ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23l12 |
|---|---|
| Clone Library Name | barley_pub |
>SOT1_SPIOL (Q41364) 2-oxoglutarate/malate translocator, chloroplast precursor| Length = 569 Score = 197 bits (500), Expect = 3e-50 Identities = 89/181 (49%), Positives = 121/181 (66%) Frame = -3 Query: 708 SVVAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 +V AA++GLS+LL+ GV+ W +CL E AWDTL WFA L+ MAG L G+++W S V Sbjct: 389 AVTAAILGLSVLLITGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLITWFSENVV 448 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALAL 349 KV+ LSW +FGVL YF+ HY FAS AH+GA+++AFL++ A G P L+A+ L Sbjct: 449 KVVGGLGLSWQMSFGVLVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFLAAIVL 508 Query: 348 TYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFLGL 169 ++ SNL G LTHY G + V+YGA YV LP + GF + +N +IW VG WWK +GL Sbjct: 509 SFLSNLMGGLTHYGIGSAPVFYGANYVPLPQWWGYGFLISIVNLIIWLGVGGLWWKAIGL 568 Query: 168 Y 166 + Sbjct: 569 W 569
>YFLS_BACSU (O34726) Putative malate transporter yflS| Length = 478 Score = 186 bits (473), Expect = 5e-47 Identities = 86/181 (47%), Positives = 122/181 (67%) Frame = -3 Query: 708 SVVAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 + A+IGL++LLL V+ WDD E+ AWDTL WFA LV +A L LG+VSW SN + Sbjct: 300 ATTTALIGLAVLLLSQVLTWDDIKKEQGAWDTLTWFAALVMLANFLNELGMVSWFSNAMK 359 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALAL 349 + FS W AF +L Y++ HY FAS TAH+ A+YSAFLA+ +AAG P +L+AL+L Sbjct: 360 SSVSGFS--WIVAFIILIVVYYYSHYFFASATAHISAMYSAFLAVVVAAGAPPLLAALSL 417 Query: 348 TYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFLGL 169 + SNLFG+ THY SG + V++GAGY+ + +GF + ++ ++W V+G WWK LG+ Sbjct: 418 AFISNLFGSTTHYGSGAAPVFFGAGYIPQGKWWSIGFILSIVHIIVWLVIGGLWWKVLGI 477 Query: 168 Y 166 + Sbjct: 478 W 478
>Y020_HAEIN (Q57048) Hypothetical protein HI0020| Length = 479 Score = 114 bits (286), Expect = 2e-25 Identities = 58/178 (32%), Positives = 94/178 (52%) Frame = -3 Query: 708 SVVAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 + + A+I + + ++L ++ WDD L K AW+TL W+ ++GM+G L G W++N ++ Sbjct: 297 ATIVAIIVMVLCIVLSIVTWDDILKSKGAWNTLVWYGGIIGMSGLLEKSGFFKWLANTLS 356 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALAL 349 +LQ A +L S + YLFAS A+V A+ F + G P L AL L Sbjct: 357 TILQFEGHGMMALIVILTLSVS-VRYLFASGGAYVAAMVPVFATVGHVTGAPTELLALGL 415 Query: 348 TYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFL 175 + ++ G++THY G + +GAGY D+ + G A + +I +G WWK L Sbjct: 416 VFANSYGGSVTHYGGGPGPIAFGAGYNDIKSWWITGAIIAFGSLIIHLTIGMAWWKLL 473
>YBHI_ECOLI (P75763) Inner membrane protein ybhI| Length = 477 Score = 104 bits (260), Expect = 2e-22 Identities = 50/174 (28%), Positives = 93/174 (53%) Frame = -3 Query: 696 AMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVAKVLQ 517 A++ ++ +LLLG++ W+D + K W+TL W+ ++G++ L+ + W++ V K Sbjct: 299 AIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAE-VFKNNL 357 Query: 516 SFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALALTYNS 337 +F AF V+ + Y FAS +A++ A+ F + +G P +L+ALAL +++ Sbjct: 358 AFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSN 417 Query: 336 NLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFL 175 + G +THY V +G GY D+ + +G + L+ +G +WW L Sbjct: 418 SYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNML 471
