ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23k13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 494 bits (249), Expect = e-136 Identities = 392/440 (89%) Strand = Plus / Minus Query: 257 gcagcaacggcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtca 316 |||||||| || |||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 974 gcagcaacagcgaacttgctggggtctttcaaatactccttgatcttatcagcatgtggg 915 Query: 317 tacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatg 376 |||||||| || ||||||| ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 914 tacgagtattcggtctccacagcaacagcaagcacattcttgtacccattgaggaacatg 855 Query: 377 tgcggtgcagcagccatggtggggtatgagatcgccagggacagtgaggcaaccatggaa 436 || ||||||||||| || || ||||| ||||| |||||||| | |||||||||||| ||| Sbjct: 854 tgtggtgcagcagcaatagttgggtacgagattgccagggagactgaggcaaccatagaa 795 Query: 437 acaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaagaacctcggggctg 496 ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 794 acaccagaagcaaacttctccatcaggtcatcctcagtgaggtcaagcacctcagggctg 735 Query: 497 aagactgacccactgtcatagacattgcagatgaccagtccatatgagaaggggcggata 556 ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 734 aagactgacccactgtcatagacattggtaataaccagcccatatgagaaggggcggata 675 Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||| Sbjct: 674 ccaagcttggcaagcagagcagactcggaggagcccaccttgtcacccttcttaatgagc 615 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 614 tccacaggggtgataatttccacagtacccttgttaatcttggtggggatgttaagcacc 555 Query: 677 tggaagaangacgtctggga 696 |||||||| || |||||||| Sbjct: 554 tggaagaaagaggtctggga 535 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 1061 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 1016
>dbj|D21130.1|RICYK704 Oryza sativa (japonica cultivar-group) YK704 mRNA for acidic ribosomal protein P0, complete cds Length = 1220 Score = 494 bits (249), Expect = e-136 Identities = 392/440 (89%) Strand = Plus / Minus Query: 257 gcagcaacggcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtca 316 |||||||| || |||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 956 gcagcaacagcgaacttgctggggtctttcaaatactccttgatcttatcagcatgtggg 897 Query: 317 tacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatg 376 |||||||| || ||||||| ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 896 tacgagtattcggtctccacagcaacagcaagcacattcttgtacccattgaggaacatg 837 Query: 377 tgcggtgcagcagccatggtggggtatgagatcgccagggacagtgaggcaaccatggaa 436 || ||||||||||| || || ||||| ||||| |||||||| | |||||||||||| ||| Sbjct: 836 tgtggtgcagcagcaatagttgggtacgagattgccagggagactgaggcaaccatagaa 777 Query: 437 acaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaagaacctcggggctg 496 ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 776 acaccagaagcaaacttctccatcaggtcatcctcagtgaggtcaagcacctcagggctg 717 Query: 497 aagactgacccactgtcatagacattgcagatgaccagtccatatgagaaggggcggata 556 ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 716 aagactgacccactgtcatagacattggtaataaccagcccatatgagaaggggcggata 657 Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||| Sbjct: 656 ccaagcttggcaagcagagcagactcggaggagcccaccttgtcacccttcttaatgagc 597 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 596 tccacaggggtgataatttccacagtacccttgttaatcttggtggggatgttaagcacc 537 Query: 677 tggaagaangacgtctggga 696 |||||||| || |||||||| Sbjct: 536 tggaagaaagaggtctggga 517 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 1043 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 998
>dbj|AK064857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H12, full insert sequence Length = 1236 Score = 494 bits (249), Expect = e-136 Identities = 392/440 (89%) Strand = Plus / Minus Query: 257 gcagcaacggcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtca 316 |||||||| || |||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 974 gcagcaacagcgaacttgctggggtctttcaaatactccttgatcttatcagcatgtggg 915 Query: 317 tacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatg 376 |||||||| || ||||||| ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 914 tacgagtattcggtctccacagcaacagcaagcacattcttgtacccattgaggaacatg 855 Query: 377 tgcggtgcagcagccatggtggggtatgagatcgccagggacagtgaggcaaccatggaa 436 || ||||||||||| || || ||||| ||||| |||||||| | |||||||||||| ||| Sbjct: 854 tgtggtgcagcagcaatagttgggtacgagattgccagggagactgaggcaaccatagaa 795 Query: 437 acaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaagaacctcggggctg 496 ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 794 acaccagaagcaaacttctccatcaggtcatcctcagtgaggtcaagcacctcagggctg 735 Query: 497 aagactgacccactgtcatagacattgcagatgaccagtccatatgagaaggggcggata 556 ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 734 aagactgacccactgtcatagacattggtaataaccagcccatatgagaaggggcggata 675 Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||| Sbjct: 674 ccaagcttggcaagcagagcagactcggaggagcccaccttgtcacccttcttaatgagc 615 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 614 tccacaggggtgataatttccacagtacccttgttaatcttggtggggatgttaagcacc 555 Query: 677 tggaagaangacgtctggga 696 |||||||| || |||||||| Sbjct: 554 tggaagaaagaggtctggga 535 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 1061 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 1016
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 ||||||||||||||||||||||| |||||||| || ||||||| ||| || ||||| Sbjct: 1714802 tactccttgatcttatcagcatgtgggtacgagtattcggtctccacagcaacagcaagc 1714861 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 1714862 acattcttgtacccattgaggaacatgtgtggtgcagcagcaatagttgggtacgagatt 1714921 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||| | |||||||||||| |||||||||||||||||||| |||||||| || ||| Sbjct: 1714922 gccagggagactgaggcaaccatagaaacaccagaagcaaacttctccatcaggtcatcc 1714981 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1714982 tcagtgaggtcaagcacctcagggctgaagactgacccactgtcatagacattggtaata 1715041 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1715042 accagcccatatgagaaggggcggataccaagcttggcaagcagagcagactcggaggag 1715101 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 |||||||||||||||||||| || |||||||| ||| || |||||||||||||||||||| Sbjct: 1715102 cccaccttgtcacccttcttaatgagctccacaggggtgataatttccacagtacccttg 1715161 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 1715162 ttaatcttggtggggatgttaagcacctg 1715190 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 1714252 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 1714297
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 ||||||||||||||||||||||| |||||||| || ||||||| ||| || ||||| Sbjct: 114302 tactccttgatcttatcagcatgtgggtacgagtattcggtctccacagcaacagcaagc 114361 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 114362 acattcttgtacccattgaggaacatgtgtggtgcagcagcaatagttgggtacgagatt 114421 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||| | |||||||||||| |||||||||||||||||||| |||||||| || ||| Sbjct: 114422 gccagggagactgaggcaaccatagaaacaccagaagcaaacttctccatcaggtcatcc 114481 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || Sbjct: 114482 tcagtgaggtcaagcacctcagggctgaagactgacccactgtcatagacattggtaata 114541 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 114542 accagcccatatgagaaggggcggataccaagcttggcaagcagagcagactcggaggag 114601 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 |||||||||||||||||||| || |||||||| ||| || |||||||||||||||||||| Sbjct: 114602 cccaccttgtcacccttcttaatgagctccacaggggtgataatttccacagtacccttg 114661 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 114662 ttaatcttggtggggatgttaagcacctg 114690 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 113752 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 113797
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 4180 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 4239 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 4240 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 4299 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 4300 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 4359 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 4360 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 4419 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4420 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 4479 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || |||||||| ||| || |||||||||| ||||||||| Sbjct: 4480 ccaaccttgtcacccttcttaatgagctccacaggggtgataatttccacggtacccttg 4539 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 4540 ttaatcttggtggggatgttaagcacctg 4568 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 179 tcctcctcgggttcttccttcttctcctcctccttgg 215 ||||||||||| |||||||||||||| |||||||||| Sbjct: 3673 tcctcctcgggctcttccttcttctcttcctccttgg 3709
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 1648466 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 1648525 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 1648526 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 1648585 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 1648586 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 1648645 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 1648646 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 1648705 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1648706 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 1648765 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || |||||||| ||| || |||||||||| ||||||||| Sbjct: 1648766 ccaaccttgtcacccttcttaatgagctccacaggggtgataatttccacggtacccttg 1648825 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 1648826 ttaatcttggtggggatgttaagcacctg 1648854 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 179 tcctcctcgggttcttccttcttctcctcctccttgg 215 ||||||||||| |||||||||||||| |||||||||| Sbjct: 1647959 tcctcctcgggctcttccttcttctcttcctccttgg 1647995 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 6304865 gcagcagcagcaggagcagca 6304885 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gtccttgaggtactccttga 299 |||||||||||||||||||| Sbjct: 26815212 gtccttgaggtactccttga 26815193
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 430 bits (217), Expect = e-117 Identities = 346/389 (88%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 ||||||||||||||||||||||| || ||||| || ||||||| ||| || ||||| Sbjct: 1646187 tactccttgatcttatcagcatgtgggtatgagtattcggtctccacagcaacagcaagc 1646246 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || |||||||| || || ||||||||||| Sbjct: 1646247 acattcttgtacccattgaggaacatgtgtggcgcagcagcaatagttgggtatgagatt 1646306 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 1646307 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 1646366 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 1646367 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 1646426 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1646427 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 1646486 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || |||||||| ||| || |||||||||| ||||||||| Sbjct: 1646487 ccaaccttgtcacccttcttaatgagctccacaggggtgataatttccacggtacccttg 1646546 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 1646547 ttaatcttggtggggatgttaagcacctg 1646575 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 179 tcctcctcgggttcttccttcttctcctcctccttgg 215 ||||||||||| |||||||||||||| |||||||||| Sbjct: 1645680 tcctcctcgggctcttccttcttctcttcctccttgg 1645716 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 6371332 gcagcagcagcaggagcagca 6371352 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gtccttgaggtactccttga 299 |||||||||||||||||||| Sbjct: 27142444 gtccttgaggtactccttga 27142425
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 1601677 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 1601736 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 1601737 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 1601796 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 1601797 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 1601856 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 1601857 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 1601916 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601917 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 1601976 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || ||||| || ||| || |||||||||||||||||||| Sbjct: 1601977 ccaaccttgtcacccttcttaatgagctctacaggggtgataatttccacagtacccttg 1602036 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 1602037 ttaatcttggtggggatgttaagcacctg 1602065 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 176 gattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 1601163 gattcttcctcgggctcttccttcttctcttcctccttgg 1601202 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaaacttgctcgggtcct 284 ||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct: 1601232 gcagcagcaacaggggcagcaacagcaaacttgctggggtcct 1601274 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 cttccttcttctcctcctcct 212 ||||||||||||||||||||| Sbjct: 27302625 cttccttcttctcctcctcct 27302645 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 26547915 gcagcagcagcaggagcagca 26547895 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctcctt 213 |||||||||||||||||||| Sbjct: 24833327 tccttcttctcctcctcctt 24833308 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacg 265 ||||||||||||| |||||||||| Sbjct: 5717542 gcagcagcagcagcagcagcaacg 5717519
