ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags24a01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096L04, full insert sequence Length = 1890 Score = 170 bits (86), Expect = 4e-39 Identities = 254/310 (81%) Strand = Plus / Minus Query: 326 aaatcttcctcctgctgccgatgccaccggaaattcgaggcttcaatccagcgggggtgg 385 ||||| ||||| || ||||| ||||| |||||||| | ||| |||||||||||||||||| Sbjct: 1471 aaatcctcctcttgttgccgttgccatcggaaatttgcggcctcaatccagcgggggtgg 1412 Query: 386 accaggatcttgttgttcttaactgcccaacgggctttatctgttccaacatccacagcg 445 |||| | ||| ||||| |||| ||||| || || || || ||||| | ||||| ||| Sbjct: 1411 accaaaaacttcttgttactaacagcccagcgagccttctccgttcctagatccaaagca 1352 Query: 446 acaacatgggtgattgttgaatccacgtccgcagagcaaatggctcccagctgctcagcc 505 ||||||||||||| || |||||||| || | |||||| ||| |||| |||||| ||| Sbjct: 1351 acaacatgggtgaccgtagaatccacatctgtgcagcaaacggcacccaactgctcggcc 1292 Query: 506 atcttccagataaactgatcctgtgggcgagaactggacgggaagacccgactgaagact 565 ||||||||||| | |||||| ||| |||| | ||||||| || || | || ||| Sbjct: 1291 atcttccagatcatctgatcttgttggcgctgatgtaacgggaatacacgcgtaaacact 1232 Query: 566 aatttgcagccttgcagtacttcctgccgtaccctcttgattacctgtcttacatcccgt 625 | |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1231 agtttgcagccttgaagtacttcctgccgtaccctcttgatcacctgtcttacatcccgt 1172 Query: 626 gaagaaagag 635 |||||||||| Sbjct: 1171 gaagaaagag 1162
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 123 bits (62), Expect = 8e-25 Identities = 230/286 (80%) Strand = Plus / Minus Query: 326 aaatcttcctcctgctgccgatgccaccggaaattcgaggcttcaatccagcgggggtgg 385 ||||| ||||| || ||||| ||||| |||||||| | ||| |||||||||||||||||| Sbjct: 18788599 aaatcctcctcttgttgccgttgccatcggaaatttgcggcctcaatccagcgggggtgg 18788540 Query: 386 accaggatcttgttgttcttaactgcccaacgggctttatctgttccaacatccacagcg 445 |||| | ||| ||||| |||| ||||| || || || || ||||| | ||||| ||| Sbjct: 18788539 accaaaaacttcttgttactaacagcccagcgagccttctccgttcctagatccaaagca 18788480 Query: 446 acaacatgggtgattgttgaatccacgtccgcagagcaaatggctcccagctgctcagcc 505 ||||||||||||| || |||||||| || | |||||| ||| |||| |||||| ||| Sbjct: 18788479 acaacatgggtgaccgtagaatccacatctgtgcagcaaacggcacccaactgctcggcc 18788420 Query: 506 atcttccagataaactgatcctgtgggcgagaactggacgggaagacccgactgaagact 565 ||||||||||| | |||||| ||| |||| | ||||||| || || | || ||| Sbjct: 18788419 atcttccagatcatctgatcttgttggcgctgatgtaacgggaatacacgcgtaaacact 18788360 Query: 566 aatttgcagccttgcagtacttcctgccgtaccctcttgattacct 611 | |||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 18788359 agtttgcagccttgaagtacttcctgccgtaccctcttgatcacct 18788314 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 607 tacctgtcttacatcccgtgaagaaagag 635 ||||||||||||||||||||||||||||| Sbjct: 18787963 tacctgtcttacatcccgtgaagaaagag 18787935 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aggcttcaatccagcggggg 382 |||||||||||||||||||| Sbjct: 23171208 aggcttcaatccagcggggg 23171189
>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07, complete sequence Length = 71145 Score = 123 bits (62), Expect = 8e-25 Identities = 230/286 (80%) Strand = Plus / Minus Query: 326 aaatcttcctcctgctgccgatgccaccggaaattcgaggcttcaatccagcgggggtgg 385 ||||| ||||| || ||||| ||||| |||||||| | ||| |||||||||||||||||| Sbjct: 10965 aaatcctcctcttgttgccgttgccatcggaaatttgcggcctcaatccagcgggggtgg 10906 Query: 386 accaggatcttgttgttcttaactgcccaacgggctttatctgttccaacatccacagcg 445 |||| | ||| ||||| |||| ||||| || || || || ||||| | ||||| ||| Sbjct: 10905 accaaaaacttcttgttactaacagcccagcgagccttctccgttcctagatccaaagca 10846 Query: 446 acaacatgggtgattgttgaatccacgtccgcagagcaaatggctcccagctgctcagcc 505 ||||||||||||| || |||||||| || | |||||| ||| |||| |||||| ||| Sbjct: 10845 acaacatgggtgaccgtagaatccacatctgtgcagcaaacggcacccaactgctcggcc 10786 Query: 506 atcttccagataaactgatcctgtgggcgagaactggacgggaagacccgactgaagact 565 ||||||||||| | |||||| ||| |||| | ||||||| || || | || ||| Sbjct: 10785 atcttccagatcatctgatcttgttggcgctgatgtaacgggaatacacgcgtaaacact 10726 Query: 566 aatttgcagccttgcagtacttcctgccgtaccctcttgattacct 611 | |||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 10725 agtttgcagccttgaagtacttcctgccgtaccctcttgatcacct 10680 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 607 tacctgtcttacatcccgtgaagaaagag 635 ||||||||||||||||||||||||||||| Sbjct: 10329 tacctgtcttacatcccgtgaagaaagag 10301
