Clone Name	rbaal1c10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clon...	513	e-142
2	dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clon...	513	e-142
3	dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mR...	513	e-142
4	ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predic...	460	e-126
5	gb|AY110243.1| Zea mays CL2786_1 mRNA sequence	339	7e-90
6	gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence	331	2e-87
7	gb|AY105052.1| Zea mays PCO138078 mRNA sequence	331	2e-87
8	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	137	5e-29
9	gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome...	137	5e-29
10	ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ pepti...	92	3e-15
11	ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ pepti...	92	3e-15
12	emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome s...	92	3e-15
13	gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds	92	3e-15
14	gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit ...	92	3e-15
15	gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta ...	92	3e-15
16	gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete s...	84	7e-13
17	gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-7...	78	4e-11
18	ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ pepti...	68	4e-08
19	ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ pepti...	68	4e-08
20	emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome s...	68	4e-08
21	gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete s...	68	4e-08
22	gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta ...	68	4e-08
23	dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	64	6e-07
24	dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	64	6e-07
25	gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit ...	60	1e-05
26	gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit ...	60	1e-05
27	ref|NM_131675.1| Danio rerio proteasome (prosome, macropain) sub...	46	0.15
28	emb|AL772368.5| Zebrafish DNA sequence from clone CH211-167P9 in...	46	0.15
29	ref|XM_701677.1| PREDICTED: Danio rerio similar to proteasome (p...	46	0.15
30	ref|XM_677810.1| PREDICTED: Danio rerio similar to proteasome (p...	46	0.15
31	gb|BC092728.1| Danio rerio proteasome (prosome, macropain) subun...	46	0.15
32	emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in ...	46	0.15
33	gb|AF155581.1|AF155581 Danio rerio proteasome subunit beta 7 (PS...	46	0.15
34	gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr...	44	0.60
35	ref|NM_001032780.1| Ciona intestinalis proteasome Z subunit (zet...	44	0.60
36	ref|XM_570084.1| Cryptococcus neoformans var. neoformans JEC21 p...	44	0.60
37	emb|Y13174.1|ATY13174 Arabidopsis thaliana mRNA for proteasome s...	44	0.60
38	emb|AJ002142.1|CIRNAPZS Ciona intestinalis mRNA for proteasome Z...	44	0.60
39	emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in l...	44	0.60
40	dbj|AK174283.1| Ciona intestinalis cDNA, clone:cicl021b24, full ...	44	0.60
41	dbj|AK173394.1| Ciona intestinalis cDNA, clone:cilv021p14, full ...	44	0.60
42	emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in l...	44	0.60
43	ref|XM_419843.1| PREDICTED: Gallus gallus similar to mRNA cappin...	42	2.4
44	emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1...	42	2.4
45	gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, com...	40	9.3
46	gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-...	40	9.3
47	gb|DQ443343.1| Bombyx mori proteasome subunit beta 7 mRNA, compl...	40	9.3
48	gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric re...	40	9.3
49	gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome...	40	9.3
50	emb|CR450742.13| Zebrafish DNA sequence from clone CH211-232A5 i...	40	9.3
51	gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome...	40	9.3
52	emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 ...	40	9.3
53	gb|CP000001.1| Bacillus cereus E33L, complete genome	40	9.3
54	ref|XM_962112.1| PREDICTED: Tribolium castaneum similar to neuro...	40	9.3
55	gb|AC069417.19| Homo sapiens 3 BAC RP11-385K11 (Roswell Park Can...	40	9.3
56	gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome...	40	9.3
57	gb|AY191819.1| Sus scrofa Ly49 (Ly49) mRNA, complete cds	40	9.3
58	gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswel...	40	9.3
59	gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswel...	40	9.3
60	ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA	40	9.3
61	gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c...	40	9.3
62	gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, r...	40	9.3
63	gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Canc...	40	9.3
64	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.3
65	ref|NM_214338.1| Sus scrofa killer cell lectin-like receptor sub...	40	9.3
66	emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 i...	40	9.3
67	emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF,...	40	9.3
68	gb|AC110518.20| Mus musculus chromosome 1, clone RP23-10P1, comp...	40	9.3
69	emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in ...	40	9.3
70	gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 ...	40	9.3
71	gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60...	40	9.3
72	gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ...	40	9.3
73	gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, r...	40	9.3
74	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	40	9.3
75	gb|AF064601.1|AF064601 Xenopus laevis homeobox protein (Vax1) mR...	40	9.3
76	gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138...	40	9.3
77	gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, com...	40	9.3

