ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111313.1| Zea mays CL35554_1 mRNA sequence 72 3e-09
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
3dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
4dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
5gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp... 44 0.61
6gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, com... 44 0.61
7ref|XM_483057.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.4
8gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, c... 42 2.4
9gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, c... 42 2.4
10gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, comp... 42 2.4
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.4
12ref|XM_817439.1| Trypanosoma brucei TREU927 hypothetical protein... 42 2.4
13gb|AC127365.4| Mus musculus BAC clone RP23-8K10 from 3, complete... 42 2.4
14gb|AC107806.10| Mus musculus chromosome 3, clone RP23-55C1, comp... 42 2.4
15emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chro... 42 2.4
16emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 ... 42 2.4
17emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 42 2.4
18gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, comp... 42 2.4
19gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complet... 42 2.4
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
22gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome... 42 2.4
23gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 42 2.4
24gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cance... 42 2.4
25dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
26dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
27ref|XM_313095.2| Anopheles gambiae str. PEST ENSANGP00000012870 ... 42 2.4
28dbj|AK110869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
29dbj|AK103460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
30emb|AL591374.5| Zebrafish DNA sequence from clone BUSM1-204B6 in... 42 2.4
31emb|AL591462.5| Zebrafish DNA sequence from clone BUSM1-204D19 i... 42 2.4
32emb|BX293986.7| Mouse DNA sequence from clone RP24-492P10 on chr... 42 2.4
33emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 i... 42 2.4
34gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, comp... 40 9.6
35gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 9.6
36gb|AC123599.6| Mus musculus chromosome 5, clone RP23-231D13, com... 40 9.6
37gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
38gb|AC130481.11| Mus musculus chromosome 1, clone RP24-125E22, co... 40 9.6
39ref|XM_458866.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.6
40gb|AC161236.6| Mus musculus chromosome 3, clone RP23-403O4, comp... 40 9.6
41gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complet... 40 9.6
42gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome... 40 9.6
43gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, com... 40 9.6
44gb|AC116588.3| Mus musculus BAC clone RP23-448E6 from 9, complet... 40 9.6
45emb|CR293531.11| Zebrafish DNA sequence from clone DKEY-125H23 i... 40 9.6
46gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
47gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete se... 40 9.6
48emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chr... 40 9.6
49gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 9.6
50emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chr... 40 9.6
51emb|AL136992.22| Human DNA sequence from clone RP11-400P21 on ch... 40 9.6
52gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
53emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 9.6
54emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 9.6
55gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, compl... 40 9.6
56gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Ro... 40 9.6
57gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, compl... 40 9.6
58emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 ... 40 9.6
59emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 i... 40 9.6
60gb|AC092305.2| Homo sapiens chromosome 19 clone LLNLR-229B1, com... 40 9.6
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
63dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
64dbj|AB210654.1| Ciona intestinalis mRNA for transcription factor... 40 9.6
65gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, compl... 40 9.6
66gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, com... 40 9.6
67gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complet... 40 9.6
68gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, comple... 40 9.6
69gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cance... 40 9.6
70dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.6
71dbj|AK174917.1| Ciona intestinalis cDNA, clone:citb045l01, full ... 40 9.6
72gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 9.6
73gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, com... 40 9.6
74gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome... 40 9.6
75dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.6
76gb|AC114602.16| Mus musculus chromosome 8, clone RP23-339B16, co... 40 9.6
77dbj|AP003110.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.6
78gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
79gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
80gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
81emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.6
82emb|BX005364.9| Zebrafish DNA sequence from clone DKEY-222L20, c... 40 9.6 
>gb|AY111313.1| Zea mays CL35554_1 mRNA sequence
          Length = 608

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 369 gttcttggcagaggaatctgctgctgaagatggagaatccctcctctcatggttgttctt 428
           ||||||||||||| ||||||||||||||||||||||||  | | |||||||| |||||||
Sbjct: 307 gttcttggcagagaaatctgctgctgaagatggagaatttcccttctcatggctgttctt 366
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 92/111 (82%)
 Strand = Plus / Minus

