ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1b20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 83.8 bits (42), Expect = 2e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 45 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 101 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 127821 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 127762 Query: 102 taattaca 109 |||||||| Sbjct: 127761 taattaca 127754
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 2e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 45 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 101 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 20880996 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 20880937 Query: 102 taattaca 109 |||||||| Sbjct: 20880936 taattaca 20880929
>dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F17, full insert sequence Length = 3847 Score = 83.8 bits (42), Expect = 2e-13 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand = Plus / Minus Query: 45 cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 101 |||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 3581 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 3522 Query: 102 taattaca 109 |||||||| Sbjct: 3521 taattaca 3514
>gb|AY109956.1| Zea mays CL7164_1 mRNA sequence Length = 1059 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 53 atacaacaccaaaagaatggatcaaaattc 82 ||||||||||||||||||||||| |||||| Sbjct: 821 atacaacaccaaaagaatggatcgaaattc 792
>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete sequences Length = 171187 Score = 46.1 bits (23), Expect = 0.037 Identities = 23/23 (100%) Strand = Plus / Minus Query: 119 ggaaaaaatacaggcaacccaaa 141 ||||||||||||||||||||||| Sbjct: 47460 ggaaaaaatacaggcaacccaaa 47438
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 aggcaacccaaagaaaagagga 151 |||||||||||||||||||||| Sbjct: 70537 aggcaacccaaagaaaagagga 70516
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 aggcaacccaaagaaaagagga 151 |||||||||||||||||||||| Sbjct: 8495384 aggcaacccaaagaaaagagga 8495363 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 tgctaattacaatgaatgg 117 ||||||||||||||||||| Sbjct: 30537450 tgctaattacaatgaatgg 30537468
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 aggcaacccaaagaaaagagga 151 |||||||||||||||||||||| Sbjct: 110339 aggcaacccaaagaaaagagga 110318
>dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F1M23 Length = 112684 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 tgctcttttatcatacaacaccaaaa 66 |||| ||||||||||||||||||||| Sbjct: 5162 tgcttttttatcatacaacaccaaaa 5187
>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence Length = 185763 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 atgatgctaattacaatgaatg 116 |||||||||||||||||||||| Sbjct: 82911 atgatgctaattacaatgaatg 82932
>gb|U39794.1|HSU39794 Human lambda clone 247 FRA3B region DNA Length = 464 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 atgatgctaattacaatgaatg 116 |||||||||||||||||||||| Sbjct: 216 atgatgctaattacaatgaatg 237
>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence Length = 144240 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 aagaaaagaggagcttcctttttca 164 |||||||||||||||| |||||||| Sbjct: 93797 aagaaaagaggagcttactttttca 93821
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gatgctaattacaatgaatg 116 |||||||||||||||||||| Sbjct: 54630 gatgctaattacaatgaatg 54649
>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aatgggggaaaaaatacagg 132 |||||||||||||||||||| Sbjct: 22223 aatgggggaaaaaatacagg 22204
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aaaaatacaggcaacccaaa 141 |||||||||||||||||||| Sbjct: 122210 aaaaatacaggcaacccaaa 122191
>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete sequence Length = 223059 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 aattacaatgaatgggggaaaaaa 126 |||||||||| ||||||||||||| Sbjct: 22564 aattacaatgtatgggggaaaaaa 22587
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ataatacacaacatgatgct 102 |||||||||||||||||||| Sbjct: 58172 ataatacacaacatgatgct 58153
>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129, complete sequence Length = 110487 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 gcaacccaaagaaaagaggagctt 155 ||||| |||||||||||||||||| Sbjct: 68770 gcaacgcaaagaaaagaggagctt 68747
>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP region, complete sequence Length = 150681 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aaaaatacaggcaacccaaa 141 |||||||||||||||||||| Sbjct: 110433 aaaaatacaggcaacccaaa 110414
