ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24a16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds Length = 210 Score = 252 bits (127), Expect = 6e-64 Identities = 175/191 (91%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 154 tcattcctcttcctcatcaccaccagcgtcgccgccaccacattgccttcttctggttct 213 ||||||||||||||| |||||||| || ||||| ||||||| |||||||||||||||||| Sbjct: 210 tcattcctcttcctcgtcaccacctgcatcgccaccaccac-ttgccttcttctggttct 152 Query: 214 tcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtgagaagtcaatgt 273 | ||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 151 ttctcttcacccggcctgcagggcctccgccgaatggacttgtcagtgagaagtcgatgt 92 Query: 274 gcttctnagattcaaccctcaccatnaatgaggggacattgacgatctgcctgccaaccc 333 |||||| ||||||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 91 gcttctcggattcaaccctcaccatgaacgacgggacattgacgatctgcctgccaaccc 32 Query: 334 tnatgtggcgt 344 | ||||||||| Sbjct: 31 tgatgtggcgt 21
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 Score = 168 bits (85), Expect = 7e-39 Identities = 145/165 (87%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 176 ccagcgtcgccgccaccacattgccttcttctggttcttcctcttnaccctgcctgcagg 235 ||||| ||||||||||| | ||||||||||||| ||||| ||||| ||||| ||||| || Sbjct: 644 ccagcatcgccgccaccgc-ttgccttcttctgattctttctcttcacccttcctgcggg 586 Query: 236 gcctccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcac 295 ||||||||||||||| |||| |||||| |||||||||||||||| ||| || |||||||| Sbjct: 585 gcctccaccgaatgggcttgacagtgaaaagtcaatgtgcttctcagactccaccctcac 526 Query: 296 catnaatgaggggacattgacgatctgcctgccaaccctnatgtg 340 ||| ||||| ||||| ||||| || |||||||||||||| ||||| Sbjct: 525 catgaatgatgggacgttgacaatttgcctgccaaccctgatgtg 481
>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full insert sequence Length = 884 Score = 168 bits (85), Expect = 7e-39 Identities = 132/149 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 611 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 552 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 551 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 492 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 491 caatttgcctgccgaccctgatgtggcgt 463
>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full insert sequence Length = 884 Score = 168 bits (85), Expect = 7e-39 Identities = 132/149 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 611 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 552 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 551 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 492 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 491 caatttgcctgccgaccctgatgtggcgt 463
>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full insert sequence Length = 970 Score = 168 bits (85), Expect = 7e-39 Identities = 132/149 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 614 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 555 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 554 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 495 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 494 caatttgcctgccgaccctgatgtggcgt 466
>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full insert sequence Length = 972 Score = 168 bits (85), Expect = 7e-39 Identities = 132/149 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 611 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 552 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 551 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 492 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 491 caatttgcctgccgaccctgatgtggcgt 463
>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full insert sequence Length = 955 Score = 161 bits (81), Expect = 2e-36 Identities = 131/149 (87%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 621 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 562 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 561 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 502 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 501 caatttgcctgccgaccctgatgtggcgt 473
>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full insert sequence Length = 964 Score = 161 bits (81), Expect = 2e-36 Identities = 131/149 (87%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 610 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 551 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 550 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 491 Query: 316 cgatctgcctgccaaccctnatgtggcgt 344 | || |||||||| ||||| ||||||||| Sbjct: 490 caatttgcctgccgaccctgatgtggcgt 462
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 2970552 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 2970493 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 2970492 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 2970433 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 2970432 caatttgcctgccgaccct 2970414 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 12062154 ctgcctgcagggcctccacc 12062173
