ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23m04 |
|---|---|
| Clone Library Name | barley_pub |
>NUD19_ARATH (Q94A82) Probable NADH pyrophosphatase NUDT19, chloroplast| precursor (EC 3.6.1.22) (Nudix hydrolase 19) (AtNUDT19) Length = 438 Score = 164 bits (414), Expect = 3e-40 Identities = 75/103 (72%), Positives = 91/103 (88%) Frame = -2 Query: 638 GPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKV 459 GP++MPCQLM+GFFA+AK+LDI+VDK+ELEDAQWHSRE+VKKAL AEY KAQR++A KV Sbjct: 315 GPSSMPCQLMLGFFAFAKTLDINVDKEELEDAQWHSREEVKKALAVAEYRKAQRTAAAKV 374 Query: 458 NQICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 QICKG ER S S+D ++ES E APMF+PGP+AIAHHLIS+W Sbjct: 375 EQICKGVERSQSLSTDFNLESGELAPMFIPGPFAIAHHLISAW 417
>NUD12_MOUSE (Q9DCN1) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)| (Nucleoside diphosphate-linked moiety X motif 12) (Nudix motif 12) Length = 462 Score = 49.7 bits (117), Expect = 7e-06 Identities = 35/102 (34%), Positives = 42/102 (41%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVN 456 P MP LM+G A A S +I VDK E+EDA+W +RE V LT Sbjct: 389 PWPMPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVVDVLT---------------- 432 Query: 455 QICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 KG ++ FVP AIAH LI W Sbjct: 433 ---KGKQQA----------------FFVPPSRAIAHQLIKHW 455
>NUD12_HUMAN (Q9BQG2) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)| (Nucleoside diphosphate-linked moiety X motif 12) (Nudix motif 12) Length = 462 Score = 49.7 bits (117), Expect = 7e-06 Identities = 35/102 (34%), Positives = 42/102 (41%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVN 456 P MP LM+G A A S +I VDK E+EDA+W +RE V LT Sbjct: 389 PWPMPSSLMIGCLALAVSTEIKVDKNEIEDARWFTREQVLDVLT---------------- 432 Query: 455 QICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 KG ++ FVP AIAH LI W Sbjct: 433 ---KGKQQA----------------FFVPPSRAIAHQLIKHW 455
>NUD12_PONPY (Q5RD76) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)| (Nucleoside diphosphate-linked moiety X motif 12) (Nudix motif 12) Length = 462 Score = 49.3 bits (116), Expect = 1e-05 Identities = 35/102 (34%), Positives = 41/102 (40%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVN 456 P MP LM+G A A S +I VDK E+EDA W +RE V LT Sbjct: 389 PWPMPSSLMIGCLALAVSTEIKVDKNEIEDAHWFTREQVLDVLT---------------- 432 Query: 455 QICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 KG ++ FVP AIAH LI W Sbjct: 433 ---KGKQQA----------------FFVPPSRAIAHQLIKHW 455
>NUD13_MOUSE (Q8JZU0) Nucleoside diphosphate linked moiety X motif 13 (EC| 3.-.-.-) (Nudix motif 13) Length = 352 Score = 38.5 bits (88), Expect = 0.017 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = -2 Query: 614 LMVGFFAYAKS--LDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKG 441 LM+ A K +I V+ KELE A W S ++V AL Sbjct: 272 LMIACHATVKPGHTEIQVNLKELEAAAWFSLDEVTTALR--------------------- 310 Query: 440 AERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 L+++ E +P+ +P AIAHHLI W Sbjct: 311 ------RKGSLALQPSEASPLLLPPKLAIAHHLIKKW 341
