ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23n15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 234 bits (118), Expect = 2e-58 Identities = 339/412 (82%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 678328 tcatctccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagt 678387 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 678388 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 678447 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 678448 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 678507 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 678508 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 678567 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 678568 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 678627 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || |||||||| ||||||||||||| Sbjct: 678628 tttctccattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagata 678687 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 678688 atttcaaaggcatttaagtttgtcactgacatgggcttcacatcttcatgag 678739
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 234 bits (118), Expect = 2e-58 Identities = 339/412 (82%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 678328 tcatctccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagt 678387 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 678388 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 678447 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 678448 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 678507 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 678508 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 678567 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 678568 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 678627 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || |||||||| ||||||||||||| Sbjct: 678628 tttctccattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagata 678687 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 678688 atttcaaaggcatttaagtttgtcactgacatgggcttcacatcttcatgag 678739
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 234 bits (118), Expect = 2e-58 Identities = 339/412 (82%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 100806 tcatctccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagt 100747 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 100746 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 100687 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 100686 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 100627 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 100626 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 100567 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 100566 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 100507 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || |||||||| ||||||||||||| Sbjct: 100506 tttctccattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagata 100447 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 100446 atttcaaaggcatttaagtttgtcactgacatgggcttcacatcttcatgag 100395
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 210 bits (106), Expect = 4e-51 Identities = 336/412 (81%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| | ||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 629874 tcatctccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagt 629933 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 629934 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 629993 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 629994 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 630053 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 630054 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 630113 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 630114 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 630173 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || ||||| || ||||||||||||| Sbjct: 630174 tttctccattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagata 630233 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || ||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 630234 atttcaaaagcatttaagtttgtcactgacatgggcttcacatcttcatgag 630285 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 3070232 ttccttccttccttcctcgtt 3070212 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 28226559 cgttccttccttccttcctc 28226540
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 210 bits (106), Expect = 4e-51 Identities = 336/412 (81%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| | ||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 629874 tcatctccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagt 629933 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 629934 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 629993 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 629994 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 630053 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 630054 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 630113 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 630114 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 630173 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || ||||| || ||||||||||||| Sbjct: 630174 tttctccattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagata 630233 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || ||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 630234 atttcaaaagcatttaagtttgtcactgacatgggcttcacatcttcatgag 630285 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 3079263 ttccttccttccttcctcgtt 3079243 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 28211436 cgttccttccttccttcctc 28211417
