ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags24a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FCP1_SCHPO (Q9P376) RNA polymerase II subunit A C-terminal domai... 55 1e-07
2FCP1_YEAST (Q03254) RNA polymerase II subunit A C-terminal domai... 53 7e-07
3CTDP1_MOUSE (Q7TSG2) RNA polymerase II subunit A C-terminal doma... 48 2e-05
4CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal doma... 46 8e-05
5ECT2_HUMAN (Q9H8V3) ECT2 protein (Epithelial cell-transforming s... 38 0.030
6TOPB1_HUMAN (Q92547) DNA topoisomerase 2-binding protein 1 (DNA ... 35 0.15
7TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA... 35 0.15
8HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li... 33 0.74
9NEUM_PANTR (Q5IS67) Neuromodulin (Axonal membrane protein GAP-43... 33 0.74
10NEUM_HUMAN (P17677) Neuromodulin (Axonal membrane protein GAP-43... 33 0.74
11NEUM_RAT (P07936) Neuromodulin (Axonal membrane protein GAP-43) ... 33 0.97
12TRX_DROVI (Q24742) Protein trithorax 33 0.97
13ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming s... 33 0.97
14NEUM_MOUSE (P06837) Neuromodulin (Axonal membrane protein GAP-43... 33 0.97
15HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment) 32 1.7
16AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor ... 31 2.8
17BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1) 31 2.8
18BCOR_HUMAN (Q6W2J9) BCoR protein (BCL-6 corepressor) 31 3.7
19BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor) 30 4.8
20RAD4_SCHPO (P32372) S-M checkpoint control protein rad4 (Protein... 30 4.8
21VG50_ICHV1 (Q00130) Hypothetical gene 50 protein 30 4.8
22RPOD_MYXXA (P17531) RNA polymerase sigma factor rpoD (Sigma-80) 30 4.8
23SETD8_DROME (Q9VFK6) Histone-lysine N-methyltransferase, H4 lysi... 30 4.8
24PSAE_HORVU (P13194) Photosystem I reaction center subunit IV, ch... 30 4.8
25FABZ_PSESM (Q886N2) (3R)-hydroxymyristoyl-[acyl carrier protein]... 30 6.3
26SALM_DROME (P39770) Homeotic protein spalt-major 30 6.3
27OVO_DROME (P51521) Protein ovo (Protein shaven baby) 30 6.3
28PTHR1_DIDMA (P25107) Parathyroid hormone/parathyroid hormone-rel... 30 8.2
29RL22_DROME (P50887) 60S ribosomal protein L22 30 8.2
30EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elonga... 30 8.2
31EX5C_BUCAI (P57528) Exodeoxyribonuclease V gamma chain (EC 3.1.1... 30 8.2

>FCP1_SCHPO (Q9P376) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (CTD phosphatase fcp1)
          Length = 723

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -1

Query: 621 DVRQVIKRVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGAICSADVDSTITHVVA 442
           +V  +I +++Q+VL+GC+L+FS V P         I K A   GA    D     TH++A
Sbjct: 478 NVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIA 537

Query: 441 VDVGTDKARWAVKNNKI-LVHPRWIEASNFRWHRQQEEDF 325
             + T+K + AV    I +V   W+  S  +W R  E D+
Sbjct: 538 AKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDY 577



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>FCP1_YEAST (Q03254) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (CTD phosphatase FCP1)
          Length = 732

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
 Frame = -1

Query: 621 DVRQVIKRVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGAICSADVDSTITHVVA 442
           ++ ++I  ++Q+V Q C  VFS + P  +  Q   I       GA  + D+D   TH++ 
Sbjct: 491 NLMEIIPSLKQKVFQNCYFVFSGLIPLGTDIQRSDIVIWTSTFGATSTPDIDYLTTHLIT 550

Query: 441 VDVGTDKARWAVKNNK--ILVHPRWIEASNFRWHRQQEEDF 325
            +  T KAR A K N    +VHP WI      W +  E+ +
Sbjct: 551 KNPSTYKARLAKKFNPQIKIVHPDWIFECLVNWKKVDEKPY 591



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>CTDP1_MOUSE (Q7TSG2) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 960

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
 Frame = -1

Query: 621 DVRQVIKRVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGA------ICSADVDST 460
           D+R+++  ++ +VL    ++FS + P++   +       A  LGA      + S D    
Sbjct: 611 DIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKTREHYHATALGAKVLTQLVLSPDAPDR 670

Query: 459 ITHVVAVDVGTDKARWAVKNNKI-LVHPRWIEASNFRWHRQQEEDFP 322
            TH++A   GT+K R A +   + +V P W+ +   RW + +E+ FP
Sbjct: 671 ATHLIAARAGTEKVRQAQECKHLHVVSPDWLWSCLERWDKVEEQLFP 717



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>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 961

