ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478736.1| Oryza sativa (japonica cultivar-group), mRNA 278 1e-71
2dbj|AK121056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 1e-71
3emb|X55967.1|ZMRPS11C Maize mRNA for cytoplasmic ribosomal prote... 252 8e-64
4gb|AY109839.1| Zea mays CL2091_1 mRNA sequence 238 1e-59
5gb|BT016344.1| Zea mays clone Contig177 mRNA sequence 226 4e-56
6ref|NM_186337.1| Oryza sativa (japonica cultivar-group), mRNA 194 2e-46
7ref|XM_473871.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
8ref|XM_473872.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
9ref|NM_114752.2| Arabidopsis thaliana EMB1080; structural consti... 167 3e-38
10gb|AY081614.1| Arabidopsis thaliana cytosolic ribosomal protein ... 167 3e-38
11gb|AY059947.1| Arabidopsis thaliana cytosolic ribosomal protein ... 167 3e-38
12emb|BX822120.1|CNS0A70U Arabidopsis thaliana Full-length cDNA Co... 167 3e-38
13emb|BX825783.1|CNS0A6DQ Arabidopsis thaliana Full-length cDNA Co... 167 3e-38
14gb|J05216.1|ATHRPS11A A.thaliana ribosomal protein S11 mRNA, 3' end 167 3e-38
15ref|NM_122279.2| Arabidopsis thaliana RPS11-BETA (RIBOSOMAL PROT... 161 2e-36
16gb|AY062955.1| Arabidopsis thaliana putative 40S ribosomal prote... 161 2e-36
17gb|AF360280.1| Arabidopsis thaliana putative 40S ribosomal prote... 161 2e-36
18gb|AY087240.1| Arabidopsis thaliana clone 33187 mRNA, complete s... 161 2e-36
19gb|AY088032.1| Arabidopsis thaliana clone 40559 mRNA, complete s... 159 8e-36
20dbj|AK120520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
21emb|BX830649.1|CNS0A1DA Arabidopsis thaliana Full-length cDNA Co... 153 5e-34
22gb|L07877.1|ATHRPS11B Arabidopsis thaliana ribosomal protein S11... 135 1e-28
23emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 125 1e-25
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
26dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
27dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
28ref|NM_119226.2| Arabidopsis thaliana structural constituent of ... 117 3e-23
29gb|BT014186.1| Lycopersicon esculentum clone 133363F, mRNA sequence 117 3e-23
30gb|AY091204.1| Arabidopsis thaliana putative ribosomal protein S... 117 3e-23
31gb|AY046037.1| Arabidopsis thaliana putative ribosomal protein S... 117 3e-23
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
33dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
34dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
35dbj|AK058705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
36emb|X66036.1|DTS11RP D.tertiolecta mRNA for S11 ribosomal protein 92 2e-15
37gb|AY438661.1| Quercus petraea ribosomal protein S11 gene, parti... 80 6e-12
38emb|AL132967.1|ATT2J13 Arabidopsis thaliana DNA chromosome 3, BA... 80 6e-12
39dbj|AB005244.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 80 6e-12
40gb|L28828.1|ATHMTRIPR Arabidopsis thaliana ribosomal protein S11... 80 6e-12
41emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 78 2e-11
42gb|AF227626.1|AF227626 Euphorbia esula 40S ribosomal protein S11... 68 2e-08
43gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete se... 64 4e-07
44gb|M31024.1|SOYRPS11A Soybean ribosomal protein S11 mRNA, 3' end 62 1e-06
45emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 60 6e-06
46emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BA... 60 6e-06
47emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, B... 60 6e-06
48emb|AJ005170.1|CPAJ5170 Cyanophora paradoxa partial mRNA for 40S... 54 4e-04
49ref|XM_473070.1| Oryza sativa (japonica cultivar-group), predic... 52 0.001
50gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete s... 48 0.022
51gb|DQ401082.1| Chlamydomonas sp. ICE-L 40S ribosomal protein S11... 48 0.022
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
53dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
54emb|Y08722.1|ATDDDRP Arabidopsis thaliana rpoPt gene 42 1.4
55emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.4
56emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 42 1.4
57gb|AC005967.3| Arabidopsis thaliana chromosome 2 clone F27D4 map... 42 1.4
58emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chro... 42 1.4
59gb|AC167168.5| Mus musculus chromosome 1, clone RP23-100P14, com... 40 5.4
60gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-... 40 5.4
61gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP... 40 5.4
62gb|BC056376.1| Mus musculus myotubularin related protein 1, mRNA... 40 5.4
63ref|XM_974257.1| PREDICTED: Mus musculus myotubularin related pr... 40 5.4
64gb|AF073997.1| Mus musculus myotubularin related protein 1 isofo... 40 5.4
65dbj|AK051390.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 5.4
66dbj|AK048714.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 5.4
67gb|BC057337.1| Mus musculus myotubularin related protein 1, mRNA... 40 5.4
68gb|AC135085.3| Mus musculus BAC clone RP24-317P24 from 1, comple... 40 5.4
69ref|NM_016985.2| Mus musculus myotubularin related protein 1 (Mt... 40 5.4
70dbj|AB012087.1| Cyprinus carpio mRNA for 40S ribosomal protein S... 40 5.4
71emb|AL772294.6| Mouse DNA sequence from clone RP23-125F4 on chro... 40 5.4 
>ref|XM_478736.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score =  278 bits (140), Expect = 1e-71
 Identities = 207/230 (90%)
 Strand = Plus / Minus

                                                                       
Query: 167 ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
           ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 449 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 390

                                                                       
Query: 227 ctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtga 286
           |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||
Sbjct: 389 ctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtga 330

                                                                       
Query: 287 gctgggatgttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtag 346
           || || |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 329 gccggaatgttggaatgcctcttctcatacctctgatatttcttcacaaagtggaggtag 270

                                                             
Query: 347 ttcctgcgcacgatgatcgtcctgttcatcttggcgctgtggcaggttcc 396
           |||||||| || ||||| |||||||||||||| || || ||||| |||||
Sbjct: 269 ttcctgcgaacaatgatagtcctgttcatcttagcactatggcatgttcc 220
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>dbj|AK121056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056G18, full
           insert sequence
          Length = 790

 Score =  278 bits (140), Expect = 1e-71
 Identities = 207/230 (90%)
 Strand = Plus / Minus

                                                                       
Query: 167 ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
           ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 576 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 517

                                                                       
Query: 227 ctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtga 286
           |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||
Sbjct: 516 ctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtga 457

                                                                       
Query: 287 gctgggatgttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtag 346
           || || |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 456 gccggaatgttggaatgcctcttctcatacctctgatatttcttcacaaagtggaggtag 397

                                                             
Query: 347 ttcctgcgcacgatgatcgtcctgttcatcttggcgctgtggcaggttcc 396
           |||||||| || ||||| |||||||||||||| || || ||||| |||||
Sbjct: 396 ttcctgcgaacaatgatagtcctgttcatcttagcactatggcatgttcc 347
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>emb|X55967.1|ZMRPS11C Maize mRNA for cytoplasmic ribosomal protein S11
          Length = 789

 Score =  252 bits (127), Expect = 8e-64
 Identities = 200/225 (88%)
 Strand = Plus / Minus

