ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23j22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009619.1| Triticum aestivum clone wre1n.pk0123.c3:fis, full insert mRNA sequence Length = 1508 Score = 771 bits (389), Expect = 0.0 Identities = 577/631 (91%), Gaps = 14/631 (2%) Strand = Plus / Minus Query: 30 atatgatacaggtgatatcaactaggaaaagaaagaattggacgacaagaattcaacaag 89 |||||||||| ||||||||||| || |||||||||||| ||||||||||||| || Sbjct: 1376 atatgatacatgtgatatcaaccag-----gaaagaattggaaaacaagaattcaactag 1322 Query: 90 g-aactgtaccgttgga---taaattacaccaaacatggggtagaaaacacttaagagga 145 | |||||||||| |||| ||| ||||| ||||||| ||||| ||| ||| |||||| | Sbjct: 1321 gcaactgtaccggtggatggtaacttacagcaaacat-gggtaaaaaccac-taagagaa 1264 Query: 146 ctctgcatggtggaagggtggagctatagggagaagagccccaacctgccgagtaaaagc 205 ||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||||| || Sbjct: 1263 ctctgcatgatggaagggtggagctttagggacaagagccccaacctgccg-gtaaacgc 1205 Query: 206 catctatcctgccgcggtaattcaggtgcagcactatatgtgctcctcgcctcctcagac 265 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1204 catctatcctgccgccgtaattcaggtgcagcactacatgtgctcctcgcctcctcagac 1145 Query: 266 tctaccgaactatttgattgttccagcagccagagcaaagatcagataagccttagctca 325 |||| | |||| ||||||| ||||||||| |||||| ||||||||||||||| ||||| Sbjct: 1144 tctaacaaactgcttgattgctccagcagctagagcagagatcagataagcctcagctcg 1085 Query: 326 tactcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctct 385 || ||||| ||||||||||| || ||||||||||| || ||||| |||||||||||||| Sbjct: 1084 tattcaccggccattgtgatatacctaacccaagggagggcctggtatccacttttctcg 1025 Query: 386 ataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttc 445 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 atgactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttc 965 Query: 446 acacgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaaggcta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 acacgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaaggcta 905 Query: 506 aattctgctctacacatatattccttgccaccaggaaatgatttgattttccagaccatt 565 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 904 aactctgctctacacatatattccttgccaccaggaaatgatttaattttccagacca-t 846 Query: 566 tgcgtctctctcaggtgcatatgccgcagaacccattgaagtccttatatttggggtttg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 845 tgcgtctctctcaggtgcatatgccgcagaacccattgaagtccttatattt-gggtttg 787 Query: 626 tggcatcatagggcacaggcacttcaatttc 656 | ||||||||||| ||||| ||||||||||| Sbjct: 786 tcgcatcatagggtacaggtacttcaatttc 756
>dbj|AK065138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A10, full insert sequence Length = 1899 Score = 355 bits (179), Expect = 1e-94 Identities = 270/299 (90%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 322 ctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatccactttt 381 |||||| |||||||||||||||||||||| ||||||||| || |||||||||||||| || Sbjct: 1499 ctcatattcaccagccattgtgatgtatcgaacccaaggaagggcctgatatccactctt 1440 Query: 382 ctctataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaa 441 || || | ||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1439 ttcgatgattttcagatagcgaacctgaatacccgacacggtaaaatacggtatctcaaa 1380 Query: 442 tttcacacgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaag 501 |||||||||||| ||||||||||||||||| || | ||||| || || ||||| ||||| Sbjct: 1379 tttcacacgtatcggagccttcttttcaggcattccatcttctgatgttatgcttggaag 1320 Query: 502 gctaaattctgctctacacatatattccttgccaccaggaaatgatttgattttccagac 561 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1319 gctaaattctgctctacacatatattccttgccaccaggaaatgattttattttccagac 1260 Query: 562 catttgcgtctctctcaggtgcatatgccgcagaacccattgaagtccttatatttggg 620 || | || |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1259 ca-tcgcatctctctcaggtgcatatgccgcagagcccattgaagttcttatatttggg 1202
