>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence
          Length = 180370

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   tcttcatcttttgtctccctt 325
             |||||||||||||||||||||
Sbjct: 19259 tcttcatcttttgtctccctt 19279

>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence
          Length = 170409

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   tcttcatcttttgtctccctt 325
             |||||||||||||||||||||
Sbjct: 13350 tcttcatcttttgtctccctt 13330

>gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete sequence
          Length = 110520

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 591   aactcaatactatcttctatgcatg 615
             ||||||||||||||||||| |||||
Sbjct: 65069 aactcaatactatcttctacgcatg 65093

>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence
          Length = 157530

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 579   tttctttcaaataactcaatactat 603
             ||||||||||||||||| |||||||
Sbjct: 33009 tttctttcaaataactctatactat 33033

>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence
          Length = 130466

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   tcttcatcttttgtctccctt 325
             |||||||||||||||||||||
Sbjct: 11764 tcttcatcttttgtctccctt 11744

>gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, complete sequence
          Length = 230772

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 32446 agagctctgcatcttcatct 32465

>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 637    agctgtcatatgtcaccatt 656
              ||||||||||||||||||||
Sbjct: 102112 agctgtcatatgtcaccatt 102131

>ref|XM_651227.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (14.t00019)
           partial mRNA
          Length = 1731

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 tccttctttttcaacaagta 404
           ||||||||||||||||||||
Sbjct: 753 tccttctttttcaacaagta 734

>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence
          Length = 195985

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    tgggacatggcagactcctt 435
              ||||||||||||||||||||
Sbjct: 113173 tgggacatggcagactcctt 113154

>emb|AL732423.12| Human DNA sequence from clone RP11-345L8 on chromosome X Contains the
             3' end of the SH3KBP1 gene for SH3-domain kinase binding
             protein 1 (CIN85) and the 5' end of the gene for a novel
             protein similar to mitogen-activated protein kinase kinase
             kinase 5 (MAP3K5), complete sequence
          Length = 173520

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ttgaaatgatttctgaatat 179
             ||||||||||||||||||||
Sbjct: 83495 ttgaaatgatttctgaatat 83476

>gb|AC139135.5| Mus musculus chromosome 9, clone RP24-360E17, complete sequence
          Length = 161297

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 85814 agagctctgcatcttcatct 85833

>gb|AC161606.5| Mus musculus BAC clone RP23-232M18 from chromosome 14, complete
             sequence
          Length = 223037

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 50854 agagctctgcatcttcatct 50835

>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence
          Length = 215236

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 68951 agagctctgcatcttcatct 68932

>gb|AC021192.7| Homo sapiens BAC clone RP11-767N15 from 4, complete sequence
          Length = 202563

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    acaggaacaaataaagttgg 155
              ||||||||||||||||||||
Sbjct: 119863 acaggaacaaataaagttgg 119844

>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 297    gctctgcatcttcatcttttgtct 320
              ||||||||||||| ||||||||||
Sbjct: 267774 gctctgcatcttcgtcttttgtct 267797

>gb|AF260927.1|AF260927 Mus musculus D4Cole1e (D4Cole1e) gene, partial cds; peroxiredoxin
             V-like pseudogene, complete sequence; retinoid binding
             protein 7 (Rbp7) gene, complete cds; and ubiquitin fusion
             degradation protein 2 (Ufd2) gene, partial cds
          Length = 90497

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 53119 agagctctgcatcttcatct 53138

>gb|AC126677.3| Mus musculus BAC clone RP24-156D14 from chromosome 9, complete sequence
          Length = 152468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    agagctctgcatcttcatct 313
              ||||||||||||||||||||
Sbjct: 115192 agagctctgcatcttcatct 115211

>dbj|BS000169.1| Pan troglodytes chromosome 22 clone:RP43-042E01, map 22, complete
             sequences
          Length = 228269