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Plus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| |||| Sbjct: 12828 ttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggcttg 12887 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 12888 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttga 12947 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 12948 caatttgcctgccgaccct 12966 Score = 147 bits (74), Expect = 3e-32 Identities = 122/139 (87%) Strand = Plus / Plus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 8147 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 8206 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 8207 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 8266 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 8267 caatttgcctgccgaccct 8285
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Plus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| |||| Sbjct: 124346 ttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggcttg 124405 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 124406 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttga 124465 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 124466 caatttgcctgccgaccct 124484 Score = 147 bits (74), Expect = 3e-32 Identities = 122/139 (87%) Strand = Plus / Plus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 119665 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 119724 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 119725 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 119784 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 119785 caatttgcctgccgaccct 119803
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 108039 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 107980 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 107979 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 107920 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 107919 caatttgcctgccgaccct 107901
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| |||| Sbjct: 22328470 ttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggcttg 22328411 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 22328410 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttga 22328351 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 22328350 caatttgcctgccgaccct 22328332 Score = 147 bits (74), Expect = 3e-32 Identities = 122/139 (87%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 22333151 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 22333092 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 22333091 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 22333032 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 22333031 caatttgcctgccgaccct 22333013 Score = 54.0 bits (27), Expect = 3e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 253 ttgtcagtgagaagtcaatgtgcttctnagattcaaccctca 294 |||| |||||||||||||||||||| | ||| |||||||||| Sbjct: 19413080 ttgttagtgagaagtcaatgtgctttttagactcaaccctca 19413121 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 27900597 ctgcctgcagggcctccacc 27900578 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1109048 ctgcctgcagggcctccacc 1109067
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 2970663 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 2970604 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| || || |||| |||| Sbjct: 2970603 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatgttga 2970544 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 2970543 caatttgcctgccgaccct 2970525 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 12058917 ctgcctgcagggcctccacc 12058936
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 1e-34 Identities = 123/139 (88%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||| ||| ||||| || | ||||||||||||||||| |||| Sbjct: 22638381 ttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggcttg 22638322 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 22638321 tcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttga 22638262 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 22638261 caatttgcctgccgaccct 22638243 Score = 147 bits (74), Expect = 3e-32 Identities = 122/139 (87%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttg 255 ||||||||||||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 22643062 ttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggcttg 22643003 Query: 256 tcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattga 315 ||||||||||||||||||| |||| ||| |||||||||||||| || || |||| |||| Sbjct: 22643002 tcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttga 22642943 Query: 316 cgatctgcctgccaaccct 334 | || |||||||| ||||| Sbjct: 22642942 caatttgcctgccgaccct 22642924 Score = 54.0 bits (27), Expect = 3e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 253 ttgtcagtgagaagtcaatgtgcttctnagattcaaccctca 294 |||| |||||||||||||||||||| | ||| |||||||||| Sbjct: 19572629 ttgttagtgagaagtcaatgtgctttttagactcaaccctca 19572670 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 27924585 ctgcctgcagggcctccacc 27924566 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1106769 ctgcctgcagggcctccacc 1106788