>TTDT_ECOLI (P39414) Putative tartrate carrier (Tartrate transporter)| (Tartrate/succinate antiporter) Length = 487 Score = 99.8 bits (247), Expect = 7e-21 Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Frame = -3 Query: 699 AAMIGLSI---LLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 AAM+G S+ +LLL +++WDD ++ K+AW+ W A L+ +A L N G +SW +A Sbjct: 309 AAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLA 368 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLA-AGVPAILSALA 352 L +S + L ++ + Y FAS TA+ AL +A LA +P + L Sbjct: 369 GSLSGYSPT--MVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLM 426 Query: 351 LTYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFW 187 + L LT Y++G S +YYG+GY+ D ++LG I ++ + G W Sbjct: 427 VGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLW 481
>CITT_ECOLI (P0AE74) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 97.1 bits (240), Expect = 5e-20 Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 1/182 (0%) Frame = -3 Query: 708 SVVAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 + ++ +S++L L V+ W D SAW+TL A LV MA LT G + W + ++ Sbjct: 310 ATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMS 369 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLA-AGVPAILSALA 352 L+ FS + A VL ++F HYLFAS +AH + LA+ GVP + Sbjct: 370 THLEGFSPN--ATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCIL 427 Query: 351 LTYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFLG 172 L + + G LT Y++G + YG GYV D ++LG I + +VG W L Sbjct: 428 LVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG---WPILA 484 Query: 171 LY 166 ++ Sbjct: 485 MW 486
>CITT_ECO57 (P0AE75) Citrate carrier (Citrate transporter) (Citrate/succinate| antiporter) Length = 487 Score = 97.1 bits (240), Expect = 5e-20 Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 1/182 (0%) Frame = -3 Query: 708 SVVAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVA 529 + ++ +S++L L V+ W D SAW+TL A LV MA LT G + W + ++ Sbjct: 310 ATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMS 369 Query: 528 KVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLA-AGVPAILSALA 352 L+ FS + A VL ++F HYLFAS +AH + LA+ GVP + Sbjct: 370 THLEGFSPN--ATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCIL 427 Query: 351 LTYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWKFLG 172 L + + G LT Y++G + YG GYV D ++LG I + +VG W L Sbjct: 428 LVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVG---WPILA 484 Query: 171 LY 166 ++ Sbjct: 485 MW 486
>MEMP_RALEU (Q07252) Membrane protein| Length = 513 Score = 48.1 bits (113), Expect = 3e-05 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 4/183 (2%) Frame = -3 Query: 708 SVVAAMIGLSILLL--LGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNC 535 + +GL IL++ +GVM+W + +++ W TL F + + + L + W+ Sbjct: 331 TATVTFVGLVILMMPRIGVMDWKT-MQQRTPWGTLIVFGVGISLGTALLSTNAGQWLGQF 389 Query: 534 VAKVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAM--HLAAGVPAILS 361 V + F +L A IH FAS TA AL +A+ L + + Sbjct: 390 VVTHSGLAAHGALLVFAILSAFLILIHLGFASATALTAALLPILIAVLQTLPGDINRVGM 449 Query: 360 ALALTYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWK 181 + L + + FG + ++ Q+ V G + ++G I + + +W+ Sbjct: 450 TMLLGFTVS-FGFILPINAPQNMVCLGTETFNGRQFARIGIPVTIIGYAMMLLFAATYWR 508 Query: 180 FLG 172 +LG Sbjct: 509 WLG 511