>ref|XM_475189.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 121 bits (61), Expect = 3e-24 Identities = 226/281 (80%) Strand = Plus / Minus Query: 326 aaatcttcctcctgctgccgatgccaccggaaattcgaggcttcaatccagcgggggtgg 385 ||||| ||||| || ||||| ||||| |||||||| | ||| |||||||||||||||||| Sbjct: 1457 aaatcctcctcttgttgccgttgccatcggaaatttgcggcctcaatccagcgggggtgg 1398 Query: 386 accaggatcttgttgttcttaactgcccaacgggctttatctgttccaacatccacagcg 445 |||| | ||| ||||| |||| ||||| || || || || ||||| | ||||| ||| Sbjct: 1397 accaaaaacttcttgttactaacagcccagcgagccttctccgttcctagatccaaagca 1338 Query: 446 acaacatgggtgattgttgaatccacgtccgcagagcaaatggctcccagctgctcagcc 505 ||||||||||||| || |||||||| || | |||||| ||| |||| |||||| ||| Sbjct: 1337 acaacatgggtgaccgtagaatccacatctgtgcagcaaacggcacccaactgctcggcc 1278 Query: 506 atcttccagataaactgatcctgtgggcgagaactggacgggaagacccgactgaagact 565 ||||||||||| | |||||| ||| |||| | ||||||| || || | || ||| Sbjct: 1277 atcttccagatcatctgatcttgttggcgctgatgtaacgggaatacacgcgtaaacact 1218 Query: 566 aatttgcagccttgcagtacttcctgccgtaccctcttgat 606 | |||||||||||| |||||||||||||||||||||||||| Sbjct: 1217 agtttgcagccttgaagtacttcctgccgtaccctcttgat 1177
>gb|AY109303.1| Zea mays PCO126243 mRNA sequence Length = 575 Score = 83.8 bits (42), Expect = 7e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 326 aaatcttcctcctgctgccgatgccaccggaaattcgaggcttcaatccagcgggggtgg 385 |||||||||||| | |||| ||||||||||||||| | |||||||||||||| |||||| Sbjct: 160 aaatcttcctccggttgcctatgccaccggaaatttgctgcttcaatccagcgtgggtgg 101 Query: 386 accaggatcttgttgttcttaactgcccaacgggctttatctgttccaacatccacag 443 |||| || ||| ||||| |||| |||| ||||| || |||||||| | |||||||| Sbjct: 100 accaagaacttcttgttgttaagaccccagcgggccttctctgttcccagatccacag 43
>gb|AC005041.2|AC005041 Homo sapiens BAC clone RP11-523H20 from Ch2, complete sequence Length = 191356 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 283 atcattttccttgtccttttcattcttcttt 313 |||||||||||||||| ||||||||||||| Sbjct: 163397 atcattttccttgtccccttcattcttcttt 163427
>gb|AF064205.1|HSDCTN1A3 Homo sapiens dynactin 1 (DCTN1) gene, alternatively spliced products, exons 7 through 32 and complete cds Length = 12426 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 283 atcattttccttgtccttttcattcttcttt 313 |||||||||||||||| ||||||||||||| Sbjct: 1662 atcattttccttgtccccttcattcttcttt 1692
>dbj|AB209625.1| Homo sapiens mRNA for dynactin 1 isoform 1 variant protein Length = 5415 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 283 atcattttccttgtccttttcattcttcttt 313 |||||||||||||||| ||||||||||||| Sbjct: 141 atcattttccttgtccccttcattcttcttt 171
>ref|NM_020932.1| Homo sapiens melanoma antigen family E, 1 (MAGEE1), mRNA Length = 3628 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 76 tggcagcagcagcaacatcatt 97
>gb|AC145506.1| Dasypus novemcinctus clone VMRC5-10C22, complete sequence Length = 123846 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 tcattttccttgtccttttcat 305 |||||||||||||||||||||| Sbjct: 39698 tcattttccttgtccttttcat 39719
>emb|AL096827.3|HSDJ596C3 Human DNA sequence from clone RP4-596C3 on chromosome Xq13.2-21.2 Contains the gene for hepatocellular carcinoma-associated protein HCA1 (KIAA1587) and a CpG island, complete sequence Length = 123846 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 103178 tggcagcagcagcaacatcatt 103157
>emb|AL683873.14| Mouse DNA sequence from clone RP23-119G22 on chromosome 13 Contains part of a novel gene, complete sequence Length = 104602 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 109 atcagtgacagcagcagcaaca 130 |||||||||||||||||||||| Sbjct: 8175 atcagtgacagcagcagcaaca 8196
>gb|AF490507.1| Homo sapiens hepatocellular carcinoma-associated protein HCA1 mRNA, complete cds Length = 3628 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 76 tggcagcagcagcaacatcatt 97
>dbj|AB060233.1| Macaca fascicularis brain cDNA clone:QflA-10248, similar to human melanoma antigen family E 1 (MAGEE1), mRNA, NM_020932.1 Length = 3674 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 115 tggcagcagcagcaacatcatt 136
>emb|AL831774.17| Mouse DNA sequence from clone RP23-301P13 on chromosome 4, complete sequence Length = 163802 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 agcagtggcagcaggagcaaca 181 |||||||||||||||||||||| Sbjct: 37249 agcagtggcagcaggagcaaca 37270
>gb|BC050588.1| Homo sapiens melanoma antigen family E, 1, mRNA (cDNA clone MGC:57856 IMAGE:6189864), complete cds Length = 3595 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 28 tggcagcagcagcaacatcatt 49