                                                                            
Query: 369      gttcttggcagaggaatctgctgctgaagatggagaatccctcctctcatggttgttctt 428
                ||||||||||| ||| |||||||   | ||||||||||| |||||||||||| |||||||
Sbjct: 18066129 gttcttggcagcggagtctgctgtcaaggatggagaatcactcctctcatggctgttctt 18066070

                                                                   
Query: 429      ctctcggagaaaattcacagggttcgcatacgaacttgtgcatggccacct 479
                 ||||| | |||||| || ||||  ||| | || ||||| |||||||||||
Sbjct: 18066069 atctcgaaaaaaatttactgggtctgcaaatgatcttgtacatggccacct 18066019



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 545      ccttattagagaagtatttggccttgatgcgtgctgcaagttcagcttggtatctgttta 604
                ||||||||||||||||||||||||| |  || |||||||||  |||||| ||| ||||||
Sbjct: 18058799 ccttattagagaagtatttggccttcaaacgggctgcaagtatagcttgatatttgttta 18058740

                          
Query: 605      ccttctgttc 614
                 |||||||||
Sbjct: 18058739 tcttctgttc 18058730
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>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0026C08
          Length = 155316

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 92/111 (82%)
 Strand = Plus / Minus

                                                                         
Query: 369   gttcttggcagaggaatctgctgctgaagatggagaatccctcctctcatggttgttctt 428
             ||||||||||| ||| |||||||   | ||||||||||| |||||||||||| |||||||
Sbjct: 59251 gttcttggcagcggagtctgctgtcaaggatggagaatcactcctctcatggctgttctt 59192

                                                                
Query: 429   ctctcggagaaaattcacagggttcgcatacgaacttgtgcatggccacct 479
              ||||| | |||||| || ||||  ||| | || ||||| |||||||||||
Sbjct: 59191 atctcgaaaaaaatttactgggtctgcaaatgatcttgtacatggccacct 59141



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 545   ccttattagagaagtatttggccttgatgcgtgctgcaagttcagcttggtatctgttta 604
             ||||||||||||||||||||||||| |  || |||||||||  |||||| ||| ||||||
Sbjct: 51921 ccttattagagaagtatttggccttcaaacgggctgcaagtatagcttgatatttgttta 51862

                       
Query: 605   ccttctgttc 614
              |||||||||
Sbjct: 51861 tcttctgttc 51852
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>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1509_C06
          Length = 113436

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 545    ccttattagagaagtatttggccttgatgcgtgctgcaagttcagcttggtatctgttta 604
              ||||||||||||||||||||||||| |  || |||||||||  |||||| ||| ||||||
Sbjct: 110453 ccttattagagaagtatttggccttcaaacgggctgcaagtatagcttgatatttgttta 110394

                        
Query: 605    ccttctgttc 614
               |||||||||
Sbjct: 110393 tcttctgttc 110384
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>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence
          Length = 175313

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 292  ggtgttagattgttttctgttg 313
            ||||||||||||||||||||||
Sbjct: 3471 ggtgttagattgttttctgttg 3450
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>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence
          Length = 205237

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 292   ggtgttagattgttttctgttg 313
             ||||||||||||||||||||||
Sbjct: 85262 ggtgttagattgttttctgttg 85241
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>ref|XM_483057.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 556 aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
           |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 265 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 206

                
Query: 616 tgctc 620
           |||||
Sbjct: 205 tgctc 201
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>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence
          Length = 168677

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     aaattattttaaagaaaaaga 55
              |||||||||||||||||||||
Sbjct: 127471 aaattattttaaagaaaaaga 127451
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>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence
          Length = 173430

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     aaattattttaaagaaaaaga 55
              |||||||||||||||||||||
Sbjct: 149020 aaattattttaaagaaaaaga 149040
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>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence
          Length = 249789

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 167    ggacggatttttatttcatga 187
              |||||||||||||||||||||
Sbjct: 120871 ggacggatttttatttcatga 120851
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 19       acaaacatgcaaggtcaaatt 39
                |||||||||||||||||||||
Sbjct: 27509448 acaaacatgcaaggtcaaatt 27509468
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>ref|XM_817439.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.4860)
            partial mRNA
          Length = 3207

