ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24a08 |
|---|---|
| Clone Library Name | barley_pub |
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 42.0 bits (97), Expect = 0.001 Identities = 29/120 (24%), Positives = 37/120 (30%) Frame = +1 Query: 118 HMDGSDQ*HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXX 297 H D HH H +H HH H H D H H H+ AH Sbjct: 251 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH-------------- 296 Query: 298 XXXXXXXXXNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 +D HD HH+ H + H H H H H+ + H H+ Sbjct: 297 ----HHHHHHDAHHHHHHHDAHH--HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 350 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/112 (22%), Positives = 34/112 (30%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H HH H H D H H H+ AH Sbjct: 239 HHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH---------------------- 276 Query: 322 XNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 H + HH+ H + +H H H+ H H+ H H+ Sbjct: 277 ---------HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHH 319 Score = 37.4 bits (85), Expect = 0.025 Identities = 24/112 (21%), Positives = 34/112 (30%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H HH H H H H H+ H Sbjct: 199 HHHHAPHHHHHHHHAPHHHHHHHHGHHHH-HHHHHGHHHHHHHHHGHHHHHHHHHDAHHH 257 Query: 322 XNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 + A H + HH+ H + +H H H+ H H+ H H+ Sbjct: 258 HHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH 309 Score = 37.0 bits (84), Expect = 0.033 Identities = 23/103 (22%), Positives = 31/103 (30%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H HH H H D H H H+ AH Sbjct: 249 HHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHH 308 Query: 322 XNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHY 450 + + H + HH+ H + H H H H H+ Sbjct: 309 HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHH 351 Score = 35.4 bits (80), Expect = 0.095 Identities = 24/114 (21%), Positives = 31/114 (27%), Gaps = 2/114 (1%) Frame = +1 Query: 142 HHRHCCYHS--LP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXX 315 HH H YH P HH H H H H H+ Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHH------------------------ 197 Query: 316 XXXNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 H + HH+ H + H H H+ H H+ H H+ Sbjct: 198 ------------HHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHH 239 Score = 34.3 bits (77), Expect = 0.21 Identities = 25/120 (20%), Positives = 36/120 (30%) Frame = +1 Query: 118 HMDGSDQ*HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXX 297 H ++ HH H H P H H H H H H+ H Sbjct: 141 HHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHH--HHHHHHAPHHHH 198 Query: 298 XXXXXXXXXNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 + A H + HH+ H ++ H H H+ H H+ H H+ Sbjct: 199 HHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHH 258 Score = 33.9 bits (76), Expect = 0.28 Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 2/114 (1%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H HH H H + H H H+ AH Sbjct: 111 HHHHLGHH----HHHHHAAHHHHHEEHHH--HHHAAHH--------HHHEEHHHHHHAAH 156 Query: 322 XNDWSRATIL--HDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 + W L H + HH+ H H H H+ H H+ + H H+ Sbjct: 157 HHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHH 210 Score = 33.9 bits (76), Expect = 0.28 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 1/121 (0%) Frame = +1 Query: 118 HMDGSDQ*HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXX 297 H ++ HH H H P HH H H H H H+ H Sbjct: 70 HEPHHEEHHHHHPEEHHEP-HHEEHHHHHPHPHHHHH---HHPPHH-------------- 111 Query: 298 XXXXXXXXXNDWSRATILHDNLQMLHHNQHSPYYSH-QEHKHYCSCREHKHYCSCQEHKH 474 H +L HH+ H+ ++ H +EH H+ H H+ +EH H Sbjct: 112 ------------------HHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHH---EEHHH 150 Query: 475 Y 477 + Sbjct: 151 H 151 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/112 (20%), Positives = 34/112 (30%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H