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Plus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 1601677 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 1601736 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 1601737 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 1601796 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 1601797 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 1601856 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 1601857 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 1601916 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601917 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 1601976 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || ||||| || ||| || |||||||||||||||||||| Sbjct: 1601977 ccaaccttgtcacccttcttaatgagctctacaggggtgataatttccacagtacccttg 1602036 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 1602037 ttaatcttggtggggatgttaagcacctg 1602065 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 176 gattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 1601163 gattcttcctcgggctcttccttcttctcttcctccttgg 1601202 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaaacttgctcgggtcct 284 ||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct: 1601232 gcagcagcaacaggggcagcaacagcaaacttgctggggtcct 1601274 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 cttccttcttctcctcctcct 212 ||||||||||||||||||||| Sbjct: 27228225 cttccttcttctcctcctcct 27228245 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 26476084 gcagcagcagcaggagcagca 26476064 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctcctt 213 |||||||||||||||||||| Sbjct: 24761533 tccttcttctcctcctcctt 24761514 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacg 265 ||||||||||||| |||||||||| Sbjct: 5717535 gcagcagcagcagcagcagcaacg 5717512
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Minus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 91245 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 91186 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 91185 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 91126 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 91125 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 91066 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 91065 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 91006 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91005 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 90946 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || ||||| || ||| || |||||||||||||||||||| Sbjct: 90945 ccaaccttgtcacccttcttaatgagctctacaggggtgataatttccacagtacccttg 90886 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 90885 ttaatcttggtggggatgttaagcacctg 90857 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 176 gattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 91759 gattcttcctcgggctcttccttcttctcttcctccttgg 91720 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaaacttgctcgggtcct 284 ||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct: 91690 gcagcagcaacaggggcagcaacagcaaacttgctggggtcct 91648
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Minus Query: 290 tactccttgatcttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaaga 349 |||||||||||||| |||||||| || ||||| || ||||||| ||| || || || Sbjct: 24055 tactccttgatcttgtcagcatgtgggtatgagtattcggtctccacagcaacagcgagc 23996 Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| |||||||||||||||| || ||||| || || || ||||||||||| Sbjct: 23995 acattcttgtacccattgaggaacatgtgtggcgcagctgcgatagttgggtatgagatt 23936 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| || || Sbjct: 23935 gccagggacactgaggcaaccatcgaaacaccagatgcaaacttctccatcaggtcctct 23876 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatg 529 ||||||||||| || ||||| ||||||||||||||||||||||| || |||||| ||| Sbjct: 23875 tcagtgaggtcgagcacctcagggctgaagactgacccactgtcgtacacattggtgatc 23816 Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23815 accagcccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 23756 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || ||||||||||||||||| || ||||| || ||| || |||||||||||||||||||| Sbjct: 23755 ccaaccttgtcacccttcttaatgagctctacaggggtgataatttccacagtacccttg 23696 Query: 650 ttaatcttggtgggaatgttaagcacctg 678 |||||||||||||| |||||||||||||| Sbjct: 23695 ttaatcttggtggggatgttaagcacctg 23667 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 176 gattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| |||||||| |||||||||||||| |||||||||| Sbjct: 24569 gattcttcctcgggctcttccttcttctcttcctccttgg 24530 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaaacttgctcgggtcct 284 ||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct: 24500 gcagcagcaacaggggcagcaacagcaaacttgctggggtcct 24458
>emb|Y07959.1|ZMRPP0 Z.mays mRNA for acidic ribosomal protein P0 Length = 1253 Score = 222 bits (112), Expect = 1e-54 Identities = 144/155 (92%) Strand = Plus / Minus Query: 542 gagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccaccttgtca 601 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 692 gagaaggggcggatacccagcttggcgagcagggcagactcagacgagcccaccttttca 633 Query: 602 cccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatcttggtg 661 |||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||| Sbjct: 632 cccttcttgatcagctccacaggggtgataatttccacggtacccttgttaatcttggtg 573 Query: 662 ggaatgttaagcacctggaagaangacgtctggga 696 || |||||||||||||||||||| || |||||||| Sbjct: 572 gggatgttaagcacctggaagaaagaggtctggga 538 Score = 210 bits (106), Expect = 5e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 243 cagcagcagcaggagcagcaacggcaaacttgctcgggtccttgaggtactccttgatct 302 |||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 991 cagcagcaacaggagcggcaacagcaaacttgcttgggtccttgaggtactccttgatct 932 Query: 303 tatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatg 362 | |||||||| ||||||||||||||||| | ||| || ||||| ||||||||||| Sbjct: 931 tgtcagcatgtgggtacgagtagtctgtctcgacagcaacagcaagcacattcttgtacc 872 Query: 363 cattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcgccagggacagtg 422 |||||| ||||||||| || ||||||| | ||| ||||| ||||||||||| ||||| | Sbjct: 871 cattgatgaacatgtggggcacagcagcaagggtcgggtacgagatcgccagtgacaggg 812 Query: 423 aggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaa 482 ||||||||||||| ||||||| |||||||| || ||||| || ||||| | ||||||| Sbjct: 811 aggcaaccatggagacaccagtggcaaacttctcaatcaggtcctcctcggaaaggtcaa 752 Query: 483 gaacctcggggctgaagactgaccca 508 | ||||| |||||||| || |||||| Sbjct: 751 gcacctcagggctgaacacggaccca 726
>gb|BT016531.1| Zea mays clone Contig364 mRNA sequence Length = 1230 Score = 214 bits (108), Expect = 3e-52 Identities = 143/155 (92%) Strand = Plus / Minus Query: 542 gagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccaccttgtca 601 ||||||||||||||||| |||||||| |||||||||||||| || ||||||||||| ||| Sbjct: 673 gagaaggggcggatacccagcttggcgagcagggcagactcggacgagcccaccttttca 614 Query: 602 cccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatcttggtg 661 |||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||| Sbjct: 613 cccttcttgatcagctccacaggggtgataatttccacggtacccttgttaatcttggtg 554 Query: 662 ggaatgttaagcacctggaagaangacgtctggga 696 || |||||||||||||||||||| || |||||||| Sbjct: 553 gggatgttaagcacctggaagaaagaggtctggga 519 Score = 186 bits (94), Expect = 7e-44 Identities = 223/266 (83%) Strand = Plus / Minus Query: 243 cagcagcagcaggagcagcaacggcaaacttgctcgggtccttgaggtactccttgatct 302 |||||||| | || || ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 972 cagcagcaaccggggcggcaacagcaaacttgcttgggtccttgaggtactccttgatct 913 Query: 303 tatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatg 362 | |||||||| || |||||||||||||| | ||| || ||||| ||||||||||| Sbjct: 912 tgtcagcatgtgggtatgagtagtctgtctcgacagcaacagcaagcacattcttgtacc 853 Query: 363 cattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcgccagggacagtg 422 |||||| ||||||||| || ||||||| | ||| ||||| ||||||||||| ||||| | Sbjct: 852 cattgatgaacatgtggggcacagcagcaagggtcgggtacgagatcgccagtgacaggg 793 Query: 423 aggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaa 482 ||||||||||||| ||||||| |||||||| || ||||| || ||||||| ||||| | Sbjct: 792 aggcaaccatggagacaccagtggcaaacttctcaatcaggtcctcctcagaaaggtcga 733 Query: 483 gaacctcggggctgaagactgaccca 508 | ||||| |||||||| || |||||| Sbjct: 732 gcacctcagggctgaacacggaccca 707
>gb|BT018921.1| Zea mays clone Contig30.F mRNA sequence Length = 820 Score = 184 bits (93), Expect = 3e-43 Identities = 142/156 (91%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 542 gagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccaccttgtca 601 |||||||||||||| || |||||||| |||||||||||||| || ||||||||||| ||| Sbjct: 193 gagaaggggcggatgcccagcttggcgagcagggcagactcggacgagcccaccttctca 134 Query: 602 cccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatcttggtg 661 |||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 133 cccttcttgatcagctccacaggggtgataatttccacagtacccttgttaatcttggtg 74 Query: 662 ggaatgttaagcacctggaagaangacgtctgggag 697 || ||||| ||||||| |||||| || ||||||||| Sbjct: 73 gggatgtt-agcacct-gaagaaagaggtctgggag 40 Score = 141 bits (71), Expect = 4e-30 Identities = 218/267 (81%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaaacttgctcgggtccttgaggtactccttgatc 301 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 493 gcagcagctacaggagcagcaacagcaaacttgctcgggtccttgaggtactccttgatc 434 Query: 302 ttatcagcatggtcatacgagtagtctgtctccaaagcgaccgcaagaacattcttgtat 361 || || || || ||||||||||| ||||||| ||| || ||||| || |||||||| Sbjct: 433 ttgtcggcgtgtgggtacgagtagtccgtctccacagcaacagcaagcacgttcttgtac 374 Query: 362 gcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcgccagggacagt 421 |||||| |||||||| || ||||||| | ||| ||||| || | |||||||| || Sbjct: 373 ccattgataaacatgtggggcacagcagcaagggtcgggtacgataatgccagggaaaga 314 Query: 422 gaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcctcagtgaggtca 481 || || |||||||| ||||||| || ||||| || || || || ||||||| |||||| Sbjct: 313 gaagcgaccatggagacaccagtggcgaacttctcgattaggtcctcctcagaaaggtca 254 Query: 482 agaacctcggggctgaagactgaccca 508 || ||||| |||||||| || |||||| Sbjct: 253 agcacctcagggctgaacacagaccca 227
>ref|NM_111754.2| Arabidopsis thaliana structural constituent of ribosome AT3G09200 mRNA, complete cds Length = 1307 Score = 165 bits (83), Expect = 2e-37 Identities = 280/346 (80%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 818 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 759 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 758 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 699 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 698 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 639 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 638 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 579 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 578 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 519 Query: 651 taatcttggtgggaatgttaagcacctggaagaangacgtctggga 696 |||||||||| || |||||||||||||||||||| || || ||||| Sbjct: 518 taatcttggttgggatgttaagcacctggaagaaagatgtttggga 473
>gb|AY059117.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 994 Score = 165 bits (83), Expect = 2e-37 Identities = 280/346 (80%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 748 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 689 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 688 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 629 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 628 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 569 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 568 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 509 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 508 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 449 Query: 651 taatcttggtgggaatgttaagcacctggaagaangacgtctggga 696 |||||||||| || |||||||||||||||||||| || || ||||| Sbjct: 448 taatcttggttgggatgttaagcacctggaagaaagatgtttggga 403
>gb|AF370225.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 1160 Score = 165 bits (83), Expect = 2e-37 Identities = 280/346 (80%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 818 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 759 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 758 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 699 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 698 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 639 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 638 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 579 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 578 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 519 Query: 651 taatcttggtgggaatgttaagcacctggaagaangacgtctggga 696 |||||||||| || |||||||||||||||||||| || || ||||| Sbjct: 518 taatcttggttgggatgttaagcacctggaagaaagatgtttggga 473
>emb|BX823923.1|CNS0A6KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 165 bits (83), Expect = 2e-37 Identities = 280/346 (80%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 785 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 726 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 725 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 666 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 665 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 606 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 605 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 546 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 545 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 486 Query: 651 taatcttggtgggaatgttaagcacctggaagaangacgtctggga 696 |||||||||| || |||||||||||||||||||| || || ||||| Sbjct: 485 taatcttggttgggatgttaagcacctggaagaaagatgtttggga 440
