ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags23o11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 23149643 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 23149584 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 23149583 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 23149524 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 23149523 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 23149464 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 23149463 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 23149405 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 23149404 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 23149346 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 23149345 gggaggaggccgctggggagc 23149325 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 7112032 ggcgtcggcgtcctcgaacgcctcc 7112008
>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full insert sequence Length = 960 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 510 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 451 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 450 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 391 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 390 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 331 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 330 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 272 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 271 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 213 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 212 gggaggaggccgctggggagc 192
>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full insert sequence Length = 1046 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 511 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 452 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 451 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 392 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 391 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 332 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 331 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 273 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 272 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 214 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 213 gggaggaggccgctggggagc 193
>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full insert sequence Length = 1001 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 512 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 453 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 452 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 393 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 392 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 333 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 332 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 274 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 273 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 215 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 214 gggaggaggccgctggggagc 194
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 23077834 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 23077775 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 23077774 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 23077715 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 23077714 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 23077655 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 23077654 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 23077596 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 23077595 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 23077537 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 23077536 gggaggaggccgctggggagc 23077516 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 7111911 ggcgtcggcgtcctcgaacgcctcc 7111887
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 280 bits (141), Expect = 6e-72 Identities = 278/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Plus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 28754 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 28813 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 28814 cttgccggtgggggggtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 28873 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 28874 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 28933 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 28934 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 28992 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 28993 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 29051 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 29052 gggaggaggccgctggggagc 29072
