ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23o06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196865.1| Oryza sativa (japonica cultivar-group) putative... 159 1e-35
2gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 159 1e-35
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
6dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
7gb|AC171733.1| Lycopersicon esculentum chromosome 11 clone C11HB... 44 0.42
8emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in ... 42 1.6
9ref|NM_102117.3| Arabidopsis thaliana unknown protein AT1G22700 ... 40 6.5
10ref|NM_180619.1| Arabidopsis thaliana unknown protein AT1G22700 ... 40 6.5
11gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence 40 6.5
12gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 6.5
13gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete se... 40 6.5
14gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 40 6.5
15gb|AC138615.3| Mus musculus BAC clone RP24-67A12 from chromosome... 40 6.5
16ref|XM_645061.1| Entamoeba histolytica HM-1:IMSS Ras guanine nuc... 40 6.5
17gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, comple... 40 6.5
18gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, comp... 40 6.5
19emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.5
20gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Ca... 40 6.5
21gb|AE012339.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.5
22gb|AC018499.3| Homo sapiens chromosome 3 clone RP11-267L16 map 3... 40 6.5
23gb|AF410279.1|AF410279 Arabidopsis thaliana At1g22700/T22J18_13 ... 40 6.5
24gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.5
25emb|BX814448.1|CNS0ADTY Arabidopsis thaliana Full-length cDNA Co... 40 6.5
26emb|BX813665.1|CNS0ADUP Arabidopsis thaliana Full-length cDNA Co... 40 6.5
27gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence 40 6.5
28gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J1... 40 6.5
29gb|AC122719.2| Homo sapiens chromosome 5 clone RP11-661C8, compl... 40 6.5
30emb|AL132718.5|CNS01DTG Human chromosome 14 DNA sequence BAC R-6... 40 6.5
31gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, c... 40 6.5
32emb|CT485604.3| Pan troglodytes chromosome X clone PTB-004I10 ma... 40 6.5
33gb|CP000221.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.5
34gb|CP000173.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.5
35emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-8... 40 6.5
36emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2... 40 6.5
37gb|BT001148.1| Arabidopsis thaliana At1g22700/T22J18_13 mRNA, co... 40 6.5
38gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3... 40 6.5
39gb|AC018502.6| Homo sapiens chromosome 3 clone RP11-327H17 map 3... 40 6.5
40emb|AL844565.2| Mouse DNA sequence from clone RP23-427L11 on chr... 40 6.5 
>ref|NM_196865.1| Oryza sativa (japonica cultivar-group) putative stress inducible
            protein (OSJNBa0042E19.1), mRNA
          Length = 1493

 Score =  159 bits (80), Expect = 1e-35
 Identities = 191/229 (83%)
 Strand = Plus / Minus

                                                                        
Query: 252  tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
            ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 1195 tcactgggactcccttgtacatgcccacacgctgctttaggtcatctcggcgtggcctgg 1136

                                                                        
Query: 312  ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgctgacgcga 371
            | ||| ||||||||||||||||||| |  ||||| ||||| ||| ||||||| |||   |
Sbjct: 1135 cgaccgtgttgtttggatcaaataggagtacctcctcgaatgccttgagcgcagacttca 1076

                                                                        
Query: 372  ggtccttctgntgctcatacgcgtcncctaggttgttccatgccgtcacatancccggtt 431
            | || ||||  |||||||| ||||| || ||||||||||| || |||||||| || || |
Sbjct: 1075 gatctttcttttgctcatatgcgtccccgaggttgttccaagctgtcacatagcctggct 1016

                                                             
Query: 432  ggagctccacagccttctcgaattgcttgattgccttgtccagtttgtt 480
            | ||||| ||||||||||| ||||||| ||| | |||||| ||||||||
Sbjct: 1015 gaagctcaacagccttctcaaattgctggatcgacttgtcaagtttgtt 967
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>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
             sequence
          Length = 149978

 Score =  159 bits (80), Expect = 1e-35
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                         
Query: 252   tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
             ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 55139 tcactgggactcccttgtacatgcccacacgctgctttaggtcatctcggcgtggcctgg 55198

