| Clone Name | rbags23k14 |
|---|---|
| Clone Library Name | barley_pub |
>VILI3_ARATH (O81645) Villin-3| Length = 966 Score = 85.9 bits (211), Expect = 1e-16 Identities = 39/61 (63%), Positives = 50/61 (81%) Frame = -2 Query: 603 TFSYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADL 424 TF+Y+RL +KS P+ GID+KRREAYLSE EF+TVFG+ K+ FY PGWKQ+L K+K +L Sbjct: 906 TFTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNL 965 Query: 423 F 421 F Sbjct: 966 F 966
>VILI2_ARATH (O81644) Villin-2| Length = 976 Score = 84.7 bits (208), Expect = 2e-16 Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 7/77 (9%) Frame = -2 Query: 630 QTTEHVGE-------ATFSYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFY 472 Q TE G+ ATF+Y++L +KS +P+ GID+KRREAYLSE EFQ+VFG+ K+ F Sbjct: 900 QETEEQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFN 959 Query: 471 LQPGWKQELQKRKADLF 421 P WKQ+L K+K DLF Sbjct: 960 NLPRWKQDLLKKKFDLF 976
>VILI4_ARATH (O65570) Villin-4| Length = 974 Score = 66.6 bits (161), Expect = 7e-11 Identities = 32/58 (55%), Positives = 37/58 (63%) Frame = -2 Query: 594 YDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 YDRL + STDP+ ID RREAYLS EF+ FG+TK+ FY P WKQ K LF Sbjct: 917 YDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 974
>VILI1_ARATH (O81643) Villin-1| Length = 910 Score = 56.6 bits (135), Expect = 7e-08 Identities = 28/60 (46%), Positives = 35/60 (58%) Frame = -2 Query: 600 FSYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 +SY++L S P+ ID RREAYL+E EF+ FG+ K FY P WKQ K LF Sbjct: 851 YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 910
>VILI_CHICK (P02640) Villin-1| Length = 826 Score = 50.4 bits (119), Expect = 5e-06 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Frame = -2 Query: 603 TFSYDRLISKSTDPI-RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKAD 427 TF D L++ + + + RG+D R+E +LS+ +F+ VFG+T+ F P WKQ+ K++ Sbjct: 765 TFPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKG 824 Query: 426 LF 421 LF Sbjct: 825 LF 826
>VILL_MOUSE (Q91YD6) Villin-like protein (EF-6)| Length = 859 Score = 50.1 bits (118), Expect = 7e-06 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = -2 Query: 591 DRLISKSTDPIR-GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 +RL+ ++ + + G+D R+E YLS+S+FQ +FG +K+ FY WKQ+ K+K F Sbjct: 802 ERLMHQALEDLPPGVDPARKEFYLSDSDFQDIFGKSKEEFYSMAKWKQQQAKKKLGFF 859
>VILL_HUMAN (O15195) Villin-like protein| Length = 856 Score = 48.5 bits (114), Expect = 2e-05 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D RRE YLS+S+FQ +FG +K+ FY W+Q +K++ F Sbjct: 812 GVDPARREFYLSDSDFQDIFGKSKEEFYSMATWRQRQEKKQLGFF 856
>VILI_MOUSE (Q62468) Villin-1| Length = 826 Score = 45.4 bits (106), Expect = 2e-04 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = -2 Query: 603 TFSYDRLISKSTDPI-RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKAD 427 TF ++L++KS + + G+D R+E +LS +F G+T F P WKQ+ K++ Sbjct: 765 TFPLEQLVNKSVEDLPEGVDPSRKEEHLSTEDFTRALGMTPAAFSALPRWKQQNIKKEKG 824 Query: 426 LF 421 LF Sbjct: 825 LF 826
>AVIL_MOUSE (O88398) Advillin (p92) (Actin-binding protein DOC6)| Length = 819 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -2 Query: 552 IDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 +D ++E YLSE +F +VFG+T+ F PGWK+ KR+ LF Sbjct: 776 VDPAKKENYLSEQDFVSVFGITRGQFTALPGWKRLQLKRERGLF 819
>AVIL_HUMAN (O75366) Advillin (p92)| Length = 819 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/40 (47%), Positives = 27/40 (67%) Frame = -2 Query: 540 RREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 ++E YLSE +F +VFG+T+ F PGWKQ K++ LF Sbjct: 780 KKENYLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 819
>VILI_HUMAN (P09327) Villin-1| Length = 826 Score = 43.5 bits (101), Expect = 6e-04 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Frame = -2 Query: 600 FSYDRLISKSTDPI-RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADL 424 F ++L++K + + G+D R+E +LS +F FG+T F P WKQ+ K++ L Sbjct: 766 FPLEQLVNKPVEELPEGVDPSRKEEHLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGL 825 Query: 423 F 421 F Sbjct: 826 F 826