>Y608_HAEIN (Q57486) Hypothetical protein HI0608| Length = 461 Score = 45.8 bits (107), Expect = 1e-04 Identities = 36/175 (20%), Positives = 79/175 (45%), Gaps = 2/175 (1%) Frame = -3 Query: 702 VAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVAKV 523 + A++ ++ GV +W + + W L F + ++ L + G +++ + + Sbjct: 292 IVALLAAIVICSTGVASWKQ-IQSNTDWGVLMLFGGGLTLSAVLKDSGASKILADSIVFM 350 Query: 522 L--QSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALAL 349 + Q F L G+L A++ F S TA L F+++ + G+P I AL + Sbjct: 351 IDGQHFYL-----IGLLVAAFIIFLTEFTSNTASAALLVPIFISIAQSLGMPEIGLALII 405 Query: 348 TYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAAINALIWGVVGTFWW 184 ++ L ++ +A+ +G+G V ++ K+GF + ++ +G +W Sbjct: 406 GIGASCAFMLP-VATPPNAIVFGSGQVKQSEMVKVGFLLNLVCVVVIATMGYMFW 459
>TOP1_MYCPN (P78032) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 711 Score = 33.1 bits (74), Expect = 0.86 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 11/90 (12%) Frame = +1 Query: 40 PLIIHFTKHLRRKMRSLRMVSHIGLSGALKNNFHQLTPEKPSI---KPQEFPPKC----- 195 PL+ +TK K +G S +++ + KP++ K +E P+C Sbjct: 630 PLLYRYTKRGNEKF--------VGCSNFPNCKYNEFSQNKPNLTLEKLEELCPECNSQLV 681 Query: 196 ---TNYSPNQSINRCCCKPQLEYIRKVNIS 276 T ++PN++ C P+ YI+K N S Sbjct: 682 KRRTKFNPNKTFVGCSNFPRCRYIKKDNAS 711
>YKS7_YEAST (P34231) Protein YKL187C| Length = 750 Score = 33.1 bits (74), Expect = 0.86 Identities = 23/94 (24%), Positives = 44/94 (46%) Frame = -3 Query: 462 FIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALALTYNSNLFGALTHYSSGQSAVYY 283 FI L+ ++ L+ LA+H+ GV +L+A+ ++ + SG + Y Sbjct: 562 FIILLYFNRYMFKQPLWLIALALHVCVGVATVLAAIIISV------MIAIIKSGTADDKY 615 Query: 282 GAGYVDLPDVFKLGFTAAAINALIWGVVGTFWWK 181 G + P L +TA A++ + G++ WW+ Sbjct: 616 GVVFKAGPAYTGLIWTAFALSFIATGLIIYTWWR 649
>EXPR_XANCP (P23314) Extracellular protease precursor (EC 3.4.21.-)| Length = 580 Score = 33.1 bits (74), Expect = 0.86 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -3 Query: 405 FLAMHLAAGVPAILSALALTYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAAA 226 + A AG+PA S+ T+ + A+T+ ++G + YGA V + + K G + + Sbjct: 220 YAANECGAGIPAASSSWHGTHVAGTVAAVTNNTTGVAGTAYGAKVVPVRVLGKCGGSLSD 279 Query: 225 I-NALIWGVVGT 193 I +A++W GT Sbjct: 280 IADAIVWASGGT 291
>Y2685_MYCTU (O07187) Hypothetical protein Rv2685/MT2759| Length = 428 Score = 32.3 bits (72), Expect = 1.5 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 702 VAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVAKV 523 + A++G +L+ + D L+ WDTL +FA L M G L G+V ++ ++ Sbjct: 250 LVALLGAGVLVRFSGLERSDYLSSVE-WDTLLFFAGLFVMVGALVKTGVVEQLARAATEL 308
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 535 CCKGSSVFLIELACSIWCSSGLLFLYS-----LSICKPNCTCWSSILGVSCHAPSSWCSC 371 CC+ SS + L C C S S S C+ +C C +S + + C SS +C Sbjct: 230 CCRPSSS--VSLLCHPVCRSTCCVPVSSCCAPTSSCQSSCCCPASCVSLLCRPASSRLAC 287 Query: 370 YTL 362 Y+L Sbjct: 288 YSL 290
>Y2703_MYCBO (P0A607) Hypothetical protein Mb2703| Length = 429 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = -3 Query: 702 VAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVAKV 523 + A++G +L+++ + + L+ WDTL +FA L M G L G+V+ ++ ++ Sbjct: 250 LVALLGAGMLIVVSGLTRSEYLSSVE-WDTLLFFAGLFIMVGALVKTGVVNDLARAATQL 308
>Y2684_MYCTU (P0A606) Hypothetical protein Rv2684/MT2758| Length = 429 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = -3 Query: 702 VAAMIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVSWMSNCVAKV 523 + A++G +L+++ + + L+ WDTL +FA L M G L G+V+ ++ ++ Sbjct: 250 LVALLGAGMLIVVSGLTRSEYLSSVE-WDTLLFFAGLFIMVGALVKTGVVNDLARAATQL 308
>HXB4_CHICK (P14840) Homeobox protein Hox-B4 (Chox-Z)| Length = 245 Score = 30.8 bits (68), Expect = 4.3 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = +1 Query: 109 GLSGALKNNFHQLTPEKPSIKPQEFPPKCTNYSPNQSINRCCCKPQLEY--IRKVNISS 279 GL L H P PS PP C+ S NQS + CK + Y ++KV++S+ Sbjct: 87 GLQSHLSEPNHPCEPGTPSP-----PPSCSQNSLNQSPSNSSCKEPVVYPWMKKVHVST 140