>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence Length = 969 Score = 91.7 bits (46), Expect = 1e-15 Identities = 120/146 (82%) Strand = Plus / Plus Query: 198 gccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtc 257 ||||||||||||||||||| ||| ||||| || ||||| || ||||| | || || || Sbjct: 362 gccttcttctggttcttccgcttcaccctcccggcaggaccaccacccagagggctggtg 421 Query: 258 agtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattgacg 317 || |||||||| |||||||||| ||||| ||||| ||||| || ||||||| |||||| Sbjct: 422 agggagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacg 481 Query: 318 atctgcctgccaaccctnatgtggcg 343 | |||||| || ||||| |||||||| Sbjct: 482 agctgccttcccaccctgatgtggcg 507
>gb|AY106684.1| Zea mays PCO086432 mRNA sequence Length = 965 Score = 91.7 bits (46), Expect = 1e-15 Identities = 120/146 (82%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtc 257 ||||||||||||||||||| ||| ||||| || ||||| || ||||| | || || || Sbjct: 653 gccttcttctggttcttccgcttcacccttccggcaggaccaccacccagagggctggtg 594 Query: 258 agtgagaagtcaatgtgcttctnagattcaaccctcaccatnaatgaggggacattgacg 317 || |||||||| |||||||||| ||||| ||||| ||||| || ||||||| |||||| Sbjct: 593 agggagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacg 534 Query: 318 atctgcctgccaaccctnatgtggcg 343 | |||||| || ||||| |||||||| Sbjct: 533 agctgccttcccaccctgatgtggcg 508
>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene) Length = 939 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/101 (84%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 |||||||| |||||||| | |||||||||||||||||||| ||| ||||| || ||||| Sbjct: 595 ccaccgaagggacttgtaattgagaagtcaatgtgcttctgagagtcaactctaaccatg 536 Query: 300 aatgaggggacattgacgatctgcctgccaaccctnatgtg 340 || || || |||||||| | |||| | |||||||| ||||| Sbjct: 535 aaggaaggaacattgacaacctgctttccaacccttatgtg 495
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 79.8 bits (40), Expect = 5e-12 Identities = 85/101 (84%) Strand = Plus / Plus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 16949 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 17008 Query: 300 aatgaggggacattgacgatctgcctgccaaccctnatgtg 340 || || |||| || || | |||||| |||||||| ||||| Sbjct: 17009 aaggatgggatgttcacaacctgcctcccaaccctgatgtg 17049
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 73.8 bits (37), Expect = 3e-10 Identities = 80/95 (84%) Strand = Plus / Plus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 104687 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 104746 Query: 300 aatgaggggacattgacgatctgcctgccaaccct 334 || || |||| || || | |||||| |||||||| Sbjct: 104747 aaggatgggatgttcacaacctgcctcccaaccct 104781 Score = 67.9 bits (34), Expect = 2e-08 Identities = 77/92 (83%) Strand = Plus / Minus Query: 243 ccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaat 302 ||||| |||||||| ||||| |||||||||||||||| || |||||||||||||| || Sbjct: 100055 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 99996 Query: 303 gaggggacattgacgatctgcctgccaaccct 334 || |||| || || | |||||| |||||||| Sbjct: 99995 gatgggatgttcaccacctgcctcccaaccct 99964
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 71.9 bits (36), Expect = 1e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 54946 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccat 54888 Score = 67.9 bits (34), Expect = 2e-08 Identities = 77/92 (83%) Strand = Plus / Plus Query: 243 ccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaat 302 ||||| |||||||| ||||| |||||||||||||||| || |||||||||||||| || Sbjct: 62174 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 62233 Query: 303 gaggggacattgacgatctgcctgccaaccct 334 || |||| || || | |||||| |||||||| Sbjct: 62234 gatgggatgttcaccacctgcctcccaaccct 62265
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 67.9 bits (34), Expect = 2e-08 Identities = 77/92 (83%) Strand = Plus / Minus Query: 243 ccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatnaat 302 ||||| |||||||| ||||| |||||||||||||||| || |||||||||||||| || Sbjct: 55630 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 55571 Query: 303 gaggggacattgacgatctgcctgccaaccct 334 || |||| || || | |||||| |||||||| Sbjct: 55570 gatgggatgttcaccacctgcctcccaaccct 55539 Score = 58.0 bits (29), Expect = 2e-05 Identities = 78/95 (82%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||| || |||||||| || || |||||||||||||||| || |||||||||||||| Sbjct: 53183 ccaccaaagggacttgtgagggaaaagtcaatgtgcttctgtgaatcaaccctcaccatg 53124 Query: 300 aatgaggggacattgacgatctgcctgccaaccct 334 || || |||| || || | |||||| |||||||| Sbjct: 53123 aaggatgggatgttaacaacctgcctcccaaccct 53089
>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence Length = 963 Score = 56.0 bits (28), Expect = 8e-05 Identities = 82/101 (81%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||| || ||||| || || ||||| ||||||||||||| ||| || || |||||||| Sbjct: 581 ccaccaaaaggactggttagagagaaatcaatgtgcttctgagagtcgactctcaccatg 522 Query: 300 aatgaggggacattgacgatctgcctgccaaccctnatgtg 340 ||||| | ||||| |||| ||||| |||||||| ||||| Sbjct: 521 aatgaagcaacattcacgacttgccttccaaccctgatgtg 481