>VILD_DICDI (Q8WQ85) Villidin| Length = 1704 Score = 38.9 bits (89), Expect = 0.015 Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = -2 Query: 600 FSYDRLISKSTDPI-RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADL 424 ++Y+ L++ DP+ G+D + + YL++ +F+ VF +T+ + P WK+E K++ L Sbjct: 1647 YTYEELLA---DPLPAGVDSTKLDTYLNDEDFEKVFKMTRTEWLKIPAWKREGIKKELFL 1703 Query: 423 F 421 F Sbjct: 1704 F 1704
>ABLM2_HUMAN (Q6H8Q1) Actin-binding LIM protein 2 (Actin-binding LIM protein| family member 2) (abLIM2) Length = 611 Score = 36.6 bits (83), Expect = 0.074 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = -2 Query: 600 FSYDRLISKSTDPIR---GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKA 430 + YD LI + ++ +D R E +LS EFQ VFG++ + F WK+ K+KA Sbjct: 549 YPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKA 608 Query: 429 DLF 421 LF Sbjct: 609 LLF 611
>ABLM2_RAT (Q6KC51) Actin-binding LIM protein 2 (Actin-binding LIM protein| family member 2) (abLIM2) Length = 612 Score = 36.6 bits (83), Expect = 0.074 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = -2 Query: 600 FSYDRLISKSTDPIR---GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKA 430 + YD LI + ++ +D R E +LS EFQ VFG++ + F WK+ K+KA Sbjct: 550 YPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKA 609 Query: 429 DLF 421 LF Sbjct: 610 LLF 612
>ABLM2_MOUSE (Q8BL65) Actin-binding LIM protein 2 (Actin-binding LIM protein| family member 2) (abLIM2) Length = 612 Score = 36.6 bits (83), Expect = 0.074 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = -2 Query: 600 FSYDRLISKSTDPIR---GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKA 430 + YD LI + ++ +D R E +LS EFQ VFG++ + F WK+ K+KA Sbjct: 550 YPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKA 609 Query: 429 DLF 421 LF Sbjct: 610 LLF 612
>SVIL_HUMAN (O95425) Supervillin (Archvillin) (p205/p250)| Length = 2214 Score = 35.4 bits (80), Expect = 0.17 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D + E YL++ +F+ +T+D + P WKQ K+ LF Sbjct: 2170 GVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 2214
>VILI_DICDI (P36418) Protovillin (100 kDa actin-binding protein)| Length = 959 Score = 35.0 bits (79), Expect = 0.22 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = -2 Query: 603 TFSYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADL 424 TF ++ + T+ ID YLS+ EF + F +TK++F P WK + + L Sbjct: 899 TFYPLSVLKQKTNLPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGL 958 Query: 423 F 421 F Sbjct: 959 F 959
>ABLM3_MOUSE (Q69ZX8) Actin-binding LIM protein 3 (Actin-binding LIM protein| family member 3) (abLIM3) Length = 682 Score = 35.0 bits (79), Expect = 0.22 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -2 Query: 558 RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 + +D R E +LS+ EF VFG+T F WK+ K++A LF Sbjct: 637 KDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKKQARLF 682
>SVIL_MOUSE (Q8K4L3) Supervillin (Archvillin) (p205/p250)| Length = 2170 Score = 34.7 bits (78), Expect = 0.28 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D + E YL++ +F+ +++D F P WKQ K+ LF Sbjct: 2126 GVDPLKLEIYLTDEDFEFALDMSRDEFNALPTWKQVNLKKSKGLF 2170
>DEMA_PONPY (Q5R4B6) Dematin (Erythrocyte membrane protein band 4.9)| Length = 405 Score = 34.7 bits (78), Expect = 0.28 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D R E +LS +F VF ++ + F WK+ K+KA LF Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>DEMA_MOUSE (Q9WV69) Dematin (Erythrocyte membrane protein band 4.9)| Length = 405 Score = 34.7 bits (78), Expect = 0.28 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D R E +LS +F VF ++ + F WK+ K+KA LF Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>DEMA_HUMAN (Q08495) Dematin (Erythrocyte membrane protein band 4.9)| Length = 405 Score = 34.7 bits (78), Expect = 0.28 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -2 Query: 555 GIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 G+D R E +LS +F VF ++ + F WK+ K+KA LF Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>ABLM3_HUMAN (O94929) Actin-binding LIM protein 3 (Actin-binding LIM protein| family member 3) (abLIM3) Length = 683 Score = 34.7 bits (78), Expect = 0.28 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -2 Query: 558 RGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 + +D R E +LS+ EF VFG+T F WK+ K++A LF Sbjct: 638 KDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF 683