                                                                         
Query: 312   ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgctgacgcga 371
             | ||| ||||||||||||||||||| |  ||||| ||||| ||| ||||||| |||   |
Sbjct: 55199 cgaccgtgttgtttggatcaaataggagtacctcctcgaatgccttgagcgcagacttca 55258

                                                                         
Query: 372   ggtccttctgntgctcatacgcgtcncctaggttgttccatgccgtcacatancccggtt 431
             | || ||||  |||||||| ||||| || ||||||||||| || |||||||| || || |
Sbjct: 55259 gatctttcttttgctcatatgcgtccccgaggttgttccaagctgtcacatagcctggct 55318

                                                              
Query: 432   ggagctccacagccttctcgaattgcttgattgccttgtccagtttgtt 480
             | ||||| ||||||||||| ||||||| ||| | |||||| ||||||||
Sbjct: 55319 gaagctcaacagccttctcaaattgctggatcgacttgtcaagtttgtt 55367
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  159 bits (80), Expect = 1e-35
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                            
Query: 252      tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
                ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 16437040 tcactgggactcccttgtacatgcccacacgctgctttaggtcatctcggcgtggcctgg 16437099

                                                                            
Query: 312      ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgctgacgcga 371
                | ||| ||||||||||||||||||| |  ||||| ||||| ||| ||||||| |||   |
Sbjct: 16437100 cgaccgtgttgtttggatcaaataggagtacctcctcgaatgccttgagcgcagacttca 16437159

                                                                            
Query: 372      ggtccttctgntgctcatacgcgtcncctaggttgttccatgccgtcacatancccggtt 431
                | || ||||  |||||||| ||||| || ||||||||||| || |||||||| || || |
Sbjct: 16437160 gatctttcttttgctcatatgcgtccccgaggttgttccaagctgtcacatagcctggct 16437219

                                                                 
Query: 432      ggagctccacagccttctcgaattgcttgattgccttgtccagtttgtt 480
                | ||||| ||||||||||| ||||||| ||| | |||||| ||||||||
Sbjct: 16437220 gaagctcaacagccttctcaaattgctggatcgacttgtcaagtttgtt 16437268
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  159 bits (80), Expect = 1e-35
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                            
Query: 252      tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
                ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 16445281 tcactgggactcccttgtacatgcccacacgctgctttaggtcatctcggcgtggcctgg 16445340

                                                                            
Query: 312      ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgctgacgcga 371
                | ||| ||||||||||||||||||| |  ||||| ||||| ||| ||||||| |||   |
Sbjct: 16445341 cgaccgtgttgtttggatcaaataggagtacctcctcgaatgccttgagcgcagacttca 16445400

                                                                            
Query: 372      ggtccttctgntgctcatacgcgtcncctaggttgttccatgccgtcacatancccggtt 431
                | || ||||  |||||||| ||||| || ||||||||||| || |||||||| || || |
Sbjct: 16445401 gatctttcttttgctcatatgcgtccccgaggttgttccaagctgtcacatagcctggct 16445460

                                                                 
Query: 432      ggagctccacagccttctcgaattgcttgattgccttgtccagtttgtt 480
                | ||||| ||||||||||| ||||||| ||| | |||||| ||||||||
Sbjct: 16445461 gaagctcaacagccttctcaaattgctggatcgacttgtcaagtttgtt 16445509
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                            
Query: 252      tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
                ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 15768282 tcactgggactcccttgtacatgcccacacgctgcttcaggtcatctcggcgtggcctgg 15768223

                                                                    
Query: 312      ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgc 363
                | ||| ||||||| |||||||| || | |||||| ||||| ||| |||||||
Sbjct: 15768222 cgaccgtgttgttcggatcaaagaggagcacctcctcgaatgccttgagcgc 15768171
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>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0404D10
          Length = 155069

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                         
Query: 252   tcactggcacccccttgtacatgcccacgcgcgacttgaggtcatctcggcgtggccttg 311
             ||||||| || ||||||||||||||||| |||  ||| |||||||||||||||||||| |
Sbjct: 82738 tcactgggactcccttgtacatgcccacacgctgcttcaggtcatctcggcgtggcctgg 82679