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 210 bits (106), Expect = 4e-51 Identities = 336/412 (81%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| | ||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 113098 tcatctccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagt 113039 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 113038 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 112979 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 112978 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 112919 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 112918 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 112859 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 112858 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 112799 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || ||||| || ||||||||||||| Sbjct: 112798 tttctccattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagata 112739 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || ||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 112738 atttcaaaagcatttaagtttgtcactgacatgggcttcacatcttcatgag 112687
>dbj|AK121773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092J11, full insert sequence Length = 2044 Score = 202 bits (102), Expect = 9e-49 Identities = 335/412 (81%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| | ||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 1757 tcatctccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagt 1698 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 1697 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 1638 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || ||||| ||||| ||||||| | |||| |||||||| ||||||||| Sbjct: 1637 gtggtaacctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctc 1578 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 ||||||||| || || |||||||| |||||||||||||||||||| | |||||| || Sbjct: 1577 ccttgcatcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgct 1518 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || |||||||||||||||| ||| Sbjct: 1517 acatcttctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctca 1458 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || ||||| || | ||||||||||| Sbjct: 1457 tttctccattcctttacaatgaacatgccagagagatcaaatcccttagagaaagagata 1398 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || ||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 1397 atttcaaaagcatttaagtttgtcactgacatgggcttcacatcttcatgag 1346
>gb|AF004947.1|AF004947 Oryza sativa protein kinase mRNA, complete cds Length = 2055 Score = 202 bits (102), Expect = 9e-49 Identities = 335/412 (81%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 126 tcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctccaac 182 |||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 1789 tcatctccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagt 1730 Query: 183 agctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggtgggaa 242 |||| ||||||||||| | ||| |||| ||||||||||||||| |||| || | |||| Sbjct: 1729 agctgtcggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaa 1670 Query: 243 ggtgtgatctcgaagatctccatgtctaactgaacagcaccgttccttccttccttcctc 302 | || | ||| || || | ||||| ||||||| | |||| |||||||||||||||||| Sbjct: 1669 gtggtaacctcaaatatttttatgtcaaactgaagaacaccattccttccttccttcctc 1610 Query: 303 gtttgcatctttaccacgccattgtccttcttccttaccctgagattcatcgccttcgcg 362 |||||| || || || |||||||| || ||||||||||||||||| | |||||| || Sbjct: 1609 ccttgcattttcactacaccattgtcttttttccttaccctgagatttagcgcctttgca 1550 Query: 363 acgtattccagcttcgagatgatggctgaagcaggcttgtctgaagtgaaccttgtctcc 422 || | ||| ||||| ||||| |||| ||| |||| || | |||||||||||||| ||| Sbjct: 1549 acatcttctagctttgagattatggttgaggcagatttatttgaagtgaaccttgcctca 1490 Query: 423 tttctgcactcctcttggatgaataggccagataggtcaaaccctgtggagaaagagatg 482 ||||| || |||| | ||||| | |||||| || |||||||| ||||||||||||| Sbjct: 1489 tttctccattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagata 1430 Query: 483 atctcaaaggcatttaagtttgtcagcatcaggggcttcacatcttcatgag 534 || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1429 atttcaaaggcatttaagtttgtcactgacatgggcttcacatcttcatgag 1378
>gb|AY110373.1| Zea mays CL46074_1 mRNA sequence Length = 661 Score = 95.6 bits (48), Expect = 1e-16 Identities = 101/118 (85%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 123 tggtcatctccataccaggcccagactatgtccttcagcgctggccggatg---tcctcc 179 ||||||||||||| |||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 262 tggtcatctccatgccaggcccagactatgtccttcagtgctggccggatgtactcttcc 321 Query: 180 aacagctctcggtactccagcggatcaccacctgtttgtttcatctcaatgaggtggt 237 ||||| | |||||| || | |||||| || |||||||||||||| |||||||||| Sbjct: 322 aacagtttcttgtactcaagtgaatcaccgcccgtttgtttcatctcgatgaggtggt 379 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 321 ccattgtccttcttccttaccctgagattcatcgccttcgcgacgtattccagcttcgag 380 ||||||||||||||||||||||||| ||||| || || || || | ||| ||||||||| Sbjct: 463 ccattgtccttcttccttaccctgaaattcagggcttttgcaacatcttcaagcttcgag 522 Query: 381 atgatgg 387 ||||||| Sbjct: 523 atgatgg 529
>ref|XM_600895.2| PREDICTED: Bos taurus similar to Stem cell growth factor precursor (Lymphocyte secreted C-type lectin) (p47) (C-type lectin superfamily member 3) (LOC522611), mRNA Length = 1208 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 280 caccgttccttccttccttcctcg 303 |||||||||||||||||||||||| Sbjct: 1049 caccgttccttccttccttcctcg 1072