HH H H H H + H+ H Sbjct: 120 HHHHAAHHH---HHEEHHHHH-HAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPH 175 Query: 322 XNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 + H + HH+ H + H H H+ + H H+ H H+ Sbjct: 176 HH--------HHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHH 219 Score = 32.3 bits (72), Expect = 0.80 Identities = 10/37 (27%), Positives = 17/37 (45%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 HH +H ++ H H H+ H H+ H H+ + Sbjct: 89 HHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAA 125 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/42 (33%), Positives = 16/42 (38%) Frame = +1 Query: 118 HMDGSDQ*HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN 243 H D HH H +H HH H H D H H H+ Sbjct: 310 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHH 351
>SOX15_HUMAN (O60248) SOX-15 protein (SOX-20 protein) (SOX-12 protein)| Length = 233 Score = 38.5 bits (88), Expect = 0.011 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -3 Query: 511 STGFGTRPGSYSSAYVPGSYSSAY 440 S GFG RP SYS+AY+PGSY S++ Sbjct: 158 SRGFGYRPPSYSTAYLPGSYGSSH 181 Score = 34.7 bits (78), Expect = 0.16 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -3 Query: 505 GFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 413 G+ T S Y P SYS+AY+PGSY S++ Sbjct: 151 GYATTQPSRGFGYRPPSYSTAYLPGSYGSSH 181
>SOX15_MOUSE (P43267) SOX-15 protein| Length = 231 Score = 36.6 bits (83), Expect = 0.042 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = -3 Query: 505 GFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 413 G+ T GS Y P +YS+AY+PGSY+S++ Sbjct: 149 GYTTTQGSRGFGYQPPNYSTAYLPGSYTSSH 179 Score = 36.2 bits (82), Expect = 0.055 Identities = 14/24 (58%), Positives = 21/24 (87%) Frame = -3 Query: 511 STGFGTRPGSYSSAYVPGSYSSAY 440 S GFG +P +YS+AY+PGSY+S++ Sbjct: 156 SRGFGYQPPNYSTAYLPGSYTSSH 179
>S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute carrier family| 39 member 6) (Endoplamic reticulum membrane-linked protein) (Ermelin) Length = 765 Score = 34.3 bits (77), Expect = 0.21 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = +1 Query: 337 RATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHY 477 R I HD+ H HS + H +H+H+ H + +H+H+ Sbjct: 90 RVHIHHDHEHHADHEHHSDHEHHSDHEHHSDHEHHSDHEHHSDHEHH 136 Score = 30.8 bits (68), Expect = 2.3 Identities = 9/34 (26%), Positives = 17/34 (50%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKH 474 HH+ H + H+ H + +H+H+ + H H Sbjct: 105 HHSDHEHHSDHEHHSDHEHHSDHEHHSDHEHHSH 138
>LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp| Length = 657 Score = 32.0 bits (71), Expect = 1.0 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 340 ATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQE 465 AT LH Q L H Q Y HQ+ +H+HY Q+ Sbjct: 173 ATTLHQQQQQLQHQQQQQYQQHQQQLQQ-QQHQHQHYLQQQQ 213
>FAU_DROME (Q9VGX3) Protein anoxia up-regulated| Length = 619 Score = 31.2 bits (69), Expect = 1.8 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = -3 Query: 481 YSSAYVPGSYSSAYVPGSYSSAYVP 407 YS +Y+P +Y+S Y+P SY++ Y P Sbjct: 110 YSPSYLPSTYTSTYIPTSYTT-YTP 133 Score = 28.9 bits (63), Expect = 8.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 484 SYSSAYVPGSYSSAYVPGSYSSAYVPGDYS 395 +YS YS +Y+P +Y+S Y+P Y+ Sbjct: 100 TYSYTTPSTYYSPSYLPSTYTSTYIPTSYT 129
>S39A6_HUMAN (Q13433) Zinc transporter SLC39A6 precursor (Solute carrier family| 39 member 6) (Estrogen-regulated protein LIV-1) Length = 749 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 337 RATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 R I HD+ H HS + H +H+H+ +H+H+ +H H S Sbjct: 89 RIHIHHDHDHHSDHEHHSDHERHSDHEHH---SDHEHH---SDHNHAAS 131
>DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) (ACAT-related gene product 1) Length = 488 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -1 Query: 447 VLMFPAATVVLMFLVTIVGAMLVMMEH 367 +L FPAA V+L+ +T VG++L +M H Sbjct: 175 ILCFPAAVVLLVESITPVGSLLALMAH 201