>gb|AY086582.1| Arabidopsis thaliana clone 2595 mRNA, complete sequence Length = 1199 Score = 165 bits (83), Expect = 2e-37 Identities = 280/346 (80%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 816 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 757 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 756 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 697 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 696 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 637 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 636 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 577 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 576 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 517 Query: 651 taatcttggtgggaatgttaagcacctggaagaangacgtctggga 696 |||||||||| || |||||||||||||||||||| || || ||||| Sbjct: 516 taatcttggttgggatgttaagcacctggaagaaagatgtttggga 471
>dbj|AB091076.1| Zinnia elegans ZeRPP0 mRNA for putative 60S acidic ribosomal protein P0, partial cds Length = 820 Score = 159 bits (80), Expect = 1e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 575 gcagactcagaggagcccaccttgtcacccttcttgatcagctccactgggatggtaatt 634 |||| |||||| || ||||| ||||||||||||||||| |||||||||||| || ||||| Sbjct: 734 gcagcctcagatgaacccactttgtcacccttcttgataagctccactggggtgataatt 675 Query: 635 tccacagtacccttgttaatcttggtgggaatgttaagcacctggaagaangacgtctg 693 || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 674 tcaacagtacccttgttaatcttggtgggaatgttaagcacctggaagaaagaggtctg 616
>ref|XM_479932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 451 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Minus Query: 257 gcagcaacggcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtca 316 |||||||| || |||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 187 gcagcaacagcgaacttgctggggtctttcaaatactccttgatcttatcagcatgtggg 128 Query: 317 tacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatg 376 |||||||| || ||||||| ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 127 tacgagtattcggtctccacagcaacagcaagcacattcttgtacccattgaggaacatg 68 Query: 377 tgcggtgcagcagccatggtggggtatgagatcgccagggacagtgaggcaaccatggaa 436 || ||||||||||| || || ||||| ||||| |||||||| | |||||||||||| ||| Sbjct: 67 tgtggtgcagcagcaatagttgggtacgagattgccagggagactgaggcaaccatagaa 8 Query: 437 acaccag 443 ||||||| Sbjct: 7 acaccag 1 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 274 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 229
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 149 bits (75), Expect = 1e-32 Identities = 264/327 (80%) Strand = Plus / Plus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 20252 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 20311 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 20312 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 20371 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 20372 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 20431 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 20432 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 20491 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 20492 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 20551 Query: 651 taatcttggtgggaatgttaagcacct 677 |||||||||| || ||||||||||||| Sbjct: 20552 taatcttggttgggatgttaagcacct 20578
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 149 bits (75), Expect = 1e-32 Identities = 264/327 (80%) Strand = Plus / Plus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatcg 410 |||||||||| ||||||| |||||| |||||||||||||| | ||| ||||| || | | Sbjct: 84575 cattcttgtacgcattgatgaacatatgcggtgcagcagcaagggtagggtacgacacag 84634 Query: 411 ccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcct 470 | || | || || | |||||||| | ||||||||||||||| |||| || | || | Sbjct: 84635 caagagccaaggaagtgaccatggagataccagaagcaaacttctccacaagttggtctt 84694 Query: 471 cagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcagatga 530 |||| || ||||||||||| |||||||||||||| ||| ||||||||||| || | Sbjct: 84695 cagtaagatcaagaacctctgggctgaagactgagccattgtcatagacagactggacaa 84754 Query: 531 ccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagc 590 | || ||||||||||| || | ||| ||||||||||| || || |||| |||||| || | Sbjct: 84755 caagaccatatgagaacggcctgatgccaagcttggctagaagcgcagcctcagaagacc 84814 Query: 591 ccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgt 650 | ||||||||||| | |||||| ||||| |||||| || | ||||| || |||||||||| Sbjct: 84815 cgaccttgtcaccttgcttgataagctcaactggggtgatgatttcgacggtacccttgt 84874 Query: 651 taatcttggtgggaatgttaagcacct 677 |||||||||| || ||||||||||||| Sbjct: 84875 taatcttggttgggatgttaagcacct 84901
>dbj|AK062008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E02, full insert sequence Length = 451 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Minus Query: 257 gcagcaacggcaaacttgctcgggtccttgaggtactccttgatcttatcagcatggtca 316 |||||||| || |||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 187 gcagcaacagcgaacttgctggggtctttcaaatactccttgatcttatcagcatgtggg 128 Query: 317 tacgagtagtctgtctccaaagcgaccgcaagaacattcttgtatgcattgaggaacatg 376 |||||||| || ||||||| ||| || ||||| ||||||||||| |||||||||||||| Sbjct: 127 tacgagtattcggtctccacagcaacagcaagcacattcttgtacccattgaggaacatg 68 Query: 377 tgcggtgcagcagccatggtggggtatgagatcgccagggacagtgaggcaaccatggaa 436 || ||||||||||| || || ||||| ||||| |||||||| | |||||||||||| ||| Sbjct: 67 tgtggtgcagcagcaatagttgggtacgagattgccagggagactgaggcaaccatagaa 8 Query: 437 acaccag 443 ||||||| Sbjct: 7 acaccag 1 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 170 ccatctgattcctcctcgggttcttccttcttctcctcctccttgg 215 ||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 274 ccatcggactcctcctcgggctcttccttcttctcttcctccttgg 229
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 149 bits (75), Expect = 1e-32 Identities = 281/350 (80%) Strand = Plus / Minus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 ||||||||||||||||| ||||||| |||||||| ||||| ||||| | || || ||| Sbjct: 885 gcaagaacattcttgtaggcattgacaaacatgtgtggtgctgcagcaagtgttggatat 826 Query: 404 gagatcgccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcaga 463 || || |||| || ||||| | |||||| || ||||||| ||||||||| | || ||| Sbjct: 825 gaaatagccaatgaaagtgaagtaaccattgagacaccagcagcaaacttcccaatgaga 766 Query: 464 tcttcctcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattg 523 || |||||||| || ||||||||||| |||||||| ||||| ||| | ||||| || | Sbjct: 765 tcatcctcagtaagatcaagaacctcagggctgaacactgaaccattatcataaacggag 706 Query: 524 cagatgaccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactca 583 | || || |||||||||||||| | || || ||||||||||||| |||| ||| Sbjct: 705 agaaccacaagcccatatgagaagggccttatgcctagcttggcaagcaatgcagcttca 646 Query: 584 gaggagcccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagta 643 || || || |||||||| |||||| | || || ||||| || | | |||||||||||| Sbjct: 645 gaagatccaaccttgtctcccttcctaatgagttccacaggtgtaatgatttccacagta 586 Query: 644 cccttgttaatcttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 585 cccttgttaatcttggtaggaatgttaagcacctggaagaaagaggtctg 536 Score = 50.1 bits (25), Expect = 0.010 Identities = 95/118 (80%), Gaps = 9/118 (7%) Strand = Plus / Minus Query: 188 ggttcttccttcttctcctcctccttgggggcagcagcggcggcaccaccagaggcagca 247 |||||||||||||| ||||||||||| ||| ||||| || | | ||||||| |||||| Sbjct: 1044 ggttcttccttcttttcctcctcctt---ggctgcagccgctggagcaccagatgcagca 988 Query: 248 gcagcaggagca------gcaacggcaaacttgctcgggtccttgaggtactccttga 299 |||| || |||| ||||||||||| || || |||||||| || |||||||||| Sbjct: 987 gcaggagcagcaacggcggcaacggcaaatttacttgggtccttcagatactccttga 930
>emb|BX824039.1|CNS0A6RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1185 Score = 147 bits (74), Expect = 6e-32 Identities = 220/269 (81%) Strand = Plus / Minus Query: 428 accatggaaacaccagaagcaaacttgtccatcagatcttcctcagtgaggtcaagaacc 487 |||||||| | ||||||||||||||| |||| || | || ||||| || ||||||||| Sbjct: 725 accatggagataccagaagcaaacttctccacaagttggtcttcagtaagatcaagaacc 666 Query: 488 tcggggctgaagactgacccactgtcatagacattgcagatgaccagtccatatgagaag 547 || |||||||||||||| ||| | ||||||||| || || || ||||||||||| Sbjct: 665 tctgggctgaagactgagccattttcatagacagactggacaacaagaccatatgagaac 606 Query: 548 gggcggataccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttc 607 || | ||| ||||||||||| || || |||| |||||| || || ||||||||||| | | Sbjct: 605 ggcctgatgccaagcttggctagaagcgcagcctcagaagacccgaccttgtcaccttgc 546 Query: 608 ttgatcagctccactgggatggtaatttccacagtacccttgttaatcttggtgggaatg 667 ||||| ||||| |||||| || | ||||| || |||||||||||||||||||| || ||| Sbjct: 545 ttgataagctcaactggggtgatgatttcgacggtacccttgttaatcttggttgggatg 486 Query: 668 ttaagcacctggaagaangacgtctggga 696 ||||||||||||||||| || || ||||| Sbjct: 485 ttaagcacctggaagaaagatgtttggga 457 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagcagc 390 |||||||||| ||||||| |||||| |||||||||||||| Sbjct: 802 cattcttgtacgcattgatgaacatatgcggtgcagcagc 763
>emb|X93587.1|LLP0 L.luteus mRNA for P0 ribosomal protein Length = 1393 Score = 145 bits (73), Expect = 2e-31 Identities = 141/164 (85%) Strand = Plus / Minus Query: 530 accagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggag 589 ||||| ||||||||||| || | || |||||||||||||||| |||| ||||| ||| Sbjct: 728 accagaccatatgagaatggccttatgccaagcttggcaagcaatgcagcttcagaagag 669 Query: 590 cccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttg 649 || |||||||| |||||||| || |||||||| || || ||||||| |||||||||||| Sbjct: 668 ccaaccttgtctcccttcttaatgagctccacgggtgtgataatttcaacagtacccttg 609 Query: 650 ttaatcttggtgggaatgttaagcacctggaagaangacgtctg 693 |||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 608 ttaatcttggtgggaatgttgagcacctggaagaaagaggtctg 565
>gb|DQ235176.1| Solanum tuberosum clone 156H10 P0 ribosomal protein-like mRNA, complete cds Length = 1254 Score = 137 bits (69), Expect = 5e-29 Identities = 203/248 (81%) Strand = Plus / Minus Query: 446 gcaaacttgtccatcagatcttcctcagtgaggtcaagaacctcggggctgaagactgac 505 |||||||| || || ||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 819 gcaaacttctcaatgagatcatcctcagtcaggtcaagaacctcagggctgaagacggat 760 Query: 506 ccactgtcatagacattgcagatgaccagtccatatgagaaggggcggataccaagcttg 565 ||| |||| || ||| | | || || ||||||||||| || | || ||||| ||| Sbjct: 759 ccattgtcgtaaacagagacaacaacaagaccatatgagaatggcctaattccaagtttg 700 Query: 566 gcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagctccactggg 625 ||||||||||||| |||||||| || || ||||||||||||||||| || || || || Sbjct: 699 gcaagcagggcagcttcagaggaaccaactttgtcacccttcttgatgagttcaacagga 640 Query: 626 atggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacctggaagaan 685 || ||||||| |||||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 639 gtgataatttcaacagtacccttgttaatcttagttgggatgttgagcacctggaagaaa 580 Query: 686 gacgtctg 693 || ||||| Sbjct: 579 gaggtctg 572 Score = 50.1 bits (25), Expect = 0.010 Identities = 123/155 (79%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 146 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 205 ||||||| |||||| ||||| || ||||||| |||| | || ||||||||||||||| Sbjct: 1122 tcaaacaaactgaaacccatgtcatcatctgagacctcagcaggctcttccttcttctcc 1063 Query: 206 tcctccttgggggcagcagcggcggcacc---accagaggcagcagcagcaggagcagca 262 |||||||| | ||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 1062 tcctccttagcagcagcaggagcagctccagaaccagcagctgcagcaggagcagcagca 1003 Query: 263 acggcaaacttgctcgggtccttgaggtactcctt 297 || ||||||||||| || ||| |||||| ||||| Sbjct: 1002 acagcaaacttgctaggatccgcgaggtattcctt 968
>gb|DQ241840.1| Solanum tuberosum clone 181G12 P0 ribosomal protein-like mRNA, complete cds Length = 1253 Score = 137 bits (69), Expect = 5e-29 Identities = 203/248 (81%) Strand = Plus / Minus Query: 446 gcaaacttgtccatcagatcttcctcagtgaggtcaagaacctcggggctgaagactgac 505 |||||||| || || ||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 797 gcaaacttctcaatgagatcatcctcagtcaggtcaagaacctcagggctgaagacggat 738 Query: 506 ccactgtcatagacattgcagatgaccagtccatatgagaaggggcggataccaagcttg 565 ||| |||| || ||| | | || || ||||||||||| || | || ||||| ||| Sbjct: 737 ccattgtcgtaaacagagacaacaacaagaccatatgagaatggcctaattccaagtttg 678 Query: 566 gcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagctccactggg 625 ||||||||||||| |||||||| || || ||||||||||||||||| || || || || Sbjct: 677 gcaagcagggcagcttcagaggaaccaactttgtcacccttcttgatgagttcaacagga 618 Query: 626 atggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacctggaagaan 685 || ||||||| |||||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 617 gtgataatttcaacagtacccttgttaatcttagttgggatgttgagcacctggaagaaa 558 Query: 686 gacgtctg 693 || ||||| Sbjct: 557 gaggtctg 550 Score = 50.1 bits (25), Expect = 0.010 Identities = 123/155 (79%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 146 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 205 ||||||| |||||| ||||| || ||||||| |||| | || ||||||||||||||| Sbjct: 1100 tcaaacaaactgaaacccatgtcatcatctgagacctcagcaggctcttccttcttctcc 1041 Query: 206 tcctccttgggggcagcagcggcggcacc---accagaggcagcagcagcaggagcagca 262 |||||||| | ||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 1040 tcctccttagcagcagcaggagcagctccagaaccagcagctgcagcaggagcagcagca 981 Query: 263 acggcaaacttgctcgggtccttgaggtactcctt 297 || ||||||||||| || ||| |||||| ||||| Sbjct: 980 acagcaaacttgctaggatccgcgaggtattcctt 946