>emb|BX469913.15| Zebrafish DNA sequence from clone DKEY-237G5 in linkage group 20, complete sequence Length = 196927 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgcatcttta 315 ||||||||||||||||| |||||||| |||| Sbjct: 75389 ttccttccttccttccttgtttgcattttta 75419 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgcatcttta 315 ||||||||||||||||| |||||||| |||| Sbjct: 71294 ttccttccttccttccttgtttgcattttta 71324
>gb|AC158579.7| Mus musculus chromosome 7, clone RP24-180F12, complete sequence Length = 179049 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 272 ctgaacagcaccgttccttccttccttcct 301 |||||| ||||| ||||||||||||||||| Sbjct: 152678 ctgaactgcacccttccttccttccttcct 152649
>gb|AY663433.1| Homo sapiens isolate fa0190 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82958 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663432.1| Homo sapiens isolate fa0180 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82964 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663431.1| Homo sapiens isolate fa0178 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82952 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55065 ttccttccttccttcctcgttt 55086
>gb|AY663430.1| Homo sapiens isolate fa0175 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82953 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55059 ttccttccttccttcctcgttt 55080
>gb|AY663429.1| Homo sapiens isolate fa0173 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82953 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55059 ttccttccttccttcctcgttt 55080
>gb|AY663428.1| Homo sapiens isolate fa0154 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82975 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55080 ttccttccttccttcctcgttt 55101
>gb|AY663427.1| Homo sapiens isolate fa0152 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82968 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663426.1| Homo sapiens isolate fa0149 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82958 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663425.1| Homo sapiens isolate fa0148 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82952 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55064 ttccttccttccttcctcgttt 55085
>gb|AY663424.1| Homo sapiens isolate fa0144 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82968 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55079 ttccttccttccttcctcgttt 55100
>gb|AY663423.1| Homo sapiens isolate fa0141 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82951 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55066 ttccttccttccttcctcgttt 55087
>gb|AY663422.1| Homo sapiens isolate fa0140 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82957 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663421.1| Homo sapiens isolate fa0142 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82971 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55076 ttccttccttccttcctcgttt 55097
>gb|AY663420.1| Homo sapiens isolate fa0138 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82960 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663419.1| Homo sapiens isolate fa0137 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82960 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|AY663418.1| Homo sapiens isolate fa0134 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82982 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55079 ttccttccttccttcctcgttt 55100
>gb|AY663417.1| Homo sapiens isolate fa0150 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82971 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55078 ttccttccttccttcctcgttt 55099
>gb|AY663416.1| Homo sapiens isolate fa0176 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) genes, complete cds, alternatively spliced Length = 82974 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55084 ttccttccttccttcctcgttt 55105
>gb|AC158947.4| Mus musculus chromosome 7, clone RP23-230A4, complete sequence Length = 191195 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 ctgaacagcaccgttccttccttccttcct 301 |||||| ||||| ||||||||||||||||| Sbjct: 59070 ctgaactgcacccttccttccttccttcct 59099
>gb|DQ181567.1| Homo sapiens isolate fa1313 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82968 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55077 ttccttccttccttcctcgttt 55098
>gb|DQ181566.1| Homo sapiens isolate fa1311 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82984 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55074 ttccttccttccttcctcgttt 55095
>gb|DQ181565.1| Homo sapiens isolate fa1310 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82958 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55063 ttccttccttccttcctcgttt 55084
>gb|DQ181564.1| Homo sapiens isolate fa1308 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82983 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55079 ttccttccttccttcctcgttt 55100
>gb|DQ181563.1| Homo sapiens isolate fa1306 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82971 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55072 ttccttccttccttcctcgttt 55093
>gb|DQ181562.1| Homo sapiens isolate fa1197 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82974 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55071 ttccttccttccttcctcgttt 55092
>gb|DQ181561.1| Homo sapiens isolate fa1194 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82970 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55075 ttccttccttccttcctcgttt 55096