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 36.6 bits (83), Expect = 0.065 Identities = 31/83 (37%), Positives = 36/83 (43%) Frame = -3 Query: 517 RKR*HSLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSY 338 R+R HS S R P R R K R R+P P A R R+P SP P P Sbjct: 514 RRRRHSHS-RSPSPSPRKRQ-KEPSPRRRRRSPSPPPARRRRSP----SPPPPPRR---- 563 Query: 337 RRGP*KGRQSCPAPSPTYDVPGP 269 RR P R+ P+P P P P Sbjct: 564 RRSPSLPRRRSPSPPPRRRSPSP 586 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/67 (28%), Positives = 25/67 (37%) Frame = -3 Query: 490 RKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQ 311 R P R + RA +PPP + +P R SP P+ I R P + Sbjct: 667 RSPPQNKRDSPSPRPRASHTSSSPPPLRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKT 726 Query: 310 SCPAPSP 290 PSP Sbjct: 727 KASTPSP 733 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Frame = -3 Query: 484 PRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSC 305 PR + RS S AR R PPP R+ + R SP P P RR P R S Sbjct: 537 PRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPR-----RRSPSPRRYSP 591 Query: 304 P-----APSP 290 P +PSP Sbjct: 592 PIQRRYSPSP 601
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 35.0 bits (79), Expect = 0.19 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = -3 Query: 544 PSGTAVKTLRKR*HSLSMRKPRDQVRSR-STKYARALREGRAPPPTSASRARNPLRCLSP 368 PS +A + RKR S PR Q+ R + ++ R R+P P A R R+P P Sbjct: 523 PSRSASPSPRKRQKETS---PRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAPPP 579 Query: 367 GPTPSLITSYRRGP*KGRQSCPAPSPTYDVPGP 269 P P R R+ P+P P P P Sbjct: 580 PPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSP 612 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/87 (28%), Positives = 37/87 (42%) Frame = -3 Query: 550 KMPSGTAVKTLRKR*HSLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLS 371 K P T+ + R S S PR + R S+ + +P P ++R R +S Sbjct: 371 KPPKRTSSPPRKTRRLSPSASPPRRRHRP-SSPATPPPKTRHSPTPQQSNRTRKSRVSVS 429 Query: 370 PGPTPSLITSYRRGP*KGRQSCPAPSP 290 PG T +T + +G K PAP P Sbjct: 430 PGRTSGKVTKH-KGTEKRESPSPAPKP 455
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 33.5 bits (75), Expect = 0.55 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 418 PPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSPTYDVPGP 269 P +S++ AR P+ L PGP P+ YRRGP P+ +P+ PGP Sbjct: 1032 PSSSSALARPPV--LHPGPVPASHLPYRRGPVPSLPVRPSRAPS-RTPGP 1078
>NPY1_CAEEL (Q19427) NADH pyrophosphatase (EC 3.6.1.22)| Length = 348 Score = 32.7 bits (73), Expect = 0.94 Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = -2 Query: 635 PNTMP-CQLMVGFFAYAK-SLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALK 462 P MP LM+ A AK I V ELE AQW +R VK+ALT + ++ Sbjct: 253 PWPMPDSSLMIAHVAVAKIDQKISVCPDELETAQWFTRHQVKEALTTTLADPLLKNL--- 309 Query: 461 VNQICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 P T D ++P AIAH +I W Sbjct: 310 -----------PRTLDD------RQTLHYIPPAGAIAHQMIRQW 336
>NUDC_SHISS (Q3YUY8) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 231
>NUDC_SHIFL (Q83IS3) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 231
>NUDC_SHIBS (Q31U01) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 231
>NUDC_ECOLI (P32664) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 231
>NUDC_ECO57 (Q8X6X7) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 231
>ZFH2_DROME (P28167) Zinc finger protein 2 (Zinc finger homeodomain protein 2)| Length = 3005 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = -2 Query: 566 DKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSV 402 +++ +D+ ++ L EYE+ ++ +N C A GP TSS +S+ Sbjct: 1852 ERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLNDTCSVAVTGPMTSSTISL 1906