>gb|AY109738.1| Zea mays CL9467_1 mRNA sequence Length = 1356 Score = 289 bits (146), Expect = 6e-75 Identities = 298/346 (86%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 311 ataagccttagctcatactcaccagccattgtgatgtatctaacccaaggcagagcctga 370 ||||| || |||||||| || |||||||| ||||| ||||||||||| || || ||||| Sbjct: 442 ataagtctcagctcatattcgccagccatcgtgatatatctaacccaggggagtgcctgg 501 Query: 371 tatccacttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatag 430 || ||||| || || || | ||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 502 taaccactcttttcaattatcttcagataacggacctgaatacctgatacggtgaaatat 561 Query: 431 ggtatctcaaatttcacacgtattggagccttcttttcaggggttgcttcttccgaggta 490 ||||||||||||||||| |||||||| ||||||||||| |||| ||||||||| || Sbjct: 562 ggtatctcaaatttcactcgtattggtgccttcttttctggggccccttcttccgctgtt 621 Query: 491 atgctgggaaggctaaattctgctctacacatatattccttgccaccaggaaatgatttg 550 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 622 atgctaggaagactaaattctgctctgcacatgtattccttgccaccagggaatgatttt 681 Query: 551 attttccagaccatttgcgtctctctcaggtgcatatgccgcagaacccattgaagtcct 610 | ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct: 682 actttccagacca-ttgcatctctctcaggagcatatgcagcagaacccattgaagttct 740 Query: 611 tatatttggggtttgtggcatcatagggcacaggcacttcaatttc 656 ||||||| |||||||||||||| | || ||||||||||||||||| Sbjct: 741 tatattt-gggtttgtggcatctgaaggaacaggcacttcaatttc 785
>ref|NM_192230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 254 bits (128), Expect = 3e-64 Identities = 280/328 (85%), Gaps = 2/328 (0%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 1268 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 1209 Query: 389 actttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttcaca 448 | |||||||| ||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 1208 atcttcagatagcgaacctgaatacccgacacagtgaaatatggtatctcaaatttcact 1149 Query: 449 cgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaaggctaaat 508 |||||||| |||||||||||||| | ||||||||| | || || || ||||| |||||| Sbjct: 1148 cgtattggtgccttcttttcaggagctgcttcttctgcagttatacttggaagactaaat 1089 Query: 509 tctgctctacacatatattccttgccaccaggaaatgatttgattttccagaccatttgc 568 || ||||| ||||| || ||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 1088 tcagctctgcacatgtaatccttgccaccaggaaatgattttactttccagacca-ttgc 1030 Query: 569 gtctctctcaggtgcatatgccgcagaacccattgaagtccttatatttggggtttgtgg 628 |||||||||||||||||||| ||||| ||||||||||| |||||| || ||||| || | Sbjct: 1029 atctctctcaggtgcatatgcagcagagcccattgaagttcttata-ttagggttcgtag 971 Query: 629 catcatagggcacaggcacttcaatttc 656 |||| | || ||||||||||||||||| Sbjct: 970 catctgaaggaacaggcacttcaatttc 943
>dbj|AK065538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K02, full insert sequence Length = 1892 Score = 254 bits (128), Expect = 3e-64 Identities = 280/328 (85%), Gaps = 2/328 (0%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 1511 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 1452 Query: 389 actttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttcaca 448 | |||||||| ||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 1451 atcttcagatagcgaacctgaatacccgacacagtgaaatatggtatctcaaatttcact 1392 Query: 449 cgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaaggctaaat 508 |||||||| |||||||||||||| | ||||||||| | || || || ||||| |||||| Sbjct: 1391 cgtattggtgccttcttttcaggagctgcttcttctgcagttatacttggaagactaaat 1332 Query: 509 tctgctctacacatatattccttgccaccaggaaatgatttgattttccagaccatttgc 568 || ||||| ||||| || ||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 1331 tcagctctgcacatgtaatccttgccaccaggaaatgattttactttccagacca-ttgc 1273 Query: 569 gtctctctcaggtgcatatgccgcagaacccattgaagtccttatatttggggtttgtgg 628 |||||||||||||||||||| ||||| ||||||||||| |||||| || ||||| || | Sbjct: 1272 atctctctcaggtgcatatgcagcagagcccattgaagttcttata-ttagggttcgtag 1214 Query: 629 catcatagggcacaggcacttcaatttc 656 |||| | || ||||||||||||||||| Sbjct: 1213 catctgaaggaacaggcacttcaatttc 1186