>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete sequence Length = 136150 Score = 54.0 bits (27), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||| || ||||| || || ||||||||||||||||||| ||| || || |||||||| Sbjct: 121292 ccaccaaaaggactggttagagagaagtcaatgtgcttctgagagtccactctcaccatg 121233 Query: 300 aatga 304 ||||| Sbjct: 121232 aatga 121228
>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA Length = 875 Score = 54.0 bits (27), Expect = 3e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccatn 299 ||||| || ||||| || || ||||||||||||||||||| ||| || || |||||||| Sbjct: 575 ccaccaaaaggactggttagagagaagtcaatgtgcttctgagagtccactctcaccatg 516 Query: 300 aatga 304 ||||| Sbjct: 515 aatga 511
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 54.0 bits (27), Expect = 3e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 253 ttgtcagtgagaagtcaatgtgcttctnagattcaaccctca 294 |||| |||||||||||||||||||| | ||| |||||||||| Sbjct: 131631 ttgttagtgagaagtcaatgtgctttttagactcaaccctca 131672
>gb|AY193430.1| Lactuca saligna genotype PI491204 40S ribosomal protein S9 gene, partial cds Length = 459 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY193429.1| Lactuca saligna genotype CGN9311 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY193428.1| Lactuca saligna genotype US93UC10 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY193427.1| Lactuca serriola genotype W66336A 40S ribosomal protein S9 gene, partial cds Length = 520 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgagtccaccctcaccat 136
>gb|AY193426.1| Lactuca sativa cultivar Mariska 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY193425.1| Lactuca sativa cultivar Calmar 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY193424.1| Lactuca sativa cultivar Diana 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/53 (86%) Strand = Plus / Plus Query: 246 aatggacttgtcagtgagaagtcaatgtgcttctnagattcaaccctcaccat 298 |||||||| || |||||||| ||||||||||||| || || ||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccat 136
>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds Length = 686 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 237 cctccaccgaatggacttgtcagtgagaagtcaatgtgctt 277 ||||||||||||||| | |||| ||||||||||||||||| Sbjct: 560 cctccaccgaatggagatttcagagagaagtcaatgtgctt 520
>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence Length = 891 Score = 48.1 bits (24), Expect = 0.019 Identities = 36/40 (90%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttct 279 |||||||| ||||| || || ||||||||||||||||||| Sbjct: 566 ccaccgaaaggactggtgagagagaagtcaatgtgcttct 527
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 ccagcgtcgccgccaccacattgcct 201 ||||||||||||||||| |||||||| Sbjct: 4694485 ccagcgtcgccgccaccgcattgcct 4694460
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 161 tcttcctcatcaccaccagcgtcgccgccaccac 194 ||||| |||||||||||| | ||||||||||||| Sbjct: 91879 tcttcatcatcaccaccatcatcgccgccaccac 91912
>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete sequence Length = 180316 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 146 ctagttcctcattcctcttcctcatc 171 ||||||||||||||||||||| |||| Sbjct: 16622 ctagttcctcattcctcttccccatc 16647
>dbj|AP004508.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036c, complete sequence Length = 22758 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 atcaccaccagcgtcgccgccaccac 194 |||||||||| ||||||||||||||| Sbjct: 142 atcaccaccaccgtcgccgccaccac 117
>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200 mRNA, complete cds Length = 885 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Minus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 587 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 528 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 527 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 486
>ref|XM_455020.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23749g predicted mRNA Length = 741 Score = 42.1 bits (21), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 gaagtcaatgtgcttctnagattc 286 ||||||||||||||||| |||||| Sbjct: 100 gaagtcaatgtgcttctcagattc 123
>ref|XM_455021.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23760g predicted mRNA Length = 567 Score = 42.1 bits (21), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gaagtcaatgtgcttctnagattc 286 ||||||||||||||||| |||||| Sbjct: 474 gaagtcaatgtgcttctcagattc 451
>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds Length = 597 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Minus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 540 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 481 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 480 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 439
>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds Length = 745 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Minus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 566 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 507 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 506 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 465
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 gaagtcaatgtgcttctnagattc 286 ||||||||||||||||| |||||| Sbjct: 2103822 gaagtcaatgtgcttctcagattc 2103845