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
 Frame = -1

Query: 621 DVRQVIKRVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGA------ICSADVDST 460
           D+R+++  ++ +VL    ++FS + P++   +       A  LGA      + S D    
Sbjct: 621 DIRKIVPELKSKVLADVAIIFSGLHPTNFPIEKTREHYHATALGAKILTRLVLSPDAPDR 680

Query: 459 ITHVVAVDVGTDKARWAVKNNKI-LVHPRWIEASNFRWHRQQEEDFP 322
            TH++A   GT+K   A +   + +V+P W+ +   RW + +E+ FP
Sbjct: 681 ATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWDKVEEQLFP 727



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>ECT2_HUMAN (Q9H8V3) ECT2 protein (Epithelial cell-transforming sequence 2|
           oncogene)
          Length = 883

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 507 MAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNKILVHPRWIEASNFRWHRQQEED 328
           +   +G +   D +S +TH+VA     +K R AV     ++ P WI  +   W R+ E+D
Sbjct: 167 LVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKA---WERRNEQD 223

Query: 327 F 325
           F
Sbjct: 224 F 224



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>TOPB1_HUMAN (Q92547) DNA topoisomerase 2-binding protein 1 (DNA topoisomerase|
           II-binding protein 1) (DNA topoisomerase IIbeta-binding
           protein 1) (TopBP1)
          Length = 1522

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 543 SSSRPQDQFIWKMAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNKILVHPRWIEA 364
           S  + + + + K  + +G     D++ ++TH++A +VG+ K   A    K ++ P WI+ 
Sbjct: 115 SLEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKT 174

Query: 363 SNFRWHRQQEE 331
               W + QE+
Sbjct: 175 ---LWEKSQEK 182



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>TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA topoisomerase|
           IIbeta-binding protein 1) (TopBP1)
          Length = 1515

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 543 SSSRPQDQFIWKMAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNKILVHPRWIEA 364
           S  + + + + K  + +G     D++ ++TH++A +VG+ K   A    K ++ P WI+ 
Sbjct: 115 SLDKDKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKT 174

Query: 363 SNFRWHRQQEE 331
               W + QE+
Sbjct: 175 ---LWEKSQEK 182



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>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 24/70 (34%), Positives = 30/70 (42%)
 Frame = -1

Query: 267  TNPANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTDSANS*DT 88
            T P+  K KQ      P +   E  K+  VAP  + P K+K KE      V    N+  T
Sbjct: 1322 TTPSEPKKKQPP----PPESGPEQSKQKKVAPRPSIPVKQKPKEKEKPPPVNKQENA-GT 1376

Query: 87   HNGLSTCFKG 58
             N LST   G
Sbjct: 1377 LNILSTLSNG 1386



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>NEUM_PANTR (Q5IS67) Neuromodulin (Axonal membrane protein GAP-43)|
           (Growth-associated protein 43)
          Length = 238

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 18/75 (24%)
 Frame = -1

Query: 273 AATNPANEKDKQDDVA---AAPSDPANENDK------------EDDVAP---AATAPAKE 148
           A   P+ EK  + D A   AAP  PA+  +K              D +P   A  APAKE
Sbjct: 104 AGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKE 163

Query: 147 KDKENGVAAAVTDSA 103
           + K+  V AAVT +A
Sbjct: 164 EPKQADVPAAVTAAA 178



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>NEUM_HUMAN (P17677) Neuromodulin (Axonal membrane protein GAP-43)|
           (Growth-associated protein 43) (PP46) (Neural
           phosphoprotein B-50)
          Length = 238

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 18/75 (24%)
 Frame = -1

Query: 273 AATNPANEKDKQDDVA---AAPSDPANENDK------------EDDVAP---AATAPAKE 148
           A   P+ EK  + D A   AAP  PA+  +K              D +P   A  APAKE
Sbjct: 104 AGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKE 163

Query: 147 KDKENGVAAAVTDSA 103
           + K+  V AAVT +A
Sbjct: 164 EPKQADVPAAVTAAA 178



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>NEUM_RAT (P07936) Neuromodulin (Axonal membrane protein GAP-43)|
           (Growth-associated protein 43) (Protein F1)
          Length = 226

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
 Frame = -1

Query: 273 AATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAAT----------APAKEKDKENGVA 124
           A   P+ EK  + D  AAPS+    + + +  A A T           PAKE+ K+  V 
Sbjct: 105 AGDAPSEEKKGEGD--AAPSEEKAGSAETESAAKATTDNSPSSKAEDGPAKEEPKQADVP 162

Query: 123 AAVTDSA 103
           AAVTD+A
Sbjct: 163 AAVTDAA 169



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>TRX_DROVI (Q24742) Protein trithorax|
          Length = 3828