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 149 bits (75), Expect = 1e-32 Identities = 114/127 (89%) Strand = Plus / Plus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagccttc 463 |||||||| || || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 28308 acctgaatacccgacacggtaaaatacggtatctcaaatttcacacgtatcggagccttc 28367 Query: 464 ttttcaggggttgcttcttccgaggtaatgctgggaaggctaaattctgctctacacata 523 |||||||| || | ||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 28368 ttttcaggcattccatcttctgatgttatgcttggaaggctaaattctgctctacacata 28427 Query: 524 tattcct 530 ||||||| Sbjct: 28428 tattcct 28434 Score = 129 bits (65), Expect = 1e-26 Identities = 87/93 (93%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 528 ccttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatat 587 |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct: 28522 ccttgccaccaggaaatgattttattttccagaccatc-gcatctctctcaggtgcatat 28580 Query: 588 gccgcagaacccattgaagtccttatatttggg 620 |||||||| ||||||||||| |||||||||||| Sbjct: 28581 gccgcagagcccattgaagttcttatatttggg 28613 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 322 ctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatccactttt 381 |||||| |||||||||||||||||||||| ||||||||| || |||||||||||||| || Sbjct: 28134 ctcatattcaccagccattgtgatgtatcgaacccaaggaagggcctgatatccactctt 28193 Query: 382 ctctataactttcagataacgaacctg 408 || || | ||||||||| |||||||| Sbjct: 28194 ttcgatgattttcagatagcgaacctg 28220
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 114/127 (89%) Strand = Plus / Plus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagccttc 463 |||||||| || || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 26746369 acctgaatacccgacacggtaaaatacggtatctcaaatttcacacgtatcggagccttc 26746428 Query: 464 ttttcaggggttgcttcttccgaggtaatgctgggaaggctaaattctgctctacacata 523 |||||||| || | ||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 26746429 ttttcaggcattccatcttctgatgttatgcttggaaggctaaattctgctctacacata 26746488 Query: 524 tattcct 530 ||||||| Sbjct: 26746489 tattcct 26746495 Score = 129 bits (65), Expect = 1e-26 Identities = 87/93 (93%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 528 ccttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatat 587 |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct: 26746583 ccttgccaccaggaaatgattttattttccagaccatc-gcatctctctcaggtgcatat 26746641 Query: 588 gccgcagaacccattgaagtccttatatttggg 620 |||||||| ||||||||||| |||||||||||| Sbjct: 26746642 gccgcagagcccattgaagttcttatatttggg 26746674 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 322 ctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatccactttt 381 |||||| |||||||||||||||||||||| ||||||||| || |||||||||||||| || Sbjct: 26746195 ctcatattcaccagccattgtgatgtatcgaacccaaggaagggcctgatatccactctt 26746254 Query: 382 ctctataactttcagataacgaacctg 408 || || | ||||||||| |||||||| Sbjct: 26746255 ttcgatgattttcagatagcgaacctg 26746281