>ref|NM_111960.2| Arabidopsis thaliana structural constituent of ribosome AT3G11250 mRNA, complete cds Length = 1239 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||| || || ||||||| |||||| || || ||||||||||| | |||||| ||| Sbjct: 635 ccaagcttagctagaagggcagcctcagaagacccaaccttgtcaccttgcttgataagc 576 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 575 tccacaggggtgataatttcaacagtacccttgttaatcttagtgggaatgttaagcacc 516 Query: 677 tggaagaa 684 |||||||| Sbjct: 515 tggaagaa 508 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagc 387 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 841 cattcttgtaggcattgatgaacatatgcggtgcagc 805
>gb|AY091201.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1003 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||| || || ||||||| |||||| || || ||||||||||| | |||||| ||| Sbjct: 542 ccaagcttagctagaagggcagcctcagaagacccaaccttgtcaccttgcttgataagc 483 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 482 tccacaggggtgataatttcaacagtacccttgttaatcttagtgggaatgttaagcacc 423 Query: 677 tggaagaa 684 |||||||| Sbjct: 422 tggaagaa 415 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagc 387 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 748 cattcttgtaggcattgatgaacatatgcggtgcagc 712
>gb|AY056150.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1174 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||| || || ||||||| |||||| || || ||||||||||| | |||||| ||| Sbjct: 605 ccaagcttagctagaagggcagcctcagaagacccaaccttgtcaccttgcttgataagc 546 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 545 tccacaggggtgataatttcaacagtacccttgttaatcttagtgggaatgttaagcacc 486 Query: 677 tggaagaa 684 |||||||| Sbjct: 485 tggaagaa 478 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagc 387 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 811 cattcttgtaggcattgatgaacatatgcggtgcagc 775
>gb|AY087728.1| Arabidopsis thaliana clone 38036 mRNA, complete sequence Length = 1185 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||| || || ||||||| |||||| || || ||||||||||| | |||||| ||| Sbjct: 582 ccaagcttagctagaagggcagcctcagaagacccaaccttgtcaccttgcttgataagc 523 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 522 tccacaggggtgataatttcaacagtacccttgttaatcttagtgggaatgttaagcacc 463 Query: 677 tggaagaa 684 |||||||| Sbjct: 462 tggaagaa 455 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagc 387 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 788 cattcttgtaggcattgatgaacatatgcggtgcagc 752
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Minus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||| || || ||||||| |||||| || || ||||||||||| | |||||| ||| Sbjct: 59463 ccaagcttagctagaagggcagcctcagaagacccaaccttgtcaccttgcttgataagc 59404 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 ||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 59403 tccacaggggtgataatttcaacagtacccttgttaatcttagtgggaatgttaagcacc 59344 Query: 677 t 677 | Sbjct: 59343 t 59343 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 351 cattcttgtatgcattgaggaacatgtgcggtgcagc 387 |||||||||| ||||||| |||||| ||||||||||| Sbjct: 59669 cattcttgtaggcattgatgaacatatgcggtgcagc 59633
>gb|AF227622.1|AF227622 Euphorbia esula 60S acidic ribosomal protein PO mRNA, partial cds Length = 1127 Score = 121 bits (61), Expect = 3e-24 Identities = 111/128 (86%) Strand = Plus / Minus Query: 569 agcagggcagactcagaggagcccaccttgtcacccttcttgatcagctccactgggatg 628 |||| ||||| ||| ||||||||||||||||| ||||||||||| || ||||| ||| || Sbjct: 524 agcaaggcagcctcggaggagcccaccttgtctcccttcttgattagttccacaggggtg 465 Query: 629 gtaatttccacagtacccttgttaatcttggtgggaatgttaagcacctggaagaangac 688 | ||||| || || ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 464 atgatttcgactgttcccttgttaatcttggtaggaatgttaaggacctggaagaaagag 405 Query: 689 gtctggga 696 |||||||| Sbjct: 404 gtctggga 397 Score = 44.1 bits (22), Expect = 0.61 Identities = 49/58 (84%) Strand = Plus / Minus Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgaga 407 ||||||||||| ||||| | ||||||||| || |||||||| | || |||||||||| Sbjct: 743 acattcttgtaggcattaatgaacatgtggggggcagcagctagagttgggtatgaga 686
>dbj|AB236824.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C2319 Length = 1345 Score = 113 bits (57), Expect = 8e-22 Identities = 92/104 (88%) Strand = Plus / Minus Query: 593 accttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgtta 652 |||||||| ||||||||||| || || || ||| | | ||||||||||||||||||||| Sbjct: 665 accttgtctcccttcttgatgagttcaacaggggtaatgatttccacagtacccttgtta 606 Query: 653 atcttggtgggaatgttaagcacctggaagaangacgtctggga 696 ||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 605 atcttggtggggatgttaagcacctggaagaaagaggtctggga 562 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 346 aagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatga 405 ||||||||||||||| ||||||| ||||||||| |||||||| || | || ||||| || Sbjct: 912 aagaacattcttgtaggcattgacgaacatgtgaggtgcagctgcaagtgttgggtaaga 853 Query: 406 gatcgccagggacagtgaggcaaccatggaaacacca 442 ||| |||| || ||||| | |||||| ||||||||| Sbjct: 852 gatggccaacgaaagtgaagtaaccattgaaacacca 816 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 196 cttcttctcctcctccttgggggcagcagcggcggcacc 234 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 1065 cttcttctcctcctccttggctgcagcaggggcggcacc 1027
>dbj|AB236811.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C212 Length = 1326 Score = 113 bits (57), Expect = 8e-22 Identities = 92/104 (88%) Strand = Plus / Minus Query: 593 accttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgtta 652 |||||||| ||||||||||| || || || ||| | | ||||||||||||||||||||| Sbjct: 672 accttgtctcccttcttgatgagttcaacaggggtaatgatttccacagtacccttgtta 613 Query: 653 atcttggtgggaatgttaagcacctggaagaangacgtctggga 696 ||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 612 atcttggtggggatgttaagcacctggaagaaagaggtctggga 569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 346 aagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatga 405 ||||||||||||||| ||||| | ||||||||| |||||||| || | || ||||| || Sbjct: 919 aagaacattcttgtaggcattcacgaacatgtgaggtgcagctgcaagtgttgggtaaga 860 Query: 406 gatcgccagggacagtgaggcaaccatggaaacacca 442 ||| |||| || ||||| | |||||| ||||||||| Sbjct: 859 gatggccaacgaaagtgaagtaaccattgaaacacca 823 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 196 cttcttctcctcctccttgggggcagcagcggcggcacc 234 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 1072 cttcttctcctcctccttggctgcagcaggggcggcacc 1034
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence Length = 133305 Score = 109 bits (55), Expect = 1e-20 Identities = 172/211 (81%) Strand = Plus / Plus Query: 467 tcctcagtgaggtcaagaacctcggggctgaagactgacccactgtcatagacattgcag 526 ||||||||||||||||||||||| ||||| || ||||| ||| ||||||| ||| | Sbjct: 104026 tcctcagtgaggtcaagaacctcagggctaaacactgaaccattgtcataaacagaaagg 104085 Query: 527 atgaccagtccatatgagaaggggcggataccaagcttggcaagcagggcagactcagag 586 | || || |||||||| ||||| | ||||| | ||||||||||| |||| ||||| Sbjct: 104086 accacaagcccatatgaaaagggcctaatacctaacttggcaagcaatgcagcttcagaa 104145 Query: 587 gagcccaccttgtcacccttcttgatcagctccactgggatggtaatttccacagtaccc 646 || || |||||||| || ||||| ||||| ||||||||| | | ||||||||||||||| Sbjct: 104146 gatccaaccttgtctcctttcttaatcagttccactggggtaatgatttccacagtaccc 104205 Query: 647 ttgttaatcttggtgggaatgttaagcacct 677 |||||||||||||| || ||||| ||||||| Sbjct: 104206 ttgttaatcttggttgggatgttgagcacct 104236 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctccttgggggcagcagcggcggcaccaccagaggcagcagca 250 ||||||||||| |||||||||||| || ||||| | |||||||||||| ||||||||| Sbjct: 103655 tcttccttcttagcctcctccttggcagcggcagcaggggcaccaccagatgcagcagca 103714 Query: 251 gcaggagcagcaac 264 || || |||||||| Sbjct: 103715 gctggggcagcaac 103728
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 109 bits (55), Expect = 1e-20 Identities = 135/162 (83%) Strand = Plus / Minus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||||||||| || | || |||||||| ||||| || || | |||||| || |||||| Sbjct: 805 ccatatgagaaaggcctaattccaagctttgcaagtagagctgcctcagaagaacccacc 746 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 || || ||||||||||| ||||| || | || ||||||| |||||||||||||||||| Sbjct: 745 ttttcgcccttcttgatgagctctacagcagtgataatttcgacagtacccttgttaatc 686 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctgggag 697 || ||||| |||||||| ||||||||||| || ||||||||| Sbjct: 685 ttagtggggatgttaagaacctggaagaaagatgtctgggag 644 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 138 cttagtcgtcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttcct 197 |||| |||||||| |||||||| || || || |||||||||| ||||| |||||||||| Sbjct: 1206 cttaatcgtcaaagagactgaaaccgatgtcatcatctgattcttcctcaggttcttcct 1147 Query: 198 tcttctcctcc 208 |||| |||||| Sbjct: 1146 tcttttcctcc 1136
>ref|NM_129559.2| Arabidopsis thaliana structural constituent of ribosome AT2G40010 mRNA, complete cds Length = 1153 Score = 77.8 bits (39), Expect = 4e-11 Identities = 128/158 (81%) Strand = Plus / Minus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||| || ||||| | ||| |||||||||||||| || |||| ||| || || || || Sbjct: 566 ccatacgaaaagggcctgattccaagcttggcaagaagcgcagcctcggatgaaccgact 507 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 ||||| || |||||||| |||||||| ||| | | || || || ||||| ||||| || Sbjct: 506 ttgtcgcctttcttgatgagctccacaggggttatgatctcaaccgtacctttgttgatt 447 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 446 ttggttggaatgttaagcacctggaagaaggaggtctg 409 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 758 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 699 Query: 404 gagat 408 ||||| Sbjct: 698 gagat 694
>gb|AY070448.1| Arabidopsis thaliana At2g40010 mRNA sequence Length = 1373 Score = 77.8 bits (39), Expect = 4e-11 Identities = 128/158 (81%) Strand = Plus / Minus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||| || ||||| | ||| |||||||||||||| || |||| ||| || || || || Sbjct: 770 ccatacgaaaagggcctgattccaagcttggcaagaagcgcagcctcggatgaaccgact 711 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 ||||| || |||||||| |||||||| ||| | | || || || ||||| ||||| || Sbjct: 710 ttgtcgcctttcttgatgagctccacaggggttatgatctcaaccgtacctttgttgatt 651 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 650 ttggttggaatgttaagcacctggaagaaggaggtctg 613 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 962 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 903 Query: 404 gagat 408 ||||| Sbjct: 902 gagat 898
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 77.8 bits (39), Expect = 4e-11 Identities = 128/158 (81%) Strand = Plus / Plus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||| || ||||| | ||| |||||||||||||| || |||| ||| || || || || Sbjct: 77709 ccatacgaaaagggcctgattccaagcttggcaagaagcgcagcctcggatgaaccgact 77768 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 ||||| || |||||||| |||||||| ||| | | || || || ||||| ||||| || Sbjct: 77769 ttgtcgcctttcttgatgagctccacaggggttatgatctcaaccgtacctttgttgatt 77828 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 77829 ttggttggaatgttaagcacctggaagaaggaggtctg 77866 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 77517 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 77576 Query: 404 gagat 408 ||||| Sbjct: 77577 gagat 77581
>emb|BX819391.1|CNS0A9W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 77.8 bits (39), Expect = 4e-11 Identities = 128/158 (81%) Strand = Plus / Minus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||| || ||||| | ||| |||||||||||||| || |||| ||| || || || || Sbjct: 422 ccatacgaaaagggcctgattccaagcttggcaagaagcgcagcctcggatgaaccgact 363 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 ||||| || |||||||| |||||||| ||| | | || || || ||||| ||||| || Sbjct: 362 ttgtcgcctttcttgatgagctccacaggggttatgatctcaaccgtacctttgttgatt 303 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 302 ttggttggaatgttaagcacctggaagaaggaggtctg 265 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 344 gcaagaacattcttgtatgcattgaggaacatgt 377 |||||||| |||||||| |||||||||||||||| Sbjct: 614 gcaagaacgttcttgtaagcattgaggaacatgt 581
>gb|BT001919.1| Arabidopsis thaliana clone C105444 putative 60S acidic ribosomal protein P0 (At2g40010) mRNA, complete cds Length = 985 Score = 77.8 bits (39), Expect = 4e-11 Identities = 128/158 (81%) Strand = Plus / Minus Query: 536 ccatatgagaaggggcggataccaagcttggcaagcagggcagactcagaggagcccacc 595 ||||| || ||||| | ||| |||||||||||||| || |||| ||| || || || || Sbjct: 566 ccatacgaaaagggcctgattccaagcttggcaagaagcgcagcctcggatgaaccgact 507 Query: 596 ttgtcacccttcttgatcagctccactgggatggtaatttccacagtacccttgttaatc 655 ||||| || |||||||| |||||||| ||| | | || || || ||||| ||||| || Sbjct: 506 ttgtcgcctttcttgatgagctccacaggggttatgatctcaaccgtacctttgttgatt 447 Query: 656 ttggtgggaatgttaagcacctggaagaangacgtctg 693 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 446 ttggttggaatgttaagcacctggaagaaggaggtctg 409 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 758 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 699 Query: 404 gagat 408 ||||| Sbjct: 698 gagat 694