                                                                 
Query: 312   ccaccttgttgtttggatcaaatagtaacacctcttcgaacgccctgagcgc 363
             | ||| ||||||| |||||||| || | |||||| ||||| ||| |||||||
Sbjct: 82678 cgaccgtgttgttcggatcaaagaggagcacctcctcgaatgccttgagcgc 82627
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>gb|AC171733.1| Lycopersicon esculentum chromosome 11 clone C11HBa0034I10, complete
             sequence
          Length = 95704

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 385   ctcatacgcgtcncctaggttgttccatgccgtcacatancccggttg 432
             |||||| || || || ||||||||||||||||| ||||| || |||||
Sbjct: 45526 ctcatatgcatcgccaaggttgttccatgccgtgacataaccaggttg 45479
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>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete
              sequence
          Length = 261927

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    tgttcaaaactgatgcaagaa 223
              |||||||||||||||||||||
Sbjct: 149208 tgttcaaaactgatgcaagaa 149228
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>ref|NM_102117.3| Arabidopsis thaliana unknown protein AT1G22700 transcript variant
           AT1G22700.2 mRNA, complete cds
          Length = 1111

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 918 catctcgccgaggccgagccaccttattgtttggatcaaa 879
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>ref|NM_180619.1| Arabidopsis thaliana unknown protein AT1G22700 transcript variant
           AT1G22700.1 mRNA, complete cds
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 912 catctcgccgaggccgagccaccttattgtttggatcaaa 873
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>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence
          Length = 162743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 253  cactggcacccccttgtaca 272
            ||||||||||||||||||||
Sbjct: 3143 cactggcacccccttgtaca 3162
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     cactggcacccccttgtaca 272
               ||||||||||||||||||||
Sbjct: 1100310 cactggcacccccttgtaca 1100329
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>gb|AC145793.2| Xenopus tropicalis clone CH216-157F1, complete sequence
          Length = 143148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aaccaccaatatgctacata 173
             ||||||||||||||||||||
Sbjct: 96900 aaccaccaatatgctacata 96919
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      gttatatgttgtaaatattg 27
              ||||||||||||||||||||
Sbjct: 565625 gttatatgttgtaaatattg 565606
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>gb|AC138615.3| Mus musculus BAC clone RP24-67A12 from chromosome 3, complete sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   ctacatacaacttctcatca 186
             ||||||||||||||||||||
Sbjct: 94747 ctacatacaacttctcatca 94728
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>ref|XM_645061.1| Entamoeba histolytica HM-1:IMSS Ras guanine nucleotide exchange
           factor (242.t00017) partial mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   ttgatttgttatatgttgta 20
           ||||||||||||||||||||
Sbjct: 883 ttgatttgttatatgttgta 864
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>gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, complete sequence
          Length = 132077

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttgttatatgttgtaaatat 25
             ||||||||||||||||||||
Sbjct: 40802 ttgttatatgttgtaaatat 40821
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>gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, complete sequence
          Length = 190630

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttgttatatgttgtaaatat 25
             ||||||||||||||||||||
Sbjct: 98825 ttgttatatgttgtaaatat 98844
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 107     cctcgaaagcaaattctaca 126
               ||||||||||||||||||||
Sbjct: 1770075 cctcgaaagcaaattctaca 1770094
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>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179187

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tacaacttctcatcatgttt 191
              ||||||||||||||||||||
Sbjct: 169555 tacaacttctcatcatgttt 169574
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>gb|AE012339.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 247
            of 460 of the complete genome
          Length = 10365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  catgcccacgcgcgacttga 290
            ||||||||||||||||||||
Sbjct: 1254 catgcccacgcgcgacttga 1235
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>gb|AC018499.3| Homo sapiens chromosome 3 clone RP11-267L16 map 3p, complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gatgctgcaaatgtgcccag 48
              ||||||||||||||||||||
Sbjct: 118929 gatgctgcaaatgtgcccag 118910
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>gb|AF410279.1|AF410279 Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds
          Length = 1110