---

>dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full
            insert sequence
          Length = 1195

 Score =  513 bits (259), Expect = e-142
 Identities = 438/498 (87%)
 Strand = Plus / Minus

                                                                        
Query: 183  tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatnagcta 242
            ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  |  |
Sbjct: 1067 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 1008

                                                                        
Query: 243  cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 302
            |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 1007 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 948

                                                                        
Query: 303  tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 362
            ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 947  tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 888

                                                                        
Query: 363  agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 422
            |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 887  agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 828

                                                                        
Query: 423  cattgaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 482
            |||||||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 827  cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 768

                                                                        
Query: 483  ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 542
            |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 767  ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 708

                                                                        
Query: 543  tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 602
            |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 707  tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 648

                                                                        
Query: 603  tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 662
            | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 647  taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 588

                              
Query: 663  gggtcttcagtagtgtaa 680
            | | |||||||| |||||
Sbjct: 587  gcgacttcagtaatgtaa 570

---

>dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F11, full
           insert sequence
          Length = 750

 Score =  513 bits (259), Expect = e-142
 Identities = 438/498 (87%)
 Strand = Plus / Minus

                                                                       
Query: 183 tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatnagcta 242
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  |  |
Sbjct: 634 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 575

                                                                       
Query: 243 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 302
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 574 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 515

                                                                       
Query: 303 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 362
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 514 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 455

                                                                       
Query: 363 agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 422
           |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 454 agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 395

                                                                       
Query: 423 cattgaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 482
           |||||||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 394 cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 335

                                                                       
Query: 483 ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 542
           |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 334 ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 275

                                                                       
Query: 543 tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 602
           |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 274 tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 215

                                                                       
Query: 603 tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 662
           | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 214 taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 155

                             
Query: 663 gggtcttcagtagtgtaa 680
           | | |||||||| |||||
Sbjct: 154 gcgacttcagtaatgtaa 137

---

>dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mRNA for beta 2
           subunit of 20S proteasome, complete cds
          Length = 1122

 Score =  513 bits (259), Expect = e-142
 Identities = 438/498 (87%)
 Strand = Plus / Minus

                                                                       
Query: 183 tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatnagcta 242
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  |  |
Sbjct: 960 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 901

                                                                       
Query: 243 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 302
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 900 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 841

                                                                       
Query: 303 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 362
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 840 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 781

                                                                       
Query: 363 agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 422
           |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 780 agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 721

                                                                       
Query: 423 cattgaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 482
           |||||||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 720 cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 661

                                                                       
Query: 483 ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 542
           |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 660 ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 601

                                                                       
Query: 543 tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 602
           |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 600 tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 541

                                                                       
Query: 603 tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 662
           | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 540 taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 481

                             
Query: 663 gggtcttcagtagtgtaa 680
           | | |||||||| |||||
Sbjct: 480 gcgacttcagtaatgtaa 463

---

>ref|XM_476072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  460 bits (232), Expect = e-126
 Identities = 408/467 (87%)
 Strand = Plus / Minus

                                                                       
Query: 214 tcactcttccattgcatcaccatnagctacctctggcttcagcttcagctgcgtgatctt 273
           |||||| |||||||||||||| |  |  ||||||  |||| ||||||| || || |||||
Sbjct: 819 tcactcctccattgcatcaccctctgtcacctctaccttcggcttcagttgtgttatctt 760

                                                                       
Query: 274 tgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactgacaaaagt 333
           ||| ||||| ||| | || ||||||||| ||||| |||| ||||| ||||| ||  ||||
Sbjct: 759 tgtggacaacaccacagtctgccccttggtgaagttgtaccccttcgaactaacgtaagt 700

                                                                       
Query: 334 cctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggttatcacaca 393
           ||| || |||||||||| ||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 699 ccttggatttggtaactggtggtttctcaagtactctgtcttccccttggtgattacgca 640

                                                                       
Query: 394 aacatccacgttgctgccacttcccaagtcattgaagataccagcacggattgcctcggc 453
           ||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| ||
Sbjct: 639 aacatccacattgctgccactgcccaagtcattgaagataccaccacgaattgcctcagc 580