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Plus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 39093 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 39152 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 39153 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 39194
>emb|BX829457.1|CNS0A1LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 551 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Minus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 328 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 269 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 268 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 227
>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/102 (79%) Strand = Plus / Minus Query: 203 cttctggttcttcctcttnaccctgcctgcagggcctccaccgaatggacttgtcagtga 262 ||||| |||| | ||||| || || |||| | |||| |||||||| ||||| || || | Sbjct: 580 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 521 Query: 263 gaagtcaatgtgcttctnagattcaaccctcaccatnaatga 304 |||||||||||||||| || |||| |||||||| ||||| Sbjct: 520 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 479
>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence Length = 236969 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ttcctcattcctcttcctcat 170 ||||||||||||||||||||| Sbjct: 140138 ttcctcattcctcttcctcat 140158
>ref|NM_102817.1| Arabidopsis thaliana unknown protein AT1G30800 mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tcctcttcctcatcaccacc 177 |||||||||||||||||||| Sbjct: 26 tcctcttcctcatcaccacc 45
>ref|XM_482539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3177 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1876 ctgcctgcagggcctccacc 1857
>ref|XM_474789.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3165 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1864 ctgcctgcagggcctccacc 1845
>ref|XM_471049.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3207 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1906 ctgcctgcagggcctccacc 1887
>ref|NM_195591.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0036B06.21), mRNA Length = 3138 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1936 ctgcctgcagggcctccacc 1917
>ref|NM_192483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3102 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1852 ctgcctgcagggcctccacc 1833
>ref|NM_193412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3165 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1864 ctgcctgcagggcctccacc 1845
>ref|XM_471296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1792 ctgcctgcagggcctccacc 1773
>ref|XM_471343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2466 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1906 ctgcctgcagggcctccacc 1887
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 36334 ctgcctgcagggcctccacc 36315
>gb|AY389956.1| Protopterus dolloi ribosomal protein S9 mRNA, partial cds Length = 523 Score = 40.1 bits (20), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 261 gagaagtcaatgtgcttctnaga 283 ||||||||||||||||||| ||| Sbjct: 447 gagaagtcaatgtgcttctgaga 425
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 accagcgtcgccgccaccac 194 |||||||||||||||||||| Sbjct: 1820111 accagcgtcgccgccaccac 1820092
>gb|AY453853.1| Bacteriophage phi1026b, complete genome Length = 54865 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 accagcgtcgccgccaccac 194 |||||||||||||||||||| Sbjct: 23119 accagcgtcgccgccaccac 23100
>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence Length = 212589 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 124851 caccaccaccgtcgccgccaccac 124874
>gb|BT012401.1| Arabidopsis thaliana At1g30800 mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tcctcttcctcatcaccacc 177 |||||||||||||||||||| Sbjct: 26 tcctcttcctcatcaccacc 45
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 caccagcgtcgccgccacca 193 |||||||||||||||||||| Sbjct: 374766 caccagcgtcgccgccacca 374747
>gb|BT011773.1| Arabidopsis thaliana At1g30800 mRNA, complete cds Length = 1177 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tcctcttcctcatcaccacc 177 |||||||||||||||||||| Sbjct: 98 tcctcttcctcatcaccacc 117
>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research Institute) complete sequence Length = 243051 Score = 40.1 bits (20), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 261 gagaagtcaatgtgcttctnaga 283 ||||||||||||||||||| ||| Sbjct: 188817 gagaagtcaatgtgcttctgaga 188839
>gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome 1, complete sequence Length = 184034 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gaaagtctcaggcctctcag 97 |||||||||||||||||||| Sbjct: 58592 gaaagtctcaggcctctcag 58611
>ref|XM_809245.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511445.90) partial mRNA Length = 1674 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ttgccttcttctggttcttc 215 |||||||||||||||||||| Sbjct: 182 ttgccttcttctggttcttc 163
