ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464030.1| Oryza sativa (japonica cultivar-group), mRNA 121 2e-24
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
3dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
6dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
7dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, compl... 121 2e-24
8dbj|AK059589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 46 0.11
10emb|CR352769.1| Gallus gallus finished cDNA, clone ChEST436e2 46 0.11
11gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome... 42 1.7
12gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome ... 42 1.7
13gb|AY104937.1| Zea mays PCO082324 mRNA sequence 42 1.7
14emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 ... 40 6.9
15gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complet... 40 6.9
16emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chro... 40 6.9
17gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 40 6.9
18gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, compl... 40 6.9
19dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 6.9
20dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 6.9
21dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.9
22ref|NM_001037361.1| Rattus norvegicus similar to IQ motif contai... 40 6.9
23gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, compl... 40 6.9
24gb|AY148093.1| Magnaporthe grisea trehalose-6-phosphate synthase... 40 6.9
25ref|XM_573292.1| PREDICTED: Rattus norvegicus hematopoietic cell... 40 6.9
26gb|BC079081.1| Rattus norvegicus hematopoietic cell specific Lyn... 40 6.9
27ref|NM_001011898.1| Rattus norvegicus hematopoietic cell specifi... 40 6.9
28gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complet... 40 6.9
29gb|BC083607.1| Rattus norvegicus similar to IQ motif containing ... 40 6.9
30emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chro... 40 6.9 
>ref|XM_464030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1079

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
           ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 870 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 817

                                                                       
Query: 372 tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
           |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 816 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 757

                                                                       
Query: 432 gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
           |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 756 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 697

                           
Query: 492 ccttggagggtctcct 507
           ||||| || |||||||
Sbjct: 696 ccttgcagcgtctcct 681
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                           
Query: 312     tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
               ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 1787819 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 1787766

                                                                           
Query: 372     tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
               |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 1787765 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 1787706

                                                                           
Query: 432     gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
               |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 1787705 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 1787646

                               
Query: 492     ccttggagggtctcct 507
               ||||| || |||||||
Sbjct: 1787645 ccttgcagcgtctcct 1787630
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G11
          Length = 143943

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                          
Query: 312    tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
              ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 105831 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 105778

                                                                          
Query: 372    tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
              |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 105777 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 105718

                                                                          
Query: 432    gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
              |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 105717 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 105658

                              
Query: 492    ccttggagggtctcct 507
              ||||| || |||||||
Sbjct: 105657 ccttgcagcgtctcct 105642
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>dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D06, full
           insert sequence
          Length = 1080

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
           ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 853 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 800

                                                                       
Query: 372 tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
           |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 799 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 740

                                                                       
Query: 432 gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
           |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 739 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 680

                           
Query: 492 ccttggagggtctcct 507
           ||||| || |||||||
Sbjct: 679 ccttgcagcgtctcct 664
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                         
Query: 312   tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
             ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 24463 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 24410

                                                                         
Query: 372   tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
             |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 24409 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 24350

                                                                         
Query: 432   gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
             |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 24349 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 24290

                             
Query: 492   ccttggagggtctcct 507
             ||||| || |||||||
Sbjct: 24289 ccttgcagcgtctcct 24274
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>dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B19, full
           insert sequence
          Length = 1079

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
           ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 870 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 817

                                                                       
Query: 372 tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
           |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 816 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 757

                                                                       
Query: 432 gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
           |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 756 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 697

                           
Query: 492 ccttggagggtctcct 507
           ||||| || |||||||
Sbjct: 696 ccttgcagcgtctcct 681
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>dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, complete cds
          Length = 1045

 Score =  121 bits (61), Expect = 2e-24
 Identities = 162/196 (82%), Gaps = 6/196 (3%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
           ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 855 tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 802

                                                                       
Query: 372 tccatggagtcgatgatctcctggatcctcttggagtcgatcatggagaaaggctcaacg 431
           |||||||| ||||| || || |||||||||||   |||||||||    || |||||||||
Sbjct: 801 tccatggaatcgattatttcttggatcctcttcacgtcgatcatctcaaatggctcaacg 742

                                                                       
Query: 432 gtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctca 491
           |||||||| ||| ||||||| ||||| |||| ||||||||| ||||| || |||||||||
Sbjct: 741 gtgccatcgtcctttctgccaacaatagcaacggtgcagttggagctggttagcttctca 682

                           
Query: 492 ccttggagggtctcct 507
           ||||| || |||||||
Sbjct: 681 ccttgcagcgtctcct 666
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>dbj|AK059589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C09, full
           insert sequence
          Length = 306

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 76/92 (82%), Gaps = 6/92 (6%)
 Strand = Plus / Minus

                                                                       
Query: 312 tcctcctgcatcgagcttgattcagccggagcatcggccgctggcgcctcgtcagcagcc 371
           ||||||||||||||||| || ||||||      || |||||||| ||||| || ||||||
Sbjct: 95  tcctcctgcatcgagctcgactcagcc------tctgccgctggtgcctcctcggcagcc 42

                                           
Query: 372 tccatggagtcgatgatctcctggatcctctt 403
           |||||||| ||||| || || |||||||||||
Sbjct: 41  tccatggaatcgattatttcttggatcctctt 10
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 241     gtgccggggcatctggtgctgcg 263
               |||||||||||||||||||||||
Sbjct: 2533373 gtgccggggcatctggtgctgcg 2533395
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>emb|CR352769.1| Gallus gallus finished cDNA, clone ChEST436e2
          Length = 928