>dbj|AK060762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A04, full insert sequence Length = 1867 Score = 135 bits (68), Expect = 2e-28 Identities = 158/188 (84%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 1487 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 1428 Query: 389 actttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttcaca 448 | |||||||| ||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 1427 atcttcagatagcgaacctgaatacccgacacagtgaaatatggtatctcaaatttcact 1368 Query: 449 cgtattggagccttcttttcaggggttgcttcttccgaggtaatgctgggaaggctaaat 508 |||||||| |||||||||||||| | ||||||||| | || || || ||||| |||||| Sbjct: 1367 cgtattggtgccttcttttcaggagctgcttcttctgcagttatacttggaagactaaat 1308 Query: 509 tctgctct 516 || ||||| Sbjct: 1307 tcagctct 1300 Score = 119 bits (60), Expect = 1e-23 Identities = 113/128 (88%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 529 cttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatatg 588 ||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 1301 cttgccaccaggaaatgattttactttccagaccatt-gcatctctctcaggtgcatatg 1243 Query: 589 ccgcagaacccattgaagtccttatatttggggtttgtggcatcatagggcacaggcact 648 | ||||| ||||||||||| |||||| || ||||| || ||||| | || ||||||||| Sbjct: 1242 cagcagagcccattgaagttcttata-ttagggttcgtagcatctgaaggaacaggcact 1184 Query: 649 tcaatttc 656 |||||||| Sbjct: 1183 tcaatttc 1176
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 3e-24 Identities = 114/129 (88%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 528 ccttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatat 587 |||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||| Sbjct: 29162860 ccttgccaccaggaaatgattttactttccagaccatt-gcatctctctcaggtgcatat 29162802 Query: 588 gccgcagaacccattgaagtccttatatttggggtttgtggcatcatagggcacaggcac 647 || ||||| ||||||||||| |||||| || ||||| || ||||| | || |||||||| Sbjct: 29162801 gcagcagagcccattgaagttcttata-ttagggttcgtagcatctgaaggaacaggcac 29162743 Query: 648 ttcaatttc 656 ||||||||| Sbjct: 29162742 ttcaatttc 29162734 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagccttc 463 |||||||| || || || || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 29163065 acctgaatacccgacacagtgaaatatggtatctcaaatttcactcgtattggtgccttc 29163006 Query: 464 ttttcaggggttgcttcttccgaggtaatgctgggaaggctaaattctgctctacacat 522 |||||||| | ||||||||| | || || || ||||| |||||||| ||||| ||||| Sbjct: 29163005 ttttcaggagctgcttcttctgcagttatacttggaagactaaattcagctctgcacat 29162947 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 29163237 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 29163178 Query: 389 actttcagataacgaacctg 408 | |||||||| |||||||| Sbjct: 29163177 atcttcagatagcgaacctg 29163158
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 121 bits (61), Expect = 3e-24 Identities = 114/129 (88%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 528 ccttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatat 587 |||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||| Sbjct: 123226 ccttgccaccaggaaatgattttactttccagaccatt-gcatctctctcaggtgcatat 123168 Query: 588 gccgcagaacccattgaagtccttatatttggggtttgtggcatcatagggcacaggcac 647 || ||||| ||||||||||| |||||| || ||||| || ||||| | || |||||||| Sbjct: 123167 gcagcagagcccattgaagttcttata-ttagggttcgtagcatctgaaggaacaggcac 123109 Query: 648 ttcaatttc 656 ||||||||| Sbjct: 123108 ttcaatttc 123100 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagccttc 463 |||||||| || || || || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 123431 acctgaatacccgacacagtgaaatatggtatctcaaatttcactcgtattggtgccttc 123372 Query: 464 ttttcaggggttgcttcttccgaggtaatgctgggaaggctaaattctgctctacacat 522 |||||||| | ||||||||| | || || || ||||| |||||||| ||||| ||||| Sbjct: 123371 ttttcaggagctgcttcttctgcagttatacttggaagactaaattcagctctgcacat 123313 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 123603 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 123544 Query: 389 actttcagataacgaacctg 408 | |||||||| |||||||| Sbjct: 123543 atcttcagatagcgaacctg 123524
