
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 37.0 bits (84), Expect = 0.040 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 576 FPIMPFTAR-ALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDK 400 +P +PF R L+ + RL L + + YP+L E++ +V + T+L+ NG + Sbjct: 232 YPYLPFAERWVLKNESERLALNSLIRASCIYGYPILKERENGIVGQAEHTILITENGVEI 291 Query: 399 IT 394 T Sbjct: 292 TT 293
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 30.8 bits (68), Expect = 2.9 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = -1 Query: 576 FPIMPFTARALEEKR-ARLGLVECMN----HELLQPYPVLHEKQGDLVAHIKFTVLLMPN 412 F +PF+ R L+ G ++ +N L PYP L++ G VA + TV L N Sbjct: 288 FGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSEN 347 Query: 411 GSDKIT 394 G + +T Sbjct: 348 GKEILT 353
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = -1 Query: 576 FPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLL 421 F +PF R L+ +++ L + H L+Q YP L++ G A + T+LL Sbjct: 353 FGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTILL 407
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -1 Query: 576 FPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMP 415 F + F R L+ E + + L + ++QPYP L + +G V+ + T+LL P Sbjct: 371 FSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRP 427
>GUNB_NEOPA (Q12647) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 473 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 8/49 (16%) Frame = +2 Query: 368 GSNCCSGCDVILSDPFGINNTVNLMWA--------TRSPCFSWRTGYGC 490 G +CC+GC+V +D G N W T C+S + GY C Sbjct: 398 GYSCCNGCEVEYTDSDGEWGVENGNWCGIKSSCSNTSRICWSEKLGYPC 446
>ARX1_YARLI (Q6CCY2) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 484 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -1 Query: 570 IMPFTARALEEK--RARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFT 430 + PF +E +ARLGL E + H++L P PV K L A +F+ Sbjct: 346 VYPFKLSHVESNVAKARLGLGEILAHQILVPIPVKVAKFVPLAALYEFS 394 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,250,915 Number of Sequences: 219361 Number of extensions: 1453722 Number of successful extensions: 3456 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3456 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)