                                                                       
Query: 454 tacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactcaaacactga 513
            ||||||   ||||||||||||||||||||||||||| |||||||| | |||||||||||
Sbjct: 579 aacaagttgtattccctcctcccttgtgaggccttctttgtacttcgattcaaacactga 520

                                                                       
Query: 514 catcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatg 573
           ||| || |||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 519 cattgccgcaagggatccagaacccattgtggcaaaaggaagagtgtccgtggagccatg 460

                                                                       
Query: 574 cggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagc 633
            |||||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 459 tggataaacagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagc 400

                                                          
Query: 634 actgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaa 680
           ||||||||||||||||||| |||||||||| | |||||||| |||||
Sbjct: 399 actgacatgaccttggtagctaaaaaggtgcgacttcagtaatgtaa 353

---

>gb|AY110243.1| Zea mays CL2786_1 mRNA sequence
          Length = 1029

 Score =  339 bits (171), Expect = 7e-90
 Identities = 330/383 (86%)
 Strand = Plus / Plus

                                                                       
Query: 266 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 325
           ||||||||||  ||||| ||||| || ||||||||| ||||||| |||||||||||||| 
Sbjct: 467 gtgatctttgcggacaacacctcagtctgccccttggtgaagctatatccctttgaacta 526

                                                                       
Query: 326 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 385
           ||| |||| || || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 527 acataagttctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 586

                                                                       
Query: 386 atcacacaaacatccacgttgctgccacttcccaagtcattgaagataccagcacggatt 445
           ||||| || |||||||| ||||| ||||| |||||||||||||||||||| ||||  |||
Sbjct: 587 atcacgcagacatccacattgcttccactacccaagtcattgaagatacctgcacatatt 646

                                                                       
Query: 446 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 505
           || || |  || |||   |||||||| ||||| |||||||| ||| | |||||| | |||
Sbjct: 647 gcttctgacaccagttgtattccctcttccctagtgaggccctctttatacttcgattca 706

                                                                       
Query: 506 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 565
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 707 aacactgacattgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcagtg 766

                                                                       
Query: 566 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 625
           ||||| || |||||||||||||| ||||| ||||||||   ||| ||||| |||||||||
Sbjct: 767 gagccgtgtggataaacagtgtgaagatgcggtccagtacaatccactccaccaagaaca 826

                                  
Query: 626 agagcagcactgacatgaccttg 648
           || |||||||||||||| |||||
Sbjct: 827 agggcagcactgacatggccttg 849

---

>gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence
          Length = 1144

 Score =  331 bits (167), Expect = 2e-87
 Identities = 353/415 (85%)
 Strand = Plus / Minus

                                                                       
Query: 266 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 325
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 866 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 807

                                                                       
Query: 326 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 385
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 806 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 747

                                                                       
Query: 386 atcacacaaacatccacgttgctgccacttcccaagtcattgaagataccagcacggatt 445
           ||||| || || ||||||||||| ||||| |||||||||||||| |||||||||| ||||
Sbjct: 746 atcacgcagacgtccacgttgctcccactacccaagtcattgaaaataccagcacagatt 687

                                                                       
Query: 446 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 505
           || |||   ||||     |||||||||||||| || ||||||||| |||||||| | |||
Sbjct: 686 gcttcgcacacaatctgtattccctcctccctagtaaggccttctttgtacttcgattca 627

                                                                       
Query: 506 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 565
           ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 626 aacactgacattgcagcaagagaaccagagcccatggtggcaaaaggaagagtatcagtg 567

                                                                       
Query: 566 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 625
           || || || |||||||||||||||| |||||| |||||   ||| ||||| |||||||||
Sbjct: 566 gacccgtgtggataaacagtgtgtaaatgtggcccagtacaatccactccaccaagaaca 507

                                                                  
Query: 626 agagcagcactgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaa 680
           || |||||||||||||| ||||| || || || ||||| | ||||||||||||||
Sbjct: 506 agggcagcactgacatggccttgatacttgaagaggtgtgacttcagtagtgtaa 452

---

>gb|AY105052.1| Zea mays PCO138078 mRNA sequence
          Length = 1368

 Score =  331 bits (167), Expect = 2e-87
 Identities = 353/415 (85%)
 Strand = Plus / Minus

                                                                       
Query: 266 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 325
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 960 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 901

