ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB210809.1| Ciona intestinalis mRNA for zinc finger protein,... 753 0.0
2dbj|AK222301.1| Ciona intestinalis cDNA, clone:ciad089e23, full ... 737 0.0
3emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chr... 50 0.007
4gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's ... 46 0.11
5gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, comp... 46 0.11
6gb|AC115393.5| Rattus norvegicus BAC CH230-103E13 (Children's H... 46 0.11
7gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cance... 46 0.11
8gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, compl... 46 0.11
9gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, co... 44 0.43
10gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosom... 44 0.43
11gb|AC158155.4| Mus musculus chromosome 3, clone RP23-167L9, comp... 44 0.43
12gb|AC121141.12| Mus musculus chromosome 17, clone RP23-430A11, c... 44 0.43
13gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome... 44 0.43
14gb|AC129700.8| Rattus norvegicus 4 BAC CH230-10L17 (Children's H... 44 0.43
15gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosom... 44 0.43
16gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, co... 44 0.43
17gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hos... 44 0.43
18gb|AC129288.3| Mus musculus BAC clone RP24-481M4 from chromosome... 44 0.43
19gb|AC144671.3| Mus musculus BAC clone RP24-292O2 from chromosome... 44 0.43
20gb|AC146876.3| Rattus norvegicus strain Brown Norway clone CH230... 44 0.43
21gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome... 44 0.43
22emb|CT025613.9| Mouse DNA sequence from clone RP23-208M16 on chr... 44 0.43
23gb|AC115288.4| Mus musculus BAC clone RP23-47P24 from 9, complet... 44 0.43
24gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, com... 44 0.43
25gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's H... 44 0.43
26emb|AL662900.12| Mouse DNA sequence from clone RP23-413L24 on ch... 44 0.43
27gb|AC008014.5| Homo sapiens 12 BAC RPCI11-66E20 (Roswell Park Ca... 44 0.43
28gb|AC113280.12| Mus musculus chromosome 1, clone RP23-391E12, co... 44 0.43
29gb|AC128031.4| Rattus norvegicus BAC CH230-418E23 (Children's H... 44 0.43
30emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on ch... 44 0.43
31gb|AC159246.2| Mus musculus BAC clone RP24-266N21 from chromosom... 44 0.43
32gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome... 44 0.43
33gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, co... 44 0.43
34gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, co... 44 0.43
35gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone ... 44 0.43
36emb|BX546464.10| Mouse DNA sequence from clone RP24-113P16 on ch... 44 0.43
37gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 44 0.43
38gb|AC155843.6| Mus musculus 6 BAC RP24-89H23 (Roswell Park Cance... 44 0.43
39gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome... 44 0.43
40gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosom... 44 0.43
41gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome... 44 0.43
42gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Pa... 44 0.43
43gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Sy... 44 0.43
44gb|AC155324.4| Mus musculus 10 BAC RP24-143N7 (Roswell Park Canc... 44 0.43
45gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, compl... 44 0.43
46gb|AC108791.9| Mus musculus chromosome 1, clone RP24-292D18, com... 44 0.43
47emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chr... 44 0.43
48gb|AC113329.7| Mus musculus chromosome 16, clone RP23-460L9, com... 44 0.43
49gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, co... 44 0.43
50emb|AL928949.12| Mouse DNA sequence from clone RP23-226K16 on ch... 44 0.43
51emb|BX005136.8| Mouse DNA sequence from clone RP23-449C14 on chr... 44 0.43
52emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on ch... 44 0.43
53emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chro... 44 0.43
54gb|AC134436.4| Mus musculus BAC clone RP24-439M12 from 13, compl... 44 0.43
55gb|AC151975.1| Mus musculus BAC clone RP24-423F11 from 8, comple... 44 0.43
56gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complet... 44 0.43
57emb|AL928912.10| Mouse DNA sequence from clone RP23-209L8 on chr... 44 0.43
58gb|AC120840.31| Mus musculus chromosome 19, clone RP24-539E24, c... 44 0.43
59emb|AL807826.4| Mouse DNA sequence from clone RP23-437O10 on chr... 44 0.43
60emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on ch... 44 0.43
61emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chro... 44 0.43
62emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromo... 44 0.43
63emb|AL808024.4| Mouse DNA sequence from clone RP23-144L10 on chr... 44 0.43
64gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome... 44 0.43
65gb|AC165235.11| Mus musculus chromosome 8, clone RP23-332G19, co... 44 0.43
66gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, com... 42 1.7
67gb|AC099607.6| Mus musculus chromosome 5, clone RP23-361G20, com... 42 1.7
68gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosom... 42 1.7
69gb|AC106374.6| Rattus norvegicus 4 BAC CH230-112C2 (Children's H... 42 1.7
70gb|AC094900.9| Rattus norvegicus 4 BAC CH230-6J7 (Children's Hos... 42 1.7
71gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, co... 42 1.7
72gb|AC147269.3| Mus musculus BAC clone RP24-281E6 from chromosome... 42 1.7
73emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on ch... 42 1.7
74gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosom... 42 1.7
75gb|AC122338.2| Mus musculus BAC clone RP23-353I2 from chromosome... 42 1.7
76gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosom... 42 1.7
77gb|AC117200.3| Mus musculus BAC clone RP23-164N7 from 3, complet... 42 1.7
78gb|AC163326.2| Mus musculus chromosome 5, clone RP24-295J8, comp... 42 1.7
79gb|AC095532.8| Rattus norvegicus 18 BAC CH230-8E4 (Children's Ho... 42 1.7
80gb|AC166259.3| Mus musculus BAC RP23-360A24 (Roswell Park Cance... 42 1.7
81emb|AL078630.1|MM573K1 Mouse DNA sequence from clone CT7-BM573K1... 42 1.7
82emb|AL627346.14| Mouse DNA sequence from clone RP23-313I9 on chr... 42 1.7
83emb|CR932807.1| Mus musculus chromosome 2, clone ResGen-172B22 s... 42 1.7
84emb|CR932800.1| Mus musculus chromosome 2, clone ResGen-169L23 s... 42 1.7
85gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome... 42 1.7
86gb|AC073938.11|AC073938 Mus musculus 18 BAC RP23-292H1 (Roswell ... 42 1.7
87gb|AC096374.7| Rattus norvegicus BAC CH230-17K7 (Children's Hos... 42 1.7
88gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, com... 42 1.7
89gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosom... 42 1.7
90gb|AC154629.2| Mus musculus BAC clone RP23-313M15 from chromosom... 42 1.7
91gb|AC020967.2|AC020967 Mus musculus chromosome 18 clone RP23-161... 42 1.7
92gb|AC153520.3| Mus musculus 10 BAC RP23-144O19 (Roswell Park Can... 42 1.7
93gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, co... 42 1.7
94gb|AC106334.8| Rattus norvegicus BAC CH230-185M3 (Children's Ho... 42 1.7
95emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chr... 42 1.7
96emb|AL928877.6| Mouse DNA sequence from clone RP23-52D18 on chro... 42 1.7
97emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chr... 42 1.7
98emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chr... 42 1.7
99gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, co... 40 6.7
100gb|AC165356.5| Mus musculus BAC clone RP23-142E18 from chromosom... 40 6.7
101gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome... 40 6.7
102gb|AC132881.10| Mus musculus chromosome 14, clone RP24-246K16, c... 40 6.7
103gb|AC125105.3| Mus musculus BAC clone RP24-220B7 from chromosome... 40 6.7
104gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, c... 40 6.7
105gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, co... 40 6.7
106gb|AC135640.5| Mus musculus BAC clone RP23-362A12 from chromosom... 40 6.7
107gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome... 40 6.7
108gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome ... 40 6.7
109gb|AC117211.3| Mus musculus BAC clone RP23-287M3 from 3, complet... 40 6.7
110emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on ch... 40 6.7
111emb|AL021330.1|HS244F1 Human DNA sequence from clone RP1-244F1 o... 40 6.7
112gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's ... 40 6.7
113gb|AC158749.5| Mus musculus chromosome 7, clone RP23-285C18, com... 40 6.7
114emb|AL669912.7| Mouse DNA sequence from clone RP23-147K24 on chr... 40 6.7
115emb|BX255911.8| Zebrafish DNA sequence from clone DKEY-274C14 in... 40 6.7
116gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.7
117emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chr... 40 6.7
118gb|AC133651.4| Mus musculus BAC clone RP24-239C15 from 1, comple... 40 6.7
119gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, compl... 40 6.7
120gb|AC158530.2| Mus musculus BAC clone RP23-255H12 from chromosom... 40 6.7 
>dbj|AB210809.1| Ciona intestinalis mRNA for zinc finger protein, partial cds, clone:
            cigd040o21
          Length = 1644

