>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 347      ccatcatctgatctgtacatcatgtatcttctattctgaatctaatgctaccaaatcctt 406
                ||||||||| |||| |||||| |||||||||| ||||| |||||||||||||||||| ||
Sbjct: 31949062 ccatcatctaatctatacatcctgtatcttctgttctgcatctaatgctaccaaatcgtt 31949003

                  
Query: 407      tt 408
                ||
Sbjct: 31949002 tt 31949001



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                        
Query: 213      catgatctcttgttggggagattccgctgtcctttctgca 252
                |||||||||||||| || ||| || |||||||||||||||
Sbjct: 31949201 catgatctcttgtttgg-agaatctgctgtcctttctgca 31949163



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 529      gtcaaggtaatctacaggcgagtcttcagggcgtcgttttatcctttggaagatgtcatc 588
                |||||||||||| ||||||   ||| |||| ||||||||||   |||||||||| |||||
Sbjct: 31948896 gtcaaggtaatccacaggcatatctgcaggacgtcgttttaatttttggaagatttcatc 31948837

>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 347    ccatcatctgatctgtacatcatgtatcttctattctgaatctaatgctaccaaatcctt 406
              ||||||||| |||| |||||| |||||||||| ||||| |||||||||||||||||| ||
Sbjct: 110063 ccatcatctaatctatacatcctgtatcttctgttctgcatctaatgctaccaaatcgtt 110004

                
Query: 407    tt 408
              ||
Sbjct: 110003 tt 110002



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                      
Query: 213    catgatctcttgttggggagattccgctgtcctttctgca 252
              |||||||||||||| || ||| || |||||||||||||||
Sbjct: 110202 catgatctcttgtttgg-agaatctgctgtcctttctgca 110164



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                          
Query: 529    gtcaaggtaatctacaggcgagtcttcagggcgtcgttttatcctttggaagatgtcatc 588
              |||||||||||| ||||||   ||| |||| ||||||||||   |||||||||| |||||
Sbjct: 109897 gtcaaggtaatccacaggcatatctgcaggacgtcgttttaatttttggaagatttcatc 109838

>dbj|AK068256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147A18, full
            insert sequence
          Length = 2939

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 347  ccatcatctgatctgtacatcatgtatcttctattctgaatctaatgctaccaaatcctt 406
            ||||||||| |||| |||||| |||||||||| ||||| |||||||||||||||||| ||
Sbjct: 2596 ccatcatctaatctatacatcctgtatcttctgttctgcatctaatgctaccaaatcgtt 2537

              
Query: 407  tt 408
            ||
Sbjct: 2536 tt 2535



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                    
Query: 213  catgatctcttgttggggagattccgctgtcctttctgca 252
            |||||||||||||| || ||| || |||||||||||||||
Sbjct: 2735 catgatctcttgtttgg-agaatctgctgtcctttctgca 2697



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 529  gtcaaggtaatctacaggcgagtcttcagggcgtcgttttatcctttggaagatgtcatc 588
            |||||||||||| ||||||   ||| |||| ||||||||||   |||||||||| |||||
Sbjct: 2430 gtcaaggtaatccacaggcatatctgcaggacgtcgttttaatttttggaagatttcatc 2371

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 370    gtatcttctattctgaatctaat 392
              |||||||||||||||||||||||
Sbjct: 678510 gtatcttctattctgaatctaat 678532

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 370    gtatcttctattctgaatctaat 392
              |||||||||||||||||||||||
Sbjct: 678508 gtatcttctattctgaatctaat 678530

>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 370   gtatcttctattctgaatctaat 392
             |||||||||||||||||||||||
Sbjct: 64391 gtatcttctattctgaatctaat 64413

>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence
          Length = 169497

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 565   ttttatcctttggaagatgtca 586
             ||||||||||||||||||||||
Sbjct: 52446 ttttatcctttggaagatgtca 52467

>gb|AY618694.1| Avena ventricosa strain CAV2835 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AY618693.1| Avena strigosa strain CI3815 cycloartenol synthase gene, complete cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AY618692.1| Avena prostrata strain CC7060 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AY618691.1| Avena longiglumis strain CC7250 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AY618690.1| Avena longiglumis strain CC4719 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AY618689.1| Avena clauda strain CAV5566/1 cycloartenol synthase gene, complete
            cds
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>emb|AJ311790.1|AST311790 Avena strigosa mRNA for cycloartenol synthase (cs1 gene)
          Length = 2280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 209  ctcccatgatctcttgttggggagattcc 237
            ||||||||||||||||||| ||| |||||
Sbjct: 2176 ctcccatgatctcttgttgaggaaattcc 2148

>gb|AC078963.16| Homo sapiens 12q BAC RP11-362K2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 123253

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    gagggcgccttcagcttccac 331
              |||||||||||||||||||||
Sbjct: 119923 gagggcgccttcagcttccac 119943

>gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, complete sequence
          Length = 182116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 126   acatttaataacaagtaaaat 146
             |||||||||||||||||||||
Sbjct: 72128 acatttaataacaagtaaaat 72108

>ref|XM_467891.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 529  gtcaaggtaatctacaggcgagtcttcagggcgtcgttttatcctttggaagatgtcatc 588
            |||||||||||| ||||||   ||| |||| ||||||||||   |||||||||| |||||
Sbjct: 2148 gtcaaggtaatccacaggcatatctgcaggacgtcgttttaatttttggaagatttcatc 2089

