| Clone Name | rbaal1b22 |
|---|---|
| Clone Library Name | barley_pub |
>CP192_CARAU (O73686) Cytochrome P450 19 type 2 (EC 1.14.14.1) (Ovarian| aromatase) (CYPXIXA2) (Estrogen synthetase) (P-450AROM) Length = 518 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = -3 Query: 132 SWYGAQANLCAAFPTLPSTPMFVL----YHWLPDLQIAGPC 22 S YGAQ N+C A TL + +L +HW + GPC Sbjct: 31 SSYGAQDNVCGAMATLLLLLLCLLLAIRHHWTEKDHVPGPC 71
>HMB1_TRIGR (P09080) Homeobox protein HB1 (TGHBOX1) (Fragment)| Length = 307 Score = 30.0 bits (66), Expect = 7.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -1 Query: 500 ASGLGKQRFRGRLTA--AGSSLYVHTTSTVSRDHLGRLFSPCK 378 A+ LG +RGR+ A AG+ V + + +H ++ SPCK Sbjct: 126 AAELGDGSYRGRVNALAAGTGCLVSAAAEPNNNHCSQVMSPCK 168
>SOX3_MOUSE (P53784) Transcription factor SOX-3| Length = 375 Score = 29.6 bits (65), Expect = 9.5 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Frame = -3 Query: 312 WPPAAYELN*ILMRQDGTSQSQHAPALSSPLPTDGLPLLHYY------YFPSLPTG 163 W AY L + Q G +Q P++SSP P LP +H Y Y P +P G Sbjct: 196 WANGAYSL---VQEQLGYAQP---PSMSSPPPPPALPQMHRYDMAGLQYSPMMPPG 245
>NU4M_LATCH (O03173) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 461 Score = 29.6 bits (65), Expect = 9.5 Identities = 17/70 (24%), Positives = 26/70 (37%) Frame = -3 Query: 222 LPTDGLPLLHYYYFPSLPTGGGREWW*PSCSWYGAQANLCAAFPTLPSTPMFVLYHWLPD 43 L T +PL+ + Y L T G WW L P++ ++ WLP Sbjct: 172 LGTLSMPLIQHMYQMKLHTHGDMMWW------------TACLLAFLVKMPLYGVHLWLPK 219 Query: 42 LQIAGPCSSS 13 + P + S Sbjct: 220 AHVEAPIAGS 229
>GUAC_LACAC (Q5FHY3) GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate| oxidoreductase) (Guanosine monophosphate reductase) Length = 330 Score = 29.6 bits (65), Expect = 9.5 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 411 TGYCTGGMYVQARACCCEPASEPLLAQSG 497 TG+ TGG + A C + AS+PL+A G Sbjct: 186 TGFGTGGWQLAALRMCSKVASKPLIADGG 214
>Y681_PYRAE (Q8ZYP4) UPF0179 protein PAE0681| Length = 167 Score = 29.6 bits (65), Expect = 9.5 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +3 Query: 633 YLLPPECQDCQWWPVCM 683 + +P EC+DC+ +PVCM Sbjct: 22 FSIPEECKDCRLYPVCM 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,579,508 Number of Sequences: 219361 Number of extensions: 2015343 Number of successful extensions: 5666 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5345 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5660 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)