 Score =  753 bits (380), Expect = 0.0
 Identities = 384/386 (99%)
 Strand = Plus / Minus

                                                                        
Query: 108  acttcacttcctcagttaaatcatctgtgatcttcgattgataacgaaactccccggcaa 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 acttcacttcctcagttaaatcatctgtgatcttcgattgataacgaaactccccggcaa 1478

                                                                        
Query: 168  tgtcgtttaacgcctcgcacaatattgcttcatgtttctctccatcaagtttcgaacgca 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 tgtcgtttaacgcctcgcacaatattgcttcatgtttctctccatcaagtttcgaacgca 1418

                                                                        
Query: 228  aataatcgaattgctccttagtcgagtagtaaatcacctcatactctccctcaacaataa 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 aataatcgaattgctccttagtcgagtagtaaatcacctcatactctccctcaacaataa 1358

                                                                        
Query: 288  gtctcctcgcangaaaccaatacttccgtccattcctatcaacccccactggttcatgtc 347
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 gtctcctcgcaagaaaccaatacttccgtccattcctatcaacccccactggttcatgtc 1298

                                                                        
Query: 348  gtaaatattgcccgttcacctccatgtcctgctcacagttcaccacaccattcaacttgt 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 gtaaatattgcccgttcacctccatgtcctgctcacagttcaccacaccattcaacttgt 1238

                                                                        
Query: 408  gcgcaacgcaaacctcgcactgccattcatcatcgggtacctnttgcaaaggtgggttac 467
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1237 gcgcaacgcaaacctcgcactgccattcatcatcgggtacctcttgcaaaggtgggttac 1178

                                      
Query: 468  aacaagcgagatgataaacagcaggg 493
            ||||||||||||||||||||||||||
Sbjct: 1177 aacaagcgagatgataaacagcaggg 1152



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                       
Query: 52   catttgtctcacattatctttcataagttccaagcangtcctt 94
            |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1593 catttgtctcacattatctttcataagttccaagcaagtcctt 1551
to top
>dbj|AK222301.1| Ciona intestinalis cDNA, clone:ciad089e23, full insert sequence
          Length = 1683

 Score =  737 bits (372), Expect = 0.0
 Identities = 382/386 (98%)
 Strand = Plus / Minus

                                                                        
Query: 108  acttcacttcctcagttaaatcatctgtgatcttcgattgataacgaaactccccggcaa 167
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1520 acttcacttcctcagttaaatcatctgtgatctttgattgataacgaaactccccggcaa 1461

                                                                        
Query: 168  tgtcgtttaacgcctcgcacaatattgcttcatgtttctctccatcaagtttcgaacgca 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 tgtcgtttaacgcctcgcacaatattgcttcatgtttctctccatcaagtttcgaacgca 1401

                                                                        
Query: 228  aataatcgaattgctccttagtcgagtagtaaatcacctcatactctccctcaacaataa 287
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1400 aataatcgaattgctccttagtcgagtagtaaatcaccccatactctccctcaacaataa 1341

                                                                        
Query: 288  gtctcctcgcangaaaccaatacttccgtccattcctatcaacccccactggttcatgtc 347
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gtctcctcgcaagaaaccaatacttccgtccattcctatcaacccccactggttcatgtc 1281

                                                                        
Query: 348  gtaaatattgcccgttcacctccatgtcctgctcacagttcaccacaccattcaacttgt 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gtaaatattgcccgttcacctccatgtcctgctcacagttcaccacaccattcaacttgt 1221

                                                                        
Query: 408  gcgcaacgcaaacctcgcactgccattcatcatcgggtacctnttgcaaaggtgggttac 467
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1220 gcgcaacgcaaacctcgcactgccattcatcatcgggtacctcttgcaaaggtgggttac 1161

                                      
Query: 468  aacaagcgagatgataaacagcaggg 493
            ||||||||||||||||||||||||||
Sbjct: 1160 aacaagcgagatgataaacagcaggg 1135



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                       
Query: 52   catttgtctcacattatctttcataagttccaagcangtcctt 94
            |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1576 catttgtctcacattatctttcataagttccaagcaagtcctt 1534
to top
>emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chromosome X, complete
             sequence
          Length = 164991

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||||||||||||||||| |||||
Sbjct: 90689 attgcttcatgtttctctccatctagttt 90661



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 19842 attgcttcaagtttctctccatgaagttt 19814
to top
>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 232401

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 190    tattgcttcatgtttctctccat 212
              |||||||||||||||||||||||
Sbjct: 167223 tattgcttcatgtttctctccat 167245
to top
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 190    tattgcttcatgtttctctccat 212
              |||||||||||||||||||||||
Sbjct: 115209 tattgcttcatgtttctctccat 115187
to top
>gb|AC115393.5| Rattus norvegicus  BAC CH230-103E13 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 243316

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 190    tattgcttcatgtttctctccat 212
              |||||||||||||||||||||||
Sbjct: 208424 tattgcttcatgtttctctccat 208446
to top
>gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221540

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 190    tattgcttcatgtttctctccat 212
              |||||||||||||||||||||||
Sbjct: 210459 tattgcttcatgtttctctccat 210481
to top
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence
          Length = 223894