>ref|XM_629023.1| Dictyostelium discoideum hypothetical protein (DDB0192024), partial mRNA Length = 6045 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 aaattcataatacacaaca 95 ||||||||||||||||||| Sbjct: 1511 aaattcataatacacaaca 1529
>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete sequence Length = 212576 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 accctgctcttttatcata 55 ||||||||||||||||||| Sbjct: 48399 accctgctcttttatcata 48381
>gb|DQ102364.1| Capsicum annuum WRKY-A1244 mRNA, complete cds Length = 1389 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 atgatgctaattacaatga 113 ||||||||||||||||||| Sbjct: 1277 atgatgctaattacaatga 1259
>gb|AC115705.13| Mus musculus chromosome 3, clone RP23-390C13, complete sequence Length = 207221 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 159 ttttcaaaagggagtttag 177 ||||||||||||||||||| Sbjct: 69473 ttttcaaaagggagtttag 69455
>emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chromosome 14, complete sequence Length = 227368 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 catgatgctaattacaatg 112 ||||||||||||||||||| Sbjct: 92447 catgatgctaattacaatg 92465
>emb|CR974429.7| Mouse DNA sequence from clone RP23-177B9 on chromosome 12, complete sequence Length = 212593 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 tacacaacatgatgctaat 105 ||||||||||||||||||| Sbjct: 175248 tacacaacatgatgctaat 175266
>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14, complete sequence Length = 207245 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 39161 acaacaccaaaagaatgga 39143
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ttttatcatacaacaccaaaaga 68 |||||| |||||||||||||||| Sbjct: 223645 ttttataatacaacaccaaaaga 223667
>ref|XM_845894.1| PREDICTED: Canis familiaris similar to Protein C5orf5 (GAP-like protein N61), transcript variant 2 (LOC474690), mRNA Length = 5439 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 atgggggaaaaaatacagg 132 ||||||||||||||||||| Sbjct: 4011 atgggggaaaaaatacagg 3993
>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5, complete sequence Length = 190731 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 95902 acaacaccaaaagaatgga 95920
>gb|AC146122.2| Pan troglodytes BAC clone RP43-23C4 from 7, complete sequence Length = 143388 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 cccaaagaaaagaggagct 154 ||||||||||||||||||| Sbjct: 90529 cccaaagaaaagaggagct 90511
>gb|AC079398.8| Homo sapiens BAC clone RP11-330E10 from 7, complete sequence Length = 63681 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 caaaattcataatacacaa 93 ||||||||||||||||||| Sbjct: 3739 caaaattcataatacacaa 3757
>gb|AC025728.4| Homo sapiens PAC clone RP5-884M6 from 7, complete sequence Length = 36215 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 cccaaagaaaagaggagct 154 ||||||||||||||||||| Sbjct: 32692 cccaaagaaaagaggagct 32674
>ref|XM_671747.1| Plasmodium berghei strain ANKA hypothetical protein (PB000662.03.0) partial mRNA Length = 2151 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 atgaatgggggaaaaaata 128 ||||||||||||||||||| Sbjct: 1228 atgaatgggggaaaaaata 1246
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 121 aaaaaatacaggcaacccaaagaaaag 147 |||||||| | |||||||||||||||| Sbjct: 2375 aaaaaataaatgcaacccaaagaaaag 2349
>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence Length = 223119 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 caaaagaatggatcaaaat 80 ||||||||||||||||||| Sbjct: 183425 caaaagaatggatcaaaat 183407
>emb|AL732591.4| Human DNA sequence from clone RP11-566B18 on chromosome Xq24-25, complete sequence Length = 94595 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 tatcatacaacaccaaaag 67 ||||||||||||||||||| Sbjct: 71854 tatcatacaacaccaaaag 71836
>emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on chromosome 10 Contains the 5' end of the variant of a novel gene, complete sequence Length = 188937 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 147 gaggagcttcctttttcaa 165 ||||||||||||||||||| Sbjct: 124309 gaggagcttcctttttcaa 124291
>emb|AL139123.15| Human DNA sequence from clone RP11-500G10 on chromosome 10 Contains three novel genes, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, a meningioma expressed antigen 6 (MGEA6) pseudogene, a novel protein similar thioredoxin-like 2 (TXNL2) and four CpG islands, complete sequence Length = 209527 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 atacaacaccaaaagaatg 71 ||||||||||||||||||| Sbjct: 64253 atacaacaccaaaagaatg 64271