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 919 catctcgccgaggccgagccaccttattgtttggatcaaa 880
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     catgcccacgcgcgacttga 290
               ||||||||||||||||||||
Sbjct: 2192567 catgcccacgcgcgacttga 2192586
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>emb|BX814448.1|CNS0ADTY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZF02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1039

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 867 catctcgccgaggccgagccaccttattgtttggatcaaa 828
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>emb|BX813665.1|CNS0ADUP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB31ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1070

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 904 catctcgccgaggccgagccaccttattgtttggatcaaa 865
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>gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence
          Length = 151538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   cactggcacccccttgtaca 272
             ||||||||||||||||||||
Sbjct: 29569 cactggcacccccttgtaca 29588
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>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete
             sequence
          Length = 84162

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 294   catctcggcgtggccttgccaccttgttgtttggatcaaa 333
             ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 50907 catctcgccgaggccgagccaccttattgtttggatcaaa 50868
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>gb|AC122719.2| Homo sapiens chromosome 5 clone RP11-661C8, complete sequence
          Length = 164798

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    ttcaaaactgatgcaagaat 224
              ||||||||||||||||||||
Sbjct: 154709 ttcaaaactgatgcaagaat 154728
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>emb|AL132718.5|CNS01DTG Human chromosome 14 DNA sequence BAC R-626P14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183009

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     gttatatgttgtaaatattg 27
             ||||||||||||||||||||
Sbjct: 40585 gttatatgttgtaaatattg 40566
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>gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, complete sequence
          Length = 246547

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      ttatatgttgtaaatattgc 28
              ||||||||||||||||||||
Sbjct: 155892 ttatatgttgtaaatattgc 155873
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>emb|CT485604.3| Pan troglodytes chromosome X clone PTB-004I10 map Xq28, complete
             sequence
          Length = 109609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tgttatatgttgtaaatatt 26
             ||||||||||||||||||||
Sbjct: 94762 tgttatatgttgtaaatatt 94781
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>gb|CP000221.1| Drosophila melanogaster genomic scaffold 211000022280740
          Length = 552562

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ttgatttgttatatgttgta 20
              ||||||||||||||||||||
Sbjct: 515471 ttgatttgttatatgttgta 515490
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>gb|CP000173.1| Drosophila melanogaster genomic scaffold 211000022279541
          Length = 57826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ttgatttgttatatgttgta 20
             ||||||||||||||||||||
Sbjct: 41767 ttgatttgttatatgttgta 41786
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>emb|AL109767.7|CNS018OX Human chromosome 14 DNA sequence BAC R-889B13 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184039

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gaattactgttactgacttg 99
            ||||||||||||||||||||
Sbjct: 8412 gaattactgttactgacttg 8393
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>emb|AL132819.6|CNS01DTO Human chromosome 14 DNA sequence BAC C-2200A16 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 140073

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gaattactgttactgacttg 99
             ||||||||||||||||||||
Sbjct: 33318 gaattactgttactgacttg 33299
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>gb|BT001148.1| Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds
          Length = 891

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 294 catctcggcgtggccttgccaccttgttgtttggatcaaa 333
           ||||||| || ||||  |||||||| ||||||||||||||
Sbjct: 829 catctcgccgaggccgagccaccttattgtttggatcaaa 790
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>gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3p, complete sequence
          Length = 182288

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gatgctgcaaatgtgcccag 48
              ||||||||||||||||||||
Sbjct: 165569 gatgctgcaaatgtgcccag 165588
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>gb|AC018502.6| Homo sapiens chromosome 3 clone RP11-327H17 map 3p, complete sequence
          Length = 198459

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gatgctgcaaatgtgcccag 48
              ||||||||||||||||||||
Sbjct: 118938 gatgctgcaaatgtgcccag 118919
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>emb|AL844565.2| Mouse DNA sequence from clone RP23-427L11 on chromosome 2, complete
             sequence
          Length = 95786

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 161   aatatgctacatacaacttctcat 184
             ||||||| ||||||||||||||||
Sbjct: 38585 aatatgccacatacaacttctcat 38562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,540,909
Number of Sequences: 3902068
Number of extensions: 3540909
Number of successful extensions: 59832
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59651
Number of HSP's gapped (non-prelim): 177
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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