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 364    cacctccatgtcctgctcacagt 386
              |||||||||||||||||||||||
Sbjct: 137510 cacctccatgtcctgctcacagt 137488
to top
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence
          Length = 194425

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 68296 attgcttcatgtttctctccat 68275
to top
>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence
          Length = 216271

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 56456 attgcttcatgtttctctccat 56435
to top
>gb|AC158155.4| Mus musculus chromosome 3, clone RP23-167L9, complete sequence
          Length = 205345

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 163847 attgcttcatgtttctctccat 163868
to top
>gb|AC121141.12| Mus musculus chromosome 17, clone RP23-430A11, complete sequence
          Length = 182218

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 191  attgcttcatgtttctctccat 212
            ||||||||||||||||||||||
Sbjct: 6113 attgcttcatgtttctctccat 6092
to top
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence
          Length = 166756

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 96392 attgcttcatgtttctctccat 96413
to top
>gb|AC129700.8| Rattus norvegicus 4 BAC CH230-10L17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238527

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 109336 attgcttcatgtttctctccat 109315
to top
>gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosome 16, complete sequence
          Length = 193398

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 107270 attgcttcatgtttctctccat 107249
to top
>gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, complete sequence
          Length = 160759

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 99506 attgcttcatgtttctctccat 99527
to top
>gb|AC095825.6| Rattus norvegicus 4 BAC CH230-9J6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 234084

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 142021 attgcttcatgtttctctccat 142042
to top
>gb|AC129288.3| Mus musculus BAC clone RP24-481M4 from chromosome 1, complete sequence
          Length = 179082

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 13350 attgcttcatgtttctctccat 13371
to top
>gb|AC144671.3| Mus musculus BAC clone RP24-292O2 from chromosome 9, complete sequence
          Length = 153253

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 47951 attgcttcatgtttctctccat 47930
to top
>gb|AC146876.3| Rattus norvegicus strain Brown Norway clone CH230-418B13, complete
             sequence
          Length = 106685

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 37198 attgcttcatgtttctctccat 37177
to top
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence
          Length = 159158

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 76559 attgcttcatgtttctctccat 76580
to top
>emb|CT025613.9| Mouse DNA sequence from clone RP23-208M16 on chromosome 13, complete
              sequence
          Length = 166222

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 122310 attgcttcatgtttctctccat 122331
to top
>gb|AC115288.4| Mus musculus BAC clone RP23-47P24 from 9, complete sequence
          Length = 244423

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 232029 attgcttcatgtttctctccat 232008
to top
>gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, complete sequence
          Length = 145303

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 23280 attgcttcatgtttctctccat 23259
to top
>gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 141084

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 99701 attgcttcatgtttctctccat 99680
to top
>emb|AL662900.12| Mouse DNA sequence from clone RP23-413L24 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 190156

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 83567 attgcttcatgtttctctccat 83588
to top
>gb|AC008014.5| Homo sapiens 12 BAC RPCI11-66E20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167939

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 185   cacaatattgcttcatgtttct 206
             ||||||||||||||||||||||
Sbjct: 89059 cacaatattgcttcatgtttct 89038
to top
>gb|AC113280.12| Mus musculus chromosome 1, clone RP23-391E12, complete sequence
          Length = 217982

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 144898 attgcttcatgtttctctccat 144919
to top
>gb|AC128031.4| Rattus norvegicus  BAC CH230-418E23 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 176784

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 109599 attgcttcatgtttctctccat 109620
to top
>emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on chromosome 4, complete
              sequence
          Length = 159305

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 147692 attgcttcatgtttctctccat 147671
to top
>gb|AC159246.2| Mus musculus BAC clone RP24-266N21 from chromosome 9, complete sequence
          Length = 147269

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 10606 attgcttcatgtttctctccat 10627
to top
>gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome 1, complete sequence
          Length = 199753

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 176184 attgcttcatgtttctctccat 176205
to top
>gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, complete sequence
          Length = 195979

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 183760 attgcttcatgtttctctccat 183739
to top
>gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, complete sequence
          Length = 196455

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 69997 attgcttcatgtttctctccat 70018
to top
>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete
              sequence
          Length = 203901

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 147647 attgcttcatgtttctctccat 147668



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 97634 attgcttcatgtttctctccat 97655
to top
>emb|BX546464.10| Mouse DNA sequence from clone RP24-113P16 on chromosome 2, complete
             sequence
          Length = 70059

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 21534 attgcttcatgtttctctccat 21513
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 191     attgcttcatgtttctctccat 212
               ||||||||||||||||||||||
Sbjct: 1818636 attgcttcatgtttctctccat 1818615
to top
>gb|AC155843.6| Mus musculus 6 BAC RP24-89H23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 210908

