>N4BP2_HUMAN (Q86UW6) NEDD4-binding protein 2 (EC 3.-.-.-) (N4BP2) (BCL-3-binding|
            protein)
          Length = 1770

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
 Frame = -1

Query: 537  NIKELYSIQSRLAQEKARENIYXQRIQMPELQGLIQEQNPAIDLCGXHASEAMHVLNNEL 358
            N+   Y+ Q  L ++K +E  +   I++ E           +DL G H  EA+  L   L
Sbjct: 1650 NVATFYAQQGTLHEQKMKEANHLAAIEIFEKVNASLLPQNVLDLHGLHVDEALEHLMRVL 1709

Query: 357  NNRRKIARSTGRRLQAIIIX-----NPRTPARLTAAIEQYLLEXGLQYTQAQPGLFRVLL 193
              + +  +  G +    +I      +    AR+  A+ +YL+    ++++ +PG  +V+L
Sbjct: 1710 EKKTEEFKQNGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKVML 1769

Query: 192  Q 190
            +
Sbjct: 1770 K 1770

>HEATR_DROME (Q9VM75) Hypothetical protein CG10805|
          Length = 2096

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 136 FSFHLIMSTNT*AVPATSLQQDAEEARLCLRVLKAXLQEILLDGGGQPRRGTW 294
           F   L+ +T   A+ +T   Q  +E RLCLR+L+    ++  +   QP R  W
Sbjct: 759 FLLTLVKNTKWTALASTPWNQMTDELRLCLRLLEIICAQVFSEKADQPERQEW 811

>DECR2_PONPY (Q5RBV3) Peroxisomal 2,4-dienoyl-CoA reductase (EC 1.3.1.34)|
           (2,4-dienoyl-CoA reductase 2)
          Length = 292

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 402 GXHASEAMHVLNNELNNRRKIARSTGRRLQAIIIXNPRTPARLTAAIEQYLLEXG 238
           G H   A   L   L   RK+A +TGRR   + + + R P  + AA++Q L E G
Sbjct: 52  GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM-DVRAPPAIVAAVDQALKEFG 105

>Y1626_HAEIN (P44278) Hypothetical protein HI1626|
          Length = 238

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 12  FYNVFADKKSLIYQHYNQLFVAVSFLFCYSSLPYTVQVILFFF 140
           F N+F  K   +Y+ ++ ++ A + +F   +L Y  QV+ F F
Sbjct: 49  FLNLFKGKNLELYKKWSVIYFAAAVIFAIPALIYNWQVLYFMF 91

>DECR2_HUMAN (Q9NUI1) Peroxisomal 2,4-dienoyl-CoA reductase (EC 1.3.1.34)|
           (2,4-dienoyl-CoA reductase 2) (pDCR)
          Length = 292

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 402 GXHASEAMHVLNNELNNRRKIARSTGRRLQAIIIXNPRTPARLTAAIEQYLLEXG 238
           G H   A   L   L   RK+A +TGRR   + + + R P  + AA++Q L E G
Sbjct: 52  GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM-DVRAPPAVMAAVDQALKEFG 105

>CPHA_SYNY3 (P73833) Cyanophycin synthetase (EC 6.-.-.-)|
          Length = 873

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 235 KAXLQEILLDGGGQPRRGTWVXYYDGLEPAARGSGDLPPVVE 360
           K   + IL D G    RGT + Y+D LE A    G  P V++
Sbjct: 220 KEGTKTILQDAGIPVPRGTTIQYFDDLEEAINDVGGYPVVIK 261

>PKP2_HUMAN (Q99959) Plakophilin-2|
          Length = 881

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = -1

Query: 588 QDRQAFLTGGNPLAKELNIKELYSIQSRLA--QEKARENIYXQRIQMPELQGLIQEQNPA 415
           Q  +  L  G+P  K+  I  L ++   L+   E A+E +       P+L  +I +  P+
Sbjct: 732 QHTRKMLHVGDPSVKKTAISLLRNLSRNLSLQNEIAKETL-------PDLVSIIPDTVPS 784

Query: 414 IDLCGXHASEAMHVLNNELNNRRKIAR 334
            DL     + A + LNN + N  + AR
Sbjct: 785 TDLLIETTASACYTLNNIIQNSYQNAR 811


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,098,965
Number of Sequences: 219361
Number of extensions: 1715611
Number of successful extensions: 4291
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4290
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)