| Clone Name | rbags23m02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | B2_DAUCA (P37707) B2 protein | 177 | 2e-44 | 2 | H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC ... | 32 | 1.1 | 3 | METE_AQUAE (O67606) 5-methyltetrahydropteroyltriglutamate--homoc... | 30 | 7.3 | 4 | VAL1_BCTV (P14991) AL1 protein (40.8 kDa protein) | 30 | 7.3 | 5 | SMR3A_HUMAN (Q99954) Submaxillary gland androgen-regulated prote... | 30 | 7.3 | 6 | AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK) | 29 | 9.6 |
|---|
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 177 bits (450), Expect = 2e-44 Identities = 82/94 (87%), Positives = 88/94 (93%) Frame = -2 Query: 614 GLPLFLYNYSTHQLHGIFEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLE 435 GLPLFLYNYSTHQLHG+FEAASFGG NIDP AWEDKK GESRFPAQVRV TRKIC+PLE Sbjct: 111 GLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLE 170 Query: 434 EDAFRPILHHYDGPKFRLELSITEALSLLDIFED 333 ED+FRPILHHYDGPKFRLEL+I EA+SLLDIFE+ Sbjct: 171 EDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
>H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)| (HS6ST-3) (mHS6ST-3) Length = 470 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/44 (45%), Positives = 22/44 (50%) Frame = -1 Query: 480 CTGEGGHKEDLRPTGGGRIPPYPAPLRRAQVPARAQHHRGSLPP 349 CT G E LR +G R P P+P RRAQ P R LPP Sbjct: 34 CTNFG---EQLR-SGEARPPAVPSPARRAQAPLDEWERRPQLPP 73
>METE_AQUAE (O67606) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 761 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -2 Query: 380 ELSITEALSLLDIFEDKDDA**RLLSADQGTVEEGTACNKMDW 252 E++ AL+LLD +D ++A +++ D+ EG K DW Sbjct: 575 EIAYQIALALLDEVKDLENAGIKVIQIDEPAFREGAPLKKRDW 617
>VAL1_BCTV (P14991) AL1 protein (40.8 kDa protein)| Length = 358 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 76 PXQYISYVHEGSSXAAITTHYRQRGAHNFIAHEMENPIKLTY 201 P +Y S + EG S T R GAHN+I ++ ++ Y Sbjct: 212 PLRYNSIIVEGDSRTGKTMWARSLGAHNYITGHLDFSLRTYY 253
>SMR3A_HUMAN (Q99954) Submaxillary gland androgen-regulated protein 3 homolog A| precursor (Proline-rich protein 5) (Proline-rich protein PBI) Length = 134 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/34 (52%), Positives = 18/34 (52%) Frame = -1 Query: 444 PTGGGRIPPYPAPLRRAQVPARAQHHRGSLPP*Y 343 P G GRIPP P P P R Q H SLPP Y Sbjct: 70 PYGPGRIPPSPPP---PYGPGRIQSH--SLPPPY 98
>AROK_XYLFA (Q9PDP4) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 180 Score = 29.3 bits (64), Expect = 9.6 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = -2 Query: 554 ASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLEEDAFRPILHHYDGPKFRLEL 375 A+ GG +DP E+++C E F +++ + L D +RP+L D + +L Sbjct: 79 ATGGGTILDP---ENRRCMQERGFVVFLKINVNTQLERLAHDRYRPLLQQIDRKQVLSDL 135 Query: 374 SIT 366 T Sbjct: 136 YAT 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,378,448 Number of Sequences: 219361 Number of extensions: 1622545 Number of successful extensions: 4256 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4254 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)