>gb|BC060560.1| Rattus norvegicus cDNA clone MGC:72792 IMAGE:6922405, complete cds Length = 824 Score = 40.1 bits (20), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 261 gagaagtcaatgtgcttctnaga 283 ||||||||||||||||||| ||| Sbjct: 576 gagaagtcaatgtgcttctgaga 554
>gb|AF447491.1| Bacteriophage phiE125, complete genome Length = 53373 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 accagcgtcgccgccaccac 194 |||||||||||||||||||| Sbjct: 23858 accagcgtcgccgccaccac 23839
>gb|AY326266.1| Gallus gallus ATP-binding cassette sub-family A member 4 (ABCA4) gene, exon 48, intron 48 and partial cds Length = 995 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cctcttcctcatcaccacca 178 |||||||||||||||||||| Sbjct: 695 cctcttcctcatcaccacca 714
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 40.1 bits (20), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 261 gagaagtcaatgtgcttctnaga 283 ||||||||||||||||||| ||| Sbjct: 191306 gagaagtcaatgtgcttctgaga 191284
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 caccagcgtcgccgccacca 193 |||||||||||||||||||| Sbjct: 471488 caccagcgtcgccgccacca 471469
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 4854 ctgcctgcagggcctccacc 4873
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 107330 ctgcctgcagggcctccacc 107349
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 caccaccagcgtcgccgccaccac 194 ||||||||||||| |||||||||| Sbjct: 80359 caccaccagcgtcaccgccaccac 80336
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 caccaccagcgtcgccgccaccac 194 ||||||||||||| |||||||||| Sbjct: 335532 caccaccagcgtcaccgccaccac 335509
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 98609 ctgcctgcagggcctccacc 98590
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 123728 ctgcctgcagggcctccacc 123709
>emb|AL031644.1|SPCC613 S.pombe chromosome III cosmid c613 Length = 28999 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 attcctcttcctcatcacca 175 |||||||||||||||||||| Sbjct: 5935 attcctcttcctcatcacca 5916
>gb|AF447343.1| Nectarinia senegalensis cytochrome c oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; and ATP synthase 8 and ATP synthase 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 999 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 taaagcactcacaacaccaa 118 |||||||||||||||||||| Sbjct: 274 taaagcactcacaacaccaa 293
>gb|AY063741.1| Burkholderia thailandensis phiE125 attachment site Length = 8095 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 accagcgtcgccgccaccac 194 |||||||||||||||||||| Sbjct: 593 accagcgtcgccgccaccac 574
>emb|Z14085.1|NTRS4 N.tabacum mRNA for ribosomal protein S4 (partial) Length = 373 Score = 40.1 bits (20), Expect = 4.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 240 ccaccgaatggacttgtcagtgagaagtcaatgtgcttct 279 |||||||| ||||| | || ||||||||||||||||||| Sbjct: 145 ccaccgaaaggactgatgagagagaagtcaatgtgcttct 106
>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293, complete sequence Length = 113091 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 98587 caccaccaccgtcgccgccaccac 98564
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caccaccagcgtcgccgcca 190 |||||||||||||||||||| Sbjct: 1187233 caccaccagcgtcgccgcca 1187214
>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0036B06, from Chromosome 10, complete sequence Length = 148263 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 133076 ctgcctgcagggcctccacc 133057
>ref|NM_001022686.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC613.03), partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 attcctcttcctcatcacca 175 |||||||||||||||||||| Sbjct: 373 attcctcttcctcatcacca 354
>gb|DQ066325.1| Ixodes scapularis isolate IS-6-12L-111 40S ribosomal protein S9 mRNA, complete cds Length = 579 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tcagtgagaagtcaatgtgcttct 279 |||| ||||||||||||||||||| Sbjct: 481 tcagcgagaagtcaatgtgcttct 458
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 115750 ctgcctgcagggcctccacc 115769
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 10226492 ctgcctgcagggcctccacc 10226511 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 9588534 ctgcctgcagggcctccacc 9588515 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 6569480 ctgcctgcagggcctccacc 6569461 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1018890 ctgcctgcagggcctccacc 1018871
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 16832988 ctgcctgcagggcctccacc 16833007
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 7838182 ctgcctgcagggcctccacc 7838201
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 4461128 ctgcctgcagggcctccacc 4461109 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 2055368 ctgcctgcagggcctccacc 2055387 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 1814660 ctgcctgcagggcctccacc 1814641
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 20947958 ctgcctgcagggcctccacc 20947939 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 8747714 ctgcctgcagggcctccacc 8747733
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 24973403 ctgcctgcagggcctccacc 24973384 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 24271765 ctgcctgcagggcctccacc 24271746 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 19661456 ctgcctgcagggcctccacc 19661437