>gb|DQ181560.1| Homo sapiens isolate fa1193 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82968 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55077 ttccttccttccttcctcgttt 55098
>gb|DQ181559.1| Homo sapiens isolate fa1191 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82978 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55078 ttccttccttccttcctcgttt 55099
>gb|DQ181558.1| Homo sapiens isolate fa1190 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82968 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55072 ttccttccttccttcctcgttt 55093
>gb|DQ181557.1| Homo sapiens isolate fa1016 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82971 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55079 ttccttccttccttcctcgttt 55100
>gb|DQ181556.1| Homo sapiens isolate fa1015 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82977 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55076 ttccttccttccttcctcgttt 55097
>gb|DQ181555.1| Homo sapiens isolate fa1014 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82985 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55083 ttccttccttccttcctcgttt 55104
>gb|DQ181554.1| Homo sapiens isolate fa1013 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82962 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55070 ttccttccttccttcctcgttt 55091
>gb|DQ181553.1| Homo sapiens isolate fa1012 immunoglobulin superfamily member 4B (IGSF4B) gene, complete cds; and Duffy blood group (FY) gene, complete cds, alternatively spliced Length = 82984 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 55081 ttccttccttccttcctcgttt 55102
>emb|AL035403.10|HS134P22 Human DNA sequence from clone CTA-134P22 on chromosome 1q21.2-22 Contains the 5' end of the AIM2 gene for absent in melanoma 2, the IGSF4B gene for immunoglobulin superfamily, member 4B, the FY gene for Duffy blood group and a novel transcript, complete sequence Length = 118951 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 82708 ttccttccttccttcctcgttt 82729
>gb|AC093002.4| Homo sapiens 3q BAC RP11-490H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70707 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 52481 ttccttccttccttcctcgttt 52460 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 52429 ttccttccttccttcctcgttt 52408
>gb|AC110187.11| Mus musculus chromosome 7, clone RP24-541E23, complete sequence Length = 181046 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 272 ctgaacagcaccgttccttccttccttcct 301 |||||| ||||| ||||||||||||||||| Sbjct: 141638 ctgaactgcacccttccttccttccttcct 141609
>dbj|AP002535.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 4/4 Length = 239684 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 134110 ttccttccttccttcctcgttt 134131
>dbj|AB045365.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:622b6, complete sequence Length = 126549 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgttt 306 |||||||||||||||||||||| Sbjct: 20975 ttccttccttccttcctcgttt 20996
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 75602 ttccttccttccttcctcgtt 75582
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 106379 ttccttccttccttcctcgtt 106359
>gb|AC146059.4| Pan troglodytes BAC clone RP43-14K1 from 7, complete sequence Length = 210466 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 32054 ccgttccttccttccttcctc 32074
>gb|AC079306.7| Homo sapiens BAC clone CTD-2506A20 from 7, complete sequence Length = 70638 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 39256 ttccttccttccttcctcgtt 39276
>gb|AC112662.7| Mus musculus chromosome 5, clone RP23-467F2, complete sequence Length = 200679 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 22228 ttccttccttccttcctcgtt 22248
>gb|AC145867.2| Pan troglodytes BAC clone RP43-21B15 from 7, complete sequence Length = 152616 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 37551 ccgttccttccttccttcctc 37571
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 aaaccctgtggagaaagagat 481 ||||||||||||||||||||| Sbjct: 70464 aaaccctgtggagaaagagat 70444
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 aaaccctgtggagaaagagat 481 ||||||||||||||||||||| Sbjct: 49488 aaaccctgtggagaaagagat 49468
>emb|AL592103.10| Human DNA sequence from clone RP11-62I21 on chromosome 1 Contains a novel gene and a novel pseudogene, complete sequence Length = 101020 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 76606 ccgttccttccttccttcctc 76626
>emb|AL646044.13| Mouse DNA sequence from clone RP23-269O5 on chromosome 11, complete sequence Length = 197473 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 acacacaagcatgtaaaatag 38 ||||||||||||||||||||| Sbjct: 72984 acacacaagcatgtaaaatag 72964
>emb|BX908814.1| Tetraodon nigroviridis Length = 120100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 31545 ccgttccttccttccttcctc 31525
>gb|AC040165.6| Homo sapiens chromosome 16 clone RP11-420O6, complete sequence Length = 209756 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 29576 ccgttccttccttccttcctc 29596
>gb|AC159131.2| Pan troglodytes BAC clone CH251-316K21 from chromosome unknown, complete sequence Length = 167507 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcctc 302 ||||||||||||||||||||| Sbjct: 13172 ccgttccttccttccttcctc 13192
>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence Length = 209174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 14235 ttccttccttccttcctcgtt 14215