                                                                       
Query: 326 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 385
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 900 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 841

                                                                       
Query: 386 atcacacaaacatccacgttgctgccacttcccaagtcattgaagataccagcacggatt 445
           ||||| || || ||||||||||| ||||| |||||||||||||| |||||||||| ||||
Sbjct: 840 atcacgcagacgtccacgttgctcccactacccaagtcattgaaaataccagcacagatt 781

                                                                       
Query: 446 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 505
           || |||   ||||     |||||||||||||| || ||||||||| |||||||| | |||
Sbjct: 780 gcttcgcacacaatctgtattccctcctccctagtaaggccttctttgtacttcgattca 721

                                                                       
Query: 506 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 565
           ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 720 aacactgacattgcagcaagagaaccagagcccatggtggcaaaaggaagagtatcagtg 661

                                                                       
Query: 566 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 625
           || || || |||||||||||||||| |||||| |||||   ||| ||||| |||||||||
Sbjct: 660 gacccgtgtggataaacagtgtgtaaatgtggcccagtacaatccactccaccaagaaca 601

                                                                  
Query: 626 agagcagcactgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaa 680
           || |||||||||||||| ||||| || || || ||||| | ||||||||||||||
Sbjct: 600 agggcagcactgacatggccttgatacttgaagaggtgtgacttcagtagtgtaa 546

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                           
Query: 478     tgtgaggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacc 537
               ||||||||||||| |||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 5279388 tgtgaggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacc 5279329

                                                            
Query: 538     catcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
               ||| ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 5279328 cattgtggcaaaaggaagagtgtccgtggagccatgtggataaac 5279284



 Score =  103 bits (52), Expect = 7e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                           
Query: 378     ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattgaagataccag 437
               ||||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||| 
Sbjct: 5279630 ccttggtgattacgcaaacatccacattgctgccactgcccaagtcattgaagataccac 5279571

                                                       
Query: 438     cacggattgcctcggctacaagtgcaattccctcctccct 477
               |||| |||||||| || ||||||   ||||||||||||||
Sbjct: 5279570 cacgaattgcctcagcaacaagttgtattccctcctccct 5279531



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                           
Query: 581     acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 640
               |||||||| || ||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 5279201 acagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagcactgaca 5279142

                                 
Query: 641     tgaccttggtagttaaaa 658
               |||||||||||| |||||
Sbjct: 5279141 tgaccttggtagctaaaa 5279124



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                           
Query: 183     tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatnagcta 242
               ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  |  |
Sbjct: 5280342 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 5280283

                                                       
Query: 243     cctctggcttcagcttcagctgcgtgatctttgtagacaa 282
               |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 5280282 cctctaccttcggcttcagttgtgttatctttgtggacaa 5280243



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                           
Query: 293     tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 352
               ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 5280147 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 5280088

                                           
Query: 353     tggtttctcaagtactctgtattcccct 380
               |||||||||||||||||||| |||||||
Sbjct: 5280087 tggtttctcaagtactctgtcttcccct 5280060

---

>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                         
Query: 478   tgtgaggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacc 537
             ||||||||||||| |||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 16089 tgtgaggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacc 16030

                                                          
Query: 538   catcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
             ||| ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 16029 cattgtggcaaaaggaagagtgtccgtggagccatgtggataaac 15985



 Score =  103 bits (52), Expect = 7e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 378   ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattgaagataccag 437
             ||||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||| 
Sbjct: 16331 ccttggtgattacgcaaacatccacattgctgccactgcccaagtcattgaagataccac 16272

                                                     
Query: 438   cacggattgcctcggctacaagtgcaattccctcctccct 477
             |||| |||||||| || ||||||   ||||||||||||||
Sbjct: 16271 cacgaattgcctcagcaacaagttgtattccctcctccct 16232



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                         
Query: 581   acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 640
             |||||||| || ||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 15902 acagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagcactgaca 15843

                               
Query: 641   tgaccttggtagttaaaa 658
             |||||||||||| |||||
Sbjct: 15842 tgaccttggtagctaaaa 15825



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 183   tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatnagcta 242
             ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |  |  |
Sbjct: 17043 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 16984

                                                     
Query: 243   cctctggcttcagcttcagctgcgtgatctttgtagacaa 282
             |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 16983 cctctaccttcggcttcagttgtgttatctttgtggacaa 16944