>emb|AL031177.1|HS889N15 Human DNA sequence from clone RP5-889N15 on chromosome Xq22.1-22.3 Contains the 3' end of a novel gene (MGC44287), the PSMD10 gene for proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (p28), the AUTL2 gene for AUT-like 2, cysteine endopeptidase (S. cerevisiae) (APG4A, MGC43691), the 3' end of the COL4A6 gene for collagen, type IV, alpha 6 and a CpG island, complete sequence Length = 123395 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 tacaacaccaaaagaatgg 72 ||||||||||||||||||| Sbjct: 47101 tacaacaccaaaagaatgg 47083
>ref|XM_967447.1| PREDICTED: Tribolium castaneum similar to CG6428-PA (LOC661275), mRNA Length = 1020 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 acaccaaaagaatggatcaaaat 80 |||||||| |||||||||||||| Sbjct: 178 acaccaaatgaatggatcaaaat 200
>gb|AC110014.4| Homo sapiens chromosome 18, clone CTC-782O7, complete sequence Length = 148075 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 133 caacccaaagaaaagagga 151 ||||||||||||||||||| Sbjct: 110063 caacccaaagaaaagagga 110081
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 gaatgggggaaaaaataca 130 ||||||||||||||||||| Sbjct: 61478 gaatgggggaaaaaataca 61496
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 158 tttttcaaaagggagttta 176 ||||||||||||||||||| Sbjct: 63742 tttttcaaaagggagttta 63724
>emb|CR932965.2| Medicago truncatula chromosome 5 clone mth2-47e6, COMPLETE SEQUENCE Length = 96647 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 71 ggatcaaaattcataatacacaacatg 97 |||||||||||||| ||||||||||| Sbjct: 67382 ggatcaaaattcatgctacacaacatg 67356
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11, complete sequence Length = 133334 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 atacaacaccaaaagaatg 71 ||||||||||||||||||| Sbjct: 21772 atacaacaccaaaagaatg 21754
>emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in linkage group 3, complete sequence Length = 233901 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 216984 acaacaccaaaagaatgga 217002
>gb|AC022450.5| Homo sapiens chromosome 5 clone RP11-96F10, complete sequence Length = 160076 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 atacaacaccaaaagaatg 71 ||||||||||||||||||| Sbjct: 119405 atacaacaccaaaagaatg 119423
>emb|CR388095.8| Zebrafish DNA sequence from clone CH211-199M9 in linkage group 14, complete sequence Length = 208632 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 159909 acaacaccaaaagaatgga 159927
>gb|AC103579.10| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Clone RP23-145J23, Complete Sequence, complete sequence Length = 227361 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 catgatgctaattacaatg 112 ||||||||||||||||||| Sbjct: 155592 catgatgctaattacaatg 155574
>emb|BX572103.8| Zebrafish DNA sequence from clone CH211-215L16 in linkage group 11, complete sequence Length = 204701 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 167442 acaacaccaaaagaatgga 167460
>gb|AC025174.5| Homo sapiens chromosome 5 clone CTD-2072I24, complete sequence Length = 110756 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 113 aatgggggaaaaaatacag 131 ||||||||||||||||||| Sbjct: 70200 aatgggggaaaaaatacag 70182
>gb|AC084754.14| Homo sapiens 12p BAC RP11-874G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176626 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 aatgaatgggggaaaaaat 127 ||||||||||||||||||| Sbjct: 93649 aatgaatgggggaaaaaat 93631
>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence Length = 131409 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 aacatgatgctaattacaa 110 ||||||||||||||||||| Sbjct: 111339 aacatgatgctaattacaa 111321
>dbj|AK032577.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430601A15 product:unclassifiable, full insert sequence Length = 3004 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 caaaagggagtttagggaa 181 ||||||||||||||||||| Sbjct: 2113 caaaagggagtttagggaa 2095
>dbj|AK035499.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530056P15 product:unclassifiable, full insert sequence Length = 1854 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ttttatcatacaacaccaaaaga 68 |||||| |||||||||||||||| Sbjct: 1346 ttttataatacaacaccaaaaga 1368
>gb|DQ350769.1| Ajellomyces capsulatus yeast dnaJ homolog-like protein (YDJ1) gene, partial sequence Length = 2406 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 145 aagaggagcttcctttttc 163 ||||||||||||||||||| Sbjct: 2160 aagaggagcttcctttttc 2178
>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone BACR09F03, complete sequence Length = 165118 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 119 ggaaaaaatacaggcaacccaaagaaa 145 |||||||||||| | |||||||||||| Sbjct: 107861 ggaaaaaatacaagaaacccaaagaaa 107887