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 121 bits (61), Expect = 3e-24 Identities = 114/129 (88%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 528 ccttgccaccaggaaatgatttgattttccagaccatttgcgtctctctcaggtgcatat 587 |||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||| Sbjct: 8647 ccttgccaccaggaaatgattttactttccagaccatt-gcatctctctcaggtgcatat 8589 Query: 588 gccgcagaacccattgaagtccttatatttggggtttgtggcatcatagggcacaggcac 647 || ||||| ||||||||||| |||||| || ||||| || ||||| | || |||||||| Sbjct: 8588 gcagcagagcccattgaagttcttata-ttagggttcgtagcatctgaaggaacaggcac 8530 Query: 648 ttcaatttc 656 ||||||||| Sbjct: 8529 ttcaatttc 8521 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagccttc 463 |||||||| || || || || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 8852 acctgaatacccgacacagtgaaatatggtatctcaaatttcactcgtattggtgccttc 8793 Query: 464 ttttcaggggttgcttcttccgaggtaatgctgggaaggctaaattctgctctacacat 522 |||||||| | ||||||||| | || || || ||||| |||||||| ||||| ||||| Sbjct: 8792 ttttcaggagctgcttcttctgcagttatacttggaagactaaattcagctctgcacat 8734 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 329 tcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctctata 388 |||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 9024 tcaccagccattgtaatgtatctaacccaaggaagcgcctggtacccactcttttcaatg 8965 Query: 389 actttcagataacgaacctg 408 | |||||||| |||||||| Sbjct: 8964 atcttcagatagcgaacctg 8945
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 ataagccttagctcatactcaccagccattgtgatgtatctaacccaaggcagagcctga 370 ||||||||||| |||||||| ||||||||||| |||||||| ||||| || ||||||||| Sbjct: 60063 ataagccttagttcatactctccagccattgttatgtatctcacccacggaagagcctga 60004 Query: 371 tatccacttttctctataa 389 || ||||||||||| |||| Sbjct: 60003 tacccacttttctcaataa 59985 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Minus Query: 416 gaaacggtaaaatagggtatctcaaatttcacacgtattggagccttcttttcaggggtt 475 ||||| |||||||| ||||| ||||||||||||||||| ||||| || | ||||||||| Sbjct: 59349 gaaacagtaaaataaggtatttcaaatttcacacgtataggagcttttctctcaggggtt 59290 Query: 476 gcttcttccgaggtaatgctgggaaggctaaattctgctctacacatatattcct 530 ||||| || | || || |||||||| | ||| |||||||| ||||||| |||| Sbjct: 59289 gcttcctcagctgttatactgggaagacgaaactctgctcttaacatatactcct 59235 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 576 tcaggtgcatatgccgcagaacccattgaagt 607 |||||||||||||| ||||| ||||||||||| Sbjct: 59083 tcaggtgcatatgctgcagatcccattgaagt 59052
>ref|NM_104761.3| Arabidopsis thaliana unknown protein AT1G60780 mRNA, complete cds Length = 1897 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Minus Query: 317 cttagctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatcca 376 ||||| || |||||||||||||| || |||||||| ||||| || || || || || ||| Sbjct: 1551 cttagttcgtactcaccagccatggttatgtatctcacccatggaagtgcttggtaccca 1492 Query: 377 cttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatc 436 || ||||| |||| || || || ||||||||||| |||||||| || ||||| || ||| Sbjct: 1491 ctcttctcaataatctttaggtaccgaacctgaatccctgaaacagtgaaataagggatc 1432 Query: 437 tcaaatttcacacgtattggagcctt 462 |||||||| ||||| || |||||||| Sbjct: 1431 tcaaatttgacacggataggagcctt 1406
>gb|AY099652.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1690 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Minus Query: 317 cttagctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatcca 376 ||||| || |||||||||||||| || |||||||| ||||| || || || || || ||| Sbjct: 1470 cttagttcgtactcaccagccatggttatgtatctcacccatggaagtgcttggtaccca 1411 Query: 377 cttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatc 436 || ||||| |||| || || || ||||||||||| |||||||| || ||||| || ||| Sbjct: 1410 ctcttctcaataatctttaggtaccgaacctgaatccctgaaacagtgaaataagggatc 1351 Query: 437 tcaaatttcacacgtattggagcctt 462 |||||||| ||||| || |||||||| Sbjct: 1350 tcaaatttgacacggataggagcctt 1325
