ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1c04 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 67.4 bits (163), Expect = 4e-11 Identities = 48/172 (27%), Positives = 80/172 (46%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F+S + ++E + G+S WW N + I SA L A + +LK L +T F VT Sbjct: 846 FMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTS 905 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K + D G L+ F + IP T + ++NIV + G A+ G Sbjct: 906 KATDDDDFGE--------LYAFKWTTLLIPPTTVLIINIVGVVAGISDAI--NNGYQSWG 955 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 168 P G+ W+++ +PF++GL+ R ++ P V + + L+ + F L R Sbjct: 956 PLFGKLFFSFWVIVHLYPFLKGLMGR-QNRTPTIVVIWSVLLASIFSLLWVR 1006
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 67.0 bits (162), Expect = 5e-11 Identities = 53/172 (30%), Positives = 82/172 (47%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 FLS ++E + G+ WW N + I SA L A ILK L +T F VT Sbjct: 884 FLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTS 943 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K +S DG D A+ L+ F + IP T L ++N+V + G A+ + G Sbjct: 944 K-ASDEDG----DFAE--LYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAI--NSGYQSWG 994 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 168 P G+ W+++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 995 PLFGKLFFAFWVIVHLYPFLKGLMGR-QNRTPTIVVVWSVLLASIFSLLWVR 1045
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 64.3 bits (155), Expect = 3e-10 Identities = 50/172 (29%), Positives = 83/172 (48%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F+S + ++E + G+S WW N + I SA L A +LK L +T F VT Sbjct: 899 FISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTS 958 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K ++ DG D A+ L+ F + IP T + ++N++ + G AV + G Sbjct: 959 K-ATDEDG----DFAE--LYIFKWTALLIPPTTVLLVNLIGIVAGVSYAV--NSGYQSWG 1009 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 168 P G+ W++ +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 1010 PLFGKLFFALWVIAHLYPFLKGLLGR-QNRTPTIVIVWSVLLASIFSLLWVR 1060
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 63.9 bits (154), Expect = 4e-10 Identities = 50/172 (29%), Positives = 82/172 (47%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F S + ++E K ++ WW N + I SA L A +LK +T F VT Sbjct: 886 FASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTS 945 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K +S DG D A+ L+ F + IP T + ++N+V + G A+ + G Sbjct: 946 K-ASDEDG----DFAE--LYVFKWTSLLIPPTTILLVNLVGIVAGVSYAI--NSGYQSWG 996 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 168 P +G+ + W+V +PF++GL+ R ++ P V V + L+ + F L R Sbjct: 997 PLMGKLLFAFWVVAHLYPFLKGLLGR-QNRTPTIVIVWSALLASIFSLLWVR 1047
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 61.6 bits (148), Expect = 2e-09 Identities = 41/146 (28%), Positives = 67/146 (45%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F+S + ++E + G+ WW N + I AS+ L A +LK L T F VT Sbjct: 903 FISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTS 962 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K A D A L+ F + IP T L ++NI+ + VG A+ + G Sbjct: 963 K--------AADDGAFSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAI--SNGYDSWG 1012 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSR 246 P G W+++ +PF++G++ + Sbjct: 1013 PLFGRLFFALWVIVHLYPFLKGMLGK 1038
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 60.5 bits (145), Expect = 5e-09 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 2/148 (1%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 FLS ++E + G+S W N + I SA L A +LK L +T F VT Sbjct: 867 FLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTS 926 Query: 503 KESSTSDGGAGTDEADP--GLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVH 330 K +S DEAD L+ F + IP T L +LN+V + G A+ Sbjct: 927 KGAS--------DEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAI--NNGYGS 976 Query: 329 GGPGIGEFVCCGWMVLCFWPFVRGLVSR 246 GP G+ W+++ +PF++GL+ R Sbjct: 977 WGPLFGKLFFAFWVIVHLYPFLKGLMGR 1004