                                                                       
Query: 175 tccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactg 234
           ||||||||||| ||| || | ||||||||| ||||||||||| || ||||||||||||||
Sbjct: 511 tccagctggaatgactttgacgacattgaacctcacagtttttgataggggcctgcactg 452

                                                                       
Query: 235 gccaatgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggat 294
           |||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||| ||
Sbjct: 451 gccaatgatgacatggtcgccttccttcacacggaagcatggggagatgtgagctggaat 392

                                                                       
Query: 295 gttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcg 354
           ||||||||||||||| ||||||||||| || ||||| |||||||| || |||||||||||
Sbjct: 391 gttggagtgcctcttttcatacctctggtatttcttaacaaagtggagatagttcctgcg 332

                                                        
Query: 355 cacgatgatcgtcctgttcatcttggcgctgtggcaggttccagc 399
            || ||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 331 aacaatgatggttctgttcatcttagcactgtggcatgttccagc 287
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>gb|AY109839.1| Zea mays CL2091_1 mRNA sequence
          Length = 807

 Score =  238 bits (120), Expect = 1e-59
 Identities = 197/225 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 tccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactg 234
           ||||||||||| |||||| | ||||||||| |||||||     || ||||||||||||||
Sbjct: 524 tccagctggaatgaccttaacgacattgaacctcacagnnnnngataggggcctgcactg 465

                                                                       
Query: 235 gccaatgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggat 294
           |||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||| ||
Sbjct: 464 gccaatgatgacatggtcgccttccttcacacggaagcatggggagatgtgagctggaat 405

                                                                       
Query: 295 gttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcg 354
           ||||||||||||||| ||||||||||| || ||||| |||||||| ||||||||||||||
Sbjct: 404 gttggagtgcctcttttcatacctctggtatttcttaacaaagtggaggtagttcctgcg 345

                                                        
Query: 355 cacgatgatcgtcctgttcatcttggcgctgtggcaggttccagc 399
            || ||||| || |||||||| || || |||||||| ||||||||
Sbjct: 344 aacaatgatggttctgttcattttagcactgtggcatgttccagc 300
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>gb|BT016344.1| Zea mays clone Contig177 mRNA sequence
          Length = 777

 Score =  226 bits (114), Expect = 4e-56
 Identities = 181/204 (88%)
 Strand = Plus / Minus

                                                                       
Query: 196 gacattgaatctcacagttttcgacaggggcctgcactggccaatgatgacatggncgcc 255
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct: 504 gacattgaacctcacagtttttgacaggggcctgcactggccaatgatgacatggtcacc 445

                                                                       
Query: 256 ttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctcttctcata 315
           |||||| |||||| |||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 444 ttccttcacacggaagcatggagagatgtgagcaggaatgttggagtgcctcttctcata 385

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           |||||| || ||||| |||||||| ||||||||||||||  | ||||| || ||||||||
Sbjct: 384 cctctggtatttctttacaaagtggaggtagttcctgcgaccaatgatagttctgttcat 325

                                   
Query: 376 cttggcgctgtggcaggttccagc 399
           ||| || |||||||| || |||||
Sbjct: 324 cttagcactgtggcatgtcccagc 301
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>ref|NM_186337.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 513

 Score =  194 bits (98), Expect = 2e-46
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                       
Query: 167 ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
           ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 476 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 417

                                                                       
Query: 227 ctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtga 286
           |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||
Sbjct: 416 ctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtga 357

                                           
Query: 287 gctgggatgttggagtgcctcttctcatacct 318
           || || |||||||| |||||||||||||||||
Sbjct: 356 gccggaatgttggaatgcctcttctcatacct 325



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 300 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 241

                                   
Query: 376 cttggcgctgtggcaggttccagc 399
           |||||| |||||||| ||||||||
Sbjct: 240 cttggcactgtggcatgttccagc 217
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>ref|XM_473871.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score =  194 bits (98), Expect = 2e-46
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                       
Query: 167 ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
           ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 476 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 417

                                                                       
Query: 227 ctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtga 286
           |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||
Sbjct: 416 ctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtga 357

                                           
Query: 287 gctgggatgttggagtgcctcttctcatacct 318
           || || |||||||| |||||||||||||||||
Sbjct: 356 gccggaatgttggaatgcctcttctcatacct 325



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 300 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 241

                                   
Query: 376 cttggcgctgtggcaggttccagc 399
           |||||| |||||||| ||||||||
Sbjct: 240 cttggcactgtggcatgttccagc 217
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>ref|XM_473872.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 558

 Score =  194 bits (98), Expect = 2e-46
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                       
Query: 167 ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
           ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 521 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 462

                                                                       
Query: 227 ctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtga 286
           |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||
Sbjct: 461 ctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtga 402

                                           
Query: 287 gctgggatgttggagtgcctcttctcatacct 318
           || || |||||||| |||||||||||||||||
Sbjct: 401 gccggaatgttggaatgcctcttctcatacct 370



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 300 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 241

                                   
Query: 376 cttggcgctgtggcaggttccagc 399
           ||| || || ||||| ||||||||
Sbjct: 240 cttagcactatggcatgttccagc 217
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>ref|NM_114752.2| Arabidopsis thaliana EMB1080; structural constituent of ribosome
           AT3G48930 (EMB1080) mRNA, complete cds
          Length = 806

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 505 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 446

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 445 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 386

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 385 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 326

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 325 ctctgcattttcgcactgtggcaagtaccagcta 292
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>gb|AY081614.1| Arabidopsis thaliana cytosolic ribosomal protein S11 (At3g48930)
           mRNA, complete cds
          Length = 610

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 428 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 369

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 368 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 309

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 308 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 249

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 248 ctctgcattttcgcactgtggcaagtaccagcta 215
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>gb|AY059947.1| Arabidopsis thaliana cytosolic ribosomal protein S11 (At3g48930;
           T2J13.230) mRNA, complete cds
          Length = 690

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 507 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 448

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 447 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 388

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 387 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 328

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 327 ctctgcattttcgcactgtggcaagtaccagcta 294
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>emb|BX822120.1|CNS0A70U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 704

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 483 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 424

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 423 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 364

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 363 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 304

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 303 ctctgcattttcgcactgtggcaagtaccagcta 270
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>emb|BX825783.1|CNS0A6DQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 627

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 481 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 422

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 421 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 362

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 361 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 302

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 301 ctctgcattttcgcactgtggcaagtaccagcta 268
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>gb|J05216.1|ATHRPS11A A.thaliana ribosomal protein S11 mRNA, 3' end
          Length = 702

 Score =  167 bits (84), Expect = 3e-38
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 494 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 435

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 434 tggtctccttccttaacacggaagcatggtgagacatgagccggaatgtttgaatgcctc 375

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 374 ttctcatacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 315

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| || || |||||||| || |||||||
Sbjct: 314 ctctgcattttcgcactgtggcaagtaccagcta 281
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>ref|NM_122279.2| Arabidopsis thaliana RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA);
           structural constituent of ribosome AT5G23740
           (RPS11-BETA) mRNA, complete cds
          Length = 797