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 7905372 ctgcctgcagggcctccacc 7905353 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 2667537 ctgcctgcagggcctccacc 2667518
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 3838447 ctgcctgcagggcctccacc 3838428
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 34752937 ctgcctgcagggcctccacc 34752956 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 26909679 ctgcctgcagggcctccacc 26909660 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 26612893 ctgcctgcagggcctccacc 26612874 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 11927543 ctgcctgcagggcctccacc 11927562
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 26951258 ctgcctgcagggcctccacc 26951239 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 20689701 ctgcctgcagggcctccacc 20689720
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 82734 ctgcctgcagggcctccacc 82753
>emb|AL606630.3|OSJN00041 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046P18, complete sequence Length = 140780 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 97903 ctgcctgcagggcctccacc 97922
>emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017P10, complete sequence Length = 175563 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 50707 ctgcctgcagggcctccacc 50726
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 157035 ctgcctgcagggcctccacc 157016
>gb|AC097652.2| Homo sapiens BAC clone RP11-138B4 from 4, complete sequence Length = 114950 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ctcttcctcatcaccaccag 179 |||||||||||||||||||| Sbjct: 28444 ctcttcctcatcaccaccag 28425
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cctcttcctcatcaccacca 178 |||||||||||||||||||| Sbjct: 38204 cctcttcctcatcaccacca 38185
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 32659 ctgcctgcagggcctccacc 32678
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 151677 ctgcctgcagggcctccacc 151696
>gb|DQ108802.1| Arabidopsis thaliana clone 256155 mRNA sequence Length = 1292 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcctcttcctcatcaccacc 177 |||||||||||||||||||| Sbjct: 932 tcctcttcctcatcaccacc 913
>gb|AC128650.6| Homo sapiens 3 BAC RP11-373L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119990 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cctcttcctcatcaccacca 178 |||||||||||||||||||| Sbjct: 44227 cctcttcctcatcaccacca 44246
>ref|XM_575340.1| PREDICTED: Rattus norvegicus similar to ribosomal protein S9 (LOC499986), mRNA Length = 597 Score = 40.1 bits (20), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 261 gagaagtcaatgtgcttctnaga 283 ||||||||||||||||||| ||| Sbjct: 491 gagaagtcaatgtgcttctgaga 469
>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library) complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 123013 caccaccaccgtcgccgccaccac 122990
>gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana BAC T17H7 from Chromosome 1, complete sequence Length = 73805 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tcctcttcctcatcaccacc 177 |||||||||||||||||||| Sbjct: 17088 tcctcttcctcatcaccacc 17107
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 14133 ctgcctgcagggcctccacc 14114
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 25463 ctgcctgcagggcctccacc 25482
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 126259 ctgcctgcagggcctccacc 126240
>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445H04 Length = 202821 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 132903 ctgcctgcagggcctccacc 132884
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 90735 ctgcctgcagggcctccacc 90754
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 70785 ctgcctgcagggcctccacc 70804
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 10089 ctgcctgcagggcctccacc 10070
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 150407 ctgcctgcagggcctccacc 150388
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 122878 ctgcctgcagggcctccacc 122859
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 79284 ctgcctgcagggcctccacc 79265
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 12890 ctgcctgcagggcctccacc 12871
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 119754 ctgcctgcagggcctccacc 119735
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 155274 ctgcctgcagggcctccacc 155255
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 47054 ctgcctgcagggcctccacc 47035
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 4502 ctgcctgcagggcctccacc 4483
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 88222 ctgcctgcagggcctccacc 88203
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 4958 ctgcctgcagggcctccacc 4939
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 14083 ctgcctgcagggcctccacc 14064
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 100106 ctgcctgcagggcctccacc 100087
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 83316 ctgcctgcagggcctccacc 83297
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 33616 ctgcctgcagggcctccacc 33597
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 125316 ctgcctgcagggcctccacc 125335