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 57.8 bits (138), Expect = 3e-08 Identities = 38/125 (30%), Positives = 56/125 (44%) Frame = -1 Query: 620 WWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFT 441 WW N + I SA L A +LK L ET F VT K A D L+ Sbjct: 910 WWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSK--------AADDGEFSELYI 961 Query: 440 FDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGGPGIGEFVCCGWMVLCFWPFVR 261 F + IP T L ++N++ + VG A+ + GP G W++L +PF++ Sbjct: 962 FKWTSLLIPPTTLLIINVIGVIVGISDAI--SNGYDSWGPLFGRLFFAFWVILHLYPFLK 1019 Query: 260 GLVSR 246 GL+ + Sbjct: 1020 GLLGK 1024
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 56.6 bits (135), Expect = 7e-08 Identities = 45/172 (26%), Positives = 74/172 (43%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F+S + ++E + + WW N + I S+ L A +LK L T F VT Sbjct: 907 FMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTS 966 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K A D L+ F + IP T L ++NIV + VG A+ G Sbjct: 967 K--------AADDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAI--NNGYDSWG 1016 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSRGKHGIPWSVKVKAGLIVAAFVHLCTR 168 P G W+++ +PF++GL+ + + +P + V + L+ + L R Sbjct: 1017 PLFGRLFFALWVIVHLYPFLKGLLGK-QDRVPTIILVWSILLASILTLLWVR 1067
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 55.8 bits (133), Expect = 1e-07 Identities = 40/146 (27%), Positives = 66/146 (45%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F S I ++E + + WW N + I SA L A +LK L +T F VT Sbjct: 904 FSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTS 963 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K +D G +D L+ F + IP L ++N++ + VG A+ + G Sbjct: 964 K---AADDGEFSD-----LYLFKWTSLLIPPMTLLIINVIGVIVGVSDAI--SNGYDSWG 1013 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSR 246 P G W+++ +PF++GL+ + Sbjct: 1014 PLFGRLFFALWVIIHLYPFLKGLLGK 1039
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 54.7 bits (130), Expect = 3e-07 Identities = 40/146 (27%), Positives = 65/146 (44%) Frame = -1 Query: 683 FLSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR 504 F+S + ++E + G+S W N + I SA L A LK L +T F VT Sbjct: 803 FISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTS 862 Query: 503 KESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVVHGG 324 K + + G L+ + IP T+L ++N+V + G A+ G Sbjct: 863 KTADDLEFGE--------LYIVKWTTLLIPPTSLLIINLVGVVAGFSDAL--NKGYEAWG 912 Query: 323 PGIGEFVCCGWMVLCFWPFVRGLVSR 246 P G+ W++L +PF++GL+ R Sbjct: 913 PLFGKVFFAFWVILHLYPFLKGLMGR 938
>TRMB_BIFLO (Q8G3T4) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 286 Score = 34.3 bits (77), Expect = 0.36 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -3 Query: 177 LHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKA 73 +H+ + G G +N+GSV + LPLEHV K A + A Sbjct: 209 VHEVMDGLDGWKNLGSVTVSLPLEHVGKGNADMAA 243
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 33.9 bits (76), Expect = 0.47 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = +3 Query: 183 HERSHNQTSLHLDAPRDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGA 362 HE + + D+ R + ++ D+P H PE + ATA S RA DDG Sbjct: 39 HESGISPDTTPADSIRGAAVASPDQPLHGGPERE---ATAPSFSPTRA--------DDGP 87 Query: 363 PCPDG 377 PC DG Sbjct: 88 PCTDG 92
>MEP2_YEAST (P41948) Ammonium transporter MEP2| Length = 499 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = -1 Query: 620 WWNNHRMQ------RITSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEA 459 W N+H Q I +A AW + +++L T+ + S + GTD A Sbjct: 382 WINHHYKQVGYQLAGICAALAWTVTVTSILLLTMN----AIPFLKLRLSADEEELGTDAA 437 Query: 458 DPGLFTFDSAPVFIP 414 G FT++ + +IP Sbjct: 438 QIGEFTYEESTAYIP 452
>CAC1D_HUMAN (Q01668) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) Length = 2161 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Frame = -1 Query: 590 TSASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPV 411 +SAS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 649 SSASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ---- 693 Query: 410 TALSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 276 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 694 ---ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 736