>gb|AY449461.1| Oikopleura dioica clone BACOIKO005 4xj24, complete sequence Length = 95978 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 tccttttctttcgctggagcag 164 |||||||||||||||||||||| Sbjct: 63000 tccttttctttcgctggagcag 63021
>dbj|AB046807.1| Homo sapiens mRNA for KIAA1587 protein, partial cds Length = 3628 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcatt 288 |||||||||||||||||||||| Sbjct: 76 tggcagcagcagcaacatcatt 97
>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence Length = 241576 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 ctggattagtggcagcagcag 278 ||||||||||||||||||||| Sbjct: 241363 ctggattagtggcagcagcag 241383
>ref|XM_756556.1| Ustilago maydis 521 hypothetical protein (UM05502.1) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 caacatccacagcgacaacat 452 ||||||||||||||||||||| Sbjct: 110 caacatccacagcgacaacat 130
>gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome 9, complete sequence Length = 148263 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 133 gttttctttatccttttctttcgctggag 161 |||||| |||||||||||||| ||||||| Sbjct: 72975 gttttccttatccttttctttggctggag 73003
>emb|Z81551.1|CEF56A12 Caenorhabditis elegans Cosmid F56A12, complete sequence Length = 26028 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 cagctgctcagccatcttcca 513 ||||||||||||||||||||| Sbjct: 18993 cagctgctcagccatcttcca 18973
>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the gene for a novel protein (containing KIAA0082, FLJ22156 and FLJ20341), three novel genes, the gene for a novel protein and three CpG islands, complete sequence Length = 162451 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cagtgacagcagcagcaacac 131 ||||||||||||||||||||| Sbjct: 77999 cagtgacagcagcagcaacac 78019
>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5, complete sequence Length = 168673 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 aattaatccccttaaaacatg 71 ||||||||||||||||||||| Sbjct: 23679 aattaatccccttaaaacatg 23659
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence Length = 215502 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ttttctttatccttttctttc 154 ||||||||||||||||||||| Sbjct: 6669 ttttctttatccttttctttc 6689
>emb|AL805942.5| Mouse DNA sequence from clone RP24-71G5 on chromosome 2, complete sequence Length = 81209 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 ttccttgtccttttcattcttcttt 313 |||||| |||||||||||||||||| Sbjct: 39421 ttccttctccttttcattcttcttt 39445
>gb|AC073367.11| Homo sapiens chromosome 10 clone RP11-197M22, complete sequence Length = 168920 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 287 ttttccttgtccttttcattcttctttaccttt 319 |||||||| |||||||| || |||||||||||| Sbjct: 150133 ttttccttttccttttcctttttctttaccttt 150101
>gb|AC010455.5| Homo sapiens chromosome 5 clone CTD-2255G13, complete sequence Length = 112672 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ttttctttatccttttctttc 154 ||||||||||||||||||||| Sbjct: 80743 ttttctttatccttttctttc 80763
>gb|AC025452.5| Homo sapiens chromosome 5 clone CTD-2145D4, complete sequence Length = 170195 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ttttctttatccttttctttc 154 ||||||||||||||||||||| Sbjct: 21637 ttttctttatccttttctttc 21657
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cagtgacagcagcagcaacac 131 ||||||||||||||||||||| Sbjct: 1090915 cagtgacagcagcagcaacac 1090895
>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete sequence Length = 176872 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 gttttctttatccttttctttcgct 157 ||||||||||| ||||||||||||| Sbjct: 6458 gttttctttattcttttctttcgct 6482
>ref|NM_074163.2| Caenorhabditis elegans F56A12.2 (F56A12.2) mRNA, complete cds Length = 1282 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 cagctgctcagccatcttcca 513 ||||||||||||||||||||| Sbjct: 482 cagctgctcagccatcttcca 502
>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence Length = 218664 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 133 gttttctttatccttttctttcgctggag 161 |||||| |||||||||||||| ||||||| Sbjct: 13229 gttttccttatccttttctttggctggag 13201
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 tggcagcagcagcaacatcat 287 ||||||||||||||||||||| Sbjct: 96844 tggcagcagcagcaacatcat 96864 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agcagcagcaacatcatctt 239 |||||||||||||||||||| Sbjct: 96848 agcagcagcaacatcatctt 96867