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 53322 ctgcctgcagggcctccacc 53303
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0543C11 Length = 159075 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 24821 ctgcctgcagggcctccacc 24840
>emb|AL512597.11| Mouse DNA sequence from clone RP23-132G2 on chromosome X, complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ccacattgccttcttctggt 210 |||||||||||||||||||| Sbjct: 129178 ccacattgccttcttctggt 129159
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 90693 ctgcctgcagggcctccacc 90712
>emb|AJ341691.1|HSA341691 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BM16RS Length = 772 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcct 217 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ341475.1|HSA341475 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-DN12RS Length = 759 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcct 217 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ341863.1|HSA341863 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BC12RS Length = 769 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcct 217 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>gb|AC006056.2|AC006056 Mus musculus Yp BAC GSMB-368G7 (Genome Systems Mouse BAC Library) complete sequence Length = 52614 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 15782 caccaccaccgtcgccgccaccac 15805
>gb|BC082895.1| Xenopus laevis hypothetical LOC494780, mRNA (cDNA clone IMAGE:6951621), partial cds Length = 2055 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cattcctcttcctcatcacc 174 |||||||||||||||||||| Sbjct: 153 cattcctcttcctcatcacc 134
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cctcttcctcatcaccacca 178 |||||||||||||||||||| Sbjct: 41498 cctcttcctcatcaccacca 41517
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 7843281 ctgcctgcagggcctccacc 7843300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 16786221 ctgcctgcagggcctccacc 16786240
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09, complete sequence Length = 160462 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 70640 ctgcctgcagggcctccacc 70621
>emb|AL831804.5|CNS08CAH Oryza sativa chromosome 12, . BAC OSJNBb0027C15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115632 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 44870 ctgcctgcagggcctccacc 44889
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctgcctgcagggcctccacc 244 |||||||||||||||||||| Sbjct: 264994 ctgcctgcagggcctccacc 265013
>gb|AC148319.2| Mus musculus BAC clone RP24-540G19 from Y, complete sequence Length = 159680 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 152513 caccaccaccgtcgccgccaccac 152536
>emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chromosome 4, complete sequence Length = 210380 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gaatggacttgtcagtgaga 264 |||||||||||||||||||| Sbjct: 139658 gaatggacttgtcagtgaga 139677
>gb|BC108444.1| Xenopus laevis cDNA clone IMAGE:7980441, containing frame-shift errors Length = 2067 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cattcctcttcctcatcacc 174 |||||||||||||||||||| Sbjct: 182 cattcctcttcctcatcacc 163
>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658, complete sequence Length = 99089 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 47198 caccaccaccgtcgccgccaccac 47221
>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219, complete sequence Length = 72880 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 65779 caccaccaccgtcgccgccaccac 65802
>dbj|AP006118.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT47H13, TM0201, complete sequence Length = 79882 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 37056 caccaccaccgtcgccgccaccac 37079
>dbj|AP004913.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072a, complete sequence Length = 100740 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 caccaccagcgtcgccgccaccac 194 |||||||| ||||||||||||||| Sbjct: 66728 caccaccatcgtcgccgccaccac 66751 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ccaccagcgtcgccgccaccacat 196 |||||| ||||||||||||||||| Sbjct: 66558 ccaccatcgtcgccgccaccacat 66581
>emb|AJ342190.1|HSA342190 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-6AM7RS Length = 691 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcct 217 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ342181.1|HSA342181 Homo sapiens genomic sequence surrounding NotI site, clone HSJ6-AC2RS Length = 711 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccttcttctggttcttcct 217 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,308,448 Number of Sequences: 3902068 Number of extensions: 3308448 Number of successful extensions: 75096 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73635 Number of HSP's gapped (non-prelim): 1460 length of query: 344 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 322 effective length of database: 17,147,199,772 effective search space: 5521398326584 effective search space used: 5521398326584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