>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full insert sequence Length = 1044 Score = 272 bits (137), Expect = 1e-69 Identities = 277/321 (86%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 372 ggcctcgaacgcctccacggggaagctgcgggacaggccgccgagggccttgcagtggag 431 ||||||||| || || ||||||||||||||||| |||||||||| |||||||||| ||| Sbjct: 505 ggcctcgaaggcgtcgacggggaagctgcgggagaggccgccgatggccttgcaggtgag 446 Query: 432 cttgccggtgggcgggtcgtcgacgcagatctcgtggaggttgacccagatgagcatctc 491 |||||||||||| | |||||||||| ||||||||||||| ||||||||||||| | ||| Sbjct: 445 cttgccggtgggggtgtcgtcgacggcgatctcgtggagggtgacccagatgaggagctc 386 Query: 492 cttggccttgacgccggagatcttcttcaggcggcccttctcggcgatggcgcagacctc 551 ||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||| Sbjct: 385 cttggccttgacgccggtgatcttgcggaggcggcccttctcggcgacggcggagacctc 326 Query: 552 ggtggcgtaggaagacgtgccggccggccttggcgaagtagtggtccacccgcttcttct 611 || |||||| | |||||| |||||||||||||||||| ||||||||||| | | || Sbjct: 325 ggcggcgta-gctgacgtggcggccggccttggcgaagaagtggtccaccttccgccgct 267 Query: 612 gcttgagccacacgaagccggtctccttcaacgtacccgcactcgatgatgtccttgagt 671 |||| ||||||||||| ||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 266 gcttcagccacacgaacccggtctcc-tccacgtagccgcactcgatgatgtcgcggaga 208 Query: 672 ggcaggagcccgctggggagc 692 || ||||| |||||||||||| Sbjct: 207 gggaggaggccgctggggagc 187
>ref|NM_192397.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 411 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 420 cttgcagtggagcttgccggtgggcgggtcgtcgacgcagatctcgt 466 |||| |||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 354 cttgaagtggatcttgccggtgggcgggttgtcgacggtgatctcgt 308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 420 cttgcagtggagcttgccggtgggcgggtcgtcgacgcagatctcgt 466 |||| |||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 26391875 cttgaagtggatcttgccggtgggcgggttgtcgacggtgatctcgt 26391829 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 cccttctcggcgatggcgcagacctcgg 553 ||||||||||||||||||| | |||||| Sbjct: 5529485 cccttctcggcgatggcgcggtcctcgg 5529512 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgatctcgtcgacggcggcg 210 |||||||||||||||||||| Sbjct: 2532390 cgatctcgtcgacggcggcg 2532409
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 420 cttgcagtggagcttgccggtgggcgggtcgtcgacgcagatctcgt 466 |||| |||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 65740 cttgaagtggatcttgccggtgggcgggttgtcgacggtgatctcgt 65694
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 420 cttgcagtggagcttgccggtgggcgggtcgtcgacgcagatctcgt 466 |||| |||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 494 cttgaagtggatcttgccggtgggcgggttgtcgacggtgatctcgt 448
>gb|AY106955.1| Zea mays PCO141660 mRNA sequence Length = 630 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 420 cttgcagtggagcttgccggtgggcgggtcgtcg 453 |||| |||||| |||||||||||||||||||||| Sbjct: 429 cttgaagtggatcttgccggtgggcgggtcgtcg 396
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 tgctgcctcctccttgagcttc 273 |||||||||||||||||||||| Sbjct: 29015 tgctgcctcctccttgagcttc 29036
>ref|NM_194194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 308 agcagctccttggtcttcacgccggtgatcttcttcag 271
>ref|NM_194186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 311 agcagctccttggtcttcacgccggcgatcttcttcag 274
>ref|NM_194169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 308 agcagctccttggtcttcacgccggtgatcttcttcag 271
>ref|XM_513260.1| PREDICTED: Pan troglodytes LOC456689 (LOC456689), mRNA Length = 3078 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cagctgccccctcctccttctc 296 |||||||||||||||||||||| Sbjct: 2368 cagctgccccctcctccttctc 2347
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 tgctgcctcctccttgagcttc 273 |||||||||||||||||||||| Sbjct: 186887 tgctgcctcctccttgagcttc 186908
>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 217330 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 tggctgcaaccgcctccgcctgcacc 156 |||||||| ||||||||||||||||| Sbjct: 15271 tggctgcacccgcctccgcctgcacc 15296
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ccgatctcgtcgacggcggcgg 211 |||||||||||||||||||||| Sbjct: 133169 ccgatctcgtcgacggcggcgg 133148
>gb|AF296010.1| Unidentified bacterium SM-A75 RNAase P (rnpB) gene, partial sequence Length = 289 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 cttgaggcgtccggtgacgggc 354 |||||||||||||||||||||| Sbjct: 228 cttgaggcgtccggtgacgggc 249
>ref|XM_810707.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506303.150) partial mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 cgcctccgcctgcaccgttgcc 162 |||||||||||||||||||||| Sbjct: 487 cgcctccgcctgcaccgttgcc 466