>ref|NM_211263.1| Eremothecium gossypii AFR361Cp (AFR361C), mRNA Length = 1692 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cagtgacagcagcagcaacac 131 ||||||||||||||||||||| Sbjct: 1527 cagtgacagcagcagcaacac 1547
>dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-183A22, complete sequence Length = 159441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 ccaggatcttgttgttcttaa 407 ||||||||||||||||||||| Sbjct: 152538 ccaggatcttgttgttcttaa 152518
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ttttctttatccttttctttc 154 ||||||||||||||||||||| Sbjct: 110561 ttttctttatccttttctttc 110541
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ttttccttgtccttttcattc 307 ||||||||||||||||||||| Sbjct: 368462 ttttccttgtccttttcattc 368442
>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence Length = 179585 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 cagcagcaacatcattttcct 293 ||||||||||||||||||||| Sbjct: 101183 cagcagcaacatcattttcct 101203
>gb|AC164977.2| Mus musculus BAC clone RP23-446B6 from chromosome 14, complete sequence Length = 179146 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 ctggattagtggcagcagcag 278 ||||||||||||||||||||| Sbjct: 70872 ctggattagtggcagcagcag 70852
>gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete sequence Length = 159930 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 74736 ggagcagcagcaacatcatc 74717
>gb|AC152949.1| Mus musculus 10 BAC RP23-184H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206898 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcttatgagttcgctgaatc 111 |||||||||||||||||||| Sbjct: 125146 tcttatgagttcgctgaatc 125165
>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence Length = 199086 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ggctcccagctgctcagcca 506 |||||||||||||||||||| Sbjct: 104387 ggctcccagctgctcagcca 104368
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence Length = 172348 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cagagggagcagcagcaaca 232 |||||||||||||||||||| Sbjct: 108118 cagagggagcagcagcaaca 108099
>gb|AC151801.1| Solanum demissum chromosome 11 clone PGEC591C22 map MAP_LOC, complete sequence Length = 147506 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 attttccttgtccttttcat 305 |||||||||||||||||||| Sbjct: 79097 attttccttgtccttttcat 79116
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aggcttcaatccagcggggg 382 |||||||||||||||||||| Sbjct: 102983 aggcttcaatccagcggggg 102964
>gb|AC183538.4| Pan troglodytes BAC clone CH251-395P17 from chromosome x, complete sequence Length = 186120 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ggaccaggatcttgttgttc 403 |||||||||||||||||||| Sbjct: 87442 ggaccaggatcttgttgttc 87423
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome Length = 1545895 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tttcattcttctttaccttt 319 |||||||||||||||||||| Sbjct: 1138799 tttcattcttctttaccttt 1138818
>gb|AC132604.4| Mus musculus BAC clone RP24-80P7 from chromosome 13, complete sequence Length = 164377 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 tccttttcattcttctttaccttt 319 |||||||||||||||||| ||||| Sbjct: 73198 tccttttcattcttctttcccttt 73221
>gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, complete sequence Length = 227319 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cagagggagcagcagcaaca 232 |||||||||||||||||||| Sbjct: 43594 cagagggagcagcagcaaca 43575
>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence Length = 186561 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 atcagtgacagcagcagcaacacc 132 |||||| ||||||||||||||||| Sbjct: 48534 atcagtcacagcagcagcaacacc 48557
>ref|XR_003865.1| PREDICTED: Mus musculus similar to G patch domain containing 4 (LOC233614), mRNA Length = 984 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 atcagtgacagcagcagcaacacc 132 |||||| ||||||||||||||||| Sbjct: 49 atcagtcacagcagcagcaacacc 72
>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24, complete sequence Length = 120376 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ccttgtccttttcattcttc 310 |||||||||||||||||||| Sbjct: 43346 ccttgtccttttcattcttc 43365
>gb|AC124410.4| Mus musculus BAC clone RP24-266J11 from chromosome 7, complete sequence Length = 162876 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 atcagtgacagcagcagcaacacc 132 |||||| ||||||||||||||||| Sbjct: 17279 atcagtcacagcagcagcaacacc 17256