>NUD13_HUMAN (Q86X67) Nucleoside diphosphate linked moiety X motif 13 (EC| 3.-.-.-) (Nudix motif 13) Length = 352 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Frame = -2 Query: 614 LMVGFFAYAK--SLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKG 441 LM+ A K +I V+ +ELE A W S ++V AL Sbjct: 272 LMIACHATVKPGQTEIQVNLRELETAAWFSHDEVATAL---------------------- 309 Query: 440 AERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 330 +GP T + P ++P AI+H LI W Sbjct: 310 KRKGPYTQ-----QQNGTFPFWLPPKLAISHQLIKEW 341
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 424 APPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSPTYDVPGPYLVRL 254 +PPP+ A +P SP P+PS S P P+P P+ P P V+L Sbjct: 333 SPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPS---PSPVAVKL 386
>LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hScrib)| Length = 1630 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -2 Query: 563 KKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSVESEEPA 384 ++ L A+ + E K+AL A K+ AL+ + ++ G T L +E P+ Sbjct: 1482 ERALSPAELRALEAEKRALWRAARMKSLEQDALRAQMVLSRSQEGRGTRGPLERLAEAPS 1541 Query: 383 PMFVPGP 363 P P P Sbjct: 1542 PAPTPSP 1548
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 31.2 bits (69), Expect = 2.7 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 260 SSSEIRQRMYSTLEHCRHTPCISYAADSYSRCVIT 156 + SE R+ LE+C PC S+A +S C +T Sbjct: 998 AESECRELPRVVLENCNEFPCPSWATSEWSECPVT 1032
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/78 (26%), Positives = 35/78 (44%) Frame = -3 Query: 499 LSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP*K 320 LS + R + + A +L+ R+P P + +A NP + + P TP S Sbjct: 160 LSPLQTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVS------- 212 Query: 319 GRQSCPAPSPTYDVPGPY 266 + S P+ SPT + P+ Sbjct: 213 PQSSQPSSSPTLLISSPH 230
>KLD7B_HUMAN (Q96G42) Kelch domain-containing protein 7B| Length = 495 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -3 Query: 424 APPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSPTYDVPGPYLVRLPKY 245 AP P + N + CL+P T + S + ++ P P + V P+++ LP Sbjct: 429 APAPLHCTTLGNTIYCLNPQVTATFTVSGGTAQFQAKELQPFPLGSTGVLSPFILTLPPE 488 Query: 244 DR 239 DR Sbjct: 489 DR 490
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = -3 Query: 496 SMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTP---SLITSYRRGP 326 S K R + R RS +R+ R+ P + S R+P + S P P S S RR Sbjct: 209 SYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRS- 267 Query: 325 *KGRQSCPAPS 293 + R P PS Sbjct: 268 -RSRSRSPLPS 277
>PO2F1_PIG (Q29076) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 745 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 445 RALREGRAPPPTSASRARNPLRCLSPGP------TPSLITS 341 R +E R PP+S + +P++ + P P TPSL+TS Sbjct: 432 RRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVGTTPSLVTS 472
>ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)| (CAP-50) Length = 503 Score = 30.8 bits (68), Expect = 3.6 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = -3 Query: 421 PPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSPTYDVPGPYLVRLP 251 PPPT S + G PS + SY P P P P + PGPY +LP Sbjct: 92 PPPTQPSVPPYGVYPPPGGNPPSGVPSYPPFPGAPVPGQPMPPPGHQPPGPYPGQLP 148
>PO2F1_CHICK (P15143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 739 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 445 RALREGRAPPPTSASRARNPLRCLSPGP------TPSLITS 341 R +E R PP+S + +P++ + P P TPSL+TS Sbjct: 426 RRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTS 466