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 421  ttgttcttctctcggagaaaattca 445
            ||||||| |||||||||||||||||
Sbjct: 1022 ttgttctcctctcggagaaaattca 998
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>gb|AC127365.4| Mus musculus BAC clone RP23-8K10 from 3, complete sequence
          Length = 191217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     ttattttaaagaaaaagataa 58
              |||||||||||||||||||||
Sbjct: 139063 ttattttaaagaaaaagataa 139083
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>gb|AC107806.10| Mus musculus chromosome 3, clone RP23-55C1, complete sequence
          Length = 214411

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     ttattttaaagaaaaagataa 58
              |||||||||||||||||||||
Sbjct: 138957 ttattttaaagaaaaagataa 138937
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>emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chromosome 10 Contains the
             5' end of the MYO3A gene for myosin IIIA, a novel gene and
             a CpG island, complete sequence
          Length = 174021

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 512   ttacttcttcaaagatttttc 532
             |||||||||||||||||||||
Sbjct: 79425 ttacttcttcaaagatttttc 79445
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>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6,
             complete sequence
          Length = 162560

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   ataacttgcatacttcaggtt 207
             |||||||||||||||||||||
Sbjct: 30906 ataacttgcatacttcaggtt 30886
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     tcaaattattttaaagaaaaa 53
              |||||||||||||||||||||
Sbjct: 116823 tcaaattattttaaagaaaaa 116803
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>gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, complete sequence
          Length = 206022

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   ggacggatttttatttcatga 187
             |||||||||||||||||||||
Sbjct: 49223 ggacggatttttatttcatga 49243
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>gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complete sequence
          Length = 178524

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    aaattattttaaagaaaaaga 55
             |||||||||||||||||||||
Sbjct: 54021 aaattattttaaagaaaaaga 54001
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 556      aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
                |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 24073841 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 24073782

                     
Query: 616      tgctc 620
                |||||
Sbjct: 24073781 tgctc 24073777
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 19       acaaacatgcaaggtcaaatt 39
                |||||||||||||||||||||
Sbjct: 27600771 acaaacatgcaaggtcaaatt 27600791
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>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence
          Length = 167631

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 343    gcttcagctaccacagatgaa 363
              |||||||||||||||||||||
Sbjct: 106229 gcttcagctaccacagatgaa 106249
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
             sequence
          Length = 123406

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    acaaacatgcaaggtcaaatt 39
             |||||||||||||||||||||
Sbjct: 41066 acaaacatgcaaggtcaaatt 41046
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>gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82165

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    aattattttaaagaaaaagat 56
             |||||||||||||||||||||
Sbjct: 73806 aattattttaaagaaaaagat 73786
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>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0481F05
          Length = 139739

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 556    aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
              |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 101241 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 101182

                   
Query: 616    tgctc 620
              |||||
Sbjct: 101181 tgctc 101177
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 556   aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
             |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 27327 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 27268

                  
Query: 616   tgctc 620
             |||||
Sbjct: 27267 tgctc 27263
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>ref|XM_313095.2| Anopheles gambiae str. PEST ENSANGP00000012870
           (ENSANGG00000010381), partial mRNA
          Length = 1767

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 198 acttcaggttgttgcacgtcttcag 222
           |||||||||| ||||||||||||||
Sbjct: 811 acttcaggttcttgcacgtcttcag 787
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>dbj|AK110869.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-E04, full
           insert sequence
          Length = 2144

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 556 aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
           |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 318 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 259

                
Query: 616 tgctc 620
           |||||
Sbjct: 258 tgctc 254
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>dbj|AK103460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129L23, full
           insert sequence
          Length = 780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 556 aagtatttggccttgatgcgtgctgcaagttcagcttggtatctgtttaccttctgttca 615
           |||||||||||||| |  || ||||||||  |||| || ||| |||| ||||||| ||||
Sbjct: 265 aagtatttggccttcaaacgagctgcaaggacagcctgatatttgttgaccttctcttca 206

                
Query: 616 tgctc 620
           |||||
Sbjct: 205 tgctc 201
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>emb|AL591374.5| Zebrafish DNA sequence from clone BUSM1-204B6 in linkage group 6,
             complete sequence
          Length = 102137