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   aaatgatttctgaatattgt 182
             ||||||||||||||||||||
Sbjct: 74448 aaatgatttctgaatattgt 74467

>gb|AF227510.1|AF227510 Homo sapiens chromosome 21 map 21q22.1 clone PAC B14273, complete
             sequence
          Length = 118018

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   aaatgatttctgaatattgt 182
             ||||||||||||||||||||
Sbjct: 77576 aaatgatttctgaatattgt 77595

>emb|AL163248.2|HS21C048 Homo sapiens chromosome 21 segment HS21C048
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aaatgatttctgaatattgt 182
              ||||||||||||||||||||
Sbjct: 225053 aaatgatttctgaatattgt 225072

>emb|BX649644.5| Zebrafish DNA sequence from clone CH211-215N5 in linkage group 18,
              complete sequence
          Length = 120810

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 297    gctctgcatcttcatcttttgtct 320
              ||||||||||||||| ||||||||
Sbjct: 104083 gctctgcatcttcattttttgtct 104106

>emb|Z75074.1|SCYOR166C S.cerevisiae chromosome XV reading frame ORF YOR166c
          Length = 1907

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ttgaaatgatttctgaatat 179
            ||||||||||||||||||||
Sbjct: 1335 ttgaaatgatttctgaatat 1316

>emb|AL929557.15| Mouse DNA sequence from clone RP23-29D15 on chromosome 2, complete
              sequence
          Length = 147454

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    agagctctgcatcttcatct 313
              ||||||||||||||||||||
Sbjct: 100675 agagctctgcatcttcatct 100656

>gb|AC114604.10| Mus musculus chromosome 9, clone RP23-367L9, complete sequence
          Length = 195888

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 69079 agagctctgcatcttcatct 69060

>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    agagctctgcatcttcatct 313
              ||||||||||||||||||||
Sbjct: 188918 agagctctgcatcttcatct 188899

>gb|AC154128.3| Tribolium castaneum  BAC T.cast_C36A24 (Clemson University Genomics
              Institute Tribolium castaneum BAC Library (Red Flour
              Beetle)) complete sequence
          Length = 154107

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 391    tttttcaacaagtaatgcatgcttttgg 418
              ||||| ||||||| ||||||||||||||
Sbjct: 153743 tttttgaacaagtgatgcatgcttttgg 153716

>gb|U55021.1|SCU55021 Saccharomyces cerevisiae cosmid pUOA1258 from chromosome 15R
          Length = 23931

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ttgaaatgatttctgaatat 179
             ||||||||||||||||||||
Sbjct: 11293 ttgaaatgatttctgaatat 11274

>dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081a,
             complete sequence
          Length = 60689

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   tctttctttcaaataactca 596
             ||||||||||||||||||||
Sbjct: 27633 tctttctttcaaataactca 27614

>emb|AL844574.8| Mouse DNA sequence from clone RP23-155G13 on chromosome 2, complete
             sequence
          Length = 72165

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 46485 agagctctgcatcttcatct 46466

>emb|AL591584.14| Mouse DNA sequence from clone RP23-335N12 on chromosome 2, complete
             sequence
          Length = 177754

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   agagctctgcatcttcatct 313
             ||||||||||||||||||||
Sbjct: 30625 agagctctgcatcttcatct 30644

>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete
             sequence
          Length = 176870

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   acaagtaatgcatgcttttg 417
             ||||||||||||||||||||
Sbjct: 33960 acaagtaatgcatgcttttg 33941

>emb|AL606973.29| Mouse DNA sequence from clone RP23-173D8 on chromosome 4, complete
              sequence
          Length = 243369

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    agagctctgcatcttcatct 313
              ||||||||||||||||||||
Sbjct: 186631 agagctctgcatcttcatct 186612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,623,380
Number of Sequences: 3902068
Number of extensions: 6623380
Number of successful extensions: 132857
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132792
Number of HSP's gapped (non-prelim): 65
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)