>G168_PARPR (P17053) G surface protein, allelic form 168 precursor| Length = 2704 Score = 30.4 bits (67), Expect = 5.6 Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 3/108 (2%) Frame = -2 Query: 628 VCVGHLSLVCYSSGNGRAAH*PRDCIVDVKLCCKGSSVFLIELACSIWCSSGLLFLYSLS 449 +C +LS SG G + C + AC + + S Sbjct: 371 LCTSYLSTCTVKSGGG----------CQNRSCANAPTTMTTNDACEAYLTGNNCITKSGG 420 Query: 448 ICKPNCTCWSSILGVSCHAPSSWCSCY---TLSTCSDVQFKSLWSTNT 314 C N TC + L +C SS +C+ S+C D + +TNT Sbjct: 421 GCVTNTTCAAITLEAACVKNSSGSTCFWDTASSSCKDKTCVNAPATNT 468
>G156_PARPR (P13837) G surface protein, allelic form 156 precursor| Length = 2715 Score = 30.4 bits (67), Expect = 5.6 Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 3/108 (2%) Frame = -2 Query: 628 VCVGHLSLVCYSSGNGRAAH*PRDCIVDVKLCCKGSSVFLIELACSIWCSSGLLFLYSLS 449 +C +LS SG G + C + AC + + S Sbjct: 377 LCTSYLSTCTVKSGGG----------CQNRTCANAPTTMTTNDACEAYFTGNNCITKSGG 426 Query: 448 ICKPNCTCWSSILGVSCHAPSSWCSCY---TLSTCSDVQFKSLWSTNT 314 C N TC + L +C SS +C+ S+C D + +TNT Sbjct: 427 GCVTNTTCAAITLEAACVKNSSGSTCFWDTASSSCKDKTCVNAPATNT 474
>PCP2_RALSO (Q8XT56) Pyrrolidone-carboxylate peptidase 2 (EC 3.4.19.3)| (5-oxoprolyl-peptidase 2) (Pyroglutamyl-peptidase I 2) (PGP-I 2) (Pyrase 2) Length = 215 Score = 30.0 bits (66), Expect = 7.3 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -3 Query: 387 AAGVPAILSALALTYNSN-LFGALTHYSSGQSAVYYGAGYVDLP 259 AAGVPA +S A TYN N LF L H+ + ++ G G++ +P Sbjct: 127 AAGVPAAVSQSAGTYNCNHLFYGLMHHIATRAPRMRG-GFIHVP 169
>MRAY_DESDG (Q313Q6) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 358 Score = 29.6 bits (65), Expect = 9.5 Identities = 47/195 (24%), Positives = 75/195 (38%), Gaps = 25/195 (12%) Frame = -3 Query: 693 MIGLSILLLLGVMNWDDCLNEKSAWDTLAWFAILV----GMAGQL---------TNLGIV 553 +IG S L++ V+ W D N W +LV G+ G L TN G+ Sbjct: 77 LIGFS--LIISVLLWGDLTN------VYLWLVMLVFTGFGLVGFLDDYTKLRRKTNQGLT 128 Query: 552 S-----WMSNCVAKVLQSFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHL 388 + W +A V F + PA VL +F + +G Y F + L Sbjct: 129 ARSKFLWQM-VIAAVAMYFLVKEPAYSTVLSFPFF------KNLQPDLGWFYIPFAMIVL 181 Query: 387 AAGVPAI-----LSALAL--TYNSNLFGALTHYSSGQSAVYYGAGYVDLPDVFKLGFTAA 229 + + LA+ T + + ++ Y +G S + AGY+ +P V +G Sbjct: 182 VGSSNGVNLTDGMDGLAIGPTVVAGIVFSIFIYIAGHSQI---AGYLQVPYVPGMGEVTV 238 Query: 228 AINALIWGVVGTFWW 184 ALI +G W+ Sbjct: 239 FCGALIGAGLGFLWF 253
>PTFBC_XANCP (P23355) PTS system fructose-specific EIIBC component (EIIBC-Fru)| (EII-Fru) [Includes: Fructose-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system fructose-specific EIIB component); Fructose permease IIC component (PTS Length = 580 Score = 29.6 bits (65), Expect = 9.5 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Frame = -3 Query: 516 SFSLSWPAAFGVLQASYFFIHYLFASQTAHVGALYSAFLAMHLAAGVPAILSALA--LTY 343 SF L + A G+L A F + ++A AH G L + + AG ++ ALA + Y Sbjct: 252 SFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAY 311 Query: 342 N-SNLFGALTHYSSGQSAVYYGAGYV-DLPDVFKLGFTAAAINALI 211 + ++ G G A AG++ + F G+ AA+N I Sbjct: 312 SIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYI 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,746,739 Number of Sequences: 219361 Number of extensions: 2396151 Number of successful extensions: 6146 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6134 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