>emb|BX816288.1|CNS0AE9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 67.9 bits (34), Expect = 4e-08 Identities = 111/137 (81%) Strand = Plus / Plus Query: 557 ccaagcttggcaagcagggcagactcagaggagcccaccttgtcacccttcttgatcagc 616 |||||||||||||| || |||| ||| || || || || ||||| || |||||||| ||| Sbjct: 929 ccaagcttggcaagaagcgcagcctcggatgaaccgactttgtcgcctttcttgatgagc 988 Query: 617 tccactgggatggtaatttccacagtacccttgttaatcttggtgggaatgttaagcacc 676 || || ||| | | || || || ||||| ||||| || ||||| ||||||||||||||| Sbjct: 989 tctacaggggttatgatctcaaccgtacctttgttgattttggttggaatgttaagcacc 1048 Query: 677 tggaagaangacgtctg 693 |||||||| || ||||| Sbjct: 1049 tggaagaaggaggtctg 1065 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 344 gcaagaacattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtat 403 |||||||| |||||||| ||||||||||||||||| || ||||| || | ||| ||||| Sbjct: 716 gcaagaacgttcttgtaagcattgaggaacatgtgaggcgcagctgctacggttgggtaa 775 Query: 404 gagat 408 ||||| Sbjct: 776 gagat 780
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 146 tcaaacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcc 205 |||||||||||||||||||| ||| |||| ||| |||| ||| ||||||||||| ||| Sbjct: 393 tcaaacagactgaatcccatatcgtcatcactttcttccttgggctcttccttcttttcc 334 Query: 206 tcctccttgggggcagcagcggcggcaccaccag 239 || | ||||||||||| ||||||||||||| Sbjct: 333 tcagcagcaggggcagcagctgcggcaccaccag 300
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 231 caccaccagaggcagcagcagcaggagcagcaa 263 ||||| ||||||||||||||||||||||||||| Sbjct: 103581 caccagcagaggcagcagcagcaggagcagcaa 103549 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 ggcaccaccagaggcagcagcagcag 254 ||||||| |||||||||||||||||| Sbjct: 103867 ggcaccagcagaggcagcagcagcag 103842
>gb|AC104610.13| Drosophila melanogaster 3L BAC RP98-35J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 138534 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 106182 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 106225 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| ||||||||| |||| Sbjct: 13829 gcagcagcagcagcagcagcaactgcaa 13802
>ref|NM_078514.2| Drosophila melanogaster brinker CG9653-RA (brk), mRNA Length = 3672 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 1055 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 1098
>gb|AY052069.1| Drosophila melanogaster SD02279 full length cDNA Length = 1958 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 102 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 145
>gb|AF125986.1|AF125986 Drosophila melanogaster putative transcription factor (brinker) mRNA, complete cds Length = 3654 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 1054 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 1097
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 137569 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 137612 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| ||||||||| |||| Sbjct: 45216 gcagcagcagcagcagcagcaactgcaa 45189
>dbj|AB023583.1| Drosophila melanogaster brinker mRNA for Brk, complete cds Length = 3181 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 ||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 1055 gcagcagcggcggcagcagcagcggcagcagcagcagcagcagc 1098
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 207 ||||| ||||| ||||| ||| |||| || ||||||| ||| ||||||||||||||||| Sbjct: 414 aacaggctgaagcccatgtcgtcatcagactcctccttgggctcttccttcttctcctc 356
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 194 tccttcttctcctcctccttgggggcagcagcggcggca 232 |||||||||||||||||||||| |||| | ||||||||| Sbjct: 284 tccttcttctcctcctccttggcggcacccgcggcggca 246
>gb|DQ306774.1| Hevea brasiliensis isolate SSH45 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Minus Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| ||||| | ||||||||| |||||||| |||| || |||||||| || Sbjct: 249 acattcttgtaggcattaacgaacatgtgtggtgcagctgccagagttgggtatgatatg 190 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||| | | ||| | |||||||| ||||||| |||||||| || | ||||| || Sbjct: 189 gccaatgctaatgaagtgaccatggagacaccagttgcaaacttctcaacaagatcatct 130 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcata 516 ||||| || ||||| ||||| |||||||| || || ||| ||||||| Sbjct: 129 tcagtcagatcaagcacctctgggctgaatacagagccattgtcata 83
>gb|DQ306752.1| Hevea brasiliensis isolate SSH23 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Minus Query: 350 acattcttgtatgcattgaggaacatgtgcggtgcagcagccatggtggggtatgagatc 409 ||||||||||| ||||| | ||||||||| |||||||| |||| || |||||||| || Sbjct: 249 acattcttgtaggcattaacgaacatgtgtggtgcagctgccagagttgggtatgatatg 190 Query: 410 gccagggacagtgaggcaaccatggaaacaccagaagcaaacttgtccatcagatcttcc 469 |||| | | ||| | |||||||| ||||||| |||||||| || | ||||| || Sbjct: 189 gccaatgctaatgaagtgaccatggagacaccagttgcaaacttctcaacaagatcatct 130 Query: 470 tcagtgaggtcaagaacctcggggctgaagactgacccactgtcata 516 ||||| || ||||| ||||| |||||||| || || ||| ||||||| Sbjct: 129 tcagtcagatcaagcacctctgggctgaatacagagccattgtcata 83
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence Length = 230189 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 217 ggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||||| || |||| |||||| |||||| ||||||| Sbjct: 204770 ggcagcagcggcggcagcagcagaagcagcaacagcagcagcagca 204725
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 221 gcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| ||| || |||||||||||||||||| ||||||| Sbjct: 10810 gcagcggcagcagcagcagaggcagcagcagcagcagcagca 10851 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Plus Query: 217 ggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||||| || ||| || |||||||||||||||||| ||||||| Sbjct: 10671 ggcagcagcagcagcagcagcagaggcagcagcagcagcagcagca 10716 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| || ||| || |||||||||||||||||| ||||||| Sbjct: 10843 gcagcagcagcagcagcagcagaggcagcagcagcagcagcagca 10887 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 217 ggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||||| || ||| || ||| |||||||||||||| ||||||| Sbjct: 10866 ggcagcagcagcagcagcagcagtggcagcagcagcagcagcagca 10911 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 217 ggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||||| || ||| || ||||| |||||||||||| ||||||| Sbjct: 10695 ggcagcagcagcagcagcagcagagacagcagcagcagcagcagca 10740 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 11029 gcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 11073 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| |||||| || ||| ||||||||||||| ||||||| Sbjct: 11026 gcagcagcagcggcagcagcagcagcagcagcagcagcagcagca 11070 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| || ||| || ||| |||||||||||||| ||||||| Sbjct: 11014 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagca 11058 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcag 254 |||||||| || ||| || |||||||||||||||||| Sbjct: 10894 gcagcagcagcagcagcagcagaggcagcagcagcag 10930 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 219 cagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||| || ||| || ||| |||||||||||||| ||||||| Sbjct: 10649 cagcagcagcagcagcagcagcggcagcagcagcagcagcagca 10692
>gb|AC147782.8| Mus musculus chromosome 12, clone RP24-284A21, complete sequence Length = 155158 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 113939 cagaggcagcagcagcaggagcagc 113915
>gb|AC154527.2| Mus musculus BAC clone RP23-221K13 from chromosome 14, complete sequence Length = 215802 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 94768 cagaggcagcagcagcaggagcagc 94744
>ref|XM_364091.1| Magnaporthe grisea 70-15 hypothetical protein (MG08936.4) partial mRNA Length = 2208 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 228 cggcaccaccagaggcagcagcagcaggagcagcaac 264 |||||||||||| ||||||||||||| ||||||||| Sbjct: 1807 cggcaccaccagcagcagcagcagcagcagcagcaac 1843
>ref|XM_462591.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G25564g) partial mRNA Length = 318 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| |||||||| |||| | ||||||||||||||||||| Sbjct: 233 gcagcagctgcggcaccgccagcaggagcagcagcaggagcagca 189
>gb|BC042571.1| Homo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:21267 IMAGE:4384475), complete cds Length = 4440 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 379 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 427
>gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome 14, complete sequence Length = 215949 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 4221 cagaggcagcagcagcaggagcagc 4245
>gb|AC125308.3| Mus musculus BAC clone RP24-481N17 from chromosome 5, complete sequence Length = 128910 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 85927 cagaggcagcagcagcaggagcagc 85903 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agaggcagcagcagcaggagcagca 262 ||||||||||||||||| ||||||| Sbjct: 86033 agaggcagcagcagcagcagcagca 86009
>gb|AC124068.6| Homo sapiens chromosome 15, clone RP11-217B1, complete sequence Length = 172505 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 167222 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 167174
>ref|XM_763546.1| Giardia lamblia ATCC 50803 ribosomal phosphoprotein (GLP_108_33730_32750) partial mRNA Length = 981 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 245 gcagcagcaggagcagcaacggcaaactt 273 ||||| ||||||||||||||||||||||| Sbjct: 854 gcagccgcaggagcagcaacggcaaactt 826
>gb|BC050559.1| Homo sapiens polymerase (DNA directed), gamma, mRNA (cDNA clone MGC:57709 IMAGE:6042595), complete cds Length = 4503 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 363 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 411
>ref|NM_002693.1| Homo sapiens polymerase (DNA directed), gamma (POLG), mRNA Length = 4465 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 394 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 442
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| |||||||| |||| | ||||||||||||||||||| Sbjct: 1948077 gcagcagctgcggcaccgccagcaggagcagcagcaggagcagca 1948033
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 186062 cggcgaacttgctggggtccttgatgtactccttgat 186098 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagca 253 |||||||| || |||||||||| |||||||||||| Sbjct: 180308 gcagcagcagcagcaccaccagcagcagcagcagca 180273 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cagcagcagcaggagcagca 262 |||||||||||||||||||| Sbjct: 43145 cagcagcagcaggagcagca 43164
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 140120 cggcgaacttgctggggtccttgatgtactccttgat 140084 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagca 253 |||||||| || |||||||||| |||||||||||| Sbjct: 145874 gcagcagcagcagcaccaccagcagcagcagcagca 145909
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 964 cggcgaacttgctggggtccttgatgtactccttgat 928
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 964 cggcgaacttgctggggtccttgatgtactccttgat 928
>gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA polymerase gamma (polg) gene, complete sequence Length = 170612 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 84457 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 84409
>gb|AC148174.7| Mus musculus chromosome 19, clone RP23-300E3, complete sequence Length = 166901 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 18363 cagaggcagcagcagcaggagcagc 18387
>gb|BT021447.1| Drosophila melanogaster GH01513 full insert cDNA Length = 1674 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 1350 cggcgaacttgctggggtccttgatgtactccttgat 1314
>emb|X98093.1|MIHSDNAPL H.sapiens mRNA for DNA polymerase gamma, mitochondrial protein Length = 4465 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 394 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 442
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 202487 cggcgaacttgctggggtccttgatgtactccttgat 202451 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagca 253 |||||||| || |||||||||| |||||||||||| Sbjct: 208241 gcagcagcagcagcaccaccagcagcagcagcagca 208276
>gb|U60325.1|HSU60325 Human DNA polymerase gamma mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 4320 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 271 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 319
>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence Length = 214923 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 238 agaggcagcagcagcaggagcagca 262 ||||||||||||||||||||||||| Sbjct: 80845 agaggcagcagcagcaggagcagca 80869
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 49350 cagaggcagcagcagcaggagcagc 49374
>gb|U74651.1|HSU74651 Human DNA polymerase gamma (polg) gene, promoter region and partial cds Length = 8699 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||| ||||||||| || ||| ||||||||||||| ||||||||| Sbjct: 5419 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagcaac 5467
>gb|AC171332.1| Mus musculus BAC clone RP24-270O6 from chromosome 8, complete sequence Length = 127432 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 21858 cagaggcagcagcagcaggagcagc 21834
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagc 261 ||||||||||||||||||||||||| Sbjct: 36526 cagaggcagcagcagcaggagcagc 36502
>gb|M25772.1|DROAP3A Drosophila melanogaster DNA repair protein (AP3) mRNA, complete cds Length = 1193 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttgat 300 |||| |||||||| |||||||||| |||||||||||| Sbjct: 896 cggcgaacttgctggggtccttgatgtactccttgat 860
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 70459 gcagcagcagcagcagcagcaacggcaa 70432
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 82831 ttcttccttcttctcctcctcctt 82808
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagcaac 264 |||| ||||||||||||||||||||||| Sbjct: 82807 cagaagcagcagcagcaggagcagcaac 82780 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 108959 gcagcagcagcaggagcagca 108939