 Score =  161 bits (81), Expect = 2e-36
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||| |||||||| || || || |||||||  |||||||| ||||||
Sbjct: 543 gctggaatcaccttcagcacattgaacctaaccgtcttcgacaacggcctgcattggcca 484

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           |||||||||||| | ||||||||||||||| | || || ||||  || || |||||||||
Sbjct: 483 atgatgacatggtcaccttccttgacacggaaacacggtgagacatgggcagggatgttg 424

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           || || ||||||||||| |  |||||||||||||||||||||||||| ||||| || || 
Sbjct: 423 gaatgtctcttctcatatcgttgatacttcttcacaaagtgaaggtaattcctacgaaca 364

                                                      
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           ||||| || || | ||||||||| |||||||| || |||||||
Sbjct: 363 atgatggttctctgcatcttggcactgtggcaagtaccagcta 321
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>gb|AY062955.1| Arabidopsis thaliana putative 40S ribosomal protein S11 (At5g23740)
           mRNA, complete cds
          Length = 511

 Score =  161 bits (81), Expect = 2e-36
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||| |||||||| || || || |||||||  |||||||| ||||||
Sbjct: 437 gctggaatcaccttcagcacattgaacctaaccgtcttcgacaacggcctgcattggcca 378

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           |||||||||||| | ||||||||||||||| | || || ||||  || || |||||||||
Sbjct: 377 atgatgacatggtcaccttccttgacacggaaacacggtgagacatgggcagggatgttg 318

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           || || ||||||||||| |  |||||||||||||||||||||||||| ||||| || || 
Sbjct: 317 gaatgtctcttctcatatcgttgatacttcttcacaaagtgaaggtaattcctacgaaca 258

                                                      
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           ||||| || || | ||||||||| |||||||| || |||||||
Sbjct: 257 atgatggttctctgcatcttggcactgtggcaagtaccagcta 215
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>gb|AF360280.1| Arabidopsis thaliana putative 40S ribosomal protein S11 (At5g23740)
           mRNA, complete cds
          Length = 736

 Score =  161 bits (81), Expect = 2e-36
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||| |||||||| || || || |||||||  |||||||| ||||||
Sbjct: 541 gctggaatcaccttcagcacattgaacctaaccgtcttcgacaacggcctgcattggcca 482

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           |||||||||||| | ||||||||||||||| | || || ||||  || || |||||||||
Sbjct: 481 atgatgacatggtcaccttccttgacacggaaacacggtgagacatgggcagggatgttg 422

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           || || ||||||||||| |  |||||||||||||||||||||||||| ||||| || || 
Sbjct: 421 gaatgtctcttctcatatcgttgatacttcttcacaaagtgaaggtaattcctacgaaca 362

                                                      
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           ||||| || || | ||||||||| |||||||| || |||||||
Sbjct: 361 atgatggttctctgcatcttggcactgtggcaagtaccagcta 319
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>gb|AY087240.1| Arabidopsis thaliana clone 33187 mRNA, complete sequence
          Length = 716

 Score =  161 bits (81), Expect = 2e-36
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||| |||||||| || || || |||||||  |||||||| ||||||
Sbjct: 543 gctggaatcaccttcagcacattgaacctaaccgtcttcgacaacggcctgcattggcca 484

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           |||||||||||| | ||||||||||||||| | || || ||||  || || |||||||||
Sbjct: 483 atgatgacatggtcaccttccttgacacggaaacacggtgagacatgggcagggatgttg 424

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           || || ||||||||||| |  |||||||||||||||||||||||||| ||||| || || 
Sbjct: 423 gaatgtctcttctcatatcgttgatacttcttcacaaagtgaaggtaattcctacgaaca 364

                                                      
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           ||||| || || | ||||||||| |||||||| || |||||||
Sbjct: 363 atgatggttctctgcatcttggcactgtggcaagtaccagcta 321
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>gb|AY088032.1| Arabidopsis thaliana clone 40559 mRNA, complete sequence
          Length = 695

 Score =  159 bits (80), Expect = 8e-36
 Identities = 180/214 (84%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||  |||||||| ||||| || |||||||  |||||||| ||||||||||||| |
Sbjct: 511 accttcaacacattgaacctcactgtcttcgacaatggcctgcattggccaatgatgata 452

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | |||||||| |||||| |||| || ||||  ||||| || ||||| || ||||||
Sbjct: 451 tggtctccttccttaacacggaagcatggtgagacatgagcaggaatgttagaatgcctc 392

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           ||||| |||||||||||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 391 ttctcgtacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtc 332

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||| ||||| || ||||| || |||||||
Sbjct: 331 ctctgcattttggcactatggcaagtaccagcta 298
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>dbj|AK120520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124K01, full
           insert sequence
          Length = 822

 Score =  155 bits (78), Expect = 1e-34
 Identities = 184/220 (83%)
 Strand = Plus / Minus

                                                                       
Query: 182 ggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatg 241
           |||| ||||||||| |||||||| ||||| || || ||||| ||||||||||||||||||
Sbjct: 519 ggaatgaccttcagcacattgaacctcacggtctttgacagtggcctgcactggccaatg 460

                                                                       
Query: 242 atgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggag 301
           || || ||  | |||||||| |||||| |||| || || |||||||| || || ||||||
Sbjct: 459 atcacgtgatctccttccttaacacggaagcacggtgaaatgtgagcaggaatattggag 400

                                                                       
Query: 302 tgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatg 361
           ||||||||||| |||||||| |||||||| |||||||| || || ||||| || || || 
Sbjct: 399 tgcctcttctcgtacctctggtacttcttgacaaagtgcagataattcctccgaacaata 340

                                                   
Query: 362 atcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           || |||||||||||||| || || || || ||||||||||
Sbjct: 339 atggtcctgttcatcttagcactatgacatgttccagcta 300
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>emb|BX830649.1|CNS0A1DA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB9ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 648

 Score =  153 bits (77), Expect = 5e-34
 Identities = 186/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||| |||||||| ||  | || |||||||  |||||||| ||||||
Sbjct: 509 gctggaatcaccttcagcacattgaacctttccgtcttcgacaacggcctgcattggcca 450

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           |||||||||||| | ||||||||||||||| | || || ||||  || || |||||||||
Sbjct: 449 atgatgacatggtcaccttccttgacacggaaacacggtgagacatgggcagggatgttg 390

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           || || ||||||||||| |  |||||||||||||||||||||||||| ||||| || || 
Sbjct: 389 gaatgtctcttctcatatcgttgatacttcttcacaaagtgaaggtaattcctacgaaca 330

                                                      
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagcta 401
           ||||| || || | ||||||||| |||||||| || |||||||
Sbjct: 329 atgatggttctctgcatcttggcactgtggcaagtaccagcta 287
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>gb|L07877.1|ATHRPS11B Arabidopsis thaliana ribosomal protein S11 (RPS11-beta) mRNA,
           complete cds
          Length = 684

 Score =  135 bits (68), Expect = 1e-28
 Identities = 177/214 (82%)
 Strand = Plus / Minus

                                                                       
Query: 188 accttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgaca 247
           |||||||| |||||||| || || || |||||||  |||||||| |||||||||||||||
Sbjct: 501 accttcagcacattgaacctaaccgtcttcgacaacggcctgcattggccaatgatgaca 442