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   ataacttgcatacttcaggtt 207
             |||||||||||||||||||||
Sbjct: 46935 ataacttgcatacttcaggtt 46915
to top
>emb|AL591462.5| Zebrafish DNA sequence from clone BUSM1-204D19 in linkage group 6,
             complete sequence
          Length = 77242

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   ataacttgcatacttcaggtt 207
             |||||||||||||||||||||
Sbjct: 51645 ataacttgcatacttcaggtt 51665
to top
>emb|BX293986.7| Mouse DNA sequence from clone RP24-492P10 on chromosome X, complete
              sequence
          Length = 114458

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    acttgcatacttcaggttgtt 210
              |||||||||||||||||||||
Sbjct: 108622 acttgcatacttcaggttgtt 108642
to top
>emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 in linkage group 6,
              complete sequence
          Length = 147484

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 187    ataacttgcatacttcaggtt 207
              |||||||||||||||||||||
Sbjct: 132193 ataacttgcatacttcaggtt 132213
to top
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence
          Length = 181468

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aattattttaaagaaaaaga 55
             ||||||||||||||||||||
Sbjct: 96662 aattattttaaagaaaaaga 96681
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    atctgctgctgaagatggag 403
              ||||||||||||||||||||
Sbjct: 749472 atctgctgctgaagatggag 749491
to top
>gb|AC123599.6| Mus musculus chromosome 5, clone RP23-231D13, complete sequence
          Length = 191607

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ttattttaaagaaaaagata 57
             ||||||||||||||||||||
Sbjct: 72856 ttattttaaagaaaaagata 72875
to top
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0092N12, complete sequence
          Length = 109198

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttttaaagaaaaagataagt 60
             ||||||||||||||||||||
Sbjct: 16225 ttttaaagaaaaagataagt 16244
to top
>gb|AC130481.11| Mus musculus chromosome 1, clone RP24-125E22, complete sequence
          Length = 159436

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    catgcaaggtcaaattattt 43
             ||||||||||||||||||||
Sbjct: 26472 catgcaaggtcaaattattt 26453
to top
>ref|XM_458866.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D10175g)
           partial mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ttagattgttttctgttgcc 315
           ||||||||||||||||||||
Sbjct: 409 ttagattgttttctgttgcc 390
to top
>gb|AC161236.6| Mus musculus chromosome 3, clone RP23-403O4, complete sequence
          Length = 206652

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   tcaacaatagttacttcttc 521
             ||||||||||||||||||||
Sbjct: 73528 tcaacaatagttacttcttc 73547
to top
>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence
          Length = 171816

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 35   aaattattttaaagaaaaagataa 58
            |||||||| |||||||||||||||
Sbjct: 2523 aaattattctaaagaaaaagataa 2500
to top
>gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome 10, complete
            sequence
          Length = 215437

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   aattattttaaagaaaaaga 55
            ||||||||||||||||||||
Sbjct: 4918 aattattttaaagaaaaaga 4937
to top
>gb|AC103630.10| Mus musculus chromosome 6, clone RP24-358D8, complete sequence
          Length = 184937

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     tcaaattattttaaagaaaa 52
              ||||||||||||||||||||
Sbjct: 143672 tcaaattattttaaagaaaa 143691
to top
>gb|AC116588.3| Mus musculus BAC clone RP23-448E6 from 9, complete sequence
          Length = 189927

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aattattttaaagaaaaaga 55
             ||||||||||||||||||||
Sbjct: 80639 aattattttaaagaaaaaga 80620
to top
>emb|CR293531.11| Zebrafish DNA sequence from clone DKEY-125H23 in linkage group 21,
             complete sequence
          Length = 116173

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 594   gtatctgtttaccttctgttcatg 617
             |||||| |||||||||||||||||
Sbjct: 79772 gtatctatttaccttctgttcatg 79795
to top
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    cctacaaacatgcaaggtcaaatt 39
             |||||||||||||||| |||||||
Sbjct: 68415 cctacaaacatgcaagctcaaatt 68438
to top
>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence
          Length = 124526