>gb|BT002144.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1360 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Minus Query: 317 cttagctcatactcaccagccattgtgatgtatctaacccaaggcagagcctgatatcca 376 ||||| || |||||||||||||| || |||||||| ||||| || || || || || ||| Sbjct: 1277 cttagttcgtactcaccagccatggttatgtatctcacccatggaagtgcttggtaccca 1218 Query: 377 cttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatc 436 || ||||| |||| || || || ||||||||||| |||||||| || ||||| || ||| Sbjct: 1217 ctcttctcaataatctttaggtaccgaacctgaatccctgaaacagtgaaataagggatc 1158 Query: 437 tcaaatttcacacgtattggagcctt 462 |||||||| ||||| || |||||||| Sbjct: 1157 tcaaatttgacacggataggagcctt 1132
>dbj|AK173835.1| Ciona intestinalis cDNA, clone:cicl003i09, full insert sequence Length = 744 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccacttttctctat 387 ||||||||| || |||||||||||||| || ||||||||||||||||| Sbjct: 434 tgtgatgtacctcacccaaggcagagcttggtatccacttttctctat 387
>dbj|AK116666.1| Ciona intestinalis cDNA, clone:cicl015h18, full insert sequence Length = 1658 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccacttttctctat 387 ||||||||| || |||||||||||||| || ||||||||||||||||| Sbjct: 1320 tgtgatgtacctcacccaaggcagagcttggtatccacttttctctat 1273
>ref|NM_060773.3| Caenorhabditis elegans UNCoordinated family member (unc-101) (unc-101) mRNA, complete cds Length = 1879 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 368 tgatatccacttttctctataactttcagataacgaacctgaatgcc 414 ||||||||||||||||| || | |||||||||||| ||||||||||| Sbjct: 1314 tgatatccacttttctcgatgattttcagataacggacctgaatgcc 1268
>ref|XM_740665.1| Plasmodium chabaudi chabaudi clathrin-adaptor medium chain (PC000656.01.0) partial mRNA Length = 1356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccacttttctctataactttcagata 399 |||||| |||||||||||||||| ||| ||||| |||||||| || |||| ||| | ||| Sbjct: 1323 tgtgatatatctaacccaaggcaaagcttgataaccacttttttcaataatttttaaata 1264 Query: 400 acgaacctgaatgcctgaaacggtaaaatagggtatctcaaattt 444 ||| || || |||||||| |||||||| || || |||||||| Sbjct: 1263 acgtacagttatacctgaaacagtaaaatatgggatttcaaattt 1219
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 404 acctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggagcctt 462 |||||||| |||||||| || ||||| || ||||||||||| ||||| || |||||||| Sbjct: 93457 acctgaatccctgaaacagtgaaataagggatctcaaatttgacacggataggagcctt 93515 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 317 cttagctcatactcaccagccattgtgatgtatctaaccca 357 ||||| || |||||||||||||| || |||||||| ||||| Sbjct: 93289 cttagttcgtactcaccagccatggttatgtatctcaccca 93329
>emb|Z83115.1|CEK11D2 Caenorhabditis elegans Cosmid K11D2, complete sequence Length = 26806 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 tgatatccacttttctctataactttcagataacgaacctgaa 410 ||||||||||||||||| || | |||||||||||| ||||||| Sbjct: 12186 tgatatccacttttctcgatgattttcagataacggacctgaa 12144
>gb|L26291.1|CELUNCA Caenorhabditis elegans (unc-101) mRNA, complete cds Length = 1883 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 368 tgatatccacttttctctataactttcagataacgaacctgaatgcc 414 |||||||| |||||||| || | |||||||||||| ||||||||||| Sbjct: 1285 tgatatcctcttttctcgatgattttcagataacggacctgaatgcc 1239
>ref|XM_725640.1| Plasmodium yoelii yoelii str. 17XNL clathrin coat assembly protein ap54 (PY02804) partial mRNA Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccactttt 381 |||||| |||||||||||||||| ||| ||||| |||||||| Sbjct: 1347 tgtgatatatctaacccaaggcaaagcttgataaccactttt 1306