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 133064 attgcttcatgtttctctccat 133085
to top
>gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome 13, complete sequence
          Length = 179176

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 107516 attgcttcatgtttctctccat 107495
to top
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete
             sequence
          Length = 194306

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 88305 attgcttcatgtttctctccat 88284
to top
>gb|AC140334.3| Mus musculus BAC clone RP23-244J7 from chromosome 6, complete sequence
          Length = 192598

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 101569 attgcttcatgtttctctccat 101590
to top
>gb|AC069019.8|AC069019 Mus musculus  BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 196175

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 76666 attgcttcatgtttctctccat 76645
to top
>gb|AC069018.17|AC069018 Mus musculus  BAC MGS3-563C15 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 157665

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 19143 attgcttcatgtttctctccat 19164
to top
>gb|AC155324.4| Mus musculus 10 BAC RP24-143N7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179677

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 142023 attgcttcatgtttctctccat 142044
to top
>gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, complete sequence
          Length = 233984

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 205549 attgcttcatgtttctctccat 205528
to top
>gb|AC108791.9| Mus musculus chromosome 1, clone RP24-292D18, complete sequence
          Length = 162007

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 83468 attgcttcatgtttctctccat 83447
to top
>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete
             sequence
          Length = 211901

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 26057 attgcttcatgtttctctccat 26078
to top
>gb|AC113329.7| Mus musculus chromosome 16, clone RP23-460L9, complete sequence
          Length = 176766

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 132863 attgcttcatgtttctctccat 132842
to top
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence
          Length = 210643

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 187725 attgcttcatgtttctctccat 187746
to top
>emb|AL928949.12| Mouse DNA sequence from clone RP23-226K16 on chromosome 2, complete
              sequence
          Length = 200500

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 105215 attgcttcatgtttctctccat 105236
to top
>emb|BX005136.8| Mouse DNA sequence from clone RP23-449C14 on chromosome 2, complete
             sequence
          Length = 178200

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 16518 attgcttcatgtttctctccat 16497
to top
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete
             sequence
          Length = 178273

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 31609 attgcttcatgtttctctccat 31588
to top
>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete
              sequence
          Length = 182810

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 138432 attgcttcatgtttctctccat 138453
to top
>gb|AC134436.4| Mus musculus BAC clone RP24-439M12 from 13, complete sequence
          Length = 128990

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 94335 attgcttcatgtttctctccat 94314
to top
>gb|AC151975.1| Mus musculus BAC clone RP24-423F11 from 8, complete sequence
          Length = 198686

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 50050 attgcttcatgtttctctccat 50071
to top
>gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complete sequence
          Length = 196473

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 191  attgcttcatgtttctctccat 212
            ||||||||||||||||||||||
Sbjct: 5369 attgcttcatgtttctctccat 5348
to top
>emb|AL928912.10| Mouse DNA sequence from clone RP23-209L8 on chromosome 2, complete
              sequence
          Length = 136821

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 131415 attgcttcatgtttctctccat 131436
to top
>gb|AC120840.31| Mus musculus chromosome 19, clone RP24-539E24, complete sequence
          Length = 189283

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 22782 attgcttcatgtttctctccat 22761
to top
>emb|AL807826.4| Mouse DNA sequence from clone RP23-437O10 on chromosome 4, complete
            sequence
          Length = 92315

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 191  attgcttcatgtttctctccat 212
            ||||||||||||||||||||||
Sbjct: 5429 attgcttcatgtttctctccat 5408
to top
>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete
              sequence
          Length = 216706

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 176310 attgcttcatgtttctctccat 176289
to top
>emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chromosome 4, complete
             sequence
          Length = 200266

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 30337 attgcttcatgtttctctccat 30358
to top
>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete
             sequence
          Length = 212009

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 27672 attgcttcatgtttctctccat 27693
to top
>emb|AL808024.4| Mouse DNA sequence from clone RP23-144L10 on chromosome X, complete
              sequence
          Length = 186528

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 184314 attgcttcatgtttctctccat 184335
to top
>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence
          Length = 206555

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 191    attgcttcatgtttctctccat 212
              ||||||||||||||||||||||
Sbjct: 129903 attgcttcatgtttctctccat 129882
to top
>gb|AC165235.11| Mus musculus chromosome 8, clone RP23-332G19, complete sequence
          Length = 220008

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   attgcttcatgtttctctccat 212
             ||||||||||||||||||||||
Sbjct: 22496 attgcttcatgtttctctccat 22517
to top
>gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, complete sequence
          Length = 230988