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     ttattttaaagaaaaagataagtt 61
              ||||||| ||||||||||||||||
Sbjct: 114840 ttatttttaagaaaaagataagtt 114863
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>emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chromosome 1 Contains a
              processed pseudogene similar to heterogeneous nuclear
              ribonucleoprotein A1 (HNRPA1), complete sequence
          Length = 142390

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caaattattttaaagaaaaa 53
              ||||||||||||||||||||
Sbjct: 104618 caaattattttaaagaaaaa 104637
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 664     tcggacttgacggtgagcat 683
               ||||||||||||||||||||
Sbjct: 4694557 tcggacttgacggtgagcat 4694576
to top
>emb|AL157713.10| Human DNA sequence from clone RP11-110J1 on chromosome 1q23.3-24.3
             Contains the ETV3 gene for ets variant gene 3, a
             cytochrome c somatic pseudogene (HCP2), a ets variant gene
             3 (ETV3) pseudogene, a keratin 8 (KRT8) pseudogene, a
             smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
             (SMU1) pseudogene, the 5' end of the ARHGEF11 gene for Rho
             guanine nucleotide exchange factor (GEF) 11 and two CPG
             islands, complete sequence
          Length = 167292

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   ttcttggcagaggaatctgc 389
             ||||||||||||||||||||
Sbjct: 69571 ttcttggcagaggaatctgc 69590
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>emb|AL136992.22| Human DNA sequence from clone RP11-400P21 on chromosome 20 Contains
            the SCYE1P gene for small inducible cytokine subfamily E
            member 1 (endothelial-monocyte activating) pseudogene,
            complete sequence
          Length = 163681

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   caaattattttaaagaaaaa 53
            ||||||||||||||||||||
Sbjct: 6400 caaattattttaaagaaaaa 6381
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ttttaaagaaaaagataagt 60
              ||||||||||||||||||||
Sbjct: 986329 ttttaaagaaaaagataagt 986310
to top
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ttagattgttttctgttgcc 315
              ||||||||||||||||||||
Sbjct: 979415 ttagattgttttctgttgcc 979434



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ttagattgttttctgttgcc 315
              ||||||||||||||||||||
Sbjct: 748641 ttagattgttttctgttgcc 748660
to top
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              2/17
          Length = 349287

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 664    tcggacttgacggtgagcat 683
              ||||||||||||||||||||
Sbjct: 118893 tcggacttgacggtgagcat 118874
to top
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence
          Length = 217409

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   tttttatttcatgataactt 193
             ||||||||||||||||||||
Sbjct: 75776 tttttatttcatgataactt 75795
to top
>gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 192690

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 546   cttattagagaagtatttggcctt 569
             |||||||||||||| |||||||||
Sbjct: 45223 cttattagagaagtctttggcctt 45246
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>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence
          Length = 161398

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tcaaattattttaaagaaaa 52
             ||||||||||||||||||||
Sbjct: 47704 tcaaattattttaaagaaaa 47685
to top
>emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 in linkage group 10,
             complete sequence
          Length = 163542

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aattattttaaagaaaaaga 55
             ||||||||||||||||||||
Sbjct: 87612 aattattttaaagaaaaaga 87631
to top
>emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 in linkage group 17,
             complete sequence
          Length = 153573

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aggtcaaattattttaaaga 49
             ||||||||||||||||||||
Sbjct: 87335 aggtcaaattattttaaaga 87316
to top
>gb|AC092305.2| Homo sapiens chromosome 19 clone LLNLR-229B1, complete sequence
          Length = 35935

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ttaaagaaaaagataagttg 62
             ||||||||||||||||||||
Sbjct: 13470 ttaaagaaaaagataagttg 13489
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       attattttaaagaaaaagat 56
                ||||||||||||||||||||
Sbjct: 15374438 attattttaaagaaaaagat 15374457
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 16       cctacaaacatgcaaggtcaaatt 39
                |||||||||||||||| |||||||
Sbjct: 22272883 cctacaaacatgcaagctcaaatt 22272860
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ttttaaagaaaaagataagt 60
              ||||||||||||||||||||
Sbjct: 986329 ttttaaagaaaaagataagt 986310
to top
>dbj|AB210654.1| Ciona intestinalis mRNA for transcription factor protein, complete
            cds, clone: cima809p12
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 45   aaagaaaaagataagttgcatgct 68
            ||||||||||| ||||||||||||
Sbjct: 2427 aaagaaaaagaaaagttgcatgct 2404
to top
>gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, complete sequence
          Length = 105940

