ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24d22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING fi... 28 6.3

>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)|
           (RING finger protein 16)
          Length = 477

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 177 WEHGFNML*XMHFLLGMCRVSRYTLNNRIPRCP 79
           WE G N+     + LG+CR    +  +R+P+CP
Sbjct: 353 WEVGMNITGDALWALGVCR-DNVSRKDRVPKCP 384


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,420,039
Number of Sequences: 219361
Number of extensions: 634420
Number of successful extensions: 1260
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top