>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)| Length = 332 Score = 30.0 bits (66), Expect = 4.0 Identities = 24/114 (21%), Positives = 36/114 (31%) Frame = +1 Query: 142 HHRHCCYHSLP*HHRVHPRQT*H*DRHWHLKSHN*AHS*TXXXXXXXXXXXXXXXXXXXX 321 HH H +H+ HH H H H +H+ H+ Sbjct: 67 HHAHHAHHAADAHHAHHAADAHH--AHHAADAHHAHHA-----ADAHHAHHAADAHHAHH 119 Query: 322 XNDWSRATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 D A D HH H+ + H H+ + H H+ + H H+ S Sbjct: 120 AADAHHAHHAAD----AHHAHHA---ADAHHAHHAADAHHAHHAAYAHHAHHAS 166 Score = 30.0 bits (66), Expect = 4.0 Identities = 9/37 (24%), Positives = 18/37 (48%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 HH H+ + + H H+ + H H+ + H H+ + Sbjct: 67 HHAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAA 103 Score = 30.0 bits (66), Expect = 4.0 Identities = 10/37 (27%), Positives = 16/37 (43%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 HH H H H H+ + H H+ + H H+ + Sbjct: 58 HHAHHVADAHHAHHAHHAADAHHAHHAADAHHAHHAA 94
>S39A6_PONPY (Q5R9M9) Zinc transporter SLC39A6 precursor (Solute carrier family| 39 member 6) Length = 743 Score = 29.6 bits (65), Expect = 5.2 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = +1 Query: 337 RATILHDNLQMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCSC 486 R I HD+ H HS + H +H+H+ H+++ + ++K C Sbjct: 89 RIHIHHDHEHHSDHEHHSDHEHHSDHEHH----SHRNHAASGKNKRKALC 134
>CHD8_HUMAN (Q9HCK8) Chromodomain-helicase-DNA-binding protein 8 (EC 3.6.1.-)| (ATP-dependent helicase CHD8) (CHD-8) (Helicase with SNF2 domain 1) Length = 2302 Score = 29.6 bits (65), Expect = 5.2 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 Query: 355 DNLQMLHHNQHSPYYSHQEHKH 420 D+ MLHH+ H P+ H H H Sbjct: 2208 DSSTMLHHHHHHPHPHHHHHHH 2229
>NIFB_AZOVI (P11067) FeMo cofactor biosynthesis protein nifB| Length = 502 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Frame = +1 Query: 352 HDNLQMLHHN-----QHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCSCQA*CQNQS 510 HD L L N Q+ P YS + H HY + +C HYC+ + C N+S Sbjct: 28 HDQLSHLPENIRAKVQNHPCYSEEAH-HYFARMHVAVAPACNIQCHYCNRKYDCANES 84
>HRP3_PLAFS (P14586) Histidine-rich protein| Length = 82 Score = 29.6 bits (65), Expect = 5.2 Identities = 10/32 (31%), Positives = 14/32 (43%) Frame = +1 Query: 352 HDNLQMLHHNQHSPYYSHQEHKHYCSCREHKH 447 H HH H Y+ H H+H+ H+H Sbjct: 7 HHYFHRHHHLNHHLYHRHHHHRHHHHRHHHRH 38
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 29.6 bits (65), Expect = 5.2 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +2 Query: 374 IITSIAPTIVTRNISTTVAAGNISTTVAARNISTTVAARPSAKTS 508 +I +PT T TT + ++TT +A +T+ ARP+++++ Sbjct: 714 VIPEASPTTTTSAPVTTTTSAPVTTTTSAPVTTTSTTARPTSRST 758
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 5.2 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +1 Query: 364 QMLHHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKH 474 Q H QH Q+ +H+ + H+H Q+H+H Sbjct: 199 QQQHQQQHHQQQQQQQQQHHQQQQHHQHSQPQQQHQH 235
>NFASC_RAT (P97685) Neurofascin precursor| Length = 1240 Score = 29.6 bits (65), Expect = 5.2 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +2 Query: 386 IAPTIVTRNISTTVAAGNISTTVAARNISTTVAARPSAKT 505 I PT+V ++TT+A +TT AA +TT + P+ T Sbjct: 962 IIPTVVPTTVATTIA--TTTTTTAAATTTTTTESPPTTTT 999
>LEG3_CRILO (P47953) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) (CBP30) Length = 244 Score = 29.6 bits (65), Expect = 5.2 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -3 Query: 490 PGSYSSAYVPGSYSSAYVPGSYSSAYVPGDY 398 PG+Y PG+Y PG+Y PG Y Sbjct: 40 PGAYPGQAPPGAYPGQAPPGAYPGPTAPGAY 70 Score = 29.3 bits (64), Expect = 6.8 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 502 FGTRPGS--YSSAYVPGSYSSAYVPGSYSSAYVPGDY 398 +G +PG+ Y A PG+Y PG+Y PG Y Sbjct: 25 WGNQPGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAY 61
>CNTP1_HUMAN (P78357) Contactin-associated protein 1 precursor (Caspr) (Caspr1)| (Neurexin 4) (Neurexin IV) (p190) Length = 1384 Score = 29.3 bits (64), Expect = 6.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 Query: 490 PGSYSSAYVPGSYSSAYVPGSYSSAYVPGDYSR 392 PG Y Y+PG + YVPG + Y DY R Sbjct: 1033 PG-YEPGYIPGYDTPGYVPGYHGPGYRLPDYPR 1064