>ref|XM_424065.1| PREDICTED: Gallus gallus similar to Rho GTPase-activating protein;
           brain-specific Rho GTP-ase-activating protein; rac
           GTPase activating protein; GAB-associated CDC42; RhoGAP
           involved in the -catenin-N-cadherin and NMDA receptor
           signaling (LOC426417), partial mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 aagtgtgatgcagtcacgct 210
           ||||||||||||||||||||
Sbjct: 696 aagtgtgatgcagtcacgct 715

>gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosome 18, complete
             sequence
          Length = 192563

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   gaagcacaccaaaaaccatc 351
             ||||||||||||||||||||
Sbjct: 29546 gaagcacaccaaaaaccatc 29565

>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence
          Length = 220804

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   gaagcacaccaaaaaccatc 351
             ||||||||||||||||||||
Sbjct: 18921 gaagcacaccaaaaaccatc 18902

>ref|XM_645260.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (225.t00005)
           partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 taataacaagtaaaataaca 150
           ||||||||||||||||||||
Sbjct: 290 taataacaagtaaaataaca 271

>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence
          Length = 140523

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    caatgttctaacttctaagg 443
              ||||||||||||||||||||
Sbjct: 126068 caatgttctaacttctaagg 126087

>emb|AL139282.10| Human DNA sequence from clone RP1-144B6 on chromosome 1 Contains part
             of the PLAC3 gene for placenta-specific 3 (PLAC3),
             complete sequence
          Length = 90882

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   ttttatcctttggaagatgt 584
             ||||||||||||||||||||
Sbjct: 30851 ttttatcctttggaagatgt 30870

>ref|NM_001031606.1| Gallus gallus similar to hypothetical protein (LOC431499), mRNA
          Length = 2390

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagtgtgatgcagtcacgct 210
            ||||||||||||||||||||
Sbjct: 1094 aagtgtgatgcagtcacgct 1113

>emb|AJ851601.1| Gallus gallus mRNA for hypothetical protein, clone 10i2
          Length = 2390

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagtgtgatgcagtcacgct 210
            ||||||||||||||||||||
Sbjct: 1094 aagtgtgatgcagtcacgct 1113

>emb|AL663082.5| Mouse DNA sequence from clone RP23-327G1 on chromosome 11 Contains the 3'
              end of the Ankfy1 gene for ankyrin repeat and FYVE domain
              containing 1, a new gene, the gene for a novel ZZ type zinc
              finger domain containing protein, the 5' end of the Atp2a3
              gene for ubiquitous Ca++ transporting ATPase and two CpG
              islands, complete sequence
          Length = 243654

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    attcccagagctcaatgttc 431
              ||||||||||||||||||||
Sbjct: 235494 attcccagagctcaatgttc 235513

>emb|BX530059.4| Zebrafish DNA sequence from clone DKEYP-111B3 in linkage group 21,
             complete sequence
          Length = 179045

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   gtgtaaagcagaaaagtgtg 197
             ||||||||||||||||||||
Sbjct: 49127 gtgtaaagcagaaaagtgtg 49146

>ref|XM_695009.1| PREDICTED: Danio rerio similar to TBP-associated factor 172 (TAF-172)
            (TAF(II)170) (LOC571424), partial mRNA
          Length = 2885

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  taaagcagaaaagtgtgatg 200
            ||||||||||||||||||||
Sbjct: 2126 taaagcagaaaagtgtgatg 2145

>gb|AC011037.8| Homo sapiens chromosome 8, clone RP11-7F18, complete sequence
          Length = 175023

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgtcaaggtaatctacaggc 547
             ||||||||||||||||||||
Sbjct: 61727 tgtcaaggtaatctacaggc 61746

>emb|BX530089.9| Zebrafish DNA sequence from clone CH211-129M12 in linkage group 3,
              complete sequence
          Length = 176077

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    taaagcagaaaagtgtgatg 200
              ||||||||||||||||||||
Sbjct: 149560 taaagcagaaaagtgtgatg 149541

>emb|BX929744.2| Gallus gallus finished cDNA, clone ChEST798m12
          Length = 807

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 aagtgtgatgcagtcacgct 210
           ||||||||||||||||||||
Sbjct: 716 aagtgtgatgcagtcacgct 735

>gb|AC092569.2| Homo sapiens BAC clone CTD-2024L7 from 2, complete sequence
          Length = 139880

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 551   tcttcagggcgtcgttttatcctt 574
             |||||||||| |||||||||||||
Sbjct: 79847 tcttcagggcctcgttttatcctt 79824

>dbj|AK110057.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-D06, full
            insert sequence
          Length = 3461

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  ggcagagggcgccttcagct 326
            ||||||||||||||||||||
Sbjct: 1027 ggcagagggcgccttcagct 1046

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     aatacatattcaacatttaa 133
               ||||||||||||||||||||
Sbjct: 2665072 aatacatattcaacatttaa 2665053

>emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in linkage group 4,
            complete sequence
          Length = 249278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  acatattcaacatttaataa 136
            ||||||||||||||||||||
Sbjct: 2343 acatattcaacatttaataa 2362

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 566     tttatcctttggaagatgtc 585
               ||||||||||||||||||||
Sbjct: 4326170 tttatcctttggaagatgtc 4326189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,872,124
Number of Sequences: 3902068
Number of extensions: 4872124
Number of successful extensions: 85395
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85218
Number of HSP's gapped (non-prelim): 174
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)