>ref|XM_675242.1| Plasmodium berghei strain ANKA clathrin-adaptor medium chain, (PB001132.00.0) partial mRNA Length = 1377 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccactttt 381 |||||| |||||||||||||||| ||| ||||| |||||||| Sbjct: 1344 tgtgatatatctaacccaaggcaaagcttgataaccactttt 1303
>emb|CR760351.2| Xenopus tropicalis finished cDNA, clone TNeu104l10 Length = 1784 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 401 cgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttcacacgtattggag 458 ||||||||||| || ||| |||||||||||||||||||| ||||||| ||||||| Sbjct: 1320 cgaacctgaattccagaagttgtaaaatagggtatctcaaacttcacactgattggag 1263
>gb|BC061393.1| Xenopus tropicalis hypothetical protein MGC75970, mRNA (cDNA clone MGC:75970 IMAGE:5384222), complete cds Length = 1835 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 422 gtaaaatagggtatctcaaatttcacacgtattggag 458 |||||||||||||||||||| ||||||| ||||||| Sbjct: 1390 gtaaaatagggtatctcaaacttcacactgattggag 1354
>ref|NM_009678.1| Mus musculus adaptor protein complex AP-1, mu 2 subunit (Ap1m2), mRNA Length = 1703 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 1285 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 1226 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 1225 ccagaaacggtaaagtatggaatctcaaa 1197
>ref|NM_203702.1| Xenopus tropicalis hypothetical protein MGC75970 (MGC75970), mRNA Length = 1835 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 422 gtaaaatagggtatctcaaatttcacacgtattggag 458 |||||||||||||||||||| ||||||| ||||||| Sbjct: 1390 gtaaaatagggtatctcaaacttcacactgattggag 1354
>gb|BC003704.1| Mus musculus adaptor protein complex AP-1, mu 2 subunit, mRNA (cDNA clone MGC:5661 IMAGE:3488231), complete cds Length = 1701 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 1250 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 1191 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 1190 ccagaaacggtaaagtatggaatctcaaa 1162
>dbj|AK010478.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410012N05 product:adaptor protein complex AP-1, mu 2 subunit, full insert sequence Length = 1714 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 1296 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 1237 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 1236 ccagaaacggtaaagtatggaatctcaaa 1208
>dbj|AK041933.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630047K13 product:weakly similar to ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 2 SUBUNIT (CLATHRIN COAT ASSEMBLY PROTEIN AP47 2) (CLATHRIN COAT ASSOCIATED PROTEIN AP47 2) (GOLGI ADAPTOR AP-1 47 KDA PROTEIN) (HA1 47 KDA SUBUNIT 2) (CLATHRIN ASSEMBLY PROTEIN ASSEMBLY PROTEIN COMPLEX 1 MEDIUM CHAIN 2) (AP-MU CHAIN FAMILY MEMBER MU1B) [Mus musculus], full insert sequence Length = 1352 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 89 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 30 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 29 ccagaaacggtaaagtatggaatctcaaa 1
>dbj|AK082674.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230082G12 product:adaptor protein complex AP-1, mu 2 subunit, full insert sequence Length = 3602 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 1174 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 1115 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 1114 ccagaaacggtaaagtatggaatctcaaa 1086
>gb|AF067146.1|AF067146 Mus musculus clathrin adaptor medium chain protein MU1B (Mu1b) mRNA, complete cds Length = 1703 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 353 acccaaggcagagcctgatatccacttttctctataactttcagataacgaacctgaatg 412 ||||| ||||| ||||| || ||||||||||| || | |||| ||||| ||||| ||| Sbjct: 1285 acccagggcagggcctggtacccacttttctcgatgatcttcatgtaacggacctggatg 1226 Query: 413 cctgaaacggtaaaatagggtatctcaaa 441 || ||||||||||| || || |||||||| Sbjct: 1225 ccagaaacggtaaagtatggaatctcaaa 1197