>SCR24_ARATH (P82643) Hypothetical protein SCRL24 precursor| Length = 89 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 8/33 (24%) Frame = +1 Query: 394 YYSHQEHKHYCSC--------REHKHYCSCQEH 468 Y + Q K + SC ++KHYC CQ H Sbjct: 51 YMTDQSKKKFLSCTCNNVVMLHKYKHYCECQSH 83
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 29.3 bits (64), Expect = 6.8 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHY 423 HHN H P++ H H H+ Sbjct: 38 HHNSHHPHHHHHHHHHH 54
>HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide| Length = 59 Score = 29.3 bits (64), Expect = 6.8 Identities = 10/34 (29%), Positives = 15/34 (44%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKH 474 HH H Y+ + H H+ S + CS + H Sbjct: 15 HHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHH 48 Score = 29.3 bits (64), Expect = 6.8 Identities = 11/36 (30%), Positives = 15/36 (41%) Frame = +1 Query: 376 HNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 H H ++ H H HY H H+ S + CS Sbjct: 7 HGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCS 42 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 H QH ++ H H H H HY + H H+ S Sbjct: 3 HEEQHGGHHHHHHHTH------HHHYHGGEHHHHHHS 33
>HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide| Length = 59 Score = 29.3 bits (64), Expect = 6.8 Identities = 10/34 (29%), Positives = 15/34 (44%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKH 474 HH H Y+ + H H+ S + CS + H Sbjct: 15 HHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHH 48 Score = 29.3 bits (64), Expect = 6.8 Identities = 11/36 (30%), Positives = 15/36 (41%) Frame = +1 Query: 376 HNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 H H ++ H H HY H H+ S + CS Sbjct: 7 HGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCS 42 Score = 29.3 bits (64), Expect = 6.8 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHYCSCREHKHYCSCQEHKHYCS 483 H QH ++ H H H H HY + H H+ S Sbjct: 3 HEEQHGGHHHHHHHTH------HHHYHGGEHHHHHHS 33
>LEG3_MOUSE (P16110) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) (L-34 galactoside-binding lectin) Length = 263 Score = 29.3 bits (64), Expect = 6.8 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -3 Query: 502 FGTRPGS--YSSAYVPGSYSSAYVPGSYSSAYVPGDY 398 +G +PG+ Y A PG+Y PG+Y PG Y Sbjct: 25 WGNQPGAGGYPGAAYPGAYPGQAPPGAYPGQAPPGAY 61
>CNTP1_RAT (P97846) Contactin-associated protein 1 precursor (Caspr) (Caspr1)| (Neurexin 4) (Neurexin IV) (p190) (Paranodin) Length = 1381 Score = 29.3 bits (64), Expect = 6.8 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 Query: 490 PGSYSSAYVPGSYSSAYVPGSYSSAYVPGDYSR 392 PG Y Y+PG + YVPG + Y DY R Sbjct: 1034 PG-YEPGYIPGYDTPGYVPGYHGPGYRLPDYPR 1065
>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 241 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 490 PGSYSSAYVPGSYSSAYVPGSYSSAYVPGDY 398 PG Y A PG+Y + PG+Y PG Y Sbjct: 32 PGGYPGAAYPGAY-PGHAPGAYPGQAPPGPY 61
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 29.3 bits (64), Expect = 6.8 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +1 Query: 373 HHNQHSPYYSHQEHKHY 423 HHN H P++ H H H+ Sbjct: 38 HHNSHHPHHHHHHHHHH 54
>HMH2_DROME (P10035) Homeobox protein H2.0| Length = 418 Score = 29.3 bits (64), Expect = 6.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 364 QMLHHNQHSPYYSHQEHK 417 Q HH+QH P + HQ+HK Sbjct: 197 QQHHHHQHHPKHLHQQHK 214
>SDC3_CHICK (P26261) Syndecan-3 precursor| Length = 405 Score = 28.9 bits (63), Expect = 8.9 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +2 Query: 359 TSKCSIITSIAPTIVTRNISTTVAAGNISTTVAARNISTTVAARPSAKTSRFI 517 T+ S S +P+ T + +TT AA +TT ISTTVA T RF+ Sbjct: 134 TTTASTTASDSPS--TTSTTTTTAA---TTTTTTTTISTTVATSKPTTTQRFL 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,306,207 Number of Sequences: 219361 Number of extensions: 706239 Number of successful extensions: 3637 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2673 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3324 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
