| Clone Name | rbaal1c03 |
|---|---|
| Clone Library Name | barley_pub |
>KNAT3_ARATH (P48000) Homeobox protein knotted-1-like 3 (KNAT3)| Length = 431 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = +2 Query: 188 SSSSTATNSRPTASASSKWLARSLLCFCMQFLEQRQQIALGELGDAVDVRDDLLGGVE 361 +SSS + +S A+A+++WL+RS FL++ +GD + DD+ GG + Sbjct: 75 ASSSDSPSSAAAAAAANQWLSRS-----SSFLQRNNNNNASIVGDGI---DDVTGGAD 124
>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1268 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +3 Query: 243 GWLDHCSVFVCSFWSSGSKSRLANSAMRSTSG 338 GW DHC ++ C +SS L R SG Sbjct: 944 GWGDHCEIYPCPVYSSAEFHSLVPDGKRLHSG 975
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 373 RFAALDAAKEVIPDVDRIAEFAK 305 RFAA AAK V+PD +++ +F + Sbjct: 201 RFAAHPAAKRVLPDTEKVVQFTR 223
>MRAW_WOLTR (Q5GTH5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 333 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%) Frame = -2 Query: 154 IRLFRDCTINY---IRMYIDIF*SVHSLI----LLCM*SPSEISKMSYIXNGGVQ 11 I+ + D I Y ++++I+ F ++ S++ L + PS +SK+S I + G+Q Sbjct: 55 IKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQ 109
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +3 Query: 273 CSFWSSGSKSRLANSAMRSTSGMTSLAASSAAKRPR 380 CS W S SR A A R+T+ A+ S A RPR Sbjct: 107 CSCWRSPCGSRCAPPAPRATATSAVTASCSPAIRPR 142
>PURL_BARQU (Q6FZI9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 736 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/56 (21%), Positives = 26/56 (46%) Frame = +2 Query: 158 GTEGVLCILISSSSTATNSRPTASASSKWLARSLLCFCMQFLEQRQQIALGELGDA 325 G G + + + RPT ++ + LL C++ +E + +A+ ++G A Sbjct: 218 GVGGAMMASAEFNDSIDEKRPTVQVGDPFIEKCLLEACLELMELKAIVAIQDMGAA 273
>HBA_CATCL (P02017) Hemoglobin alpha subunit (Hemoglobin alpha chain)| (Alpha-globin) Length = 142 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +2 Query: 293 QQIALGELGDAVDVRDDLLGGV 358 +++ +G +GDAV DDLLGG+ Sbjct: 60 KKVIMGAIGDAVTKFDDLLGGL 81
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 207 PIRGLLLALAVNGWLDHCSVFVCSFWSSGSKSRLANSAMRST 332 P LL L + +LD+C +CSF K SAM +T Sbjct: 1493 PFEACLLHLKASSFLDNCVTDMCSFQGLQQKLCARMSAMTAT 1534
>MTMR2_MOUSE (Q9Z2D1) Myotubularin-related protein 2 (EC 3.1.3.-)| Length = 643 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Frame = -2 Query: 370 FAALDAAKEVIPDVD--RIAEFAKRDLLPLLQKLHTKTEQ*SSQPFTASASSRPRIGGGA 197 + AL IPD + R+A F R +P+L +H +++ T + S+P +G Sbjct: 240 YPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQA------TVTRCSQPMVGVSG 293 Query: 196 AA*NKDAQY 170 +D +Y Sbjct: 294 KRSKEDEKY 302
>FDHA_DESGI (Q934F5) Formate dehydrogenase alpha subunit precursor (EC 1.2.1.2)| (FDH alpha subunit) (Formate dehydrogenase large subunit) Length = 1012 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -2 Query: 373 RFAALDAAKEVIPDVDRIAEFAKRDLLPLLQKLHTKTEQ*SSQPFT 236 R+ + K IPD D I E AKR +QKL KT + P T Sbjct: 627 RYVGPEPRKNAIPDGDLIVELAKR-----VQKLLAKTPGKLAAPVT 667
>NOCP_AGRT5 (P35116) Nopaline permease ATP-binding protein P| Length = 257 Score = 27.3 bits (59), Expect = 9.1 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = +2 Query: 167 GVLCILISSSSTATNSRPTASASSKWLARSLLCFCMQFLE--QRQQIALGELGDAVDVRD 340 G L IL S TA + S +S CM FLE + +IA+G+ + V V+ Sbjct: 18 GTLEILKGISLTANKGDVVSIIGSSGSGKSTFLRCMNFLETPNKGRIAVGQ--EEVVVKT 75 Query: 341 DLLG---GVERGK 370 D G GV+R K Sbjct: 76 DAAGRLIGVDRKK 88
>SWI10_SCHPO (Q06182) Mating-type switching protein swi10| Length = 252 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%) Frame = +2 Query: 92 TLKYVYIHPYVVYSAISK--KSY 154 +LKY ++HP +YS ISK KSY Sbjct: 84 SLKYHHLHPEYIYSRISKLGKSY 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,244,731 Number of Sequences: 219361 Number of extensions: 822195 Number of successful extensions: 2290 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2290 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)