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 120186 ttcttccttcttctcctcctcctt 120163 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctcctt 213 |||||||||||||||||||| Sbjct: 119856 tccttcttctcctcctcctt 119837
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagca 262 ||||| |||||||||||||||||| ||||||| Sbjct: 97853 caccagcagaggcagcagcagcagcagcagca 97884
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 432 tggaaacaccagaagcaaacttgtccat 459 |||||||||||||||||| ||||||||| Sbjct: 95996 tggaaacaccagaagcaagcttgtccat 96023
>ref|XM_973057.1| PREDICTED: Mus musculus hypothetical protein LOC669103 (LOC669103), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 177 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 330 gcagcagcagcaggagcagca 350 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 164 ggcagcagcagcaggggcagcagcggca 191
>ref|XM_973504.1| PREDICTED: Mus musculus hypothetical protein LOC664943 (LOC664943), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 177 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 330 gcagcagcagcaggagcagca 350 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 164 ggcagcagcagcaggggcagcagcggca 191
>ref|XM_975074.1| PREDICTED: Mus musculus hypothetical protein LOC674490 (LOC674490), mRNA Length = 471 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 177 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 224 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 330 gcagcagcagcaggagcagca 350 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 164 ggcagcagcagcaggggcagcagcggca 191
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 185206 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 185159 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 185053 gcagcagcagcaggagcagca 185033 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 185219 ggcagcagcagcaggggcagcagcggca 185192
>gb|BC042186.1| Homo sapiens cDNA clone IMAGE:5393404, partial cds Length = 814 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 693 ttcttccttcttctcctcctcctt 670 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 525 ttcttccttcttctcctcctcctt 502
>emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 on chromosome 6q23 Contains part of the SGK gene for serum/glucocorticoid regulated kinase, complete sequence Length = 87013 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 10013 ttcttccttcttctcctcctcctt 9990
>ref|XM_795562.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591398 (LOC591398), mRNA Length = 2148 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 753 ttcttccttcttctcctcctcctt 730
>emb|BX071599.1|CNS09RER Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Plus Query: 264 cggcaaacttgctcgggtccttgaggtactccttga 299 |||| ||||||||||||||||||| | ||||||||| Sbjct: 96 cggcgaacttgctcgggtccttgatgaactccttga 131
>emb|BX052086.1|CNS09CCQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Plus Query: 264 cggcaaacttgctcgggtccttgaggtactccttga 299 |||| ||||||||||||||||||| | ||||||||| Sbjct: 398 cggcgaacttgctcgggtccttgatgaactccttga 433
>emb|BX052085.1|CNS09CCP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Minus Query: 264 cggcaaacttgctcgggtccttgaggtactccttga 299 |||| ||||||||||||||||||| | ||||||||| Sbjct: 906 cggcgaacttgctcgggtccttgatgaactccttga 871
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192275 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||||| |||| Sbjct: 11048 gcagcagcagcaggagcagcaacagcaa 11075 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaaact 272 ||||||| ||||||||||||||| ||||||| Sbjct: 13441 gcagcaggagcaggagcagcaacagcaaact 13471 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 agcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||| |||| Sbjct: 13509 agcagcagcaggagcagcaacagcaa 13534 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 agcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||| |||| Sbjct: 12843 agcagcagcaggagcagcaacagcaa 12868 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 19021 gcagcagcagcaggagcagca 19041 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 13816 gcagcagcagcaggagcagca 13836
>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 162402 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||||| |||| Sbjct: 102913 gcagcagcagcaggagcagcaacagcaa 102940
>tpg|BK003116.1| TPA: TPA_inf: Drosophila melanogaster HDC18498 (HDC18498) gene, partial cds Length = 1319 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 828 gcagcagcagcagcagcagcaacggcaa 801
>dbj|AK021773.1| Homo sapiens cDNA FLJ11711 fis, clone HEMBA1005152 Length = 1839 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 1292 ttcttccttcttctcctcctcctt 1269
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 15516 ttcttccttcttctcctcctcctt 15493
>ref|NM_169816.1| Drosophila melanogaster fruitless CG14307-RB, transcript variant B (fru), mRNA Length = 2975 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagcaac 264 |||| ||||||||||||||||||||||| Sbjct: 2870 cagaagcagcagcagcaggagcagcaac 2897
>ref|NM_168629.2| Drosophila melanogaster RhoGAP71E CG32149-RC, transcript variant C (RhoGAP71E), mRNA Length = 3359 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||||| |||| Sbjct: 2768 gcagcagcagcaggagcagcaacagcaa 2795
>ref|NM_079673.2| Drosophila melanogaster fruitless CG14307-RF, transcript variant F (fru), mRNA Length = 4576 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagcaac 264 |||| ||||||||||||||||||||||| Sbjct: 4471 cagaagcagcagcagcaggagcagcaac 4498
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 84922 ttcttccttcttctcctcctcctt 84945 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 85172 ttcttccttcttctcctcctcct 85194 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 84770 ttcttccttcttctcctcctcct 84792 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctc 210 ||||||||||||||||||||| Sbjct: 85098 ttcttccttcttctcctcctc 85118 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctc 210 ||||||||||||||||||||| Sbjct: 85061 ttcttccttcttctcctcctc 85081 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctc 210 ||||||||||||||||||||| Sbjct: 84637 ttcttccttcttctcctcctc 84657 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcctt 213 ||||||||||| |||||||||||| Sbjct: 85150 ttcttccttctcctcctcctcctt 85173 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcctt 213 ||||||||||| |||||||||||| Sbjct: 84689 ttcttccttctcctcctcctcctt 84712 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttccttcttctcctcctcct 212 |||||||||||||||||||| Sbjct: 84609 ttccttcttctcctcctcct 84628
>dbj|AK157674.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830302H20 product:unclassifiable, full insert sequence Length = 1311 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 342 gcagcagcagcagcagcagcaacggcaa 315
>dbj|AK013560.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019J01 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 987 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 366 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 413 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 353 ggcagcagcagcaggggcagcagcggca 380
>gb|AC092231.1|AC092231 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR28B08, complete sequence Length = 155566 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 32406 gcagcagcagcagcagcagcaacggcaa 32379
>gb|AC153881.4| Mus musculus 10 BAC RP23-257B9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208992 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 90371 ttcttccttcttctcctcctcctt 90348 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 91168 tcttccttcttctcctcctcctt 91146 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 91119 tcttccttcttctcctcctcctt 91097
>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR03G07, complete sequence Length = 170064 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 152412 gcagcagcagcagcagcagcaacggcaa 152385
>gb|AC122744.16| Mus musculus chromosome 5, clone RP23-37I24, complete sequence Length = 175214 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 109774 gcagcagcagcagcagcagcaacggcaa 109801 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| ||||||||| |||| Sbjct: 109852 gcagcagcagcagcagcagcaacagcaa 109879
>dbj|AB178287.1| Neospora caninum NcRP1 mRNA for ribosomal protein P1, complete cds Length = 555 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 178 ttcctcctcgggttcttccttcttctcctcct 209 ||||||||| || ||||||||||||||||||| Sbjct: 344 ttcctcctcaggctcttccttcttctcctcct 313
>gb|AC127223.5| Mus musculus BAC clone RP24-484M18 from chromosome 7, complete sequence Length = 168323 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||||||||| ||| || ||| ||||||||||||| ||||||| Sbjct: 34592 ggggcagcagcggcagcagcagcagcagcagcagcagcagcagcagca 34545 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 34439 gcagcagcagcaggagcagca 34419 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggca 268 ||||||||||||||| |||||| ||||| Sbjct: 34605 ggcagcagcagcaggggcagcagcggca 34578
>dbj|AB121072.1| Athalia rosae dpp mRNA for decapentaplegic protein, complete cds Length = 2566 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 2318 gcagcagcagcagcagcagcaacggcaa 2291
>ref|XM_563526.1| Anopheles gambiae str. PEST ENSANGP00000029439 (ENSANGG00000023377), partial mRNA Length = 1665 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 942 gcagcagcagcagcagcagcaacggcaa 969
>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the complete sequence Length = 221164 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagcaac 264 |||| ||||||||||||||||||||||| Sbjct: 31305 cagaagcagcagcagcaggagcagcaac 31278 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 230 gcaccaccagaggcagcagcagcaggagcagca 262 |||||||||| ||||||||||||| ||||||| Sbjct: 212195 gcaccaccagcagcagcagcagcagcagcagca 212163 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 gcagcagcaggagcagcaacggcaa 269 |||||||||||||||||||| |||| Sbjct: 210132 gcagcagcaggagcagcaacagcaa 210108 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 57457 gcagcagcagcaggagcagca 57437
>gb|AE003579.3| Drosophila melanogaster chromosome 2L, section 12 of 83 of the complete sequence Length = 304674 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 175629 gcagcagcagcagcagcagcaacggcaa 175602
>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete sequence Length = 279152 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||||| |||| Sbjct: 115945 gcagcagcagcaggagcagcaacagcaa 115972
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 70162 gcagcagcagcagcagcagcaacggcaa 70135
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcctt 213 |||||||||||||||||||||||| Sbjct: 181544 ttcttccttcttctcctcctcctt 181521
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 432 tggaaacaccagaagcaaacttgtccat 459 |||||||||||||||||| ||||||||| Sbjct: 142546 tggaaacaccagaagcaagcttgtccat 142519
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||||| |||| Sbjct: 88137 gcagcagcagcaggagcagcaacagcaa 88110 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaaact 272 ||||||| ||||||||||||||| ||||||| Sbjct: 85744 gcagcaggagcaggagcagcaacagcaaact 85714 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 244 agcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||| |||| Sbjct: 86342 agcagcagcaggagcagcaacagcaa 86317 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 244 agcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||| |||| Sbjct: 85676 agcagcagcaggagcagcaacagcaa 85651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 85369 gcagcagcagcaggagcagca 85349 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 80164 gcagcagcagcaggagcagca 80144 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 |||||||||| |||||||||||| |||| Sbjct: 139167 gcagcagcagaaggagcagcaacagcaa 139194
>dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete sequence Length = 139072 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 8637 gcagcagcagcagcagcagcaacggcaa 8664
>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete sequence Length = 200458 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| |||||||||||||| Sbjct: 154010 gcagcagcagcagcagcagcaacggcaa 154037
>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence Length = 137391 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 11064 tcttccttcttctcctcctcctt 11086
>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence Length = 152183 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 57446 ttcttccttcttctcctcctcct 57424
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 172961 ttcttccttcttctcctcctcct 172939
>ref|NM_187845.1| Oryza sativa (japonica cultivar-group), Ozsa8289 predicted mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctccttggg 216 ||||||||||||||||||||||| Sbjct: 242 tccttcttctcctcctccttggg 220
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 1150 tcgggtccttgaggtactccttg 1128
>ref|XM_464973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 181 ctcctcgggttcttccttcttctcctc 207 |||||||| |||||||||||||||||| Sbjct: 643 ctcctcggcttcttccttcttctcctc 617
>ref|NM_001001883.1| Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 1, mRNA Length = 4737 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggc 267 |||||||||||||||||||||| |||| Sbjct: 2265 ggcagcagcagcaggagcagcagcggc 2239
>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence Length = 170731 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 142719 tcttccttcttctcctcctcctt 142741