>ref|XM_813112.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506811.80) partial mRNA Length = 864 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 cgcctccgcctgcaccgttgcc 162 |||||||||||||||||||||| Sbjct: 487 cgcctccgcctgcaccgttgcc 466
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 ccccttgggcttctctgctgcc 258 |||||||||||||||||||||| Sbjct: 42816 ccccttgggcttctctgctgcc 42837
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 gacggcggcggggccgggggct 222 |||||||||||||||||||||| Sbjct: 9691 gacggcggcggggccgggggct 9670
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 gacggcggcggggccgggggct 222 |||||||||||||||||||||| Sbjct: 11001 gacggcggcggggccgggggct 11022
>emb|AL357500.17| Human DNA sequence from clone RP11-242O24 on chromosome 1 Contains the 3' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), three novel genes, the 3' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 and a CpG island, complete sequence Length = 112392 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cagctgccccctcctccttctc 296 |||||||||||||||||||||| Sbjct: 32162 cagctgccccctcctccttctc 32141
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 ccgatctcgtcgacggcggcgg 211 |||||||||||||||||||||| Sbjct: 244347 ccgatctcgtcgacggcggcgg 244368
>gb|BC094230.1| Mus musculus nuclear receptor interacting protein 2, mRNA (cDNA clone MGC:106498 IMAGE:30535040), complete cds Length = 3308 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 tgctgcctcctccttgagcttc 273 |||||||||||||||||||||| Sbjct: 1210 tgctgcctcctccttgagcttc 1231
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 gacggcggcggggccgggggct 222 |||||||||||||||||||||| Sbjct: 14818 gacggcggcggggccgggggct 14839
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 1094377 agcagctccttggtcttcacgccggtgatcttcttcag 1094414 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 1088785 agcagctccttggtcttcacgccggtgatcttcttcag 1088822 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 1066437 agcagctccttggtcttcacgccggcgatcttcttcag 1066400 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 972249 agcagctccttggtcttcacgccggtgatcttcttcag 972212 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 1084928 ctccttggtcttcacgccggcgatcttcttcag 1084960 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 975623 ctccttggtcttcacgccggtgatcttcttcag 975591 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 8271712 gccgatctcgtcgacggcgacggg 8271689
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 76596 agcagctccttggtcttcacgccggtgatcttcttcag 76559 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 79970 ctccttggtcttcacgccggtgatcttcttcag 79938
>gb|U28110.1|UEU28110 Unidentified eubacterium clone PS#27 ribonuclease P RNA (rnpB) gene, partial sequence Length = 342 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 cttgaggcgtccggtgacgggc 354 |||||||||||||||||||||| Sbjct: 268 cttgaggcgtccggtgacgggc 289
>gb|AC005015.2|AC005015 Homo sapiens BAC clone GS1-166C5 from 7q11.23-q21.1, complete sequence Length = 219935 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 ccccttgggcttctctgctgcc 258 |||||||||||||||||||||| Sbjct: 12835 ccccttgggcttctctgctgcc 12814
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 91965 agcagctccttggtcttcacgccggtgatcttcttcag 92002 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 86373 agcagctccttggtcttcacgccggtgatcttcttcag 86410 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 484 agcatctccttggccttgacgccggagatcttcttcag 521 |||| |||||||| ||| ||||||| |||||||||||| Sbjct: 64025 agcagctccttggtcttcacgccggcgatcttcttcag 63988 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 82516 ctccttggtcttcacgccggcgatcttcttcag 82548
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 gacggcggcggggccgggggct 222 |||||||||||||||||||||| Sbjct: 19547 gacggcggcggggccgggggct 19568
>emb|AL833483.1|HSM804796 Homo sapiens mRNA; cDNA DKFZp686E1929 (from clone DKFZp686E1929) Length = 5229 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cagctgccccctcctccttctc 296 |||||||||||||||||||||| Sbjct: 131 cagctgccccctcctccttctc 110
>gb|AY168440.1| Oryza sativa (indica cultivar-group) IPK (ipk) gene, complete cds Length = 5207 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 2086 ggcgtcggcgtcctcgaacgcctcc 2062
>gb|AF312920.1| Oryza sativa protein kinase-like protein mRNA, complete cds Length = 2138 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 672 ggcgtcggcgtcctcgaacgcctcc 648
>ref|NM_194192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 303 ctccttggtcttcacgccggcgatcttcttcag 271
>ref|NM_194170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 489 ctccttggccttgacgccggagatcttcttcag 521 |||||||| ||| ||||||| |||||||||||| Sbjct: 303 ctccttggtcttcacgccggtgatcttcttcag 271
>ref|XM_955545.1| Neurospora crassa OR74A hypothetical protein (NCU09691.1) partial mRNA Length = 393 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 gcgggtcgtcgacgcagatct 463 ||||||||||||||||||||| Sbjct: 211 gcgggtcgtcgacgcagatct 191