>NCKX5_BRARE (Q49SH1) Sodium/potassium/calcium exchanger 5 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 5) (Solute carrier family 24 member 5) (Protein golden) Length = 513 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = -1 Query: 626 RAWWNNHRMQRITSASAWLLAF-------LTVILKTLGLSETVFEVTRKESSTS 486 R +W N M ++ W+ AF +T++ +TLG+ +TV +T + TS Sbjct: 340 RPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETLGIPDTVMGMTLLAAGTS 393
>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 507 Score = 31.2 bits (69), Expect = 3.1 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Frame = -1 Query: 653 EYKECGLSARAWWNNHRMQRITSASAWLLAFLTVILKTLGLSETVFEVTR--------KE 498 EYK+ GL AW N R R+ +++ L + L G++E F VT +E Sbjct: 366 EYKKAGLRMLAWTNPARNGRVALRYSFVFIPLCLSLCAAGVTEWSFAVTSFPINAWLIRE 425 Query: 497 SSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIG 348 S G + GLF + S V L++L+ + WR+V G Sbjct: 426 SVRFWRYEGNKGSARGLF-WASVWHLPGVMILALLHKKGMWTRVWRSVFG 474
>COX10_NEUCR (Q7S5E7) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 535 Score = 31.2 bits (69), Expect = 3.1 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = -1 Query: 680 LSYHIYHLMEYKECGLSARAWWNNHRMQRITSASAWLLAF--LTVILKTLGLSETVFEVT 507 LS+ I H EYK GL AW N R R+ A + LAF L V L G++E F VT Sbjct: 388 LSWGIRH--EYKAAGLRMLAWTNPARNGRV--ALRYSLAFIPLCVGLSATGVTEWSFAVT 443
>JHD3D_MOUSE (Q3U2K5) JmjC domain-containing histone demethylation protein 3D| (EC 1.14.11.-) (Jumonji domain-containing protein 2D) Length = 510 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -3 Query: 219 QGEGWFDCGCVRAPLHKELTGRAGHRNIGSVILVLPLEHVTKTQAGIKACY*RK 58 + +G G + KE R + NI ++++ PL+ V QAG+ Y +K Sbjct: 36 ESQGAHRAGLAKVIPPKEWRARQSYDNISNILIATPLQQVVSGQAGVFTQYHKK 89
>CBRB_DICD3 (Q47085) Achromobactin transport system permease protein cbrB| Length = 340 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 461 ADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTA 342 A PGLF ++ +F + +S+ VA++V W A G A Sbjct: 96 ASPGLFGINAGAMFFLIVCVSLFPKVAMSVWLWSAFAGAA 135
>DAF2_MOUSE (Q61476) Complement decay-accelerating factor transmembrane isoform| precursor (DAF-TM) (CD55 antigen) Length = 407 Score = 30.8 bits (68), Expect = 4.0 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 231 DSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDG 359 +S+ +P D+P+ ++P PAT HE T D+ + G Sbjct: 319 ESVPNPGDQPTPQKPSTVKVPATQHEPDTTTRTSTDKGESNSG 361
>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)| Length = 1186 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Frame = -2 Query: 316 SESSCAVAGWCCASGRS*EGLSA---GESMESRGASXXXXXXXXXRSCTSAQGTNRPGWP 146 ++SS AG + G S G S+ G S+ S G+S +++ G++ G+ Sbjct: 601 TDSSSKSAGSRTSGGSSTYGYSSSHRGGSVSSTGSSSNTDSSTKNAGSSTSGGSSTYGYS 660 Query: 145 SKYWKRNFSSTIGTCNEDSS 86 S + + SST + N DSS Sbjct: 661 SSHRGGSVSSTGSSSNTDSS 680
>CSTN3_MOUSE (Q99JH7) Calsyntenin-3 precursor| Length = 956 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = -1 Query: 614 NNHRMQRITSASAWLLAFLT---VILKTLGLSETVFEVTRKESSTSD-GGAGTDEADPGL 447 ++HR + SA+ ++ V++ LGL + + R+ S T GA TD DP L Sbjct: 837 SSHRNSMVPSAATLIIVVCVGFLVLMVILGLVR-IHSLHRRVSGTGGPSGASTDPKDPDL 895 Query: 446 FTFDSAPVFI 417 F DSA I Sbjct: 896 FWDDSALTII 905
>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)| (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX) Length = 365 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = +3 Query: 153 PGRLVPCAEVHERSHNQTSLHLDAP----RDSMLSPADKPSHERPEAQHHPATAHELSDA 320 PGR P A +RS + ++ D+P D SPA PS + TAH+L + Sbjct: 122 PGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPA--PSKRKKRRHRTVFTAHQLEEL 179 Query: 321 RATMNDRRSPD 353 ++ PD Sbjct: 180 EKAFSEAHYPD 190