>ref|XM_644721.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (268.t00004) partial mRNA Length = 2793 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 cttctttatcattttcattcgctg 209 ||||||||||||||||||| |||| Sbjct: 1600 cttctttatcattttcattagctg 1577
>ref|XM_718843.1| Plasmodium yoelii yoelii str. 17XNL tRNA-guaninine transglycosylase (PY03738) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tcttctttatcattttcatt 204 |||||||||||||||||||| Sbjct: 791 tcttctttatcattttcatt 772
>ref|XM_732459.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301128.00.0) partial mRNA Length = 990 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 atcgtcttctttatcattttcatt 204 |||||||| ||||||||||||||| Sbjct: 405 atcgtcttttttatcattttcatt 382
>ref|XM_733749.1| Plasmodium chabaudi chabaudi ubiquitin carboxyl-terminal hydrolase (PC000091.04.0) partial mRNA Length = 876 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tcttctttatcattttcatt 204 |||||||||||||||||||| Sbjct: 230 tcttctttatcattttcatt 211
>gb|AC134392.5| Mus musculus chromosome 16, clone RP24-346N12, complete sequence Length = 170666 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aaaacatgtacttaacccat 83 |||||||||||||||||||| Sbjct: 96064 aaaacatgtacttaacccat 96083
>gb|DQ062243.1| Streptococcus downei serotype h GroES (groES) gene, complete cds; and GroEL (groEL) gene, partial cds Length = 2190 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 gaaagagcagtttcaacagc 648 |||||||||||||||||||| Sbjct: 971 gaaagagcagtttcaacagc 990
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3 Contains a ribosomal protein L36a (RPL36A) pseudogene, complete sequence Length = 123556 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ggaccaggatcttgttgttc 403 |||||||||||||||||||| Sbjct: 73726 ggaccaggatcttgttgttc 73745
>emb|AL627303.17| Human DNA sequence from clone RP11-770B5 on chromosome 9 Contains part of the PBX3 gene for pre-B-cell leukemia transcription factor 3, complete sequence Length = 70193 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ttttctttatccttttcttt 153 |||||||||||||||||||| Sbjct: 59001 ttttctttatccttttcttt 59020
>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an ADP-ribosylation factor pseudogene, complete sequence Length = 178914 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 agagggagcagcagcaacat 233 |||||||||||||||||||| Sbjct: 152908 agagggagcagcagcaacat 152889
>ref|XM_501660.1| Yarrowia lipolytica CLIB122, YALI0C09904g predicted mRNA Length = 3828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cagtgacagcagcagcaaca 130 |||||||||||||||||||| Sbjct: 1996 cagtgacagcagcagcaaca 1977
>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tttcattcttctttaccttt 319 |||||||||||||||||||| Sbjct: 152502 tttcattcttctttaccttt 152483
>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains part of the MPDZ gene for multiple PDZ domain protein and GSSs, complete sequence Length = 103822 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tccttgtccttttcattctt 309 |||||||||||||||||||| Sbjct: 64670 tccttgtccttttcattctt 64651
>emb|AL160273.9| Human DNA sequence from clone RP11-366I5 on chromosome 9, complete sequence Length = 159934 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 cttgtccttttcattcttct 311 |||||||||||||||||||| Sbjct: 115677 cttgtccttttcattcttct 115658
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3 Contains a NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a novel gene, complete sequence Length = 213084 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ggaccaggatcttgttgttc 403 |||||||||||||||||||| Sbjct: 73369 ggaccaggatcttgttgttc 73350
>emb|AL023592.1|SPCC550 S.pombe chromosome III cosmid c550 Length = 38475 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tttctttatccttttctttc 154 |||||||||||||||||||| Sbjct: 8352 tttctttatccttttctttc 8333
>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence Length = 247161 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tagtggcagcagcagcaaca 283 |||||||||||||||||||| Sbjct: 34385 tagtggcagcagcagcaaca 34404
>emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 2/10 Length = 313050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gctggagcagtggcagcagg 174 |||||||||||||||||||| Sbjct: 213300 gctggagcagtggcagcagg 213319
>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence Length = 214196 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tagtggcagcagcagcaaca 283 |||||||||||||||||||| Sbjct: 92869 tagtggcagcagcagcaaca 92888
>emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chromosome 13 Contains part of a novel gene (6620401C13Rik), complete sequence Length = 199848 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 cagctgctcagccatcttccagat 516 |||||||||||||||||| ||||| Sbjct: 130782 cagctgctcagccatcttgcagat 130759
>emb|AL670939.6| Mouse DNA sequence from clone RP23-59O12 on chromosome 4 Contains the 3' end of the Mpdz gene for multiple PDZ domain protein, complete sequence Length = 180629 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tttctttatccttttctttc 154 |||||||||||||||||||| Sbjct: 145529 tttctttatccttttctttc 145510
>gb|AC092124.2| Homo sapiens chromosome 16 clone RP11-1079H2, complete sequence Length = 197992 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ttttctttatccttttcttt 153 |||||||||||||||||||| Sbjct: 136437 ttttctttatccttttcttt 136456
>gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135514 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tttcattcttctttaccttt 319 |||||||||||||||||||| Sbjct: 112990 tttcattcttctttaccttt 113009
>gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, complete sequence Length = 157587 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 atcatcttgtttatcctttt 251 |||||||||||||||||||| Sbjct: 39546 atcatcttgtttatcctttt 39527
>gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, complete sequence Length = 163931 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 atcatcttgtttatcctttt 251 |||||||||||||||||||| Sbjct: 152135 atcatcttgtttatcctttt 152154
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 taatccccttaaaacatgta 73 |||||||||||||||||||| Sbjct: 243307 taatccccttaaaacatgta 243288
>gb|AC091843.3| Homo sapiens chromosome 5 clone CTD-2185O23, complete sequence Length = 177056 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 281 acatcattttccttgtccttttcattcttctt 312 |||||||||||||| ||||||| ||||||||| Sbjct: 145321 acatcattttccttttcctttt-attcttctt 145291
>gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agcagcagcaacatcatctt 239 |||||||||||||||||||| Sbjct: 66388 agcagcagcaacatcatctt 66407
>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence Length = 152232 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gttttctttatccttttctt 152 |||||||||||||||||||| Sbjct: 23696 gttttctttatccttttctt 23677
>gb|AC010928.7|AC010928 Homo sapiens chromosome 18, clone RP11-325K19, complete sequence Length = 213552 Score = 40.1 bits (20), Expect = 8.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 281 acatcattttccttgtccttttcattcttctt 312 |||||||||||||| ||||||| ||||||||| Sbjct: 148946 acatcattttccttttcctttt-attcttctt 148976
>gb|AC092243.1|AC092243 Drosophila melanogaster, chromosome 2L, region 34D-34E, BAC clone BACR09N24, complete sequence Length = 158758 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agtggcagcagcagcaacat 284 |||||||||||||||||||| Sbjct: 13708 agtggcagcagcagcaacat 13689
>gb|AC092225.1|AC092225 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR18J08, complete sequence Length = 186803 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agtggcagcagcagcaacat 284 |||||||||||||||||||| Sbjct: 159118 agtggcagcagcagcaacat 159099
>ref|XM_624999.1| PREDICTED: Apis mellifera similar to hypothetical protein LOC55684 (LOC552625), mRNA Length = 2110 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ttttctttatccttttcttt 153 |||||||||||||||||||| Sbjct: 1971 ttttctttatccttttcttt 1952
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 atcattttccttgtccttttcatt 306 |||||||||||||||||| ||||| Sbjct: 14479620 atcattttccttgtccttctcatt 14479597
>gb|AC007825.6|AC007825 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR13F13, complete sequence Length = 179171 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 85948 ggagcagcagcaacatcatc 85929
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcagcagcagcaacatcatt 288 |||||||||||||||||||| Sbjct: 134845 gcagcagcagcaacatcatt 134864
>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR22N13, complete sequence Length = 177376 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 165144 ggagcagcagcaacatcatc 165125
>gb|AF152850.1|AF152848S3 Mus platythrix TSPY gene, intron 5 Length = 648 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 ttccttgtccttttcattcttctt 312 |||||||| ||||||||||||||| Sbjct: 183 ttccttgtacttttcattcttctt 206