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = -1

Query: 279 AAAATNPANEKDKQDDVAAAPSDPANENDKEDDV-APAATAPAKEKDKENGVAAAVTDSA 103
           A AAT   +++ +Q   ++A  +  N  D +DD  AP+  A +  +   +G + A  +  
Sbjct: 38  ATAATTEQHQQSEQSAGSSASREKGNNCDNDDDDNAPSGAATSGNRGASSGASDAAPEGG 97

Query: 102 NS*DTHNGLSTCFKGIN 52
           NS    NG ST  K  N
Sbjct: 98  NS--YGNGSSTGSKTTN 112



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>ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming sequence 2|
           oncogene)
          Length = 738

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -1

Query: 507 MAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNKILVHPRWIEASNFRWHRQQEED 328
           +   +G +   + +S +TH+VA     +K R AV     ++ P WI  +   W R+ E+ 
Sbjct: 23  LVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKA---WERRNEQC 79

Query: 327 F 325
           F
Sbjct: 80  F 80



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>NEUM_MOUSE (P06837) Neuromodulin (Axonal membrane protein GAP-43)|
           (Growth-associated protein 43) (Calmodulin-binding
           protein P-57)
          Length = 227

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
 Frame = -1

Query: 273 AATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAAT----------APAKEKDKENGVA 124
           A   P+ EK  + D  AAPS+    + + +  A A T           PAKE+ K+  V 
Sbjct: 105 AGDAPSEEKKGEGD--AAPSEEKAGSAETESAAKATTDNSPSSKAEDGPAKEEPKQADVP 162

Query: 123 AAVTDSA 103
           AAVTD+A
Sbjct: 163 AAVTDAA 169



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>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = -1

Query: 261  PANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTDSANS*DTHN 82
            P+  K KQ      P +P  E  K+  VAP  + P K+K K+      V+   N+  T N
Sbjct: 1223 PSEPKKKQPP----PPEPGPEQSKQKKVAPLPSIPVKQKPKDKEKPPPVSKQENA-GTLN 1277

Query: 81   GLSTCFKGIN 52
             L+    GI+
Sbjct: 1278 ILNPLSNGIS 1287



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>AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 687

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = -1

Query: 279 AAAATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTDSA 103
           AAA ++   E +   D A A SDP  E   E+    AA+     +DK  G AA   + A
Sbjct: 592 AAAHSDVLTEVEGPVDTAEASSDPHTEKLLEEQTCEAASETRSIEDKTRGEAAEARNEA 650



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>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)|
          Length = 768

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -1

Query: 537 SRPQDQFIWKMAEQLGAICSADVDSTITHVVAVD---VGTDKARWAVKNNKILVHPRWIE 367
           S  Q + + K+   L A   A+ D+T+THV+  D     T K    + N   ++   W++
Sbjct: 569 SSQQQKLLSKLETVLKAKKCAEFDNTVTHVIVPDEEAQSTLKCMLGILNGCWVLKFDWVK 628

Query: 366 ASNFRWHRQQEEDF 325
           A      R+QEE +
Sbjct: 629 ACLDSQEREQEEKY 642



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>BCOR_HUMAN (Q6W2J9) BCoR protein (BCL-6 corepressor)|
          Length = 1755

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
 Frame = +1

Query: 343  PMPPEIRGF------------NPAGVDQDLVVLNCPTGFICSNIHSDNMGDC*IHVRRAN 486
            PMPPE R                A +  + VVL C    IC   H DN G C +H   A 
Sbjct: 1448 PMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACAR 1507

Query: 487  G 489
            G
Sbjct: 1508 G 1508



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>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
 Frame = +1

Query: 343  PMPPEIRGF------------NPAGVDQDLVVLNCPTGFICSNIHSDNMGDC*IHVRRAN 486
            PMPPE R                A +  + VVL C    +C   H DN G C +H   A 
Sbjct: 1452 PMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAGYCALHEACAR 1511

Query: 487  G 489
            G
Sbjct: 1512 G 1512



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>RAD4_SCHPO (P32372) S-M checkpoint control protein rad4 (Protein cut5) (P74)|
          Length = 648

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -1

Query: 504 AEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNK--ILVHPRWIEASNFRWHRQQEE 331
           A +LGA   +D    +TH++A D  T K ++A K+     ++   WI      W + ++ 
Sbjct: 29  ATKLGAAYRSDFTKDVTHLIAGDFDTPKYKFAAKSRPDIKIMSSEWIPVLYESWVQGEDL 88

Query: 330 D 328
           D
Sbjct: 89  D 89



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>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein|
          Length = 670

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = -1

Query: 270 ATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAATA--PAKEKDKENGVAAAVTDS--A 103
           +  PA   D    V   P+ PA  ND  +D     T   PA   D  NG A   T +  A
Sbjct: 199 SATPAGANDTA--VTTTPATPAGANDTANDTVVTTTPAMPAGANDTANGTAVTTTPAMPA 256