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                         
Query: 293   tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 352
             ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 16848 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 16789

                                         
Query: 353   tggtttctcaagtactctgtattcccct 380
             |||||||||||||||||||| |||||||
Sbjct: 16788 tggtttctcaagtactctgtcttcccct 16761

---

>ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.1 mRNA, complete cds
          Length = 1228

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 511 accttggtag 502



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 756 tccacgttgctaccactacccaggtcattgaatatacc 719

---

>ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.2 mRNA, complete cds
          Length = 1230

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 511 accttggtag 502



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 756 tccacgttgctaccactacccaggtcattgaatatacc 719

---

>emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome subunit prcfa
          Length = 1068

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 593 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 534

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 533 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 474

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 473 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 414

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 413 accttggtag 404



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 658 tccacgttgctaccactacccaggtcattgaatatacc 621

---

>gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds
          Length = 822

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 573 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 514

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 513 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 454

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 453 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 394

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 393 accttggtag 384



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 638 tccacgttgctaccactacccaggtcattgaatatacc 601

---

>gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit (PBB1) (At3g27430)
           mRNA, complete cds
          Length = 1067

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 511 accttggtag 502



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 756 tccacgttgctaccactacccaggtcattgaatatacc 719

---

>gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta subunit PBB1 (PBB1) mRNA,
           complete cds
          Length = 1068

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 593 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 534

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 533 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 474

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 473 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 414

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 413 accttggtag 404



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 658 tccacgttgctaccactacccaggtcattgaatatacc 621

---

>gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete sequence
          Length = 1120

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 153/190 (80%)
 Strand = Plus / Minus

                                                                       
Query: 463 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 522
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 666 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 607

                                                                       
Query: 523 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 582
           ||| || || |||||||| || || || |||||||| || || || || || || || | 
Sbjct: 606 aagagaacccgaacccattgtagcgaatggaagagtgtcagttgaaccgtgtgggtatat 547

                                                                       
Query: 583 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 642
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 546 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 487

                     
Query: 643 accttggtag 652
           ||||||||||
Sbjct: 486 accttggtag 477



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 731 tccacgttgctaccactacccaggtcattgaatatacc 694

---

>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence
          Length = 116865

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                          
Query: 378    ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattgaagataccag 437
              |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 106030 ccttggttatcacacaaacatcaacattacttccacttcccaagtcattaaatataccag 106089

                 
Query: 438    cac 440
              |||
Sbjct: 106090 cac 106092



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                          
Query: 580    aacagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgac 639
              ||||||||||| ||| ||||||||||  || || || |||||||| |  |||||   |||
Sbjct: 107640 aacagtgtgtaaatgcggtccagtgatgtcaaccccaccaagaactaaggcagctgagac 107699

                          
Query: 640    atgaccttggta 651
              ||||||||||||
Sbjct: 107700 atgaccttggta 107711

---

>ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.1 mRNA, complete cds
          Length = 1176

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 682 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 623

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 622 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 563

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 562 acaagagcagctgagacatggccttggtag 533

---

>ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.2 mRNA, complete cds
          Length = 1106

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 612 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 553

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 552 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 493

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 492 acaagagcagctgagacatggccttggtag 463

---

>emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome subunit prcfc
          Length = 866

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 365 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 306

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 305 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 246

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 245 acaagagcagctgagacatggccttggtag 216

---

>gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete sequence
          Length = 1176

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 682 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 623

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 622 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 563

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 562 acaagagcagctgagacatggccttggtag 533

---

>gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta subunit PBB2 (PBB2) mRNA,
           complete cds
          Length = 1085

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 573 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 514

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 513 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 454

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 453 acaagagcagctgagacatggccttggtag 424

---

>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 581   acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 640
             ||||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||
Sbjct: 54334 acagtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagaca 54275

                         
Query: 641   tgaccttggtag 652
             ||||||||||||
Sbjct: 54274 tgaccttggtag 54263



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 398   tccacgttgctgccacttcccaagtcattgaagatacc 435
             ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 54692 tccacgttgctaccactacccaggtcattgaatatacc 54655

---

>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 503   tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagt 558
             |||||||||||||| ||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 23947 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagt 24002

---

>gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 957

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           ||||||||||||||  |||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 533 tcaaacactgacatgacagcaagggaaccagaacccattgtagcaaatggtagagtgtca 474

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 473 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 414