                                                                       
Query: 248 tggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctc 307
           ||| | ||||||||||||||| | || || ||||  || || ||||||| ||| || |||
Sbjct: 441 tggtcaccttccttgacacggaaacacggtgagacatgggcagggatgtgggaatgtctc 382

                                                                       
Query: 308 ttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtc 367
           |||||||| |   ||||||||||||||||||||||||| | ||| || || ||||| || 
Sbjct: 381 ttctcatatcggggatacttcttcacaaagtgaaggtaatccctacgaacaatgatggtt 322

                                             
Query: 368 ctgttcatcttggcgctgtggcaggttccagcta 401
           || | ||||||||| |||||||| || |||||||
Sbjct: 321 ctctgcatcttggcactgtggcaagtaccagcta 288
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                          
Query: 226    cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
              ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 123501 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 123442

                                               
Query: 286    agctgggatgttggagtgcctcttctcatacct 318
              ||| || |||||||| |||||||||||||||||
Sbjct: 123441 agccggaatgttggaatgcctcttctcatacct 123409



 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                          
Query: 226    cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
              ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 120890 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 120831

                                               
Query: 286    agctgggatgttggagtgcctcttctcatacct 318
              ||| || |||||||| |||||||||||||||||
Sbjct: 120830 agccggaatgttggaatgcctcttctcatacct 120798



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                          
Query: 316    cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
              ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 123339 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 123280

                                      
Query: 376    cttggcgctgtggcaggttccagc 399
              ||| || || ||||| ||||||||
Sbjct: 123279 cttagcactatggcatgttccagc 123256



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                          
Query: 316    cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
              ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 120715 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 120656

                                      
Query: 376    cttggcgctgtggcaggttccagc 399
              |||||| |||||||| ||||||||
Sbjct: 120655 cttggcactgtggcatgttccagc 120632



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                          
Query: 167    ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
              ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 123705 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 123646

                 
Query: 227    ctg 229
              |||
Sbjct: 123645 ctg 123643



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                          
Query: 167    ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
              ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 121094 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 121035

                 
Query: 227    ctg 229
              |||
Sbjct: 121034 ctg 121032
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                            
Query: 226      cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
                ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 31141420 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 31141361

                                                 
Query: 286      agctgggatgttggagtgcctcttctcatacct 318
                ||| || |||||||| |||||||||||||||||
Sbjct: 31141360 agccggaatgttggaatgcctcttctcatacct 31141328



 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                            
Query: 226      cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
                ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 31138809 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 31138750

                                                 
Query: 286      agctgggatgttggagtgcctcttctcatacct 318
                ||| || |||||||| |||||||||||||||||
Sbjct: 31138749 agccggaatgttggaatgcctcttctcatacct 31138717



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                            
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
                ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 31141258 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 31141199

                                        
Query: 376      cttggcgctgtggcaggttccagc 399
                ||| || || ||||| ||||||||
Sbjct: 31141198 cttagcactatggcatgttccagc 31141175



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
                ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 31138634 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 31138575

                                        
Query: 376      cttggcgctgtggcaggttccagc 399
                |||||| |||||||| ||||||||
Sbjct: 31138574 cttggcactgtggcatgttccagc 31138551



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 167      ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
                ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 31141624 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 31141565

                   
Query: 227      ctg 229
                |||
Sbjct: 31141564 ctg 31141562



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 167      ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
                ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 31139013 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 31138954

                   
Query: 227      ctg 229
                |||
Sbjct: 31138953 ctg 31138951



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                            
Query: 226      cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
                |||||||||||||||||| || ||  | |||||||| |||||| |||| || || |||||
Sbjct: 25052582 cctgcactggccaatgatcacgtgatctccttccttaacacggaagcacggtgaaatgtg 25052641

                                                 
Query: 286      agctgggatgttggagtgcctcttctcatacct 318
                ||| || || ||||||||||||||||| |||||
Sbjct: 25052642 agcaggaatattggagtgcctcttctcgtacct 25052674



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                            
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
                |||||| |||||||| |||||||| || || ||||| || || || || |||||||||||
Sbjct: 25052760 cctctggtacttcttgacaaagtgcagataattcctccgaacaataatggtcctgttcat 25052819

                                          
Query: 376      cttggcgctgtggcaggttccagcta 401
                ||| || || || || ||||||||||
Sbjct: 25052820 cttagcactatgacatgttccagcta 25052845
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                            
Query: 226      cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
                ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 22604109 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 22604168

                                                 
Query: 286      agctgggatgttggagtgcctcttctcatacct 318
                ||| || |||||||| |||||||||||||||||
Sbjct: 22604169 agccggaatgttggaatgcctcttctcatacct 22604201



 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                            
Query: 226      cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
                ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 22601506 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 22601565

                                                 
Query: 286      agctgggatgttggagtgcctcttctcatacct 318
                ||| || |||||||| |||||||||||||||||
Sbjct: 22601566 agccggaatgttggaatgcctcttctcatacct 22601598



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
                ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 22601657 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 22601716

                                     
Query: 376      cttggcgctgtggcaggttcc 396
                ||| || || ||||| |||||
Sbjct: 22601717 cttagcactatggcatgttcc 22601737



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
                ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 22604284 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 22604343

                                        
Query: 376      cttggcgctgtggcaggttccagc 399
                |||||| |||||||| ||||||||
Sbjct: 22604344 cttggcactgtggcatgttccagc 22604367



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 167      ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
                ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 22603905 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 22603964

                   
Query: 227      ctg 229
                |||
Sbjct: 22603965 ctg 22603967



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 167      ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
                ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 22601302 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 22601361

                   
Query: 227      ctg 229
                |||
Sbjct: 22601362 ctg 22601364
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 22007 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 22066

                                              
Query: 286   agctgggatgttggagtgcctcttctcatacct 318
             ||| || |||||||| |||||||||||||||||
Sbjct: 22067 agccggaatgttggaatgcctcttctcatacct 22099



 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 19404 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 19463

                                              
Query: 286   agctgggatgttggagtgcctcttctcatacct 318
             ||| || |||||||| |||||||||||||||||
Sbjct: 19464 agccggaatgttggaatgcctcttctcatacct 19496



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 316   cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
             ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 19555 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 19614

                                  
Query: 376   cttggcgctgtggcaggttcc 396
             ||| || || ||||| |||||
Sbjct: 19615 cttagcactatggcatgttcc 19635



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                         
Query: 316   cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
             ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 22182 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 22241

                                     
Query: 376   cttggcgctgtggcaggttccagc 399
             |||||| |||||||| ||||||||
Sbjct: 22242 cttggcactgtggcatgttccagc 22265



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 167   ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
             ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 21803 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 21862

                
Query: 227   ctg 229
             |||
Sbjct: 21863 ctg 21865



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 167   ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
             ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 19200 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 19259

                
Query: 227   ctg 229
             |||
Sbjct: 19260 ctg 19262
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>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 84491 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 84550

                                              
Query: 286   agctgggatgttggagtgcctcttctcatacct 318
             ||| || |||||||| |||||||||||||||||
Sbjct: 84551 agccggaatgttggaatgcctcttctcatacct 84583