>gb|AC161272.3| Mus musculus BAC clone RP23-56M19 from chromosome 9, complete sequence Length = 192003 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 cagcaccgttccttccttccttcct 301 ||||||| ||||||||||||||||| Sbjct: 125922 cagcacccttccttccttccttcct 125898
>gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, complete sequence Length = 209585 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtt 305 ||||||||||||||||||||| Sbjct: 113803 ttccttccttccttcctcgtt 113823
>emb|AL596116.14| Mouse DNA sequence from clone RP23-317F9 on chromosome 11, complete sequence Length = 217735 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtttgca 309 |||||||||||||||||| |||||| Sbjct: 88752 ttccttccttccttcctcctttgca 88728
>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence Length = 189789 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 80242 ccgttccttccttccttcct 80261
>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence Length = 193859 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gaggtggtgggaaggtgtga 249 |||||||||||||||||||| Sbjct: 84954 gaggtggtgggaaggtgtga 84973
>gb|AY817668.1| Homo sapiens arsenic (+3 oxidation state) methyltransferase (AS3MT) gene, complete cds Length = 38888 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 7844 ccgttccttccttccttcct 7825
>gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, complete sequence Length = 142451 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 67099 ttccttccttccttcctcctttgc 67076
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 31659 cgttccttccttccttcctc 31640
>gb|AC132412.2| Mus musculus BAC clone RP23-355N5 from chromosome 6, complete sequence Length = 171747 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 agatgatctcaaaggcattt 497 |||||||||||||||||||| Sbjct: 169683 agatgatctcaaaggcattt 169702
>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 81997 ttccttccttccttcctcttttgc 82020
>gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24.3, complete sequence Length = 345524 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 155117 cgttccttccttccttcctc 155098
>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence Length = 232699 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gaggtggtgggaaggtgtga 249 |||||||||||||||||||| Sbjct: 14535 gaggtggtgggaaggtgtga 14516
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtgaaccttgtctcctttct 427 |||||||||||||||||||| Sbjct: 15665016 gtgaaccttgtctcctttct 15665035
>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence Length = 189787 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 30695 cgttccttccttccttcctc 30676
>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence Length = 178898 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 94968 ccgttccttccttccttcct 94987
>gb|AC125075.4| Mus musculus BAC clone RP23-468P13 from chromosome 19, complete sequence Length = 188709 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 37706 ccgttccttccttccttcct 37725
>gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosome 16, complete sequence Length = 180726 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 127510 cgttccttccttccttcctc 127529
>gb|AC126025.4| Mus musculus BAC clone RP24-461L18 from chromosome 14, complete sequence Length = 164636 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 149984 ccgttccttccttccttcct 149965
>gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence Length = 180056 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 72155 ccgttccttccttccttcct 72174
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 agcaccgttccttccttccttcct 301 |||||| ||||||||||||||||| Sbjct: 96086 agcacctttccttccttccttcct 96109
>gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome 8, complete sequence Length = 215638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 140182 ccgttccttccttccttcct 140163
>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence Length = 234158 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 37237 cgttccttccttccttcctc 37218
>gb|AC100764.5| Homo sapiens, clone RP11-257B4, complete sequence Length = 70384 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 2903 ccgttccttccttccttcct 2884
>gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosome 10, complete sequence Length = 211025 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 110919 ccgttccttccttccttcct 110938
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 150799 ttccttccttccttcctcttttgc 150776
>gb|AC005017.1| Homo sapiens BAC clone GS1-214N13 from 7, complete sequence Length = 137176 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 67057 ccgttccttccttccttcct 67076
>gb|AC102339.16| Mus musculus chromosome 18, clone RP24-573J7, complete sequence Length = 170154 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 8819 ccgttccttccttccttcct 8838
>emb|AL391416.9| Human DNA sequence from clone RP11-378G13 on chromosome 6, complete sequence Length = 125378 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 25235 cgttccttccttccttcctc 25216
>emb|AL358790.22| Human DNA sequence from clone RP11-753C18 on chromosome 10 Contains three novel genes, the CYP17A1 gene for cytochrome P450 17A1, a profilin 1 (PFN1) pseudogene, the gene for methyltransferase cyt19, an unactive progesterone receptor 23 kD (TEBP) pseudogene, a ribosomal protein L22 (RPL22) pseudogene and a CpG island, complete sequence Length = 131753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 99405 ccgttccttccttccttcct 99386