Query: 102 NS*DTHNGLSTCFKGIN*T 46
            + DT N  +    G N T
Sbjct: 257 GANDTANITTATPTGANDT 275



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>RPOD_MYXXA (P17531) RNA polymerase sigma factor rpoD (Sigma-80)|
          Length = 708

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 264 NPANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKE--KDKENGVAAAVTDSAN 100
           +P   K K  D AAA        +KE+ VA    A A E  K K+ GVA A+ D  +
Sbjct: 19  DPVIRKKKAPDGAAAKGAKTGAEEKEELVARDVVAEATEKLKKKKKGVAPAMGDDVD 75



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>SETD8_DROME (Q9VFK6) Histone-lysine N-methyltransferase, H4 lysine-20 specific|
           (EC 2.1.1.43) (Histone H4-K20 methyltransferase)
           (H4-K20-HMTase) (dSET8)
          Length = 691

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 252 EKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTDS 106
           ++ +QDD+     D  +E D EDDV  A    A+E++ +N   A    +
Sbjct: 433 QQQQQDDIVVVLDDDDDEGDDEDDVR-ALIKAAEERENQNKAPATANSN 480



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>PSAE_HORVU (P13194) Photosystem I reaction center subunit IV, chloroplast|
           precursor (PSI-E) (Photosystem I 10.8 kDa polypeptide)
          Length = 147

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 240 QDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENG 130
           ++  AAAP++PA   D++ + A A   PAK K    G
Sbjct: 48  EEPTAAAPAEPAPAADEKPEAAVATKEPAKAKPPPRG 84



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>FABZ_PSESM (Q886N2) (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase|
           (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase)
          Length = 146

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 600 RVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGAICSADV 469
           R RQ V  G KLV    F SS R   +F  K      A+CSA++
Sbjct: 96  RFRQPVFPGDKLVLEATFLSSKRQIWKFECKATVDGKAVCSAEI 139



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>SALM_DROME (P39770) Homeotic protein spalt-major|
          Length = 1365

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 273 AATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTDSANS 97
           A T P++E+ + +   + PS P  E   E+  A     P KEK+K+  V     D A S
Sbjct: 128 AMTKPSSEEREPNASGSMPSSPVAEASAEE--AATERTPEKEKEKDVEVDVEKPDEAPS 184



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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = +3

Query: 159  EQWQQEQHRLLYHFHSL----DQREQQQHH 236
            +Q QQ+QH   Y  H++     Q++QQQHH
Sbjct: 927  QQQQQQQHAAAYQQHNIYAQQQQQQQQQHH 956



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>PTHR1_DIDMA (P25107) Parathyroid hormone/parathyroid hormone-related peptide|
           receptor precursor (PTH/PTHr receptor) (PTH/PTHrP type I
           receptor)
          Length = 585

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 341 CRCHRKFEASIQRGWTRILLFLTAQRALSVPTSTATTWVIVESTSAEQMAP 493
           C C+ + +A I++ W+R  L L  +R     +ST +   +V  TS   + P
Sbjct: 454 CFCNGEVQAEIKKSWSRWTLALDFKRKARSGSSTYSYGPMVSHTSVTNVGP 504



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>RL22_DROME (P50887) 60S ribosomal protein L22|
          Length = 299

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = -1

Query: 279 AAAATNPANEKDKQDDVAAAPSD-----PANENDKEDDVAPAATAPAK 151
           AAAA  PA  K      AAA  D     PA    K+D  A AA APAK
Sbjct: 66  AAAAAKPAAAKPAAAKPAAASKDAGKKAPAAAAPKKDAKAAAAPAPAK 113



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>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor|
           1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta')
           (EF-1-beta')
          Length = 215

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -1

Query: 279 AAAATNPANEKDKQDDVAAAPSDPANENDKEDDVAPAATAPAKEKDKENGVAAAVTD 109
           A AA  PA  KD+ DD          E DK+      A  PAK+  KE+G ++ + D
Sbjct: 80  APAAAAPAASKDEDDDDDMDLFGDETEEDKKAAAEREAAKPAKK--KESGKSSVLMD 134



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>EX5C_BUCAI (P57528) Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)|
          Length = 1070

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 540 SSRPQDQFIWKMAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNNKILVHPRWIEAS 361
           SS+  +  +W   + L    S   +  I  ++ V    +K  ++ +  KIL H  WIE +
Sbjct: 398 SSKTTEIMLWSFKKILNLSNSRFENEEILELLDVPEIAEKFNFSEEEIKILYH--WIEET 455

Query: 360 NFRW 349
           N RW
Sbjct: 456 NIRW 459


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,160,893
Number of Sequences: 219361
Number of extensions: 1674242
Number of successful extensions: 6378
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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