 Score =  125 bits (63), Expect = 1e-25
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||
Sbjct: 81888 cctgcactggccaatgatgacatggtcaccttccttgacacggaagcatggggagacgtg 81947

                                              
Query: 286   agctgggatgttggagtgcctcttctcatacct 318
             ||| || |||||||| |||||||||||||||||
Sbjct: 81948 agccggaatgttggaatgcctcttctcatacct 81980



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 316   cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
             ||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 82039 cctctgatatttcttcacaaagtggaggtagttcctgcgaacaatgatagtcctgttcat 82098

                                  
Query: 376   cttggcgctgtggcaggttcc 396
             ||| || || ||||| |||||
Sbjct: 82099 cttagcactatggcatgttcc 82119



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                         
Query: 316   cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
             ||||||||| ||||| ||||| || |||||||||||||| || ||||| || ||||||||
Sbjct: 84666 cctctgatatttcttgacaaaatggaggtagttcctgcgaacaatgatagttctgttcat 84725

                                     
Query: 376   cttggcgctgtggcaggttccagc 399
             |||||| |||||||| ||||||||
Sbjct: 84726 cttggcactgtggcatgttccagc 84749



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 167   ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
             ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 84287 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 84346

                
Query: 227   ctg 229
             |||
Sbjct: 84347 ctg 84349



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 167   ccggtggttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggc 226
             ||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 81684 ccggtggatccagctgggatgaccttcaggacgttgaacctcacagttttcgacagcggc 81743

                
Query: 227   ctg 229
             |||
Sbjct: 81744 ctg 81746
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>ref|NM_119226.2| Arabidopsis thaliana structural constituent of ribosome AT4G30800
           mRNA, complete cds
          Length = 808

 Score =  117 bits (59), Expect = 3e-23
 Identities = 183/225 (81%)
 Strand = Plus / Minus

                                                                       
Query: 174 ttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcact 233
           ||||||| |||| |||||||||||||||||| ||||| || || ||||  |||||||| |
Sbjct: 491 ttccagccggaatgaccttcaggacattgaacctcaccgtctttgacaatggcctgcatt 432

                                                                       
Query: 234 ggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtgagctggga 293
           | |||||| | ||| |  | ||||| ||||||||| |||| ||||| |  ||||| || |
Sbjct: 431 gcccaatggtaacacgatctccttctttgacacggaagcacggggaaacatgagcaggaa 372

                                                                       
Query: 294 tgttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgc 353
           |||| ||||| || |||||||| ||  |||||||||||||||| ||||| |||| ||| |
Sbjct: 371 tgtttgagtgtcttttctcatatcttcgatacttcttcacaaaatgaagatagtccctac 312

                                                        
Query: 354 gcacgatgatcgtcctgttcatcttggcgctgtggcaggttccag 398
           | || ||||||||||| | |||||| || ||||| || |||||||
Sbjct: 311 gaacaatgatcgtcctctgcatctttgcactgtgacaagttccag 267
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>gb|BT014186.1| Lycopersicon esculentum clone 133363F, mRNA sequence
          Length = 726

 Score =  117 bits (59), Expect = 3e-23
 Identities = 180/221 (81%)
 Strand = Plus / Minus

                                                                       
Query: 179 gctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcca 238
           |||||||  |||||||  |||||||| ||||||||||| || |  |||||||||||||||
Sbjct: 517 gctggaatcaccttcaatacattgaacctcacagttttggataaaggcctgcactggcca 458

                                                                       
Query: 239 atgatgacatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttg 298
           ||  | |||||  | || || || |||||| |||| || || ||||||||||| || |||
Sbjct: 457 atagtaacatgatctccctctttcacacggaagcatggtgatatgtgagctggaatattg 398

                                                                       
Query: 299 gagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacg 358
           ||||| ||||||||||| |||||||||||||| ||| | || ||||| || |  || || 
Sbjct: 397 gagtgtctcttctcatatctctgatacttcttgacataatgtaggtaattgcgtcgaaca 338

                                                    
Query: 359 atgatcgtcctgttcatcttggcgctgtggcaggttccagc 399
           ||||| |||||||||||||| || |||||||| || |||||
Sbjct: 337 atgatggtcctgttcatcttagcactgtggcatgtgccagc 297
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>gb|AY091204.1| Arabidopsis thaliana putative ribosomal protein S11 (At4g30800)
           mRNA, complete cds
          Length = 511

 Score =  117 bits (59), Expect = 3e-23
 Identities = 183/225 (81%)
 Strand = Plus / Minus

                                                                       
Query: 174 ttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcact 233
           ||||||| |||| |||||||||||||||||| ||||| || || ||||  |||||||| |
Sbjct: 442 ttccagccggaatgaccttcaggacattgaacctcaccgtctttgacaatggcctgcatt 383

                                                                       
Query: 234 ggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtgagctggga 293
           | |||||| | ||| |  | ||||| ||||||||| |||| ||||| |  ||||| || |
Sbjct: 382 gcccaatggtaacacgatctccttctttgacacggaagcacggggaaacatgagcaggaa 323

                                                                       
Query: 294 tgttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgc 353
           |||| ||||| || |||||||| ||  |||||||||||||||| ||||| |||| ||| |
Sbjct: 322 tgtttgagtgtcttttctcatatcttcgatacttcttcacaaaatgaagatagtccctac 263

                                                        
Query: 354 gcacgatgatcgtcctgttcatcttggcgctgtggcaggttccag 398
           | || ||||||||||| | |||||| || ||||| || |||||||
Sbjct: 262 gaacaatgatcgtcctctgcatctttgcactgtgacaagttccag 218
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>gb|AY046037.1| Arabidopsis thaliana putative ribosomal protein S11 (At4g30800)
           mRNA, complete cds
          Length = 829

 Score =  117 bits (59), Expect = 3e-23
 Identities = 183/225 (81%)
 Strand = Plus / Minus

                                                                       
Query: 174 ttccagctggaacgaccttcaggacattgaatctcacagttttcgacaggggcctgcact 233
           ||||||| |||| |||||||||||||||||| ||||| || || ||||  |||||||| |
Sbjct: 491 ttccagccggaatgaccttcaggacattgaacctcaccgtctttgacaatggcctgcatt 432

                                                                       
Query: 234 ggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtgagctggga 293
           | |||||| | ||| |  | ||||| ||||||||| |||| ||||| |  ||||| || |
Sbjct: 431 gcccaatggtaacacgatctccttctttgacacggaagcacggggaaacatgagcaggaa 372

                                                                       
Query: 294 tgttggagtgcctcttctcatacctctgatacttcttcacaaagtgaaggtagttcctgc 353
           |||| ||||| || |||||||| ||  |||||||||||||||| ||||| |||| ||| |
Sbjct: 371 tgtttgagtgtcttttctcatatcttcgatacttcttcacaaaatgaagatagtccctac 312

                                                        
Query: 354 gcacgatgatcgtcctgttcatcttggcgctgtggcaggttccag 398
           | || ||||||||||| | |||||| || ||||| || |||||||
Sbjct: 311 gaacaatgatcgtcctctgcatctttgcactgtgacaagttccag 267
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  111 bits (56), Expect = 2e-21
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 226     cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
               ||||||||||||||||||||||||| | |||||||| |||||| |||| || || |||||
Sbjct: 6238692 cctgcactggccaatgatgacatggtcaccttccttaacacggaagcatggagaaatgtg 6238751