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 413 acaagagcagctgagacatggccttggtag 384

---

>gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 1105

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 503 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 562
           ||||||||||||||  |||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 612 tcaaacactgacatgacagcaagggaaccagaacccattgtagcaaatggtagagtgtca 553

                                                                       
Query: 563 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 622
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 552 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 493

                                         
Query: 623 acaagagcagcactgacatgaccttggtag 652
           |||||||||||   |||||| |||||||||
Sbjct: 492 acaagagcagctgagacatggccttggtag 463

---

>ref|NM_131675.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 7
           (psmb7), mRNA
          Length = 969

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 cccaagtcattgaagataccagc 438
           |||||||||||||||||||||||
Sbjct: 638 cccaagtcattgaagataccagc 616

---

>emb|AL772368.5| Zebrafish DNA sequence from clone CH211-167P9 in linkage group 21
              Contains a novel gene similar to human and rodent NR6A1
              (nuclear receptor subfamily 6, group A, member 1), a novel
              gene similar to Carassius auratus FTZ-F1, the psmb7 gene
              for proteasome (prosome, macropain) subunit, beta type, 7,
              a novel gene similar to human NEK7 (NIMA (never in mitosis
              gene a)-related kinase 7) and two CpG islands, complete
              sequence
          Length = 162620

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 416    cccaagtcattgaagataccagc 438
              |||||||||||||||||||||||
Sbjct: 125599 cccaagtcattgaagataccagc 125577

---

>ref|XM_701677.1| PREDICTED: Danio rerio similar to proteasome (prosome, macropain)
           subunit, beta type, 7, transcript variant 2 (LOC572683),
           mRNA
          Length = 888

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 cccaagtcattgaagataccagc 438
           |||||||||||||||||||||||
Sbjct: 581 cccaagtcattgaagataccagc 559

---

>ref|XM_677810.1| PREDICTED: Danio rerio similar to proteasome (prosome, macropain)
           subunit, beta type, 7, transcript variant 1 (LOC572683),
           mRNA
          Length = 979

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 cccaagtcattgaagataccagc 438
           |||||||||||||||||||||||
Sbjct: 653 cccaagtcattgaagataccagc 631

---

>gb|BC092728.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 7,
           mRNA (cDNA clone MGC:110090 IMAGE:7283805), complete cds
          Length = 969

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 cccaagtcattgaagataccagc 438
           |||||||||||||||||||||||
Sbjct: 638 cccaagtcattgaagataccagc 616

---

>emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in linkage group 5, complete
              sequence
          Length = 151863

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 113    aaaatacatccatttttctgttc 135
              |||||||||||||||||||||||
Sbjct: 101516 aaaatacatccatttttctgttc 101538

---

>gb|AF155581.1|AF155581 Danio rerio proteasome subunit beta 7 (PSMB7) mRNA, partial cds
          Length = 962

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 cccaagtcattgaagataccagc 438
           |||||||||||||||||||||||
Sbjct: 626 cccaagtcattgaagataccagc 604

---

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 607     atctactccgccaagaacaaga 628
               ||||||||||||||||||||||
Sbjct: 1713091 atctactccgccaagaacaaga 1713112

---

>ref|NM_001032780.1| Ciona intestinalis proteasome Z subunit (zeta), mRNA
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 607 atctactccgccaagaacaagagcagcactgacatgaccttg 648
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 501 atctactcctcccagcaccaaagcagcactgacatgaccttg 460

---

>ref|XM_570084.1| Cryptococcus neoformans var. neoformans JEC21
           phosphatidyl-N-methylethanolamine N-methyltransferase
           (CND06200) partial mRNA
          Length = 948

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 607 atctactccgccaagaacaaga 628
           ||||||||||||||||||||||
Sbjct: 649 atctactccgccaagaacaaga 670

---

>emb|Y13174.1|ATY13174 Arabidopsis thaliana mRNA for proteasome subunit prcfb
          Length = 600

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 398 tccacgttgctgccacttcccaagtcattgaagatacc 435
           ||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 176 tccacgttgctaccactacccaggtcattgaatatacc 139

---

>emb|AJ002142.1|CIRNAPZS Ciona intestinalis mRNA for proteasome Z subunit
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 607 atctactccgccaagaacaagagcagcactgacatgaccttg 648
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 501 atctactcctcccagcaccaaagcagcactgacatgaccttg 460