>NUDC_HAEIN (P44710) NADH pyrophosphatase (EC 3.6.1.22)| Length = 264 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHS 531 P P MVGF A +S +I + + E+ DAQW S Sbjct: 197 PWAFPNSQMVGFLADYESGEITLQESEIHDAQWFS 231
>NUDC_HAEI8 (Q4QNB3) NADH pyrophosphatase (EC 3.6.1.22)| Length = 264 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHS 531 P P MVGF A +S +I + + E+ DAQW S Sbjct: 197 PWAFPNSQMVGFLADYESGEITLQESEIHDAQWFS 231
>NUDC_SALCH (Q57H59) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S +I +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGEIAIDPKELLEANWYHYDDL 231
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 30.8 bits (68), Expect = 3.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = -3 Query: 505 HSLSMRKPRDQVRSRSTKYARA-LREGRAPPPTSASRARNPLRCL-----SPGPTPSLIT 344 HS S R R + RSRS +R+ L R+ S SR+R+P RC SP P + Sbjct: 273 HSRSSRS-RSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAHRPRRHS 331 Query: 343 SYRRGP*KGRQSCPAPSP 290 S R P P P P Sbjct: 332 SSRVNP-------PGPPP 342
>PO2F1_RAT (P31503) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (Fragment) Length = 632 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 445 RALREGRAPPPTSASRARNPLRCLSPGP------TPSLITS 341 R +E R PP+S + +P++ + P P TPSL+TS Sbjct: 319 RRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTS 359
>PO2F1_MOUSE (P25425) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 770 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 445 RALREGRAPPPTSASRARNPLRCLSPGP------TPSLITS 341 R +E R PP+S + +P++ + P P TPSL+TS Sbjct: 433 RRQKEKRINPPSSGGTSSSPIKAIFPSPASLVATTPSLVTS 473
>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) Length = 577 Score = 30.8 bits (68), Expect = 3.6 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -3 Query: 427 RAPPPTSASRAR---NPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSP 290 ++PPP + P+ C SP P PS + S + +++ P+P+P Sbjct: 359 KSPPPAEKVEVKVSSAPIPCPSPSPAPSAVPSPPKNVAAEQKAAPSPAP 407
>PO2F1_HUMAN (P14859) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 743 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 445 RALREGRAPPPTSASRARNPLRCLSPGP------TPSLITS 341 R +E R PP+S + +P++ + P P TPSL+TS Sbjct: 430 RRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTS 470
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 30.4 bits (67), Expect = 4.6 Identities = 27/84 (32%), Positives = 34/84 (40%) Frame = -3 Query: 502 SLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP* 323 S MR+PR R TK+ARA A P + AS P SP PSL Sbjct: 163 SSMMREPRPASPPRETKHARA-----ADPMSFASILSGPTEETSPIKQPSL--------- 208 Query: 322 KGRQSCPAPSPTYDVPGPYLVRLP 251 ++ P P+ T P L +P Sbjct: 209 --PEALPGPATTITPAPPTLAPVP 230
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -3 Query: 427 RAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSP 290 +AP P A++ R PL+ +P PTP+ S P PAP+P Sbjct: 6 QAPTPAPAAQPR-PLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAP 50
>NED4L_HUMAN (Q96PU5) E3 ubiquitin-protein ligase NEDD4-like protein (EC| 6.3.2.-) (Nedd4-2) (NEDD4.2) Length = 975 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -3 Query: 502 SLSMRKPRDQVRSRSTKYARALREGRAPPPTS-ASRARNPLRCLSPGPTPSL 350 SL R+P ++RS S A A +G PPP++ A RAR+ PTPS+ Sbjct: 328 SLIQREPSSRLRSCSVTDAVA-EQGHLPPPSAPAGRARSSTVTGGEEPTPSV 378
>NUDC_SALTY (Q9L9I5) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S +I +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGEIVIDPKELLEANWYRYDDL 231