                                             
Query: 286     agctgggatgttggagtgcctcttctcata 315
               |||||| ||||||||||||||||| |||||
Sbjct: 6238752 agctggaatgttggagtgcctcttttcata 6238781



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                           
Query: 314     tacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttc 373
               |||| |||||| ||||||||||| || |||||||| ||||| |||||||| ||||| |||
Sbjct: 6238866 taccgctgatatttcttcacaaaatggaggtagtttctgcgtacgatgattgtcctattc 6238925

                                         
Query: 374     atcttggcgctgtggcaggttccagc 399
               |||||||| |||||||| ||||||||
Sbjct: 6238926 atcttggcactgtggcatgttccagc 6238951
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>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1734_E04
          Length = 101439

 Score =  111 bits (56), Expect = 2e-21
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             ||||||||||||||||||||||||| | |||||||| |||||| |||| || || |||||
Sbjct: 24829 cctgcactggccaatgatgacatggtcaccttccttaacacggaagcatggagaaatgtg 24888

                                           
Query: 286   agctgggatgttggagtgcctcttctcata 315
             |||||| ||||||||||||||||| |||||
Sbjct: 24889 agctggaatgttggagtgcctcttttcata 24918



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 314   tacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttc 373
             |||| |||||| ||||||||||| || |||||||| ||||| |||||||| ||||| |||
Sbjct: 25003 taccgctgatatttcttcacaaaatggaggtagtttctgcgtacgatgattgtcctattc 25062

                                       
Query: 374   atcttggcgctgtggcaggttccagc 399
             |||||||| |||||||| ||||||||
Sbjct: 25063 atcttggcactgtggcatgttccagc 25088
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_C05
          Length = 126112

 Score =  111 bits (56), Expect = 2e-21
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                          
Query: 226    cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
              ||||||||||||||||||||||||| | |||||||| |||||| |||| || || |||||
Sbjct: 102085 cctgcactggccaatgatgacatggtcaccttccttaacacggaagcatggagaaatgtg 102144

                                            
Query: 286    agctgggatgttggagtgcctcttctcata 315
              |||||| ||||||||||||||||| |||||
Sbjct: 102145 agctggaatgttggagtgcctcttttcata 102174



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                          
Query: 314    tacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttc 373
              |||| |||||| ||||||||||| || |||||||| ||||| |||||||| ||||| |||
Sbjct: 102259 taccgctgatatttcttcacaaaatggaggtagtttctgcgtacgatgattgtcctattc 102318

                                        
Query: 374    atcttggcgctgtggcaggttccagc 399
              |||||||| |||||||| ||||||||
Sbjct: 102319 atcttggcactgtggcatgttccagc 102344
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>dbj|AK058705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C09, full
           insert sequence
          Length = 365

 Score =  107 bits (54), Expect = 3e-20
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                       
Query: 200 ttgaatctcacagttttcgacaggggcctgcactggccaatgatgacatggncgccttcc 259
           ||||| ||||||||||| || |  ||||||||||||||||||||||||||| | ||||||
Sbjct: 104 ttgaacctcacagtttttgataaaggcctgcactggccaatgatgacatggtcaccttcc 45

                                                       
Query: 260 ttgacacggnagcagggggagatgtgagctgggatgttggagtg 303
           || |||||| |||| || || ||||||||||| |||||||||||
Sbjct: 44  ttaacacggaagcatggagaaatgtgagctggaatgttggagtg 1
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>emb|X66036.1|DTS11RP D.tertiolecta mRNA for S11 ribosomal protein
          Length = 692

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 218 gacaggggcctgcactggccaatgatgacatggncgccttccttgacacggnagcagggg 277
           ||||| |||||||||||||||||||||||   | | || ||| | |||||| |||| |||
Sbjct: 431 gacagaggcctgcactggccaatgatgacggtgtctccatcccttacacggaagcatggg 372

                                                   
Query: 278 gagatgtgagctgggatgttggagtgcctcttctcatacc 317
           |||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 371 gagacgtgtgctgggatgttggtgtgcctcttctcatacc 332
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>gb|AY438661.1| Quercus petraea ribosomal protein S11 gene, partial cds and 3' UTR
          Length = 572

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226 cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
           |||||||||||||||| |||| ||| | || || || |||||  |||| ||||| |||||
Sbjct: 230 cctgcactggccaatggtgacgtggtctccctctttcacacgaaagcatggggatatgtg 171

                                         
Query: 286 agctgggatgttggagtgcctcttctcata 315
            ||||||||||| |||||||||||||||||
Sbjct: 170 tgctgggatgtttgagtgcctcttctcata 141
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>emb|AL132967.1|ATT2J13 Arabidopsis thaliana DNA chromosome 3, BAC clone T2J13
          Length = 85109

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 314   tacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttc 373
             |||||||||||||||||||||||||||||||| | ||| |||||||| || ||||| | |
Sbjct: 78054 tacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtcctctgc 77995

                                         
Query: 374   atcttggcgctgtggcaggttccagcta 401
             || || || |||||||| || |||||||
Sbjct: 77994 attttcgcactgtggcaagtaccagcta 77967



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             |||||| ||||||||||||| |||| | |||||||| |||||| |||| || ||||  ||
Sbjct: 78224 cctgcattggccaatgatgatatggtctccttccttaacacggaagcatggtgagacatg 78165

                                              
Query: 286   agctgggatgttggagtgcctcttctcatacct 318
             ||| || ||||| || |||||||||||||||||
Sbjct: 78164 agccggaatgtttgaatgcctcttctcatacct 78132
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>dbj|AB005244.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRO11
          Length = 82415

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                        
Query: 226  cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
            |||||| |||||||||||||||||| | ||||||||||||||| | || || ||||  ||
Sbjct: 6111 cctgcattggccaatgatgacatggtcaccttccttgacacggaaacacggtgagacatg 6170

                                          
Query: 286  agctgggatgttggagtgcctcttctcata 315
             || ||||||||||| || |||||||||||
Sbjct: 6171 ggcagggatgttggaatgtctcttctcata 6200



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                        
Query: 320  tgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcatcttg 379
            |||||||||||||||||||||||||| ||||| || || ||||| || || | |||||||
Sbjct: 6298 tgatacttcttcacaaagtgaaggtaattcctacgaacaatgatggttctctgcatcttg 6357

                                  
Query: 380  gcgctgtggcaggttccagcta 401
            || |||||||| || |||||||
Sbjct: 6358 gcactgtggcaagtaccagcta 6379
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>gb|L28828.1|ATHMTRIPR Arabidopsis thaliana ribosomal protein S11 gene, complete cds
          Length = 2725

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 314  tacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttc 373
            |||||||||||||||||||||||||||||||| | ||| |||||||| || ||||| | |
Sbjct: 1963 tacctctgatacttcttcacaaagtgaaggtaatcccttcgcacgataatggtcctctgc 1904

                                        
Query: 374  atcttggcgctgtggcaggttccagcta 401
            || || || |||||||| || |||||||
Sbjct: 1903 attttcgcactgtggcaagtaccagcta 1876