>emb|AL357073.19| Human DNA sequence from clone RP11-231K24 on chromosome 9 Contains the BARX1 gene for BarH-like homeobox 1, a novel gene and three CpG islands, complete sequence Length = 103667 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 atattttctacaaagacacacaagcatgtaaa 34 |||||||||||| | ||||||| ||||||||| Sbjct: 27125 atattttctacacacacacacatgcatgtaaa 27156
>emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chromosome 13 Contains a glycogenin (GYG) pseudogene, complete sequence Length = 135345 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 40300 cgttccttccttccttcctc 40281
>emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3), complete sequence Length = 158737 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 13746 cgttccttccttccttcctc 13765 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 13572 cgttccttccttccttcctc 13591
>emb|AL161793.9| Human DNA sequence from clone RP11-23I7 on chromosome 1q32.1-32.3 Contains the 5' end of the LRRN5 gene for leucine rich repeat neuronal 5 and a novel gene, complete sequence Length = 162345 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 145673 ccgttccttccttccttcct 145692
>emb|AL139415.10| Human DNA sequence from clone RP3-477M7 on chromosome 1 Contains the ENO1 gene for enolase 1 (alpha), two novel genes, a novel pseudogene, a pseudogene similar to part of a Zinc finger protein, a pseudogene similar to part of cytochrome oxidase subunit II, the CA6 gene for carbonic anhydrase VI and a CpG island, complete sequence Length = 141428 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 126696 ttccttccttccttcctcctttgc 126719
>gb|AC025029.16| Homo sapiens 3 BAC RP11-442C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92601 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 44300 ccgttccttccttccttcct 44319
>emb|AL049736.10|HSDJ723E3 Human DNA sequence from clone RP4-723E3 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 73112 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgt 304 |||||||||||||||||||| Sbjct: 16749 ttccttccttccttcctcgt 16768
>gb|AC157581.2| Mus musculus chromosome 18, clone RP24-249P15, complete sequence Length = 176836 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 141983 ccgttccttccttccttcct 141964
>emb|AL031290.1|HS774I24 Human DNA sequence from clone RP4-774I24 on chromosome 1q24.1-24.3 Contains the 3' end of the PLAC3 gene for placenta-specific 3 (PLAC3) and the 3' end of the ASTN gene for astrotactin, complete sequence Length = 121780 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgc 308 ||||||||||||||||| |||||| Sbjct: 88327 ttccttccttccttccttgtttgc 88350
>gb|AC079944.17| Homo sapiens 3 BAC RP11-435F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126295 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 94745 cgttccttccttccttcctc 94726
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 agcaccgttccttccttccttcct 301 |||||| ||||||||||||||||| Sbjct: 133911 agcacctttccttccttccttcct 133888
>emb|AJ851412.1| Gallus gallus mRNA for hypothetical protein, clone 2d13 Length = 6904 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctgaacagcaccgttccttc 291 |||||||||||||||||||| Sbjct: 5298 ctgaacagcaccgttccttc 5317
>gb|AC105449.8| Homo sapiens chromosome 8, clone RP11-152B5, complete sequence Length = 159789 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 150722 cgttccttccttccttcctc 150741
>gb|AY986513.1| Soranthera ulvoidea voucher CNUK PE120 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 970 ccgttccttccttccttcct 951
>gb|AY986512.1| Soranthera ulvoidea voucher CNUK PE118 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 970 ccgttccttccttccttcct 951
>gb|AY986511.1| Soranthera ulvoidea voucher CNUK PE117 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 970 ccgttccttccttccttcct 951
>gb|AY986510.1| Soranthera ulvoidea voucher CNUK PE116 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 970 ccgttccttccttccttcct 951
>gb|AY986509.1| Soranthera ulvoidea voucher CNUK PE115 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 970 ccgttccttccttccttcct 951
>emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chromosome 11 Contains the 3' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9, a novel gene, a novel gene (2310079P12Rik), the Hand1 gene for heart and neural crest derivatives expressed transcript 1 (eHAND, Thing1), a mitochondrial ribosomal protein S16 pseudogene (Mrps16) and two CpG islands, complete sequence Length = 132671 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 49901 ccgttccttccttccttcct 49882
>emb|BX957361.10| Zebrafish DNA sequence from clone DKEY-269O24 in linkage group 4 Contains two novel genes and a CpG island, complete sequence Length = 116445 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 aaaccctgtggagaaagaga 480 |||||||||||||||||||| Sbjct: 61501 aaaccctgtggagaaagaga 61482
>ref|NM_001012697.1| Gallus gallus membrane associated guanylate kinase, WW and PDZ domain containing 3 (MAGI3), mRNA Length = 6904 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctgaacagcaccgttccttc 291 |||||||||||||||||||| Sbjct: 5298 ctgaacagcaccgttccttc 5317
>emb|CR627155.1| Homo sapiens mRNA; cDNA DKFZp686F18211 (from clone DKFZp686F18211) Length = 3986 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 2753 cgttccttccttccttcctc 2772
>dbj|AB088685.1| Gallus gallus avUCP mRNA for uncoupling protein, complete cds Length = 1402 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 1382 cgttccttccttccttcctc 1363
>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence Length = 165022 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 6694 ccgttccttccttccttcct 6675
>gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, complete sequence Length = 207040 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 129469 ccgttccttccttccttcct 129488
>gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, complete sequence Length = 160853 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 58983 ccgttccttccttccttcct 58964
>ref|NM_204107.1| Gallus gallus uncoupling protein 3 (mitochondrial, proton carrier) (UCP3), mRNA Length = 1550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 1387 cgttccttccttccttcctc 1368
>dbj|AK148759.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120442P12 product:unclassifiable, full insert sequence Length = 5840 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 agatgatctcaaaggcattt 497 |||||||||||||||||||| Sbjct: 3724 agatgatctcaaaggcattt 3705
>gb|AC013458.5| Homo sapiens BAC clone RP11-85M11 from 3, complete sequence Length = 213532 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 116873 ccgttccttccttccttcct 116892
>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence Length = 170467 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 48051 ccgttccttccttccttcct 48070
>gb|AF433170.2|AF433170 Gallus gallus uncoupling protein (UCP) gene, complete cds Length = 2946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 2784 cgttccttccttccttcctc 2765
>gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, complete sequence Length = 209836 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 74158 ccgttccttccttccttcct 74177
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 ctacaaagacacacaagcatgtaaaata 37 ||||| ||||||||| |||||||||||| Sbjct: 179310 ctacatagacacacatgcatgtaaaata 179337
>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence Length = 174363 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 78828 cgttccttccttccttcctc 78847
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtgaaccttgtctcctttct 427 |||||||||||||||||||| Sbjct: 74970 gtgaaccttgtctcctttct 74989
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence Length = 202651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 106067 cgttccttccttccttcctc 106086
>gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, complete sequence Length = 171035 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 125910 ccgttccttccttccttcct 125929
>gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clone BAC djn082c10 containing GABRG2 gene, complete sequence Length = 195909 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 10431 ccgttccttccttccttcct 10450
>ref|NG_001475.1| Mus musculus testis specific protein-Y encoded, pseudogene (Tspy-ps) on chromosome Y Length = 3067 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cttcatgagtgttcttcctt 545 |||||||||||||||||||| Sbjct: 2326 cttcatgagtgttcttcctt 2307
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aagacacacaagcatgtaaa 34 |||||||||||||||||||| Sbjct: 229298 aagacacacaagcatgtaaa 229317
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtgaaccttgtctcctttct 427 |||||||||||||||||||| Sbjct: 15659550 gtgaaccttgtctcctttct 15659569
>emb|AL954637.6| Zebrafish DNA sequence from clone DKEY-149G8 in linkage group 6, complete sequence Length = 161867 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 32449 ccgttccttccttccttcct 32430
>gb|AC009144.5|AC009144 Homo sapiens chromosome 16 clone RP11-551E2, complete sequence Length = 173758 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 83440 ccgttccttccttccttcct 83421
>gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, complete sequence Length = 109568 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 90431 cgttccttccttccttcctc 90450
>gb|AC146411.4| Pan troglodytes BAC clone RP43-36G22 from chromosome 7, complete sequence Length = 162946 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 3 atattttctacaaagacacacaagcatgtaaa 34 |||||||||||| | ||||||| ||||||||| Sbjct: 131975 atattttctacacacacacacatgcatgtaaa 131944
>gb|AC093520.4| Homo sapiens chromosome 16 clone RP11-120K18, complete sequence Length = 168064 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 140269 ttccttccttccttcctcctttgc 140246
>gb|AF287144.1|AF287144 Gallus gallus mitochondrial uncoupling protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 1550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 1387 cgttccttccttccttcctc 1368
>gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complete sequence Length = 206021 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 131202 cgttccttccttccttcctc 131183
>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence Length = 200898 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 87367 cgttccttccttccttcctc 87348
>gb|AC137591.1| Homo sapiens chromosome X clone XX-B6cos map Xp22-PAR, complete sequence Length = 32799 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 27572 cgttccttccttccttcctc 27591
>gb|AC135335.3| Homo sapiens chromosome 18, clone RP13-1026H1, complete sequence Length = 155498 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 3051 ccgttccttccttccttcct 3070
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ccagcggatcaccacctgtt 215 |||||||||||||||||||| Sbjct: 5859054 ccagcggatcaccacctgtt 5859073
>dbj|BS000019.1| Pan troglodytes chromosome 22 clone:PTB-023I17, map 22, complete sequences Length = 141751 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 87058 ccgttccttccttccttcct 87039
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 agccgctgctggtggtcatc 130 |||||||||||||||||||| Sbjct: 2912189 agccgctgctggtggtcatc 2912208