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 207 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 383 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 325
>gb|AY330133.1| Pinus contorta clone PCL2146 microsatellite sequence Length = 179 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 |||||||| || ||| || ||| |||||||||||||| ||||||| ||||| Sbjct: 85 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagcagcggca 35
>gb|AY023127.1| Oryza sativa microsatellite MRG5452 containing (GCA)X9, closest to marker C402, genomic sequence Length = 227 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 237 cagaggcagcagcagcaggagcagcaacggcaaac 271 |||||||||||||||||| ||||||| | |||||| Sbjct: 96 cagaggcagcagcagcagcagcagcagcagcaaac 130
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagc 261 |||| |||||||||||||||| ||||||||| Sbjct: 72673 caccgccagaggcagcagcaggaggagcagc 72703 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacg 265 ||||||||||||| |||||||||| Sbjct: 135655 gcagcagcagcagcagcagcaacg 135678
>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence Length = 191907 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 240 aggcagcagcagcaggagcagca 262 ||||||||||||||||||||||| Sbjct: 168834 aggcagcagcagcaggagcagca 168812
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 169350 ttcttccttcttctcctcctcct 169328
>gb|AY674236.1| Ixodes pacificus clone IP_7_60_92_569_CLU ribosomal protein, large P2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 181 ctcctcgggttcttccttcttctcctcctccttgg 215 |||||||| ||||||||||||||||||| ||||| Sbjct: 309 ctcctcggactcttccttcttctcctccttcttgg 275
>ref|XM_359730.1| Magnaporthe grisea 70-15 hypothetical protein (MG05047.4) partial mRNA Length = 2649 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggca 268 ||||||||||||| ||||||||||||| Sbjct: 1551 gcagcagcagcagcagcagcaacggca 1577
>ref|XM_423724.1| PREDICTED: Gallus gallus similar to transducin (beta)-like 1 X-linked; transducin (beta)-like 1 (LOC426045), partial mRNA Length = 1307 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggca 268 ||||||||||||| ||||||||||||| Sbjct: 486 gcagcagcagcagcagcagcaacggca 512
>gb|BC026554.1| Mus musculus chromogranin A, mRNA (cDNA clone MGC:36117 IMAGE:4990941), complete cds Length = 1892 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 467 gcagcagcagcaggagcagcaac 489
>gb|BC015806.1| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone MGC:9446 IMAGE:3906722), complete cds Length = 2943 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagc 249 |||||||||||||| ||| || ||||||||||||| Sbjct: 14 ggggcagcagcggcagcagcagcagaggcagcagc 48
>ref|XM_957237.1| Neurospora crassa OR74A hypothetical protein (NCU07688.1) partial mRNA Length = 3447 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 236 ccagaggcagcagcagcaggagcagca 262 ||||||||||||||||||| ||||||| Sbjct: 2577 ccagaggcagcagcagcagcagcagca 2603
>ref|XM_328393.1| Neurospora crassa OR74A hypothetical protein (NCU07688.1) partial mRNA Length = 3447 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 236 ccagaggcagcagcagcaggagcagca 262 ||||||||||||||||||| ||||||| Sbjct: 2577 ccagaggcagcagcagcagcagcagca 2603
>gb|DQ440195.1| Aedes aegypti clone AET-173 ribosomal protein P0 mRNA, complete cds Length = 948 Score = 46.1 bits (23), Expect = 0.15 Identities = 52/61 (85%), Gaps = 3/61 (4%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggca---aacttgctcgggtccttgaggtactccttg 298 |||| |||||| || |||||||||||| |||||||| |||||||||| | |||||||| Sbjct: 854 gcagaagcagccggggcagcaacggcagcgaacttgcttgggtccttgatgaactccttg 795 Query: 299 a 299 | Sbjct: 794 a 794
>gb|DQ440047.1| Aedes aegypti clone AE-294 60S acidic ribosomal protein P1 mRNA, complete cds Length = 339 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 208 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 332 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 276 Query: 209 tcctt 213 ||||| Sbjct: 275 tcctt 271
>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence Length = 193047 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 244 agcagcagcaggagcagcaacggcaaa 270 ||||||||||||||||||||| ||||| Sbjct: 6927 agcagcagcaggagcagcaacagcaaa 6901
>ref|XM_656186.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3674.2), mRNA Length = 1671 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 1067 tcttccttcttctcctcctcctt 1045
>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence Length = 207503 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggc 267 |||||||||||||||||||||| |||| Sbjct: 46124 ggcagcagcagcaggagcagcagcggc 46098
>gb|AY190952.1| Drosophila virilis clone DVIF01_45_G15 (D1418) genomic sequence Length = 39016 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggca 268 ||||||||||||| ||||||||||||| Sbjct: 25838 gcagcagcagcagcagcagcaacggca 25864
>gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete sequence Length = 35564 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 10364 ttcttccttcttctcctcctcct 10342
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 28541 tcttccttcttctcctcctcctt 28563 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 28433 tcttccttcttctcctcctcctt 28455 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 28013 tcttccttcttctcctcctcctt 28035 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 27911 tcttccttcttctcctcctcctt 27933
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 25238 ttcttccttcttctcctcctcct 25260
>ref|XR_002749.1| PREDICTED: Mus musculus similar to THO complex subunit 4 (Tho4) (RNA and export factor binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) (LOC670007), mRNA Length = 2938 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaaact 272 ||||||| ||||||||||||||| ||||||| Sbjct: 2233 gcagcaggagcaggagcagcaacagcaaact 2263 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 244 agcagcagcaggagcagcaacggcaa 269 ||||||||||||||||||||| |||| Sbjct: 2301 agcagcagcaggagcagcaacagcaa 2326 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 2608 gcagcagcagcaggagcagca 2628
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 86312 ttcttccttcttctcctcctcct 86334
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 150252 ttcttccttcttctcctcctcct 150230
>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence Length = 180143 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 138076 tcttccttcttctcctcctcctt 138054
>gb|AC123558.5| Mus musculus BAC clone RP23-336N16 from chromosome 5, complete sequence Length = 211763 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 167146 ttcttccttcttctcctcctcct 167168
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 16331 tcttccttcttctcctcctcctt 16309 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 16229 tcttccttcttctcctcctcctt 16207 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 16106 tcttccttcttctcctcctcctt 16084 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 15686 tcttccttcttctcctcctcctt 15664 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 15578 tcttccttcttctcctcctcctt 15556
>ref|XM_815870.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508175.20) partial mRNA Length = 6117 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 232 accaccagaggcagcagcagcaggagcagca 262 ||||| ||||||||||||||||| ||||||| Sbjct: 6032 accacgagaggcagcagcagcagcagcagca 6062
>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence Length = 203739 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 16622 ttcttccttcttctcctcctcct 16600
>gb|AC125344.2| Mus musculus BAC clone RP24-332H21 from 12, complete sequence Length = 179908 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 166658 ttcttccttcttctcctcctcct 166636
>gb|BC050663.2| Homo sapiens SH3-domain kinase binding protein 1, mRNA (cDNA clone IMAGE:4421051), partial cds Length = 1370 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagc 249 |||||||||||||| ||| || ||||||||||||| Sbjct: 22 ggggcagcagcggcagcagcagcagaggcagcagc 56
>emb|CR637846.2|CNS0ER4S Tetraodon nigroviridis full-length cDNA Length = 516 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 428 tcttccttcttctcctcctcctt 406
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagc 249 |||||||||||||| ||| || ||||||||||||| Sbjct: 18149 ggggcagcagcggcagcagcagcagaggcagcagc 18115
>emb|AL596188.6| Human DNA sequence from clone CTA-31J9 on chromosome 6 Contains the 5' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 69676 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 16837 tcttccttcttctcctcctcctt 16815
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 173628 ttcttccttcttctcctcctcct 173606
>gb|AY239227.1| Eimeria maxima TFP250 mRNA, complete cds Length = 7990 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 7067 ttcttccttcttctcctcctcct 7045
>emb|X83546.1|RNLAR2 R.norvegicus mRNA for leucocyte common antigen-related protein (3941 bp) Length = 3941 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagc 252 ||||||||||||||| || ||| |||||||||||| Sbjct: 2349 gcagcagcggcggcagcagcagcggcagcagcagc 2383
>emb|CR938347.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YC06AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 631 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 208 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 425 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 369 Query: 209 tcctt 213 ||||| Sbjct: 368 tcctt 364
>emb|CR937955.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YP05BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 778 Score = 46.1 bits (23), Expect = 0.15 Identities = 52/61 (85%), Gaps = 3/61 (4%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggca---aacttgctcgggtccttgaggtactccttg 298 |||| |||||| || |||||||||||| |||||||| |||||||||| | |||||||| Sbjct: 351 gcagaagcagccggggcagcaacggcagcgaacttgcttgggtccttgatgaactccttg 410 Query: 299 a 299 | Sbjct: 411 a 411
>emb|CR937313.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YG10AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 583 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 208 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 424 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 368 Query: 209 tcctt 213 ||||| Sbjct: 367 tcctt 363
>emb|CR937312.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YG10BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 566 Score = 46.1 bits (23), Expect = 0.15 Identities = 55/65 (84%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctcc 208 ||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||| ||| Sbjct: 142 aacagaccgaatcccatatcgtcatcgga---ctcctcgggttcttcctccttcttctct 198 Query: 209 tcctt 213 ||||| Sbjct: 199 tcctt 203
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 ||||||||||| ||| || ||| ||||||| |||||| ||||||||| Sbjct: 96064 gcagcagcggcagcagcagcagcggcagcaacagcagcagcagcaac 96110
>gb|AF533773.1| Drosophila melanogaster Wnt4 protein mRNA, complete cds Length = 3202 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 310 gcagcagcagcaggagcagcaac 332
>emb|AL589766.17| Mouse DNA sequence from clone RP23-19G4 on chromosome 13 contains the Vmp gene for vesicular membrane protein P24, complete sequence Length = 176183 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 ||||||||||| ||| || ||| ||||||||||||| ||||||| ||||| Sbjct: 19178 gcagcagcggcagcagcagcagcagcagcagcagcagcagcagcagcggca 19228 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 |||||||| |||||| || ||| ||||||||||||| ||||||| Sbjct: 19175 gcagcagcagcggcagcagcagcagcagcagcagcagcagcagca 19219
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 50581 ttcttccttcttctcctcctcct 50603
>gb|AF497906.1| Homo sapiens polymerase (DNA directed), gamma (POLG) gene, complete cds Length = 21304 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||| ||||||||| || ||| ||||||||||||| ||||||| Sbjct: 2523 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagca 2569
>gb|AY118546.1| Drosophila melanogaster LD29902 full insert cDNA Length = 3289 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagc 261 |||| |||||||||||||||| ||||||||| Sbjct: 642 caccgccagaggcagcagcaggaggagcagc 672
>tpg|BK003806.1| TPA: TPA_inf: Drosophila melanogaster HDC06391 (HDC06391) gene, complete cds Length = 210 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 78 gcagcagcagcaggagcagcaac 100
>gb|AF461331.1| Drosophila bicornuta hunchback (hb) gene, partial cds Length = 501 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 230 gcaccaccagaggcagcagcagcaggagcagcaac 264 |||||||||| ||||||||||||| ||||||||| Sbjct: 84 gcaccaccagcagcagcagcagcagcagcagcaac 118
>ref|NM_169790.1| Drosophila melanogaster PP2A-B' CG7913-RA, transcript variant A (PP2A-B'), mRNA Length = 3269 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagc 261 |||| |||||||||||||||| ||||||||| Sbjct: 642 caccgccagaggcagcagcaggaggagcagc 672
>ref|NM_169789.1| Drosophila melanogaster PP2A-B' CG7913-RB, transcript variant B (PP2A-B'), mRNA Length = 3220 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagc 261 |||| |||||||||||||||| ||||||||| Sbjct: 642 caccgccagaggcagcagcaggaggagcagc 672
>gb|AY095078.1| Drosophila melanogaster RE26454 full insert cDNA Length = 2950 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 427 gcagcagcagcaggagcagcaac 449
>gb|AF367094.1| Pinus taeda microsatellite RPTest9 sequence, allele 5 Length = 249 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 |||||||| || ||| || ||| |||||||||||||| ||||||| ||||| Sbjct: 67 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagcagcggca 117