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 226  cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
            |||||| ||||||||||||| |||| | |||||||| |||||| |||| || ||||  ||
Sbjct: 2133 cctgcattggccaatgatgatatggtctccttccttaacacggaagcatggtgagacatg 2074

                                             
Query: 286  agctgggatgttggagtgcctcttctcatacct 318
            ||| || ||||| || |||||||||||||||||
Sbjct: 2073 agccggaatgtttgaatgcctcttctcatacct 2041
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
           complete sequence
          Length = 150187

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                       
Query: 226 cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
           |||||||||||||||||| || ||  | |||||||| |||||| |||| || || |||||
Sbjct: 9   cctgcactggccaatgatcacgtgatctccttccttaacacggaagcacggtgaaatgtg 68

                                            
Query: 286 agctgggatgttggagtgcctcttctcatacct 318
           ||| || || ||||||||||||||||| |||||
Sbjct: 69  agcaggaatattggagtgcctcttctcgtacct 101



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           |||||| |||||||| |||||||| || || ||||| || || || || |||||||||||
Sbjct: 187 cctctggtacttcttgacaaagtgcagataattcctccgaacaataatggtcctgttcat 246

                                     
Query: 376 cttggcgctgtggcaggttccagcta 401
           ||| || || || || ||||||||||
Sbjct: 247 cttagcactatgacatgttccagcta 272
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>gb|AF227626.1|AF227626 Euphorbia esula 40S ribosomal protein S11 mRNA, complete cds
          Length = 745

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 149/188 (79%)
 Strand = Plus / Minus

                                                                       
Query: 200 ttgaatctcacagttttcgacaggggcctgcactggccaatgatgacatggncgccttcc 259
           ||||| |||||||| || ||||  |||||||| || ||||| || |||||| | || |||
Sbjct: 464 ttgaacctcacagtcttagacaaaggcctgcattgaccaataataacatggtctccctcc 405

                                                                       
Query: 260 ttgacacggnagcagggggagatgtgagctgggatgttggagtgcctcttctcatacctc 319
           || |||||| |||| ||||| |  || |||||||| ||||| || | |||||||||||||
Sbjct: 404 ttcacacggaagcatggggacacatgtgctgggatattggaatgacgcttctcatacctc 345

                                                                       
Query: 320 tgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcatcttg 379
           || || || || | ||| || ||||| ||||  |  ||||| || |||||||||||||| 
Sbjct: 344 tggtattttttgataaaatggaggtaattccgcctaacgataattgtcctgttcatcttt 285

                   
Query: 380 gcgctgtg 387
           || |||||
Sbjct: 284 gcactgtg 277
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>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence
          Length = 119718

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 245   acatggncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgc 304
             |||||| | ||||||||||||||| |||| || || |  |||||||| ||||| || |||
Sbjct: 56399 acatggtctccttccttgacacggaagcaaggtgatacatgagctggaatgtttgaatgc 56458

                           
Query: 305   ctcttctcatacct 318
             ||||||||||||||
Sbjct: 56459 ctcttctcatacct 56472



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 313   atacctctgatacttcttcacaaagtgaaggtagttcct 351
             |||||||||||||||||| | ||||||||| || |||||
Sbjct: 56568 atacctctgatacttcttaataaagtgaagataattcct 56606
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>gb|M31024.1|SOYRPS11A Soybean ribosomal protein S11 mRNA, 3' end
          Length = 677

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 164/209 (78%)
 Strand = Plus / Minus

                                                                       
Query: 191 ttcaggacattgaatctcacagttttcgacaggggcctgcactggccaatgatgacatgg 250
           |||| ||||||||| ||||| || || || || |||||||| || ||||| || || || 
Sbjct: 371 ttcaagacattgaacctcactgtcttagagagaggcctgcattgaccaataataacgtga 312

                                                                       
Query: 251 ncgccttccttgacacggnagcagggggagatgtgagctgggatgttggagtgcctcttc 310
            | |||||||| |||||| ||   || || || ||||| || || || ||||||||||||
Sbjct: 311 tccccttccttcacacggaaggcaggtgatatatgagcaggaatatttgagtgcctcttc 252

                                                                       
Query: 311 tcatacctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctg 370
           || |||||||| |||||||| | ||| || || || ||||| |  || || || ||||||
Sbjct: 251 tcgtacctctggtacttcttgataaaatggagataattccttctaacaataatagtcctg 192

                                        
Query: 371 ttcatcttggcgctgtggcaggttccagc 399
           |||||||| || ||||| || ||||||||
Sbjct: 191 ttcatcttagcactgtgacatgttccagc 163
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                          
Query: 321    gatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcatcttgg 380
              |||||||||||||||| ||||| |||| ||| || || ||||||||||| | |||||| |
Sbjct: 147719 gatacttcttcacaaaatgaagatagtccctacgaacaatgatcgtcctctgcatctttg 147660

                                
Query: 381    cgctgtggcaggttccag 398
              | ||||| || |||||||
Sbjct: 147659 cactgtgacaagttccag 147642



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 174    ttccagctggaacgaccttcaggacattgaatctcac 210
              ||||||| |||| |||||||||||||||||| |||||
Sbjct: 148080 ttccagccggaatgaccttcaggacattgaacctcac 148044
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>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project)
          Length = 122322

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                          
Query: 321    gatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcatcttgg 380
              |||||||||||||||| ||||| |||| ||| || || ||||||||||| | |||||| |
Sbjct: 120114 gatacttcttcacaaaatgaagatagtccctacgaacaatgatcgtcctctgcatctttg 120173

                                
Query: 381    cgctgtggcaggttccag 398
              | ||||| || |||||||
Sbjct: 120174 cactgtgacaagttccag 120191



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 174    ttccagctggaacgaccttcaggacattgaatctcac 210
              ||||||| |||| |||||||||||||||||| |||||
Sbjct: 119753 ttccagccggaatgaccttcaggacattgaacctcac 119789
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>emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, BAC clone T10C21
          Length = 77860

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 321   gatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcatcttgg 380
             |||||||||||||||| ||||| |||| ||| || || ||||||||||| | |||||| |
Sbjct: 46604 gatacttcttcacaaaatgaagatagtccctacgaacaatgatcgtcctctgcatctttg 46545

                               
Query: 381   cgctgtggcaggttccag 398
             | ||||| || |||||||
Sbjct: 46544 cactgtgacaagttccag 46527



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 174   ttccagctggaacgaccttcaggacattgaatctcac 210
             ||||||| |||| |||||||||||||||||| |||||
Sbjct: 46965 ttccagccggaatgaccttcaggacattgaacctcac 46929
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>emb|AJ005170.1|CPAJ5170 Cyanophora paradoxa partial mRNA for 40S ribosomal protein S11
          Length = 626

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 187 gaccttcaggacattgaatctcacagttttcgacaggggcctgcactggcc 237
           |||||||||||||||||| |  || || ||||||||||||| |||||||||
Sbjct: 439 gaccttcaggacattgaagcggacggtcttcgacaggggccggcactggcc 389
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>ref|XM_473070.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 444