---

>emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in linkage group 22,
             complete sequence
          Length = 57918

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 142   aagcactgagaaaaaagaagaaatgg 167
             ||||||||| ||||||||||||||||
Sbjct: 33366 aagcactgaaaaaaaagaagaaatgg 33341

---

>dbj|AK174283.1| Ciona intestinalis cDNA, clone:cicl021b24, full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 607 atctactccgccaagaacaagagcagcactgacatgaccttg 648
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 478 atctactcctcccagcaccaaagcagcactgacatgaccttg 437

---

>dbj|AK173394.1| Ciona intestinalis cDNA, clone:cilv021p14, full insert sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 607 atctactccgccaagaacaagagcagcactgacatgaccttg 648
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 477 atctactcctcccagcaccaaagcagcactgacatgaccttg 436

---

>emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in linkage group 22, complete
              sequence
          Length = 155796

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 142    aagcactgagaaaaaagaagaaatgg 167
              ||||||||| ||||||||||||||||
Sbjct: 107650 aagcactgaaaaaaaagaagaaatgg 107675

---

>ref|XM_419843.1| PREDICTED: Gallus gallus similar to mRNA capping enzyme
           (LOC421819), mRNA
          Length = 3106

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 504 caaacactgacatcgcagcaa 524
           |||||||||||||||||||||
Sbjct: 559 caaacactgacatcgcagcaa 539

---

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 294     gccccttgttgaagctgtatc 314
               |||||||||||||||||||||
Sbjct: 2497372 gccccttgttgaagctgtatc 2497392

---

>gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, complete sequence
          Length = 198062

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  catttttctgttctagaaca 142
            ||||||||||||||||||||
Sbjct: 1318 catttttctgttctagaaca 1337

---

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     agaaatggcgcaaattctta 179
               ||||||||||||||||||||
Sbjct: 1001598 agaaatggcgcaaattctta 1001617

---

>gb|DQ443343.1| Bombyx mori proteasome subunit beta 7 mRNA, complete cds
          Length = 1044

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 416 cccaagtcattgaagataccagca 439
           |||||||||||||| |||||||||
Sbjct: 759 cccaagtcattgaatataccagca 736

---

>gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric repeat sequence
          Length = 157

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tgagaaaaaagaagaaatgg 167
           ||||||||||||||||||||
Sbjct: 148 tgagaaaaaagaagaaatgg 129

---

>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence
          Length = 185838

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   ctagaacaagcactgagaaa 154
             ||||||||||||||||||||
Sbjct: 13938 ctagaacaagcactgagaaa 13919

---

>emb|CR450742.13| Zebrafish DNA sequence from clone CH211-232A5 in linkage group 3,
              complete sequence
          Length = 172729

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     agggtctgcattaaattcag 102
              ||||||||||||||||||||
Sbjct: 149476 agggtctgcattaaattcag 149457

---

>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ctagaacaagcactgagaaa 154
              ||||||||||||||||||||
Sbjct: 150305 ctagaacaagcactgagaaa 150286

---

>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17,
             complete sequence
          Length = 198387

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   cactgagaaaaaagaagaaatggc 168
             |||||||||| |||||||||||||
Sbjct: 49849 cactgagaaataagaagaaatggc 49826

---

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     agaaatggcgcaaattctta 179
               ||||||||||||||||||||
Sbjct: 1134799 agaaatggcgcaaattctta 1134818

---

>ref|XM_962112.1| PREDICTED: Tribolium castaneum similar to neuron navigator 2 isoform
            2 (LOC655559), mRNA
          Length = 5778

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 503  tcaaacactgacatcgcagc 522
            ||||||||||||||||||||
Sbjct: 3693 tcaaacactgacatcgcagc 3712

---

>gb|AC069417.19| Homo sapiens 3 BAC RP11-385K11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gtacaacaaaatacatccat 125
             ||||||||||||||||||||
Sbjct: 68694 gtacaacaaaatacatccat 68713

---

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     atacatccatttttctgttctaga 139
               |||||| |||||||||||||||||
Sbjct: 1082850 atacatacatttttctgttctaga 1082873

---

>gb|AY191819.1| Sus scrofa Ly49 (Ly49) mRNA, complete cds
          Length = 991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aaaatacatccatttttctg 132
           ||||||||||||||||||||
Sbjct: 474 aaaatacatccatttttctg 455