>gb|AF367093.1| Pinus taeda microsatellite RPTest9 sequence, allele 4 Length = 240 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 |||||||| || ||| || ||| |||||||||||||| ||||||| ||||| Sbjct: 58 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagcagcggca 108
>ref|NM_057624.2| Drosophila melanogaster Wnt oncogene analog 4 CG4698-RA (Wnt4), mRNA Length = 3323 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 428 gcagcagcagcaggagcagcaac 450
>dbj|AK144504.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630083O06 product:chromogranin A, full insert sequence Length = 1877 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 477 gcagcagcagcaggagcagcaac 499
>ref|NM_007693.1| Mus musculus chromogranin A (Chga), mRNA Length = 1892 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 483 gcagcagcagcaggagcagcaac 505
>gb|AF143963.1|AF143963 Pinus taeda microsatellite PtTX2146 sequence Length = 446 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 |||||||| || ||| || ||| |||||||||||||| ||||||| ||||| Sbjct: 349 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagcagcggca 299
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 134116 gcagcagcagcaggagcagcaac 134094
>gb|DQ168588.1| Macaranga indistincta clone Macin8h microsatellite sequence Length = 783 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaac 264 |||||||| |||||| || ||| ||||||||||||| ||||||||| Sbjct: 312 gcagcagcagcggcagcaacagcagcagcagcagcagcagcagcaac 358
>ref|NM_031892.1| Homo sapiens SH3-domain kinase binding protein 1 (SH3KBP1), transcript variant 1, mRNA Length = 3348 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagc 249 |||||||||||||| ||| || ||||||||||||| Sbjct: 87 ggggcagcagcggcagcagcagcagaggcagcagc 121
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 146087 ttcttccttcttctcctcctcct 146109
>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence Length = 216718 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 121148 gcagcagcagcaggagcagcaac 121126
>gb|DQ066207.1| Ixodes scapularis isolate ISUFL46 ribosomal protein LP2 mRNA, complete cds Length = 345 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 181 ctcctcgggttcttccttcttctcctcctccttgg 215 |||||||| |||||| ||||||||||||| ||||| Sbjct: 309 ctcctcggattcttctttcttctcctccttcttgg 275
>ref|NM_001028223.2| Caenorhabditis elegans T22B11.4b (T22B11.4) mRNA, complete cds Length = 1935 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 1057 ttcttccttcttctcctcctcct 1035
>ref|NM_001028222.2| Caenorhabditis elegans T22B11.4a (T22B11.4) mRNA, complete cds Length = 1958 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 1057 ttcttccttcttctcctcctcct 1035
>emb|BX935206.2| Gallus gallus finished cDNA, clone ChEST866e14 Length = 1013 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggca 268 ||||||||||||| ||||||||||||| Sbjct: 521 gcagcagcagcagcagcagcaacggca 547
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 485 gcagcagcagcaggagcagcaac 463
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagcaacggcaaac 271 |||||||||||||||||| ||||||| | |||||| Sbjct: 1611473 cagaggcagcagcagcagcagcagcagcagcaaac 1611439 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctccttgggggc 219 |||||||||||||||||| |||||||||| Sbjct: 29011758 ttcttccttcttctcctcggccttgggggc 29011787 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ggcagcagcagcaggagcagcaac 264 |||||||||||||| ||||||||| Sbjct: 3320736 ggcagcagcagcagcagcagcaac 3320759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 31019551 tcgggtccttgaggtactccttg 31019529 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 181 ctcctcgggttcttccttcttctcctc 207 |||||||| |||||||||||||||||| Sbjct: 10714608 ctcctcggcttcttccttcttctcctc 10714634 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctccttgg 215 ||||||||||||||||||| ||||| Sbjct: 22578567 tcttccttcttctcctccttcttgg 22578591 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 cttccttcttctcctcctcct 212 ||||||||||||||||||||| Sbjct: 4617572 cttccttcttctcctcctcct 4617592 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 accagaggcagcagcagcag 254 |||||||||||||||||||| Sbjct: 4482372 accagaggcagcagcagcag 4482391
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctccttggg 216 ||||||||||||||||||||||| Sbjct: 8232579 tccttcttctcctcctccttggg 8232557 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 cagtgaggcaaccatggaaac 438 ||||||||||||||||||||| Sbjct: 42649604 cagtgaggcaaccatggaaac 42649624 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagca 262 ||||||||||||||||||||| Sbjct: 8067842 gcagcagcagcaggagcagca 8067822
>gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, region 27F-27F, BAC clone BACR01E19, complete sequence Length = 161009 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 25107 gcagcagcagcaggagcagcaac 25085
>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR06D02, complete sequence Length = 172791 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 26144 gcagcagcagcaggagcagcaac 26166 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 |||||||||||||| || ||| ||| |||||||||| |||||| Sbjct: 93175 gcagcagcggcggcggcagcagcggcggcagcagcagcagcagc 93218
>gb|AY826878.1| Heterocapsa triquetra clone HTEFTS1 chloroplast translation factor Ts mRNA, partial cds; nuclear gene for chloroplast product Length = 1657 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctccttggg 216 ||||||||||||||||||||||| Sbjct: 982 tccttcttctcctcctccttggg 960
>gb|AF286612.1|AF286612 Pinus taeda clone PtTX2025 microsatellite sequence Length = 446 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagcaacggca 268 |||||||| || ||| || ||| |||||||||||||| ||||||| ||||| Sbjct: 349 gcagcagcagcagcagcagcagcggcagcagcagcagcagcagcagcggca 299
>gb|AC087564.6| Homo sapiens chromosome 16 clone RP11-437L7, complete sequence Length = 157233 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 236 ccagaggcagcagcagcaggagcagca 262 ||||||||||||||||||| ||||||| Sbjct: 98314 ccagaggcagcagcagcagcagcagca 98340
>ref|XM_576589.1| PREDICTED: Rattus norvegicus Indian hedgehog homolog, (Drosophila) (Ihh), mRNA Length = 1368 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 234 caccagaggcagcagcagcaggagcag 260 ||||||| ||||||||||||||||||| Sbjct: 296 caccagaagcagcagcagcaggagcag 270
>gb|AC104512.11| Drosophila melanogaster BAC RP98-39C15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172654 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 90874 gcagcagcagcaggagcagcaac 90852
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 tccttcttctcctcctccttggg 216 ||||||||||||||||||||||| Sbjct: 26510 tccttcttctcctcctccttggg 26488
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagca 259 ||||||||||||||||||||||| Sbjct: 265702 cagaggcagcagcagcaggagca 265680
>gb|AC005703.2|AC005703 Homo sapiens chromosome 17, clone hRPK.849_N_15, complete sequence Length = 233454 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacggcaaact 272 ||||||||||||| ||||||||| ||||||| Sbjct: 174096 gcagcagcagcagcagcagcaacagcaaact 174126
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagcaacggcaaac 271 |||||||||||||||||| ||||||| | |||||| Sbjct: 14635 cagaggcagcagcagcagcagcagcagcagcaaac 14601
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 74507 tcgggtccttgaggtactccttg 74485
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 8775 tcgggtccttgaggtactccttg 8753
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 237 cagaggcagcagcagcaggagcagcaacggcaaac 271 |||||||||||||||||| ||||||| | |||||| Sbjct: 140197 cagaggcagcagcagcagcagcagcagcagcaaac 140163
>dbj|AB182244.1| Mus musculus Nedl2 mRNA for ubiquitin-protein ligase NEDL2, complete cds Length = 4737 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggc 267 |||||||||||||||||||||| |||| Sbjct: 2265 ggcagcagcagcaggagcagcagcggc 2239
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 181 ctcctcgggttcttccttcttctcctc 207 |||||||| |||||||||||||||||| Sbjct: 132298 ctcctcggcttcttccttcttctcctc 132324
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 181 ctcctcgggttcttccttcttctcctc 207 |||||||| |||||||||||||||||| Sbjct: 54089 ctcctcggcttcttccttcttctcctc 54115
>dbj|AK129325.1| Mus musculus mRNA for mKIAA1301 protein Length = 6415 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 241 ggcagcagcagcaggagcagcaacggc 267 |||||||||||||||||||||| |||| Sbjct: 1896 ggcagcagcagcaggagcagcagcggc 1870
>gb|AF230904.1|AF230904 Homo sapiens c-Cbl-interacting protein (CIN85) mRNA, complete cds Length = 3348 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 215 ggggcagcagcggcggcaccaccagaggcagcagc 249 |||||||||||||| ||| || ||||||||||||| Sbjct: 87 ggggcagcagcggcagcagcagcagaggcagcagc 121
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 1149 tcgggtccttgaggtactccttg 1127
>dbj|AK058613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A12, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 181 ctcctcgggttcttccttcttctcctc 207 |||||||| |||||||||||||||||| Sbjct: 643 ctcctcggcttcttccttcttctcctc 617
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcgggtccttgaggtactccttg 298 ||||||||||||||||||||||| Sbjct: 1072 tcgggtccttgaggtactccttg 1050
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 caccaccagaggcagcagcagcaggagcagc 261 |||| |||||||||||||||| ||||||||| Sbjct: 13097 caccgccagaggcagcagcaggaggagcagc 13127 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaacg 265 ||||||||||||| |||||||||| Sbjct: 76079 gcagcagcagcagcagcagcaacg 76102
>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete sequence Length = 157875 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 aggcagcagcagcaggagcagca 262 ||||||||||||||||||||||| Sbjct: 147671 aggcagcagcagcaggagcagca 147693
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 249406 gcagcagcagcaggagcagcaac 249384
>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete sequence Length = 254438 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 62000 gcagcagcagcaggagcagcaac 62022 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 218 gcagcagcggcggcaccaccagaggcagcagcagcaggagcagc 261 |||||||||||||| || ||| ||| |||||||||| |||||| Sbjct: 129031 gcagcagcggcggcggcagcagcggcggcagcagcagcagcagc 129074
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 32775 gcagcagcagcaggagcagcaac 32753
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete sequence Length = 316794 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 52798 gcagcagcagcaggagcagcaac 52820 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaacggcaa 269 ||||||||||||| ||||||||| |||| Sbjct: 243616 gcagcagcagcagcagcagcaacagcaa 243589
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 125950 ttcttccttcttctcctcctcct 125928
>gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, region 38C1-38C2, P1 clones DS01096 and DS00956, complete sequence Length = 106735 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 240 aggcagcagcagcaggagcagca 262 ||||||||||||||||||||||| Sbjct: 81977 aggcagcagcagcaggagcagca 81955
>gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA polymerase gamma (polg) gene, complete sequence Length = 117270 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 216 gggcagcagcggcggcaccaccagaggcagcagcagcaggagcagca 262 ||||||| ||||||||| || ||| ||||||||||||| ||||||| Sbjct: 27690 gggcagcggcggcggcagcagcagcagcagcagcagcagcagcagca 27644
>gb|AC004322.1|AC004322 Drosophila melanogaster DNA sequence (P1 DS01962 (D216)), complete sequence Length = 32480 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gcagcagcagcaggagcagcaac 264 ||||||||||||||||||||||| Sbjct: 5714 gcagcagcagcaggagcagcaac 5692
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 152914 ttcttccttcttctcctcctcct 152892
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 537 ttcttccttcttctcctcctcct 515
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 190 ttcttccttcttctcctcctcct 212 ||||||||||||||||||||||| Sbjct: 160984 ttcttccttcttctcctcctcct 161006
>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence Length = 205357 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 tcttccttcttctcctcctcctt 213 ||||||||||||||||||||||| Sbjct: 186871 tcttccttcttctcctcctcctt 186893
>gb|U62752.1|ZMU62752 Zea mays acidic ribosomal protein P1a (rpp1a) mRNA, complete cds Length = 573 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 207 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 354 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 296
>gb|U40147.1|ZMU40147 Zea mays ribosomal protein L12 mRNA, complete cds Length = 530 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 149 aacagactgaatcccatctcgccatctgattcctcctcgggttcttccttcttctcctc 207 ||||| ||||| ||||| ||| |||| || ||||||| || ||||||||||||||||| Sbjct: 389 aacaggctgaagcccatgtcgtcatcagactcctccttggcctcttccttcttctcctc 331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,683,803 Number of Sequences: 3902068 Number of extensions: 7683803 Number of successful extensions: 368519 Number of sequences better than 10.0: 3897 Number of HSP's better than 10.0 without gapping: 3914 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 337288 Number of HSP's gapped (non-prelim): 28309 length of query: 697 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 674 effective length of database: 17,143,297,704 effective search space: 11554582652496 effective search space used: 11554582652496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