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 316 cctctgatacttcttcacaaagtgaaggtagttcctgcgcacgatgatcgtcctgttcat 375
           |||||| |||||||| |||||||| || || ||||| || || || || |||||||||||
Sbjct: 300 cctctggtacttcttgacaaagtgcagataattcctccgaacaataatggtcctgttcat 241

                                     
Query: 376 cttggcgctgtggcaggttccagcta 401
           ||| || || || || ||||||||||
Sbjct: 240 cttagcactatgacatgttccagcta 215



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 263 acacggnagcagggggagatgtgagctgggatgttggagtgcctcttctcatacct 318
           |||||| |||| || || |||||||| || || ||||||||||||||||| |||||
Sbjct: 441 acacggaagcacggtgaaatgtgagcaggaatattggagtgcctcttctcgtacct 386
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>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence
          Length = 127696

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                         
Query: 226   cctgcactggccaatgatgacatggncgccttccttgacacggnagcagggggagatgtg 285
             |||||| |||||||| || |||||  | |||||||| |||||  ||||||| || |  ||
Sbjct: 63446 cctgcattggccaataataacatgatctccttccttaacacgaaagcagggtgatacatg 63387

                                           
Query: 286   agctgggatgttggagtgcctcttctcata 315
              || || ||||| |||||||||||||||||
Sbjct: 63386 ggcaggaatgtttgagtgcctcttctcata 63357
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>gb|DQ401082.1| Chlamydomonas sp. ICE-L 40S ribosomal protein S11 (RPS11) mRNA,
           complete cds
          Length = 576

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 302 tgcctcttctcatacctctgatacttcttcacaaagtgaaggta 345
           ||||||||||| |||||   |||||||||||||||||| |||||
Sbjct: 327 tgcctcttctcgtacctggcatacttcttcacaaagtgcaggta 284
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 316      cctctgatacttcttcacaaagtgaaggtagttcct 351
                ||||| ||||||||| ||||||||||| ||||||||
Sbjct: 24175707 cctctaatacttcttgacaaagtgaagatagttcct 24175742
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 316    cctctgatacttcttcacaaagtgaaggtagttcct 351
              ||||| ||||||||| ||||||||||| ||||||||
Sbjct: 134448 cctctaatacttcttgacaaagtgaagatagttcct 134483
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>emb|Y08722.1|ATDDDRP Arabidopsis thaliana rpoPt gene
          Length = 9080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 315  acctctgatacttcttcacaaagtgaaggtagttcct 351
            |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 8371 acctttgatacttcttaacaaaatgaagatagttcct 8335
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 368   ctgttcatcttggcgctgtggcagg 392
             ||||||||| |||||||||||||||
Sbjct: 99109 ctgttcatcctggcgctgtggcagg 99085
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 368    ctgttcatcttggcgctgtggcagg 392
              ||||||||| |||||||||||||||
Sbjct: 172128 ctgttcatcctggcgctgtggcagg 172104
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>gb|AC005967.3| Arabidopsis thaliana chromosome 2 clone F27D4 map CIC06C07, complete
            sequence
          Length = 96046

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 315  acctctgatacttcttcacaaagtgaaggtagttcct 351
            |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 7306 acctttgatacttcttaacaaaatgaagatagttcct 7342
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>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete
             sequence
          Length = 165092

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   atcagagtctgggcttaagca 142
             |||||||||||||||||||||
Sbjct: 42971 atcagagtctgggcttaagca 42951
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>gb|AC167168.5| Mus musculus chromosome 1, clone RP23-100P14, complete sequence
          Length = 204256

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    atgtgagctgggatgttgga 300
              ||||||||||||||||||||
Sbjct: 187165 atgtgagctgggatgttgga 187146
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>gb|AF125314.2| Mus musculus chromosome X clones MP1-C03180, MP1-C22301, CT7-374D15,
              proximal part, complete sequence
          Length = 300285

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    gagatgtgagctgggatgtt 297
              ||||||||||||||||||||
Sbjct: 233451 gagatgtgagctgggatgtt 233432
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>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24,
             Map qA7.1, complete sequences
          Length = 393632

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gagatgtgagctgggatgtt 297
             ||||||||||||||||||||
Sbjct: 24479 gagatgtgagctgggatgtt 24460
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>gb|BC056376.1| Mus musculus myotubularin related protein 1, mRNA (cDNA clone
            MGC:73476 IMAGE:6849757), complete cds
          Length = 4652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagatgtgagctgggatgtt 297
            ||||||||||||||||||||
Sbjct: 1518 gagatgtgagctgggatgtt 1499
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>ref|XM_974257.1| PREDICTED: Mus musculus myotubularin related protein 1 (Mtmr1), mRNA
          Length = 4255

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagatgtgagctgggatgtt 297
            ||||||||||||||||||||
Sbjct: 1138 gagatgtgagctgggatgtt 1119
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>gb|AF073997.1| Mus musculus myotubularin related protein 1 isoform A (Mtmr1) mRNA,
            complete cds; alternatively spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagatgtgagctgggatgtt 297
            ||||||||||||||||||||
Sbjct: 1491 gagatgtgagctgggatgtt 1472
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>dbj|AK051390.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130045I15 product:myotubularin
           related protein 1, full insert sequence
          Length = 3100

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gagatgtgagctgggatgtt 297
           ||||||||||||||||||||
Sbjct: 516 gagatgtgagctgggatgtt 497
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>dbj|AK048714.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230015P16 product:myotubularin
           related protein 1, full insert sequence
          Length = 3355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gagatgtgagctgggatgtt 297
           ||||||||||||||||||||
Sbjct: 771 gagatgtgagctgggatgtt 752
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>gb|BC057337.1| Mus musculus myotubularin related protein 1, mRNA (cDNA clone
            MGC:66969 IMAGE:6825916), complete cds
          Length = 4639

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagatgtgagctgggatgtt 297
            ||||||||||||||||||||
Sbjct: 1512 gagatgtgagctgggatgtt 1493
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>gb|AC135085.3| Mus musculus BAC clone RP24-317P24 from 1, complete sequence
          Length = 214594

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    atgtgagctgggatgttgga 300
              ||||||||||||||||||||
Sbjct: 160958 atgtgagctgggatgttgga 160977
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>ref|NM_016985.2| Mus musculus myotubularin related protein 1 (Mtmr1), mRNA
          Length = 4652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gagatgtgagctgggatgtt 297
            ||||||||||||||||||||
Sbjct: 1518 gagatgtgagctgggatgtt 1499
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>dbj|AB012087.1| Cyprinus carpio mRNA for 40S ribosomal protein S11, complete cds
          Length = 551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 gaccttcaggacattgaatctcac 210
           |||||||||||||||||| |||||
Sbjct: 440 gaccttcaggacattgaacctcac 417
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>emb|AL772294.6| Mouse DNA sequence from clone RP23-125F4 on chromosome X, complete
              sequence
          Length = 144678

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    gagatgtgagctgggatgtt 297
              ||||||||||||||||||||
Sbjct: 101776 gagatgtgagctgggatgtt 101757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,792,306
Number of Sequences: 3902068
Number of extensions: 2792306
Number of successful extensions: 48414
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48228
Number of HSP's gapped (non-prelim): 182
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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