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 288 gcagctgggggagcatcgcccct 310
           |||||||||||||||||||||||
Sbjct: 914 gcagctgggggagcatcgcccct 892
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>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence
          Length = 245594

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     acatgatagataaaaatcaat 59
              |||||||||||||||||||||
Sbjct: 206096 acatgatagataaaaatcaat 206116
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>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence
          Length = 203321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     acatgatagataaaaatcaat 59
              |||||||||||||||||||||
Sbjct: 140852 acatgatagataaaaatcaat 140872
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>gb|AY104937.1| Zea mays PCO082324 mRNA sequence
          Length = 1160

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                       
Query: 431 ggtgccatcctcccttctgccgacaatggcaatggtgcagttagagctcgtcagcttctc 490
           |||||| |||||| | ||||| || ||||| |  |||||||| ||||| | |||||||||
Sbjct: 806 ggtgccgtcctccttcctgcctacgatggccaccgtgcagttggagctggacagcttctc 747

                            
Query: 491 accttggagggtctcct 507
           ||| || || |||||||
Sbjct: 746 accctgcagcgtctcct 730
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>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
             complete sequence
          Length = 114380

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cacagaagcaaagagtacac 113
             ||||||||||||||||||||
Sbjct: 98409 cacagaagcaaagagtacac 98390
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>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence
          Length = 157928

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ggagcatcgcccctgtcctcctgc 320
              |||||||| |||||||||||||||
Sbjct: 102624 ggagcatctcccctgtcctcctgc 102601
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>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
              complete sequence
          Length = 144177

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     atagataaaaatcaatctgt 63
              ||||||||||||||||||||
Sbjct: 111260 atagataaaaatcaatctgt 111241
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>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete
             sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   ggagcatcgcccctgtcctcctgc 320
             |||||||| |||||||||||||||
Sbjct: 18386 ggagcatctcccctgtcctcctgc 18363
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>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence
          Length = 194718

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   gggtgggacagacatgacac 203
             ||||||||||||||||||||
Sbjct: 25887 gggtgggacagacatgacac 25868
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 388     tctcctggatcctcttggag 407
               ||||||||||||||||||||
Sbjct: 1403716 tctcctggatcctcttggag 1403735
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 358    cctcgtcagcagcctccatggagtcgat 385
              ||||||||||||| |||||||| |||||
Sbjct: 870859 cctcgtcagcagcttccatggattcgat 870832
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>dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730058C04 product:alpha
           thalassemia/mental retardation syndrome X-linked homolog
           (human), full insert sequence
          Length = 5433

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  gcacagaagcaaagagtaca 112
           ||||||||||||||||||||
Sbjct: 532 gcacagaagcaaagagtaca 513
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>ref|NM_001037361.1| Rattus norvegicus similar to IQ motif containing D (LOC498184),
           mRNA
          Length = 1921

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 381 tcgatgatctcctggatcctcttg 404
           ||||||||||||||| ||||||||
Sbjct: 981 tcgatgatctcctggttcctcttg 958
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>gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, complete sequence
          Length = 123495

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   aatgatggcaacctttctaa 135
             ||||||||||||||||||||
Sbjct: 29723 aatgatggcaacctttctaa 29704
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>gb|AY148093.1| Magnaporthe grisea trehalose-6-phosphate synthase subunit 1 (TPS1)
            gene, complete cds
          Length = 7671

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  attcagccggagcatcggcc 350
            ||||||||||||||||||||
Sbjct: 3406 attcagccggagcatcggcc 3425
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>ref|XM_573292.1| PREDICTED: Rattus norvegicus hematopoietic cell specific Lyn
           substrate 1 (predicted) (Hcls1_predicted), mRNA
          Length = 1978

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ctggtgctgcgggctcgtcc 272
           ||||||||||||||||||||
Sbjct: 933 ctggtgctgcgggctcgtcc 914
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>gb|BC079081.1| Rattus norvegicus hematopoietic cell specific Lyn substrate 1, mRNA
           (cDNA clone MGC:94041 IMAGE:7122756), complete cds
          Length = 1976

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ctggtgctgcgggctcgtcc 272
           ||||||||||||||||||||
Sbjct: 905 ctggtgctgcgggctcgtcc 886
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>ref|NM_001011898.1| Rattus norvegicus hematopoietic cell specific Lyn substrate 1
           (Hcls1), mRNA
          Length = 1976

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 ctggtgctgcgggctcgtcc 272
           ||||||||||||||||||||
Sbjct: 905 ctggtgctgcgggctcgtcc 886
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>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence
          Length = 237935

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ggagcatcgcccctgtcctcctgc 320
              |||||||| |||||||||||||||
Sbjct: 196773 ggagcatctcccctgtcctcctgc 196750
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>gb|BC083607.1| Rattus norvegicus similar to IQ motif containing D, mRNA (cDNA
           clone MGC:94359 IMAGE:7133364), complete cds
          Length = 1921

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 381 tcgatgatctcctggatcctcttg 404
           ||||||||||||||| ||||||||
Sbjct: 981 tcgatgatctcctggttcctcttg 958
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>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete
             sequence
          Length = 181805

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gcacagaagcaaagagtaca 112
             ||||||||||||||||||||
Sbjct: 41141 gcacagaagcaaagagtaca 41160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,935,889
Number of Sequences: 3902068
Number of extensions: 3935889
Number of successful extensions: 69779
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69656
Number of HSP's gapped (non-prelim): 116
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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