>ref|XM_330340.1| Neurospora crassa OR74A hypothetical protein (NCU09691.1) partial mRNA Length = 393 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 gcgggtcgtcgacgcagatct 463 ||||||||||||||||||||| Sbjct: 211 gcgggtcgtcgacgcagatct 191
>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence Length = 1227 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 cgggcacgggcagggcgtcggcggc 374 ||||||||||||||||| ||||||| Sbjct: 522 cgggcacgggcagggcgccggcggc 498
>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence Length = 209066 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gcttctctgctgcctcctcct 265 ||||||||||||||||||||| Sbjct: 68548 gcttctctgctgcctcctcct 68528
>emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chromosome X Contains the 5' end of the PHKA2 gene for phosphorylase kinase, alpha 2 (liver), the 3' end of the GPR64 gene for G protein-coupled receptor 64 and a CpG island, complete sequence Length = 128189 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 ggcggggccgggggctggagcgacg 231 ||||||| ||||||||||||||||| Sbjct: 73436 ggcggggacgggggctggagcgacg 73460
>gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's Hospital Oakland Research Institute) complete sequence Length = 224778 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cttctctgtcttcttcttgag 338 ||||||||||||||||||||| Sbjct: 178830 cttctctgtcttcttcttgag 178810
>emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosmid contig 64C2 Length = 81866 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 gcgggtcgtcgacgcagatct 463 ||||||||||||||||||||| Sbjct: 19328 gcgggtcgtcgacgcagatct 19308
>dbj|AB088119.1| Streptomyces sp. TP-A0274 staurosporine biosynthetic gene cluster (staR, staB, staA, staN, staG, staO, staD, staP, staMA, staJ, staK, staI, staE, staMB), complete cds Length = 22999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gccgatctcgtcgacggcggc 209 ||||||||||||||||||||| Sbjct: 11282 gccgatctcgtcgacggcggc 11262
>dbj|AB071406.1| Streptomyces sp. TP-A0274 gene for chromopyrrolic acid synthase StaD, complete cds Length = 3420 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 gccgatctcgtcgacggcggc 209 ||||||||||||||||||||| Sbjct: 1397 gccgatctcgtcgacggcggc 1377
>gb|AC069307.7| Homo sapiens BAC clone RP11-738E22 from 4, complete sequence Length = 203474 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 aatgcaatgcgttattctgaa 61 ||||||||||||||||||||| Sbjct: 114989 aatgcaatgcgttattctgaa 114969
>ref|XM_215812.3| PREDICTED: Rattus norvegicus transformation related protein 53 binding protein 1 (predicted) (Trp53bp1_predicted), mRNA Length = 6045 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cttctctgtcttcttcttgag 338 ||||||||||||||||||||| Sbjct: 3220 cttctctgtcttcttcttgag 3200
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 519 caggcggcccttctcggcgatggcg 543 ||||| ||||||||||||||||||| Sbjct: 750662 caggctgcccttctcggcgatggcg 750686
>gb|AE005066.1| Halobacterium sp. NRC-1 section 97 of 170 of the complete genome Length = 11460 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 gatctcgtcgacggcggcggggccg 216 |||||||||||| |||||||||||| Sbjct: 2866 gatctcgtcgaccgcggcggggccg 2842
>dbj|AK072981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E22, full insert sequence Length = 2390 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 728 ggcgtcggcgtcctcgaacgcctcc 704
>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence Length = 746 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 468 gaggttgacccagatgagcatctccttggccttgacgccgg 508 |||| ||||||||||||| | |||||||| |||||| |||| Sbjct: 355 gagggtgacccagatgaggagctccttggtcttgaccccgg 315
>gb|L24492.1|REREUTPBC Rhodococcus erythropolis ORF1, ethanolamine permease (eutP), ethanolamine ammonia-lyase large subunit (eutB), ethanolamine ammonia-lyase small subunit (eutC) genes, complete cds and ORF2 gene, partial cds Length = 5173 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 agatcttcttcaggcggcccttctc 533 ||||||||||||||||||| ||||| Sbjct: 610 agatcttcttcaggcggccgttctc 586
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 ggcgtcggcggcctcgaacgcctcc 387 |||||||||| |||||||||||||| Sbjct: 20332 ggcgtcggcgtcctcgaacgcctcc 20308
>emb|AL845332.11| Mouse DNA sequence from clone RP23-326D18 on chromosome 2, complete sequence Length = 200453 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 cacccgcttcttctgcttgag 618 ||||||||||||||||||||| Sbjct: 68957 cacccgcttcttctgcttgag 68977
>ref|NM_188295.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 cccttctcggcgatggcgcagacctcgg 553 ||||||||||||||||||| | |||||| Sbjct: 530 cccttctcggcgatggcgcggtcctcgg 503
>ref|XM_480517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tcgtcgacggcggcggggccgggg 219 ||||||||||||||| |||||||| Sbjct: 476 tcgtcgacggcggcgaggccgggg 453