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 tgctaattacaatgaatgg 117 ||||||||||||||||||| Sbjct: 20054 tgctaattacaatgaatgg 20072
>emb|BX004818.16| Zebrafish DNA sequence from clone DKEY-64O12, complete sequence Length = 215899 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aaaattcataatacacaac 94 ||||||||||||||||||| Sbjct: 2647 aaaattcataatacacaac 2629
>gb|BC093371.1| Danio rerio cDNA clone IMAGE:7421646 Length = 1476 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 aacatgatgctaattacaa 110 ||||||||||||||||||| Sbjct: 1021 aacatgatgctaattacaa 1039
>emb|AL953907.19| Zebrafish DNA sequence from clone CH211-229I14, complete sequence Length = 151514 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 caaaagaatggatcaaaat 80 ||||||||||||||||||| Sbjct: 44952 caaaagaatggatcaaaat 44934
>ref|XM_312233.2| Anopheles gambiae str. PEST ENSANGP00000002724 (ENSANGG00000002255), partial mRNA Length = 2358 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 aaattcataatacacaaca 95 ||||||||||||||||||| Sbjct: 1886 aaattcataatacacaaca 1868
>emb|BX510994.6| Zebrafish DNA sequence from clone CH211-51F10 in linkage group 19, complete sequence Length = 186973 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 aacatgatgctaattacaatgaa 114 |||||||||||||| |||||||| Sbjct: 116193 aacatgatgctaatcacaatgaa 116215
>emb|BX324170.6| Zebrafish DNA sequence from clone DKEY-172O19 in linkage group 22, complete sequence Length = 181536 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 aatgaatgggggaaaaaat 127 ||||||||||||||||||| Sbjct: 105977 aatgaatgggggaaaaaat 105995
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 119 ggaaaaaatacaggcaacccaaagaaa 145 |||||||||||| | |||||||||||| Sbjct: 108616 ggaaaaaatacaagaaacccaaagaaa 108642
>emb|BX294383.7| Zebrafish DNA sequence from clone DKEYP-35E5 in linkage group 4, complete sequence Length = 184004 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 acaacaccaaaagaatgga 73 ||||||||||||||||||| Sbjct: 157259 acaacaccaaaagaatgga 157241
>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence Length = 175793 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 105 ttacaatgaatgggggaaaaaat 127 ||||||||| ||||||||||||| Sbjct: 133700 ttacaatgactgggggaaaaaat 133722
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 aaaaatacaggcaacccaa 140 ||||||||||||||||||| Sbjct: 2819847 aaaaatacaggcaacccaa 2819829
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1, complete sequence Length = 229480 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 cacaacatgatgctaatta 107 ||||||||||||||||||| Sbjct: 73138 cacaacatgatgctaatta 73156
>emb|AL954669.8| Zebrafish DNA sequence from clone DKEY-81J5, complete sequence Length = 133954 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 aatgaatgggggaaaaaat 127 ||||||||||||||||||| Sbjct: 50604 aatgaatgggggaaaaaat 50586
>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete sequence Length = 163813 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ttttatcatacaacaccaaaaga 68 |||||| |||||||||||||||| Sbjct: 119629 ttttataatacaacaccaaaaga 119651
>emb|AL844553.4| Mouse DNA sequence from clone RP23-255J15 on chromosome 2, complete sequence Length = 82080 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 163 caaaagggagtttagggaa 181 ||||||||||||||||||| Sbjct: 7801 caaaagggagtttagggaa 7819
>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete sequence Length = 201752 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 gaaaaaatacaggcaaccc 138 ||||||||||||||||||| Sbjct: 88196 gaaaaaatacaggcaaccc 88178
>gb|L14679.1|LACPIP Lactococcus lactis pip and gerC2 genes, complete cds's, and rrg gene, 5' end of cds Length = 4270 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 agcttcctttttcaaaagg 169 ||||||||||||||||||| Sbjct: 3543 agcttcctttttcaaaagg 3525
>emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chromosome 1, complete sequence Length = 132639 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 32 cctataccctgctcttttatcat 54 |||||||| |||||||||||||| Sbjct: 126612 cctataccgtgctcttttatcat 126634 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,587,319 Number of Sequences: 3902068 Number of extensions: 2587319 Number of successful extensions: 191228 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 190838 Number of HSP's gapped (non-prelim): 390 length of query: 182 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 160 effective length of database: 17,147,199,772 effective search space: 2743551963520 effective search space used: 2743551963520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