>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence Length = 223470 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 17467 ccgttccttccttccttcct 17486
>gb|AC125270.7| Mus musculus chromosome 5, clone RP24-150L20, complete sequence Length = 174834 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 141890 ccgttccttccttccttcct 141909
>emb|AL133501.6|CNS01DV9 Human chromosome 14 DNA sequence BAC R-35B20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181838 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 137302 ccgttccttccttccttcct 137283
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 73681 ccgttccttccttccttcct 73700
>dbj|AP002436.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-627G1, complete sequence Length = 173509 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cttgtctcctttctgcactc 433 |||||||||||||||||||| Sbjct: 74612 cttgtctcctttctgcactc 74593
>dbj|AP003402.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-661I21, complete sequence Length = 187946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 cttgtctcctttctgcactc 433 |||||||||||||||||||| Sbjct: 152207 cttgtctcctttctgcactc 152188
>emb|AL935118.8| Mouse DNA sequence from clone RP23-464I16 on chromosome 2, complete sequence Length = 83723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 75707 ccgttccttccttccttcct 75688
>dbj|AB047066.1| Xenopus laevis mRNA for type XVIII collagen alpha1 chain, complete cds Length = 5598 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 aaccctgtggagaaagagat 481 |||||||||||||||||||| Sbjct: 878 aaccctgtggagaaagagat 897
>emb|CT033786.13| Mouse DNA sequence from clone RP24-298F18 on chromosome 14, complete sequence Length = 185421 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ttcacatcttcatgagtgtt 538 |||||||||||||||||||| Sbjct: 179657 ttcacatcttcatgagtgtt 179676
>dbj|AP005976.2| Homo sapiens genomic DNA, chromosome 8qtel, clone: KB1585H8, complete sequence Length = 226221 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 4563 cgttccttccttccttcctc 4544
>dbj|AB094629.1| Mus musculus iba2 gene for ionized calcium binding adapter molecule 2, complete cds Length = 25031 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 20511 cgttccttccttccttcctc 20530
>gb|AC005695.1|AC005695 Homo sapiens chromosome 17, clone hRPK.85_B_7, complete sequence Length = 173717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 accgttccttccttccttcc 300 |||||||||||||||||||| Sbjct: 67439 accgttccttccttccttcc 67458
>emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on chromosome 2, complete sequence Length = 142037 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ttccttccttccttcctcgt 304 |||||||||||||||||||| Sbjct: 129427 ttccttccttccttcctcgt 129408
>emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chromosome 2, complete sequence Length = 198946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 58890 cgttccttccttccttcctc 58871
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 56843 cgttccttccttccttcctc 56862
>gb|AF022800.1|AF022800 Mus musculus testis-specific Y-encoded protein (Tspy) pseudogene, partial sequence Length = 3067 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cttcatgagtgttcttcctt 545 |||||||||||||||||||| Sbjct: 2326 cttcatgagtgttcttcctt 2307
>gb|AC126037.4| Mus musculus BAC clone RP24-223I19 from 14, complete sequence Length = 189127 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 25280 ccgttccttccttccttcct 25261
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgt 304 |||||||||||||||||||| Sbjct: 71298 ttccttccttccttcctcgt 71317
>gb|AC128664.3| Mus musculus BAC clone RP24-328H10 from 6, complete sequence Length = 147041 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 agatgatctcaaaggcattt 497 |||||||||||||||||||| Sbjct: 45123 agatgatctcaaaggcattt 45142
>gb|AC149591.5| Mus musculus BAC clone RP23-332I9 from 18, complete sequence Length = 231381 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 143859 cgttccttccttccttcctc 143878
>gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, complete sequence Length = 224935 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttccttccttccttcctcgtttgc 308 |||||||||||||||||| ||||| Sbjct: 178575 ttccttccttccttcctcttttgc 178598
>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete sequence Length = 187876 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 157901 ccgttccttccttccttcct 157920
>gb|AY500132.1| Sus scrofa testis-specific phosphoglycerate kinase (PGK2) gene, complete cds Length = 3955 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgttccttccttccttcctc 302 |||||||||||||||||||| Sbjct: 414 cgttccttccttccttcctc 395
>emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chromosome 5, complete sequence Length = 179132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgttccttccttccttcct 301 |||||||||||||||||||| Sbjct: 43928 ccgttccttccttccttcct 43909
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 tcaccacctgtttgtttcatctca 227 |||||| ||||||||||||||||| Sbjct: 142399 tcaccaactgtttgtttcatctca 142376
>emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chromosome 2, complete sequence Length = 158498 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gagaaagagatgatctcaaa 490 |||||||||||||||||||| Sbjct: 93154 gagaaagagatgatctcaaa 93173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,529,523 Number of Sequences: 3902068 Number of extensions: 6529523 Number of successful extensions: 732516 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 729447 Number of HSP's gapped (non-prelim): 3030 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