>ref|XM_516278.1| PREDICTED: Pan troglodytes plasma membrane calcium ATPase 2 (LOC460168), mRNA Length = 4845 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gcttctctgctgcctcctcc 264 |||||||||||||||||||| Sbjct: 1405 gcttctctgctgcctcctcc 1424
>ref|NM_006310.2| Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), mRNA Length = 4177 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 130 cccctcctccttctcgtctt 149
>gb|BT016587.1| Zea mays clone Contig420 mRNA sequence Length = 999 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 526 cccttctcggcgatggcgcagacctcgg 553 ||||||||||||||||||| | |||||| Sbjct: 589 cccttctcggcgatggcgcggtcctcgg 562
>gb|AY729488.1| Helicosporidium sp. ex Simulium jonesii EF-1 alpha-like protein (efl) mRNA, complete cds Length = 1701 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gcctcctccttgagcttctc 275 |||||||||||||||||||| Sbjct: 182 gcctcctccttgagcttctc 163
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 cctcctccttgagcttctcagctg 280 ||||||||||||||||||| |||| Sbjct: 430570 cctcctccttgagcttctccgctg 430593
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 3710 gccgatctcgtcgacggcgacggg 3733
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tgctctccttctctgtcttc 330 |||||||||||||||||||| Sbjct: 126476 tgctctccttctctgtcttc 126495
>ref|XM_588936.2| PREDICTED: Bos taurus similar to Potassium voltage-gated channel subfamily A member 6 (Voltage-gated potassium channel subunit Kv1.6) (HBK2) (LOC539714), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 1366 tgacgggcacgggcagggcg 1347
>ref|XM_656612.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4100.2), mRNA Length = 630 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cttctcggcgatggcgcaga 547 |||||||||||||||||||| Sbjct: 496 cttctcggcgatggcgcaga 477
>gb|AY049859.1| Urobatis jamaicensis 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 527 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ctccacggggaagctgcggg 403 |||||||||||||||||||| Sbjct: 183 ctccacggggaagctgcggg 164
>emb|AJ698944.1| Equus caballus csf1R gene, smf gene, tigd14 gene, slc26a2 gene, ORF1 and cGMP-alpha gene Length = 142625 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ctccttctctgtcttcttct 334 |||||||||||||||||||| Sbjct: 105634 ctccttctctgtcttcttct 105615
>ref|XM_572818.1| Cryptococcus neoformans var. neoformans JEC21 mitochondrial ribosomal protein (CNI01480) partial mRNA Length = 768 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 cctcctccttgagcttctcagctg 280 ||||||||||||||||||| |||| Sbjct: 751 cctcctccttgagcttctccgctg 728
>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence Length = 235095 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 tctccttctctgtcttcttc 333 |||||||||||||||||||| Sbjct: 224223 tctccttctctgtcttcttc 224204
>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete sequence Length = 169912 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tccttctctgtcttcttctt 335 |||||||||||||||||||| Sbjct: 81207 tccttctctgtcttcttctt 81188
>emb|Z68751.1|CET05E11 Caenorhabditis elegans Cosmid T05E11, complete sequence Length = 24554 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tctgctgcctcctccttgag 269 |||||||||||||||||||| Sbjct: 17897 tctgctgcctcctccttgag 17878
>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence Length = 193210 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ccttctctgtcttcttcttg 336 |||||||||||||||||||| Sbjct: 67846 ccttctctgtcttcttcttg 67827
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ggccttgcagtggagcttgc 436 |||||||||||||||||||| Sbjct: 68497 ggccttgcagtggagcttgc 68478
>gb|AC102934.11| Mus musculus chromosome 3, clone RP24-209C11, complete sequence Length = 172970 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 atggttgatgacatgctaatgcaa 47 ||||||||||||||| |||||||| Sbjct: 35505 atggttgatgacatgttaatgcaa 35482
>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence Length = 174437 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 tctccttctctgtcttcttcttga 337 ||||||||||||| |||||||||| Sbjct: 123678 tctccttctctgttttcttcttga 123655
>emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on chromosome 10 Contains the 5' end of the gene for HHGP protein (HHGP) (FLJ11888), the gene for a novel protein similar to secreted frizzled-related protein 4 SFRP4 (FLJ37702), the gene for a novel protein similar to threonine synthase, containing FLJ2202 and FLJ37043 and two CpG islands, complete sequence Length = 139491 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ggcggcggggccgggggctg 223 |||||||||||||||||||| Sbjct: 12251 ggcggcggggccgggggctg 12232