>ABLM1_HUMAN (O14639) Actin-binding LIM protein 1 (Actin-binding LIM protein| family member 1) (abLIM-1) (Actin-binding double-zinc-finger protein) (LIMAB1) (Limatin) Length = 778 Score = 34.3 bits (77), Expect = 0.37 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 561 IRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 +R +D R E +L+ F+ +FG++ F P W++ K+KA LF Sbjct: 732 LREVDRTRLERHLAPEVFREIFGMSIQEFDRLPLWRRNDMKKKAKLF 778
>ABLM1_MOUSE (Q8K4G5) Actin-binding LIM protein 1 (Actin-binding LIM protein| family member 1) (abLIM-1) Length = 861 Score = 33.5 bits (75), Expect = 0.63 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -2 Query: 561 IRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF 421 +R +D R E +L+ F +FG++ F P W++ K+KA LF Sbjct: 815 LRDVDRTRLERHLAPEVFWEIFGMSIQEFDKLPLWRRNDMKKKAKLF 861
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 150 REKPYTYGQSQNKLEHTRTLQAAQHSTLSPCTNERMTYKIRKTN 281 REK T+ S+N E + Q AQ+ T ER+ +IR+ N Sbjct: 2108 REKEQTFSVSENSREIFHSSQVAQYKTKEELPYERILSRIRRRN 2151
>CYB_PLAFA (Q02768) Cytochrome b| Length = 376 Score = 30.4 bits (67), Expect = 5.3 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 31/121 (25%) Frame = -2 Query: 387 MRSINHMCLFLPLS-------------S*LVGTIHCWSSLCEW-----------LPVAFG 280 +R +N+ ++LPLS + VG + W + W +PVA Sbjct: 94 LRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIPVAVI 153 Query: 279 WFCEFY-------RSFFRLYMD*VCCAVLLARS*YALACFVIVHMCMVFLGLFYVHAYGQ 121 W C Y + FF L+ + +C+VF+ +F++H +G Sbjct: 154 WICGGYTVSDPTIKRFFVLHF-----------------ILPFIGLCIVFIHIFFLHLHGS 196 Query: 120 S 118 + Sbjct: 197 T 197
>IF2_PSYAR (Q4FVL5) Translation initiation factor IF-2| Length = 908 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3 Query: 102 QNIPRGTAHTHVRKTNREKPYTYGQSQNKLEHTRTLQAAQHSTLSPCTNERMTYKIRKTN 281 + I RGT+ T R R K + +N+ R+ Q+AQH P E++ Y + + Sbjct: 276 REIKRGTSSTTARGRGRRKNQDEREIKNRKNGLRSSQSAQHKFEKPV--EKIVYDVEISE 333 Query: 282 Q 284 Q Sbjct: 334 Q 334
>ADRB1_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) (Beta-T) Length = 483 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -2 Query: 339 LVGTIHCWSSLCEWLPVAFGWFCEFYRSFFRLYMD*VCCAVLLARS*YALACFVIVHMCM 160 ++ T+ S+L +LP+ W+ + + Y D CC + R+ YA+A +I Sbjct: 161 IICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA-YAIASSIISFYIP 219 Query: 159 VFLGLF-YVHAYGQS 118 + + +F Y+ Y ++ Sbjct: 220 LLIMIFVYLRVYREA 234
>OR22C_DROME (P81911) Putative odorant receptor 22c| Length = 402 Score = 30.0 bits (66), Expect = 7.0 Identities = 19/37 (51%), Positives = 23/37 (62%) Frame = -3 Query: 647 WRCQRNKQLNMLVKQHLATTA*YLNLLILSVG*TTNA 537 W +R + MLV LATTA L+LL+LS G TNA Sbjct: 112 WESRRQEAQRMLVG--LATTANRLSLLLLSSGTATNA 146
>ADRB1_PIG (Q28998) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 468 Score = 30.0 bits (66), Expect = 7.0 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Frame = -2 Query: 339 LVGTIHCWSSLCEWLPVAFGWFCEFYRSFFRLYMD*VCCAVLLARS*YALACFVI---VH 169 LV T+ S+L +LP+ W+ + R Y D CC + R+ YA+A V+ V Sbjct: 177 LVCTVWAISALVSFLPILMHWWRDKGAEARRCYNDPKCCDFVTNRA-YAIASSVVSFYVP 235 Query: 168 MCM---VFLGLF 142 +C+ V+L +F Sbjct: 236 LCIMAFVYLRVF 247
>UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +2 Query: 269 SQNQPKATGSHSHKDDQQWIVPTNHDERGKNKHI*LIDLILR--EDRKQPLIQKRSAFRF 442 S+ + KA+ H +++++ +ER + K+ +I +R DRKQ +RSAF Sbjct: 20 SRKEEKASLLHRTQEERR----KREEERRRLKNAVIIQSFIRGYRDRKQQYFIQRSAFDQ 75 Query: 443 CSSCFHPG 466 C+ PG Sbjct: 76 CTDSAQPG 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,739,249 Number of Sequences: 219361 Number of extensions: 1903750 Number of successful extensions: 4589 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4588 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)