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ttaaagaaaaagataagttg 62
             ||||||||||||||||||||
Sbjct: 38466 ttaaagaaaaagataagttg 38447
to top
>gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, complete sequence
          Length = 216977

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ttattttaaagaaaaagata 57
             ||||||||||||||||||||
Sbjct: 34939 ttattttaaagaaaaagata 34920
to top
>gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complete sequence
          Length = 124950

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    caaattattttaaagaaaaa 53
             ||||||||||||||||||||
Sbjct: 76775 caaattattttaaagaaaaa 76756
to top
>gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, complete sequence
          Length = 147131

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 507   aatagttacttcttcaaagatttttcct 534
             ||||||||||||| |||||||| |||||
Sbjct: 61994 aatagttacttctacaaagattcttcct 62021
to top
>gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 157653

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   cttgcatacttcaggttgtt 210
             ||||||||||||||||||||
Sbjct: 62141 cttgcatacttcaggttgtt 62160
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 382     gaatctgctgctgaagatggagaa 405
               |||||||| |||||||||||||||
Sbjct: 5408254 gaatctgccgctgaagatggagaa 5408231
to top
>dbj|AK174917.1| Ciona intestinalis cDNA, clone:citb045l01, full insert sequence
          Length = 2515

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 45   aaagaaaaagataagttgcatgct 68
            ||||||||||| ||||||||||||
Sbjct: 2238 aaagaaaaagaaaagttgcatgct 2215
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 490     atggtttctccttcaacaat 509
               ||||||||||||||||||||
Sbjct: 1961130 atggtttctccttcaacaat 1961149
to top
>gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, complete sequence
          Length = 165131

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     aaggtcaaattattttaaag 48
              ||||||||||||||||||||
Sbjct: 116095 aaggtcaaattattttaaag 116076
to top
>gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome 6, complete sequence
          Length = 270621

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tcaaattattttaaagaaaa 52
              ||||||||||||||||||||
Sbjct: 200640 tcaaattattttaaagaaaa 200621
to top
>dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-236L10, complete
              sequence
          Length = 167639

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    acttcttcaaagatttttcc 533
              ||||||||||||||||||||
Sbjct: 128273 acttcttcaaagatttttcc 128292
to top
>gb|AC114602.16| Mus musculus chromosome 8, clone RP23-339B16, complete sequence
          Length = 196024

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 35     aaattattttaaagaaaaagataa 58
              |||||||||| |||||||||||||
Sbjct: 117014 aaattatttttaagaaaaagataa 117037
to top
>dbj|AP003110.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-843A23, complete
             sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   gtgttagattgttttctgtt 312
             ||||||||||||||||||||
Sbjct: 96387 gtgttagattgttttctgtt 96406
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ttttaaagaaaaagataagt 60
              ||||||||||||||||||||
Sbjct: 986326 ttttaaagaaaaagataagt 986307
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 16       cctacaaacatgcaaggtcaaatt 39
                |||||||||||||||| |||||||
Sbjct: 22582794 cctacaaacatgcaagctcaaatt 22582771
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       attattttaaagaaaaagat 56
                ||||||||||||||||||||
Sbjct: 15328721 attattttaaagaaaaagat 15328740
to top
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151541

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     attattttaaagaaaaagat 56
              ||||||||||||||||||||
Sbjct: 149831 attattttaaagaaaaagat 149850
to top
>emb|BX005364.9| Zebrafish DNA sequence from clone DKEY-222L20, complete sequence
          Length = 156035

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   gtatctgtttaccttctgtt 613
             ||||||||||||||||||||
Sbjct: 83163 gtatctgtttaccttctgtt 83144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,509,112
Number of Sequences: 3902068
Number of extensions: 7509112
Number of successful extensions: 150275
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 149545
Number of HSP's gapped (non-prelim): 731
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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