>ref|XM_501769.1| Yarrowia lipolytica CLIB122, YALI0C12617g predicted mRNA Length = 1152 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctcctccttgagcttctca 276 |||||||||||||||||||| Sbjct: 289 cctcctccttgagcttctca 270
>emb|AL139338.21| Human DNA sequence from clone RP11-149I8 on chromosome 10p12.31-14 Contains the 5' end of the gene for a novel protein (LOC221061) and a CpG island, complete sequence Length = 112261 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cggcggcggggccgggggct 222 |||||||||||||||||||| Sbjct: 24222 cggcggcggggccgggggct 24203
>gb|AC087442.13| Homo sapiens chromosome 11, clone RP11-495O11, complete sequence Length = 200269 Score = 40.1 bits (20), Expect = 9.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 476 cccagatgagcatctccttggccttgac 503 |||||||| ||||||||||||||||||| Sbjct: 24169 cccagatg-gcatctccttggccttgac 24195
>gb|AC133680.2| Homo sapiens 3 BAC RP11-102C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130370 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcggcggggccgggggctgg 224 |||||||||||||||||||| Sbjct: 91432 gcggcggggccgggggctgg 91451
>gb|BT009376.1| Triticum aestivum clone wlm96.pk030.e11:fis, full insert mRNA sequence Length = 1588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gatctcgtcgacggcggcgg 211 |||||||||||||||||||| Sbjct: 876 gatctcgtcgacggcggcgg 857
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 238652 gccgatctcgtcgacggcgacggg 238675
>gb|BC067792.1| Homo sapiens hypothetical protein FLJ11822, mRNA (cDNA clone IMAGE:5302832), containing frame-shift errors Length = 1588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 86 cccctcctccttctcgtctt 105
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cgggcacgggcagggcgtcg 369 |||||||||||||||||||| Sbjct: 126633 cgggcacgggcagggcgtcg 126614
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tggcgcagacctcggtggcg 558 |||||||||||||||||||| Sbjct: 153382 tggcgcagacctcggtggcg 153363 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tggcgcagacctcggtggcg 558 |||||||||||||||||||| Sbjct: 153367 tggcgcagacctcggtggcg 153348
>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 6/7 Length = 326301 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cctccgcctgcaccgttgcc 162 |||||||||||||||||||| Sbjct: 216901 cctccgcctgcaccgttgcc 216882
>gb|AC106845.8| Homo sapiens chromosome 8, clone RP11-183J19, complete sequence Length = 166676 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tgctctccttctctgtcttc 330 |||||||||||||||||||| Sbjct: 56357 tgctctccttctctgtcttc 56338
>gb|AC103855.3| Homo sapiens chromosome 11, clone RP11-958J22, complete sequence Length = 183720 Score = 40.1 bits (20), Expect = 9.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 476 cccagatgagcatctccttggccttgac 503 |||||||| ||||||||||||||||||| Sbjct: 171058 cccagatg-gcatctccttggccttgac 171084
>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9, complete sequence Length = 179135 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gtgctctccttctctgtctt 329 |||||||||||||||||||| Sbjct: 84163 gtgctctccttctctgtctt 84182
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cagggcgtcggcggcctcga 379 |||||||||||||||||||| Sbjct: 3729475 cagggcgtcggcggcctcga 3729456
>gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of the complete genome Length = 12778 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gcagggcgtcggcggcctcg 378 |||||||||||||||||||| Sbjct: 3232 gcagggcgtcggcggcctcg 3251
>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome Length = 14034 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gcagggcgtcggcggcctcg 378 |||||||||||||||||||| Sbjct: 233 gcagggcgtcggcggcctcg 252
>dbj|AK095877.1| Homo sapiens cDNA FLJ38558 fis, clone HCHON2003327, highly similar to PUROMYCIN-SENSITIVE AMINOPEPTIDASE (EC 3.4.11.-) Length = 2241 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 95 cccctcctccttctcgtctt 114
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 aggcggcccttctcggcgat 539 |||||||||||||||||||| Sbjct: 2403260 aggcggcccttctcggcgat 2403241
>ref|NM_135440.1| Drosophila melanogaster CG4450-RA (CG4450), mRNA Length = 2158 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 1520 tgacgggcacgggcagggcg 1501
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 88315 gccgatctcgtcgacggcgacggg 88338
>gb|AC025682.6| Homo sapiens chromosome 17, clone RP11-580I16, complete sequence Length = 158135 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 125406 cccctcctccttctcgtctt 125387
>dbj|AK137734.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930125L22 product:CDC2-related kinase 7, full insert sequence Length = 3557 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cttctctgctgcctcctcct 265 |||||||||||||||||||| Sbjct: 1686 cttctctgctgcctcctcct 1667
>gb|AC105900.2| Homo sapiens chromosome 3 clone RP11-30P17, complete sequence Length = 148377 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gcggcggggccgggggctgg 224 |||||||||||||||||||| Sbjct: 137364 gcggcggggccgggggctgg 137345