---

>gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171622

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ctggcttcagcttcagctgc 265
             ||||||||||||||||||||
Sbjct: 96939 ctggcttcagcttcagctgc 96958

---

>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ggcttcagcttcagctgcgt 267
              ||||||||||||||||||||
Sbjct: 145850 ggcttcagcttcagctgcgt 145831

---

>ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 ggcttcagcttcagctgcgt 267
           ||||||||||||||||||||
Sbjct: 290 ggcttcagcttcagctgcgt 271

---

>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   atacatccatttttctgttctaga 139
             |||||| |||||||||||||||||
Sbjct: 80303 atacatacatttttctgttctaga 80326

---

>gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, region 21E-21F, BAC clone
             BACR30G21, complete sequence
          Length = 168370

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctctggcttcagcttcagct 263
             ||||||||||||||||||||
Sbjct: 36068 ctctggcttcagcttcagct 36049

---

>gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 145877

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 622    aacaagagcagcactgacat 641
              ||||||||||||||||||||
Sbjct: 104202 aacaagagcagcactgacat 104221

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     atacatccatttttctgttctaga 139
               |||||| |||||||||||||||||
Sbjct: 1082850 atacatacatttttctgttctaga 1082873

---

>ref|NM_214338.1| Sus scrofa killer cell lectin-like receptor subfamily A, member 1
           (LY49), mRNA
          Length = 991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aaaatacatccatttttctg 132
           ||||||||||||||||||||
Sbjct: 474 aaaatacatccatttttctg 455

---

>emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 in linkage group 17,
              complete sequence
          Length = 182325

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     agggtctgcattaaattcag 102
              ||||||||||||||||||||
Sbjct: 151857 agggtctgcattaaattcag 151876

---

>emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF, gvpG and gvpH genes
          Length = 5110

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 tgagaaaaaagaagaaatgg 167
           ||||||||||||||||||||
Sbjct: 439 tgagaaaaaagaagaaatgg 458

---

>gb|AC110518.20| Mus musculus chromosome 1, clone RP23-10P1, complete sequence
          Length = 198526

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   catttttctgttctagaaca 142
             ||||||||||||||||||||
Sbjct: 56461 catttttctgttctagaaca 56442

---

>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17, complete
              sequence
          Length = 232846

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    cactgagaaaaaagaagaaatggc 168
              |||||||||| |||||||||||||
Sbjct: 152867 cactgagaaataagaagaaatggc 152890

---

>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the complete
             sequence
          Length = 308447

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctctggcttcagcttcagct 263
             ||||||||||||||||||||
Sbjct: 73191 ctctggcttcagcttcagct 73172

---

>gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60 of 83 of the complete
              sequence
          Length = 196398

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    ctggcttcagcttcagctgc 265
              ||||||||||||||||||||
Sbjct: 107603 ctggcttcagcttcagctgc 107622

---

>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
             sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggcttcagcttcagctgcgt 267
             ||||||||||||||||||||
Sbjct: 32540 ggcttcagcttcagctgcgt 32521

---

>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone
            DS04710, complete sequence
          Length = 72327

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  ggcttcagcttcagctgcgt 267
            ||||||||||||||||||||
Sbjct: 4064 ggcttcagcttcagctgcgt 4045

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     atacatccatttttctgttctaga 139
               |||||| |||||||||||||||||
Sbjct: 1082847 atacatacatttttctgttctaga 1082870

---

>gb|AF064601.1|AF064601 Xenopus laevis homeobox protein (Vax1) mRNA, complete cds
          Length = 888

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 615 cgccaagaacaagagcagca 634
           ||||||||||||||||||||
Sbjct: 171 cgccaagaacaagagcagca 190

---

>gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138)) DNA sequence, complete
             sequence
          Length = 79454

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctctggcttcagcttcagct 263
             ||||||||||||||||||||
Sbjct: 40545 ctctggcttcagcttcagct 40526

---

>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence
          Length = 224088

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   ctgttctagaacaagcactgagaa 153
             |||||||||||||| |||||||||
Sbjct: 67173 ctgttctagaacaatcactgagaa 67150


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,866,615
Number of Sequences: 3902068
Number of extensions: 6866615
Number of successful extensions: 147467
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147016
Number of HSP's gapped (non-prelim): 446
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---