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   attgcttcatgtttctctcca 211
             |||||||||||||||||||||
Sbjct: 26939 attgcttcatgtttctctcca 26919
to top
>gb|AC099607.6| Mus musculus chromosome 5, clone RP23-361G20, complete sequence
          Length = 204179

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    ttgcttcatgtttctctccat 212
              |||||||||||||||||||||
Sbjct: 190608 ttgcttcatgtttctctccat 190588
to top
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete
             sequence
          Length = 143851

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 374   tcctgctcacagttcaccacaccattcaa 402
             |||| ||||||||||||| ||||||||||
Sbjct: 53555 tcctcctcacagttcaccccaccattcaa 53583
to top
>gb|AC106374.6| Rattus norvegicus 4 BAC CH230-112C2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 163448

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 88875 attgcttcaagtttctctccattaagttt 88903
to top
>gb|AC094900.9| Rattus norvegicus 4 BAC CH230-6J7 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 79001

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 66607 attgcttcaagtttctctccattaagttt 66579
to top
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence
          Length = 228842

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 191  attgcttcatgtttctctccatcaagttt 219
            ||||||||| |||||||||||| ||||||
Sbjct: 7861 attgcttcaagtttctctccattaagttt 7889
to top
>gb|AC147269.3| Mus musculus BAC clone RP24-281E6 from chromosome 18, complete
            sequence
          Length = 177277

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 192  ttgcttcatgtttctctccat 212
            |||||||||||||||||||||
Sbjct: 7082 ttgcttcatgtttctctccat 7062
to top
>emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on chromosome 17, complete
             sequence
          Length = 188926

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 81934 attgcttcaagtttctctccattaagttt 81906
to top
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence
          Length = 195587

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   attgcttcatgtttctctcca 211
             |||||||||||||||||||||
Sbjct: 46168 attgcttcatgtttctctcca 46148
to top
>gb|AC122338.2| Mus musculus BAC clone RP23-353I2 from chromosome 6, complete sequence
          Length = 181128

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||| ||| |||||||||||||||||||
Sbjct: 127449 attgcatcaagtttctctccatcaagttt 127477
to top
>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete
             sequence
          Length = 197720

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 374   tcctgctcacagttcaccacaccattcaa 402
             |||| ||||||||||||| ||||||||||
Sbjct: 35650 tcctcctcacagttcaccccaccattcaa 35622
to top
>gb|AC117200.3| Mus musculus BAC clone RP23-164N7 from 3, complete sequence
          Length = 220758

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| ||||||||||||| |||||
Sbjct: 173191 attgcttcaagtttctctccatctagttt 173163
to top
>gb|AC163326.2| Mus musculus chromosome 5, clone RP24-295J8, complete sequence
          Length = 158802

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   ttgcttcatgtttctctccat 212
             |||||||||||||||||||||
Sbjct: 53549 ttgcttcatgtttctctccat 53529
to top
>gb|AC095532.8| Rattus norvegicus 18 BAC CH230-8E4 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 10110 attgcttcaagtttctctccattaagttt 10138
to top
>gb|AC166259.3| Mus musculus  BAC RP23-360A24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 198972

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 57286 attgcttcaagtttctctccattaagttt 57258
to top
>emb|AL078630.1|MM573K1 Mouse DNA sequence from clone CT7-BM573K1 on chromosome 17 Contains the
              gene for gamma-aminobutyric acid (GABA) B receptor 1, five
              genes for novel 7 transmembrane receptor (rhodopsin family)
              (olfactory receptor LIKE) proteins, the gene for a novel
              Ulp1 protease family member, a Ulp1 protease family
              pseudogene, a novel pseudogene, a Von Hippel-Lindau disease
              tumor suppressor (VHL) pseudogene, a 7 transmembrane
              receptor (rhodopsin family) (olfactory receptor LIKE)
              pseudogene, the gene for diubiquitin and three CpG islands,
              complete sequence
          Length = 154614

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| |||||||||||| ||||||
Sbjct: 101542 attgcttcaagtttctctccattaagttt 101514
to top
>emb|AL627346.14| Mouse DNA sequence from clone RP23-313I9 on chromosome 11, complete
             sequence
          Length = 100292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 38072 attgcttcaagtttctctccattaagttt 38044
to top
>emb|CR932807.1| Mus musculus chromosome 2, clone ResGen-172B22 strain 129/Sv, complete
              sequence
          Length = 138840

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| |||||||||||| ||||||
Sbjct: 120287 attgcttcaagtttctctccattaagttt 120259
to top
>emb|CR932800.1| Mus musculus chromosome 2, clone ResGen-169L23 strain 129/Sv,
            complete sequence
          Length = 124093