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 ggccggccttggcgaagtag 592 |||||||||||||||||||| Sbjct: 2825965 ggccggccttggcgaagtag 2825984 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgatctcgtcgacggcggcg 210 |||||||||||||||||||| Sbjct: 1595876 cgatctcgtcgacggcggcg 1595895
>gb|AC092492.1|AC092492 Drosophila melanogaster, chromosome 2L, region 30B-30E, BAC clone BACR20B09, complete sequence Length = 177997 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 159612 tgacgggcacgggcagggcg 159631
>ref|NM_069679.2| Caenorhabditis elegans T05E11.3 (T05E11.3) mRNA, complete cds Length = 2589 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tctgctgcctcctccttgag 269 |||||||||||||||||||| Sbjct: 824 tctgctgcctcctccttgag 805
>dbj|AB162285.1| Uncultured bacterium nirS gene for nitrite reductase, partial cds, clone:S-Z29 Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 cacgaagccggtctccttca 641 |||||||||||||||||||| Sbjct: 123 cacgaagccggtctccttca 104
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cctccgcctgcaccgttgcc 162 |||||||||||||||||||| Sbjct: 1763613 cctccgcctgcaccgttgcc 1763594
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 238652 gccgatctcgtcgacggcgacggg 238675
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tcgtcgacggcggcggggccgggg 219 ||||||||||||||| |||||||| Sbjct: 5552985 tcgtcgacggcggcgaggccgggg 5552962
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 2481 tgacgggcacgggcagggcg 2500
>gb|AC021317.19| Homo sapiens chromosome 17, clone RP11-678G7, complete sequence Length = 180876 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 43188 cccctcctccttctcgtctt 43207
>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence Length = 182147 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 ggttgacccagatgagcatc 489 |||||||||||||||||||| Sbjct: 148770 ggttgacccagatgagcatc 148751
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cgatctcgtcgacggcggcg 210 |||||||||||||||||||| Sbjct: 86811 cgatctcgtcgacggcggcg 86830
>gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, complete sequence Length = 128785 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 279 tgccccctcctccttctcgtctttctgg 306 |||||||||||||||||| ||| ||||| Sbjct: 35776 tgccccctcctccttctcttctctctgg 35803
>gb|AC115992.13| Homo sapiens chromosome 17, clone CTD-2022O14, complete sequence Length = 139475 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 29105 cccctcctccttctcgtctt 29086
>gb|AF252387.1|AF252387 Homo sapiens puromycin-sensitive aminopeptidase (NPEPPS) gene, promoter, exon 1 and partial cds Length = 650 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 407 cccctcctccttctcgtctt 426
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 526 cccttctcggcgatggcgcagacctcgg 553 ||||||||||||||||||| | |||||| Sbjct: 126325 cccttctcggcgatggcgcggtcctcgg 126352
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cggcctcgaacgcctccacg 390 |||||||||||||||||||| Sbjct: 3261758 cggcctcgaacgcctccacg 3261777
>gb|AF056943.1|AF056943 Oryctolagus cuniculus potassium channel Kv1.5 mRNA, complete cds Length = 1872 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 1516 tgacgggcacgggcagggcg 1497
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cgtcgacggcggcggggccg 216 |||||||||||||||||||| Sbjct: 1994928 cgtcgacggcggcggggccg 1994947
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 154735 gccgatctcgtcgacggcgacggg 154712
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 66824 gccgatctcgtcgacggcgacggg 66801
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tcgtcgacggcggcggggccgggg 219 ||||||||||||||| |||||||| Sbjct: 8361 tcgtcgacggcggcgaggccgggg 8338
>dbj|AK129237.1| Mus musculus mRNA for mKIAA0904 protein Length = 4608 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cttctctgctgcctcctcct 265 |||||||||||||||||||| Sbjct: 2955 cttctctgctgcctcctcct 2936
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tcgtcgacggcggcggggccgggg 219 ||||||||||||||| |||||||| Sbjct: 79213 tcgtcgacggcggcgaggccgggg 79190
>ref|XM_317267.2| Anopheles gambiae str. PEST ENSANGP00000021912 (ENSANGG00000019423), partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 1063 tgacgggcacgggcagggcg 1044
>emb|AJ323212.1|HSA323212 Homo sapiens genomic sequence surrounding NotI site, clone NB1-078R Length = 472 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ggcggcggggccgggggctg 223 |||||||||||||||||||| Sbjct: 64 ggcggcggggccgggggctg 45
>emb|AJ132583.1|HSA132583 Homo sapiens mRNA for puromycin sensitive aminopeptidase, partial Length = 4071 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 20 cccctcctccttctcgtctt 39
>gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (California Institute of Technology BAC Library) complete sequence Length = 131105 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gcttctctgctgcctcctcc 264 |||||||||||||||||||| Sbjct: 119076 gcttctctgctgcctcctcc 119095
>gb|AE003624.3| Drosophila melanogaster chromosome 2L, section 33 of 83 of the complete sequence Length = 270771 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 213387 tgacgggcacgggcagggcg 213406
>gb|AC005839.1|AC005839 Homo sapiens chromosome 17, clone hRPK.481_C_4, complete sequence Length = 128328 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ttattctgaaacaaatttat 71 |||||||||||||||||||| Sbjct: 113602 ttattctgaaacaaatttat 113621
>dbj|D45025.1|RABPCA Oryctolagus cuniculus mRNA for potassium channel, complete cds Length = 1866 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tgacgggcacgggcagggcg 366 |||||||||||||||||||| Sbjct: 1511 tgacgggcacgggcagggcg 1492
>gb|BC057057.1| Mus musculus Cdc2-related kinase, arginine/serine-rich, mRNA (cDNA clone IMAGE:6826281) Length = 2623 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cttctctgctgcctcctcct 265 |||||||||||||||||||| Sbjct: 763 cttctctgctgcctcctcct 744
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgatctcgtcgacggcggcg 210 |||||||||||||||||||| Sbjct: 1047631 cgatctcgtcgacggcggcg 1047612
>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12 Length = 148498 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 tgccccctcctccttctcgtctttctgg 306 |||||||||||||||||| ||| ||||| Sbjct: 120739 tgccccctcctccttctcttctctctgg 120712
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gccgatctcgtcgacggcggcggg 212 ||||||||||||||||||| |||| Sbjct: 238650 gccgatctcgtcgacggcgacggg 238673
>dbj|AP003158.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-662M24, complete sequences Length = 194260 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttcatctccttcattttctg 188 |||||||||||||||||||| Sbjct: 139731 ttcatctccttcattttctg 139712
>dbj|AP003156.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-56O15, complete sequences Length = 162128 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttcatctccttcattttctg 188 |||||||||||||||||||| Sbjct: 3770 ttcatctccttcattttctg 3751
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tctgaaacaaatttatgact 75 |||||||||||||||||||| Sbjct: 107615 tctgaaacaaatttatgact 107634
>gb|AC126445.5| Mus musculus BAC clone RP23-307P24 from 8, complete sequence Length = 167770 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tctccttctctgtcttcttc 333 |||||||||||||||||||| Sbjct: 158102 tctccttctctgtcttcttc 158121
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cctcctccttgagcttctca 276 |||||||||||||||||||| Sbjct: 1758763 cctcctccttgagcttctca 1758782
>gb|U49855.1|HSRARB1S1 Human retinoic acid receptor beta 1 (RARbeta1) gene, 5' region and exon 1 Length = 682 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcggcggggccgggggctgg 224 |||||||||||||||||||| Sbjct: 438 gcggcggggccgggggctgg 457
>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence Length = 228138 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tctccttctctgtcttcttc 333 |||||||||||||||||||| Sbjct: 113768 tctccttctctgtcttcttc 113787
>gb|AC171211.1| Mus musculus BAC clone RP23-34I14 from chromosome 16, complete sequence Length = 230462 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttcatctccttcattttctg 188 |||||||||||||||||||| Sbjct: 130687 ttcatctccttcattttctg 130668
>dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A4, complete sequence Length = 159758 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 tgccccctcctccttctcgtctttctgg 306 |||||||||||||||||| ||| ||||| Sbjct: 71410 tgccccctcctccttctcttctctctgg 71383
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tccttctctgtcttcttctt 335 |||||||||||||||||||| Sbjct: 108240 tccttctctgtcttcttctt 108221
>emb|Y07701.1|HSAMINPEP H.sapiens mRNA for aminopeptidase Length = 3747 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccctcctccttctcgtctt 301 |||||||||||||||||||| Sbjct: 339 cccctcctccttctcgtctt 358
>gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map 3p, complete sequence Length = 217778 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gcttctctgctgcctcctcc 264 |||||||||||||||||||| Sbjct: 97624 gcttctctgctgcctcctcc 97605
>dbj|AB020711.2| Homo sapiens mRNA for KIAA0904 protein, partial cds Length = 5896 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cttctctgctgcctcctcct 265 |||||||||||||||||||| Sbjct: 4076 cttctctgctgcctcctcct 4057 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,337,010 Number of Sequences: 3902068 Number of extensions: 6337010 Number of successful extensions: 148932 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 146264 Number of HSP's gapped (non-prelim): 2649 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