>gb|AC079150.3| Homo sapiens BAC clone RP11-155F11 from 2, complete sequence Length = 174782 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gagcagtggcagcaggagca 178 |||||||||||||||||||| Sbjct: 9764 gagcagtggcagcaggagca 9745
>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19, complete sequence Length = 181789 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caacaccgttttctttatcc 145 |||||||||||||||||||| Sbjct: 2086 caacaccgttttctttatcc 2067
>emb|BX005307.12| Zebrafish DNA sequence from clone DKEY-235F19 in linkage group 6, complete sequence Length = 200462 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caacaccgttttctttatcc 145 |||||||||||||||||||| Sbjct: 102911 caacaccgttttctttatcc 102892
>gb|AC104061.5| Homo sapiens BAC clone RP11-5E24 from 2, complete sequence Length = 49373 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gagcagtggcagcaggagca 178 |||||||||||||||||||| Sbjct: 34598 gagcagtggcagcaggagca 34579
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gcaacatcatcttgtttatc 246 |||||||||||||||||||| Sbjct: 98003 gcaacatcatcttgtttatc 98022
>emb|BX072574.7| Zebrafish DNA sequence from clone DKEY-27P21 in linkage group 5, complete sequence Length = 140410 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aaacgtttaattaatcccct 62 |||||||||||||||||||| Sbjct: 100886 aaacgtttaattaatcccct 100905
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 atcattttccttgtccttttcatt 306 |||||||||||||||||| ||||| Sbjct: 79185 atcattttccttgtccttctcatt 79162
>emb|AL606834.1|CNS07EGV Human chromosome 14 DNA sequence BAC R-248J18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179138 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gttttctttatccttttctt 152 |||||||||||||||||||| Sbjct: 49873 gttttctttatccttttctt 49892
>gb|AY779922.1| Drosophila simulans strain sim6 enhancer of split complex, complete sequence Length = 47037 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38012 ggagcagcagcaacatcatc 37993
>gb|AY779921.1| Drosophila melanogaster strain NVIII-m19 enhancer of split complex, complete sequence Length = 47225 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38110 ggagcagcagcaacatcatc 38091
>gb|AY779920.1| Drosophila melanogaster strain NVIII-m15 enhancer of split complex, complete sequence Length = 47170 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38121 ggagcagcagcaacatcatc 38102
>gb|AY779919.1| Drosophila melanogaster strain NVIII-m13 enhancer of split complex, complete sequence Length = 47206 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38139 ggagcagcagcaacatcatc 38120
>gb|AY779918.1| Drosophila melanogaster strain NVIII-m12 enhancer of split complex, complete sequence Length = 47215 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38107 ggagcagcagcaacatcatc 38088
>gb|AY779917.1| Drosophila melanogaster strain NVIII-m11 enhancer of split complex, complete sequence Length = 47170 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38136 ggagcagcagcaacatcatc 38117
>gb|AY779915.1| Drosophila melanogaster strain NVIII-42 enhancer of split complex, complete sequence Length = 47220 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38144 ggagcagcagcaacatcatc 38125
>gb|AY779914.1| Drosophila melanogaster strain NVIII-41 enhancer of split complex, complete sequence Length = 47276 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38158 ggagcagcagcaacatcatc 38139
>gb|AY779913.1| Drosophila melanogaster strain NVIII-28 enhancer of split complex, complete sequence Length = 47237 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38140 ggagcagcagcaacatcatc 38121
>gb|AY779912.1| Drosophila melanogaster strain NVIII-24 enhancer of split complex, complete sequence Length = 47222 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38152 ggagcagcagcaacatcatc 38133
>gb|AY779911.1| Drosophila melanogaster strain NVIII-22 enhancer of split complex, complete sequence Length = 46481 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38137 ggagcagcagcaacatcatc 38118
>gb|AY779910.1| Drosophila melanogaster strain NVIII-18 enhancer of split complex, complete sequence Length = 47270 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38141 ggagcagcagcaacatcatc 38122
>gb|AY779908.1| Drosophila melanogaster strain NVIII-5 enhancer of split complex, complete sequence Length = 47211 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38158 ggagcagcagcaacatcatc 38139