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 191  attgcttcatgtttctctccatcaagttt 219
            ||||||||| |||||||||||| ||||||
Sbjct: 7858 attgcttcaagtttctctccattaagttt 7830
to top
>gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome 13, complete sequence
          Length = 204778

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 60061 attgcttcaagtttctctccattaagttt 60033
to top
>gb|AC073938.11|AC073938 Mus musculus 18 BAC RP23-292H1 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 205547

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| |||||||||||| ||||||
Sbjct: 127218 attgcttcaagtttctctccattaagttt 127246
to top
>gb|AC096374.7| Rattus norvegicus  BAC CH230-17K7 (Children's Hospital Oakland Research
             Institute Rat (BN/SsNHsd/MCW) BAC library) complete
             sequence
          Length = 239221

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   ttgcttcatgtttctctccat 212
             |||||||||||||||||||||
Sbjct: 88511 ttgcttcatgtttctctccat 88491
to top
>gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, complete sequence
          Length = 215079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| ||||||||||||| |||||
Sbjct: 186516 attgcttcaagtttctctccatctagttt 186488
to top
>gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosome 16, complete
            sequence
          Length = 192526

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 191  attgcttcatgtttctctccatcaagttt 219
            ||||||||| ||||||||||||| |||||
Sbjct: 3519 attgcttcaagtttctctccatctagttt 3547
to top
>gb|AC154629.2| Mus musculus BAC clone RP23-313M15 from chromosome 16, complete sequence
          Length = 147288

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| ||||||||||||| |||||
Sbjct: 120297 attgcttcaagtttctctccatctagttt 120325
to top
>gb|AC020967.2|AC020967 Mus musculus chromosome 18 clone RP23-161O8, complete sequence
          Length = 225883

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 191    attgcttcatgtttctctccatcaagttt 219
              ||||||||| |||||||||||| ||||||
Sbjct: 159401 attgcttcaagtttctctccattaagttt 159429
to top
>gb|AC153520.3| Mus musculus 10 BAC RP23-144O19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207519

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 68176 attgcttcaagtttctctccattaagttt 68204
to top
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence
          Length = 337658

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 191  attgcttcatgtttctctccatcaagttt 219
            ||||||||| ||||||||||||| |||||
Sbjct: 2515 attgcttcaagtttctctccatctagttt 2487
to top
>gb|AC106334.8| Rattus norvegicus  BAC CH230-185M3 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 206745

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 191   attgcttcatgtttctctcca 211
             |||||||||||||||||||||
Sbjct: 65946 attgcttcatgtttctctcca 65966
to top
>emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chromosome 4, complete
             sequence
          Length = 197911

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 188   aatattgcttcatgtttctctccat 212
             |||||||||||| ||||||||||||
Sbjct: 21831 aatattgcttcaagtttctctccat 21807
to top
>emb|AL928877.6| Mouse DNA sequence from clone RP23-52D18 on chromosome 2, complete
             sequence
          Length = 201120

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| |||||||||||| ||||||
Sbjct: 94450 attgcttcaagtttctctccattaagttt 94422
to top
>emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chromosome 11, complete
             sequence
          Length = 214811

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| ||||||||||||| |||||
Sbjct: 74088 attgcttcaggtttctctccatctagttt 74060
to top
>emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chromosome 2, complete
             sequence
          Length = 164288

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 191   attgcttcatgtttctctccatcaagttt 219
             ||||||||| ||||||||||||| |||||
Sbjct: 51808 attgcttcaagtttctctccatctagttt 51836
to top
>gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, complete sequence
          Length = 166435

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgcttcatgtttctctccat 212
              ||||||||||||||||||||
Sbjct: 145608 tgcttcatgtttctctccat 145627
to top
>gb|AC165356.5| Mus musculus BAC clone RP23-142E18 from chromosome 7, complete
            sequence
          Length = 207936

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  atattgcttcatgtttctctccat 212
            ||||||||||| ||||||||||||
Sbjct: 3978 atattgcttcaagtttctctccat 3955
to top
>gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome 16, complete sequence
          Length = 138498

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 191   attgcttcatgtttctctccatcaagtt 218
             ||||||||| |||||||||||| |||||
Sbjct: 19217 attgcttcaagtttctctccattaagtt 19190
to top
>gb|AC132881.10| Mus musculus chromosome 14, clone RP24-246K16, complete sequence
          Length = 181352

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    atattgcttcatgtttctctccat 212
              ||||||||||| ||||||||||||
Sbjct: 126583 atattgcttcaagtttctctccat 126606
to top
>gb|AC125105.3| Mus musculus BAC clone RP24-220B7 from chromosome 16, complete sequence
          Length = 153616

