>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)|
           (Protein BIPOSTO) (Auxin-responsive protein
           IAA21/IAA23/IAA25)
          Length = 1164

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 339 QNLPDQRQHQALSPRAQHP-RQRQCPQIQHLNQLVKRRHQVHPSC 470
           Q L  Q+Q Q LSP++Q P  Q Q  Q+Q L  L  + HQ   SC
Sbjct: 755 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTL-SQGHQFPSSC 798

>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP)
          Length = 1983

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 333 QYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVKRRHQVHP 464
           QYQ     +Q Q    + Q  +Q+Q  Q+Q L Q + + HQ  P
Sbjct: 165 QYQQQASSQQQQQQQQQQQQQQQQQQQQVQQLRQQLYQSHQPLP 208

>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 549

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 315 GRCPRRQYQNLPDQRQHQALSPRAQHP-RQRQCPQIQH 425
           G   ++Q Q  P Q+Q Q+ SP  Q P +Q+Q P  QH
Sbjct: 444 GSSSQQQQQPPPQQQQQQSTSPPQQQPQQQQQQPNPQH 481

>LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp|
          Length = 657

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +3

Query: 246 YHSYEICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQH 425
           Y S ++     SQ +P  S +        Q Q    Q QHQ      QH +Q Q  Q QH
Sbjct: 149 YFSEQLAAEQFSQYAPTASPIPPAATTLHQQQQ---QLQHQQQQQYQQHQQQLQQQQHQH 205

Query: 426 LNQLVKRRHQVHP 464
            + L +++  + P
Sbjct: 206 QHYLQQQQQTLPP 218

>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 20/78 (25%), Positives = 39/78 (50%)
 Frame = +1

Query: 193 LYIKLCRRLVRLGNSGAATTLTRYAQVPCHSPPHELPSFTKAAAHGANTRTYQTSASTKP 372
           L + L   LV +G+S  A++ T  +     SPP  + S +  ++  A+T T  +  ++ P
Sbjct: 5   LLLSLSLLLVTVGSSSQASSTTSSSGGT--SPPTTVQSQSPGSSSQASTTTSSSGGASPP 62

Query: 373 *AHEPNTPGNASAHKSNT 426
              +  +PG++S   + T
Sbjct: 63  TTVQSQSPGSSSQASTTT 80

>MAML3_HUMAN (Q96JK9) Mastermind-like protein 3 (Mam-3)|
          Length = 1133

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 279 SQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQ 434
           S  SP   QL Q    ++Q   L  Q+Q Q    + Q  +Q+Q  Q QH NQ
Sbjct: 460 SDMSP-AEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQ 510

>VEIN_DROME (Q94918) Protein vein precursor (Epidermal growth factor-like|
           protein) (Protein defective dorsal discs)
          Length = 623

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
 Frame = +3

Query: 252 SYEICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQ-------HPRQRQC 410
           SYE+  S L   SP      Q    RR   N    RQ Q    R Q       H RQRQ 
Sbjct: 225 SYEMPESMLEDRSP-----EQAARSRRDGSNTNGSRQQQRTGHRQQLQQDKRDHRRQRQD 279

Query: 411 PQIQHLNQLVKRRHQ 455
            Q +   Q  +R+H+
Sbjct: 280 QQKEQRQQQQQRQHK 294

>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)|
           (3-dehydrosphinganine reductase) (KDS reductase)
          Length = 969

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +3

Query: 267 PSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQALSPRAQHPRQRQCPQIQHLNQLVK- 443
           P  + Q SP      Q     +Q+Q+   Q QH     + QH +Q+Q  Q Q    +++ 
Sbjct: 635 PGGVPQPSP------QDHSQHQQHQHQQQQHQHHQQQQQQQHQQQQQHQQQQQQADMLQG 688

Query: 444 -RRHQVHP 464
             + Q HP
Sbjct: 689 LGQPQAHP 696

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
 Frame = +3

Query: 258 EICPSALSQSSP*TSQLYQGRCPRRQYQNLPDQRQHQAL-----SPRA-QHPRQRQCPQI 419
           E  PS      P   Q  Q   P +Q Q  P  +Q Q       +P+A Q P+ +Q PQ+
Sbjct: 661 EPTPSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQV 720

Query: 420 QHLNQLVKRRHQVHP 464
           Q   Q  + +    P
Sbjct: 721 QQAQQAPQAQQAQQP 735

>SN_MOUSE (Q62230) Sialoadhesin precursor (Sialic acid-binding Ig-like|
           lectin-1) (Siglec-1) (Sheep erythrocyte receptor) (SER)
           (CD169 antigen)
          Length = 1694

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +1

Query: 124 QHTGMQTVSNSQLTESKDDTLLSLYIKLCRRLVRLGNSGAATTLTRYAQVPCHSPPHELP 303
           Q T +   SNS   E +   L    + LC     LGNS AA +    A V   +P + L 
Sbjct: 657 QRTKVSRTSNSLHVEIQKPVLEDEGVYLCEASNTLGNSSAAASFNAKATVLVITPSNTLR 716

Query: 304 SFTKA 318
             T+A
Sbjct: 717 EGTEA 721


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,421,162
Number of Sequences: 219361
Number of extensions: 1288452
Number of successful extensions: 4292
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)