>NUDC_SALTI (Q8Z328) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S +I +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGEIVIDPKELLEANWYRYDDL 231
>NUDC_SALPA (Q5PKA4) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S +I +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGEIVIDPKELLEANWYRYDDL 231
>NUDC_ECOL6 (Q8FB75) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S +I +D KEL +A W+ +D+ Sbjct: 193 PWPFPQSLMTAFMAEYDSGEIVIDPKELLEANWYRYDDL 231
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 30.4 bits (67), Expect = 4.6 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Frame = -3 Query: 517 RKR*HSLSMR-KPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITS 341 R+R HS S P + R + T R +PPPT R R+P SP P P + Sbjct: 519 RRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPT--RRRRSP----SPAPPPRRRRT 572 Query: 340 YRRGP*KGRQSCPAPSPTYDVPGP 269 P R+ P+P P P P Sbjct: 573 PTPPP---RRRTPSPPPRRRSPSP 593 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -3 Query: 490 RKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTPSLITSYRRGP-*KGR 314 R P+ R + RA + +PPP + +P R SP P+ I R P K Sbjct: 674 RSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKI 733 Query: 313 QSCPAPSP 290 + +PSP Sbjct: 734 KKAASPSP 741 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -3 Query: 550 KMPSGTAVKTLRKR*HSLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLS 371 K P T+ + R S S PR + R S + +P P ++R R +S Sbjct: 373 KPPKRTSSPPRKTRRLSPSASPPRRRHRP-SPPATPPPKTRHSPTPQQSNRTRKSRVSVS 431 Query: 370 PGPTPSLITSYRRGP*KGRQSCPAPSP 290 PG T +T + +G K PAP P Sbjct: 432 PGRTSGKVTKH-KGTEKRESPSPAPKP 457
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 448 ARALREGRAPPPTSAS-RARNPLRCLSPGPTPSLITSYRRGP*KGRQSCPAPSPTYDVPG 272 A A EG AP P A A P +P P P+ + + P +G PAP+ + P Sbjct: 130 APAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEG-EAPA 188 Query: 271 P 269 P Sbjct: 189 P 189
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = -3 Query: 550 KMPSGTAVKTLRKR*HSLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLS 371 + PSG+ + R+R S S RD+ S A A G + S +R+P R S Sbjct: 822 RSPSGSRSPSPRRRRDSPSRSPVRDR---ESGGRAAAAAPGNSEARRGRSYSRSPSRTRS 878 Query: 370 PGPTPS 353 P P PS Sbjct: 879 PSPAPS 884
>OI106_HUMAN (Q9UPV9) 106 kDa O-GlcNAc transferase-interacting protein| (Trafficking protein, kinesin-binding 1) Length = 953 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 448 ARALREGRAPPPTSASRARNPLRCLSPGPTPSLI 347 A+ + GRA PT + + PL C PGP P+L+ Sbjct: 853 AKVVNSGRAHVPT-LTEEQGPLLCGPPGPAPALV 885
>PAG1_RAT (Q9JM80) Phosphoprotein associated with glycosphingolipid-enriched| microdomains 1 (Csk-binding protein) (Transmembrane phosphoprotein Cbp) Length = 424 Score = 30.0 bits (66), Expect = 6.1 Identities = 28/90 (31%), Positives = 37/90 (41%) Frame = -2 Query: 560 KELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSVESEEPAP 381 KEL+ A + D FAEY R+ + + AE TSSDL E+ P P Sbjct: 208 KELQGAHAEGKAD------FAEYASVDRNKKCRHST---NAESILGTSSDLDEETPPPVP 258 Query: 380 MFVPGPYAIAHHLISSWALEGAPKLPSSFS 291 + + A A E AP+ PS S Sbjct: 259 VKLLDENANLPEKGEHGAEEQAPEAPSGHS 288
>VP61_NPVAC (Q03209) 61 kDa protein| Length = 543 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Frame = -3 Query: 421 PPPTSASRARNP--LRCLSPGPTPSLITSYRRGP*KGRQSCPA-----PSPTYDVPGP 269 PPP + R+R P ++ +P P P+++ R K Q PA PSP ++P P Sbjct: 144 PPPQALPRSRRPSVVQPAAPAPVPTIV----REQTKPEQIIPAAPPPPPSPVPNIPAP 197