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgcttcatgtttctctccat 212
              ||||||||||||||||||||
Sbjct: 153053 tgcttcatgtttctctccat 153072
to top
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence
          Length = 238123

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 189  atattgcttcatgtttctctccat 212
            ||||||||||| ||||||||||||
Sbjct: 3028 atattgcttcaagtttctctccat 3051
to top
>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence
          Length = 264062

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgcttcatgtttctctccat 212
             ||||||||||||||||||||
Sbjct: 30850 tgcttcatgtttctctccat 30831
to top
>gb|AC135640.5| Mus musculus BAC clone RP23-362A12 from chromosome 7, complete sequence
          Length = 205974

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    atattgcttcatgtttctctccat 212
              ||||||||||| ||||||||||||
Sbjct: 190949 atattgcttcaagtttctctccat 190926
to top
>gb|AC123871.4| Mus musculus BAC clone RP23-247L8 from chromosome 7, complete sequence
          Length = 184312

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   atattgcttcatgtttctctccat 212
             ||||||||||| ||||||||||||
Sbjct: 33495 atattgcttcaagtttctctccat 33472
to top
>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence
          Length = 236342

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 193  tgcttcatgtttctctccat 212
            ||||||||||||||||||||
Sbjct: 7589 tgcttcatgtttctctccat 7570
to top
>gb|AC117211.3| Mus musculus BAC clone RP23-287M3 from 3, complete sequence
          Length = 206579

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgcttcatgtttctctccat 212
             ||||||||||||||||||||
Sbjct: 45279 tgcttcatgtttctctccat 45298
to top
>emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on chromosome 13, complete
              sequence
          Length = 200059

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     tctcacattatctttcataa 77
              ||||||||||||||||||||
Sbjct: 171142 tctcacattatctttcataa 171161
to top
>emb|AL021330.1|HS244F1 Human DNA sequence from clone RP1-244F1 on chromosome 6q16.1-16.3
            Contains a nucleophosmin (nucleolar phosphoprotein B23,
            numatrin) (NPM1) (B23, NPM) pseudogene and a novel
            pseudogene, complete sequence
          Length = 84621

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  cacaatattgcttcatgttt 204
            ||||||||||||||||||||
Sbjct: 7081 cacaatattgcttcatgttt 7100
to top
>gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 235343

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgcttcatgtttctctccat 212
             ||||||||||||||||||||
Sbjct: 81154 tgcttcatgtttctctccat 81135
to top
>gb|AC158749.5| Mus musculus chromosome 7, clone RP23-285C18, complete sequence
          Length = 237364

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    gcttcatgtttctctccatc 213
              ||||||||||||||||||||
Sbjct: 234592 gcttcatgtttctctccatc 234573
to top
>emb|AL669912.7| Mouse DNA sequence from clone RP23-147K24 on chromosome 11 Contains a
             serine/threonine kinase 16 (Stk16) pseudogene pseudogene,
             complete sequence
          Length = 174954

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgcttcatgtttctctccat 212
             ||||||||||||||||||||
Sbjct: 75660 tgcttcatgtttctctccat 75679
to top
>emb|BX255911.8| Zebrafish DNA sequence from clone DKEY-274C14 in linkage group 20,
             complete sequence
          Length = 206480

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cacaatattgcttcatgttt 204
             ||||||||||||||||||||
Sbjct: 26951 cacaatattgcttcatgttt 26970
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     gcaaacctcgcactgccatt 434
               ||||||||||||||||||||
Sbjct: 5793390 gcaaacctcgcactgccatt 5793409
to top
>emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chromosome 16, complete
              sequence
          Length = 193062

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 191    attgcttcatgtttctctccatcaagtt 218
              ||||||||| |||||||||||| |||||
Sbjct: 187506 attgcttcaagtttctctccattaagtt 187479
to top
>gb|AC133651.4| Mus musculus BAC clone RP24-239C15 from 1, complete sequence
          Length = 178756

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tgcttcatgtttctctccat 212
             ||||||||||||||||||||
Sbjct: 65406 tgcttcatgtttctctccat 65425
to top
>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence
          Length = 197813

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    tgcttcatgtttctctccat 212
              ||||||||||||||||||||
Sbjct: 161393 tgcttcatgtttctctccat 161374
to top
>gb|AC158530.2| Mus musculus BAC clone RP23-255H12 from chromosome 17, complete
             sequence
          Length = 154287

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   attgcttcatgtttctctcc 210
             ||||||||||||||||||||
Sbjct: 17889 attgcttcatgtttctctcc 17870


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,733,156
Number of Sequences: 3902068
Number of extensions: 2733156
Number of successful extensions: 50131
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49778
Number of HSP's gapped (non-prelim): 353
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top