>gb|AY779907.1| Drosophila melanogaster strain NVIII-2 enhancer of split complex, complete sequence Length = 47173 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38082 ggagcagcagcaacatcatc 38063
>gb|AY779906.1| Drosophila melanogaster strain NVIII-1 enhancer of split complex, complete sequence Length = 46440 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 38105 ggagcagcagcaacatcatc 38086
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 gtggcagcagcagcaacatc 285 |||||||||||||||||||| Sbjct: 14649 gtggcagcagcagcaacatc 14630
>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the complete sequence Length = 214365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 144768 ggagcagcagcaacatcatc 144749
>gb|AE003642.3| Drosophila melanogaster chromosome 2L, section 51 of 83 of the complete sequence Length = 276521 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 agtggcagcagcagcaacat 284 |||||||||||||||||||| Sbjct: 104527 agtggcagcagcagcaacat 104546
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcagcagcagcaacatcatt 288 |||||||||||||||||||| Sbjct: 151500 gcagcagcagcaacatcatt 151519
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 314211 ggagcagcagcaacatcatc 314230
>gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, complete sequence Length = 196303 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agcagcagcaacatcatctt 239 |||||||||||||||||||| Sbjct: 156607 agcagcagcaacatcatctt 156626
>gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, complete sequence Length = 222700 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gctggagcagtggcagcaggagca 178 |||| ||||||||||||||||||| Sbjct: 128351 gctgcagcagtggcagcaggagca 128328
>gb|AC122545.13| Mus musculus chromosome 5, clone RP23-324H16, complete sequence Length = 202586 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 cagccatcttccagataaac 520 |||||||||||||||||||| Sbjct: 153394 cagccatcttccagataaac 153413
>emb|CT030640.9| Mouse DNA sequence from clone RP24-78F21 on chromosome 9, complete sequence Length = 225365 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 ttttccttgtccttttcattcttc 310 |||||||| ||||||||||||||| Sbjct: 201905 ttttccttttccttttcattcttc 201928
>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794 Length = 474727 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acttaacccattgtgtgtat 92 |||||||||||||||||||| Sbjct: 17252 acttaacccattgtgtgtat 17271
>emb|BX001057.4| Zebrafish DNA sequence from clone CH211-89G13 in linkage group 1, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caacaccgttttctttatcc 145 |||||||||||||||||||| Sbjct: 174365 caacaccgttttctttatcc 174346
>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence Length = 194685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ggctcccagctgctcagcca 506 |||||||||||||||||||| Sbjct: 8056 ggctcccagctgctcagcca 8037
>gb|U82548.1|PFU82548 Plasmodium falciparum asparagine-rich protein gene, partial cds Length = 1837 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tttcattcttctttaccttt 319 |||||||||||||||||||| Sbjct: 671 tttcattcttctttaccttt 690
>emb|CT009565.10| M.truncatula DNA sequence from clone MTH2-173F9 on chromosome 3, complete sequence Length = 151325 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cagcagcagcaacaccgttt 136 |||||||||||||||||||| Sbjct: 14316 cagcagcagcaacaccgttt 14335
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagtgacagcagcagcaaca 130 |||||||||||||||||||| Sbjct: 1359169 cagtgacagcagcagcaaca 1359188
>emb|AJ012204.1|DME012204 Drosophila melanogaster E(spl)m6 gene Length = 1533 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagcagcagcaacatcatc 237 |||||||||||||||||||| Sbjct: 279 ggagcagcagcaacatcatc 260
>emb|AL732447.9| Mouse DNA sequence from clone RP23-142F14 on chromosome 2, complete sequence Length = 154433 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tagtggcagcagcagcaaca 283 |||||||||||||||||||| Sbjct: 50262 tagtggcagcagcagcaaca 50243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,933,007 Number of Sequences: 3902068 Number of extensions: 7933007 Number of successful extensions: 262691 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 261511 Number of HSP's gapped (non-prelim): 1178 length of query: 654 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 631 effective length of database: 17,143,297,704 effective search space: 10817420851224 effective search space used: 10817420851224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