>GNAS_HOMAM (O16118) Guanine nucleotide-binding protein G(s), alpha subunit| (Adenylate cyclase-stimulating G alpha protein) Length = 379 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1 Query: 542 TLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIV 384 TLG+ ET F+V + D G DE + F+ I VTA S N+V Sbjct: 189 TLGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV 241
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic| kidney disease protein 1) Length = 4303 Score = 29.6 bits (65), Expect = 9.0 Identities = 24/71 (33%), Positives = 28/71 (39%) Frame = -1 Query: 512 VTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTALSVLNIVALAVGAWRAVIGTAAVV 333 VT DG A D A P P VTA+ LA+GA A++GT V Sbjct: 300 VTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAV-------LALGAGSALLGTDVQV 352 Query: 332 HGGPGIGEFVC 300 P E VC Sbjct: 353 EAAPAALELVC 363
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.6 bits (65), Expect = 9.0 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +3 Query: 207 SLHLDAPRDSMLSPADKPSHER--------PEAQHHPATAHELSDARATMNDRR 344 SLHL +P S L+PA PS R EA P L A A M D R Sbjct: 297 SLHLQSPHSSPLAPAAAPSDPRLQDLKAREAEAWEEPTELLGLPSALAGMQDLR 350
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 29.6 bits (65), Expect = 9.0 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 584 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 405 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 710 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 752 Query: 404 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 276 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 753 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 795
>Y3480_MYCTU (O06343) Hypothetical UPF0089 protein Rv3480c/MT3584| Length = 497 Score = 29.6 bits (65), Expect = 9.0 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -3 Query: 681 LELPHIPLDGVQGVRALCPRLVEQPQDATHHLGLRLAPRLPHRDPQDTR 535 +++ H +DG G + L L P D TH L + P R P DT+ Sbjct: 139 IKMHHSLIDGYTGQKMLARSLSTDPHDTTHPLFFNIP--TPGRSPADTQ 185
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2| Length = 943 Score = 29.6 bits (65), Expect = 9.0 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +3 Query: 228 RDSMLSPADKPSHERPEAQHHPATAHELSDARATMNDRRSPDDGAPCPDGEGHNVQH*ER 407 R PA+KP P ++ P ++ A+A DRR+ DD + +G + Sbjct: 268 RQRPAKPAEKPQAAAPAVENKP-----VNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRD 322 Query: 408 RHRDENG 428 R+ NG Sbjct: 323 RNNARNG 329
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 29.6 bits (65), Expect = 9.0 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 584 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 405 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 672 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 714 Query: 404 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 276 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 715 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 757
>CAC1D_MESAU (Q99244) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide isoform 2) Length = 1610 Score = 29.6 bits (65), Expect = 9.0 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Frame = -1 Query: 584 ASAWLLAFLTVILKTLGLSETVFEVTRKESSTSDGGAGTDEADPGLFTFDSAPVFIPVTA 405 AS LL FL +I+ +L L +F G DE TFD+ P Sbjct: 650 ASLLLLLFLFIIIFSL-LGMQLF----------GGKFNFDETQTKRSTFDNFPQ------ 692 Query: 404 LSVLNIVALAVGA-WRAVIGTAAVVHGGPGIGEFVCCGWMVLCF 276 ++L + + G W AV+ + +GGP + C + ++ F Sbjct: 693 -ALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILF 735
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 29.6 bits (65), Expect = 9.0 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 222 APRDSMLSPADK-PSHERPEAQHHPATAHELSDARATMNDRRSPDD 356 AP+ +LSP+ PSH RP A P+T + AT + +R +D Sbjct: 115 APQHLLLSPSRAGPSHPRPTAVPGPSTRQNQAQWEATRHQQRLHND 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,042,698 Number of Sequences: 219361 Number of extensions: 1867295 Number of successful extensions: 6120 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6102 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