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 29.6 bits (65), Expect = 7.9 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 15/100 (15%) Frame = -3 Query: 544 PSGTAVKTLRKR*HSLSMRKPRDQVRSRSTKYARALREGR--------------APPPTS 407 P + ++R SLS + + SRST+ AR+ + + +PPP Sbjct: 655 PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVR 714 Query: 406 ASRARNPLRCLSPGPTPSLITSYRRGP-*KGRQSCPAPSP 290 + +P R SP P+ I R P K + +PSP Sbjct: 715 RGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSP 754 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -3 Query: 550 KMPSGTAVKTLRKR*HSLSMRKPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLS 371 K P T+ + R S S PR + R S + +P P ++R R +S Sbjct: 373 KPPKRTSSPPRKTRRLSPSASPPRRRHRP-SPPATPPPKTRHSPTPQQSNRTRKSRVSVS 431 Query: 370 PGPTPSLITSYRRGP*KGRQSCPAPSP 290 PG T +T + +G K PAP P Sbjct: 432 PGRTSGKVTKH-KGTEKRESPSPAPKP 457
>NUDC_PSEAE (O86062) NADH pyrophosphatase (EC 3.6.1.22)| Length = 278 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 623 PCQLMVGFFAYAKSLDIHVDKKELEDAQWHS 531 P LM+GF A S +I + E+EDAQW S Sbjct: 213 PHSLMLGFHAEYVSGEIVPQEDEIEDAQWFS 243
>NUDC_PSE14 (Q48IH8) NADH pyrophosphatase (EC 3.6.1.22)| Length = 278 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -2 Query: 623 PCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P +M+GF A S DI +E+EDA+W +D+ Sbjct: 213 PHSMMLGFHAEYDSGDIVPQAEEIEDARWFHIDDL 247
>TPES_PSEPU (P07383) Tropinesterase (EC 3.1.1.10) (Atropinesterase) (Atropine| acylhydrolase) Length = 272 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/61 (29%), Positives = 34/61 (55%) Frame = +1 Query: 406 LRSEEVLGPLSAPLHIWLTLSALDLWAFSYSANVSAFLTSSRLCHWASSSSFLSTCMSND 585 L++EE L+ P H+WL+ +A +++A S +LT+ L W + + ++ M ND Sbjct: 182 LKTEE----LAVPKHVWLS-AARGFSIINWTA-ASKYLTAKTLILWGNQNQPMTESMQND 235 Query: 586 L 588 + Sbjct: 236 I 236
>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)| Length = 1612 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/75 (24%), Positives = 33/75 (44%) Frame = -2 Query: 587 KSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDL 408 +S ++ ++ L A+ + E K+AL A K+ AL+ + ++ G L Sbjct: 1456 QSPELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPL 1515 Query: 407 SVESEEPAPMFVPGP 363 +E P+P P P Sbjct: 1516 ERLAEAPSPAPTPSP 1530
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -3 Query: 487 KPRDQVRSRSTKYARALREGRAPPPTSASRARNPLRCLSPGPTP 356 K + SRS +R+ R+PPPTS + + R SP +P Sbjct: 170 KSKSSSVSRSRSRSRSRSRSRSPPPTSKRESNSRSRSKSPPKSP 213
>HXB1_CHICK (P31259) Homeobox protein Hox-B1 (Ghox-lab)| Length = 309 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = -3 Query: 469 RSRSTKYARALREGRAPPPTS-----ASRARNPLRCLSPGPTPSLITS 341 ++R K + +EG APP S AS A + C SP +PS ++S Sbjct: 262 QNRRMKQKKREKEGLAPPAASRSAKEASEASDQSNCTSPEASPSSVSS 309
>NUDC_SHIDS (Q32AG9) NADH pyrophosphatase (EC 3.6.1.22)| Length = 257 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 635 PNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDV 519 P P LM F A S DI +D KEL +A W+ +++ Sbjct: 193 PWPFPQSLMTAFMADYDSGDIVIDPKELLEANWYRYDNL 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,746,921 Number of Sequences: 219361 Number of extensions: 2396247 Number of successful extensions: 7388 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 6818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7338 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