>gb|AY810336.1| Schistosoma japonicum SJCHGC09053 protein mRNA, partial cds Length = 1273 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 425 aaatagggtatctcaaatttcaca 448 |||||||||||||||||||||||| Sbjct: 1157 aaatagggtatctcaaatttcaca 1134
>ref|NM_001006850.1| Xenopus tropicalis adaptor-related protein complex 1, mu 1 subunit (ap1m1), mRNA Length = 3062 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 371 tatccacttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatag 430 |||||||||||||| || | |||| || ||||||||||| |||||||| || || ||| Sbjct: 1482 tatccacttttctcaatgatcttcatgtatcgaacctgaatccctgaaacagtgaagtag 1423 Query: 431 ggtatctcaaa 441 ||||| ||||| Sbjct: 1422 ggtatttcaaa 1412 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 527 tccttgccaccaggaaatgatttgattttcca 558 |||||||| || ||||||||||||||| |||| Sbjct: 1332 tccttgccccccggaaatgatttgattgtcca 1301
>gb|BC076939.1| Xenopus tropicalis adaptor-related protein complex 1, mu 1 subunit, mRNA (cDNA clone MGC:89273 IMAGE:6977081), complete cds Length = 3062 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 371 tatccacttttctctataactttcagataacgaacctgaatgcctgaaacggtaaaatag 430 |||||||||||||| || | |||| || ||||||||||| |||||||| || || ||| Sbjct: 1482 tatccacttttctcaatgatcttcatgtatcgaacctgaatccctgaaacagtgaagtag 1423 Query: 431 ggtatctcaaa 441 ||||| ||||| Sbjct: 1422 ggtatttcaaa 1412 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 527 tccttgccaccaggaaatgatttgattttcca 558 |||||||| || ||||||||||||||| |||| Sbjct: 1332 tccttgccccccggaaatgatttgattgtcca 1301
>ref|NM_100949.1| Arabidopsis thaliana unknown protein AT1G10730 mRNA, complete cds Length = 1287 Score = 44.1 bits (22), Expect = 0.57 Identities = 106/134 (79%) Strand = Plus / Minus Query: 326 tactcaccagccattgtgatgtatctaacccaaggcagagcctgatatccacttttctct 385 |||||||||||||| || || ||||| ||||| || | ||||| || ||||| ||||| Sbjct: 1268 tactcaccagccatggttatatatctcacccatggatgtgcctggtacccactcttctca 1209 Query: 386 ataactttcagataacgaacctgaatgcctgaaacggtaaaatagggtatctcaaatttc 445 || | ||||| || |||||||| || |||||||| | || | || ||||||||||| Sbjct: 1208 atgatcttcaggtatcgaacctgtattcctgaaactatgaattttgggatctcaaatttg 1149 Query: 446 acacgtattggagc 459 ||||| |||||||| Sbjct: 1148 acacggattggagc 1135
>ref|XM_660658.1| Cryptosporidium hominis TU502 clathrin-adaptor medium chain (Chro.70304) partial mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 344 atgtatctaacccaaggcagagcctgatatccacttttctct 385 |||||||| ||||| || |||||||||||||| || |||||| Sbjct: 1325 atgtatctcacccatggaagagcctgatatccgctcttctct 1284
>ref|XM_784523.1| PREDICTED: Strongylocentrotus purpuratus similar to adaptor-related protein complex 1, mu 1 subunit (LOC584669), mRNA Length = 1179 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 340 tgtgatgtatctaacccaaggcagagcctgatatccacttttctctataactttcagata 399 |||||||||||| ||||| || || ||||| || ||||| ||||| || | |||| || Sbjct: 1146 tgtgatgtatctcacccatggtagtgcctggtaaccactcttctcaatgatcttcaagta 1087 Query: 400 acgaacctgaatgcctga 417 ||||||||||||||||| Sbjct: 1086 ccgaacctgaatgcctga 1069
>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete sequence Length = 202842 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 377 cttttctctataactttcagataacg 402 ||||||||||||||||| |||||||| Sbjct: 49443 cttttctctataactttgagataacg 49468
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 341 gtgatgtatctaacccaaggcagagcctg 369 ||||| |||||||||||||| |||||||| Sbjct: 735942 gtgatatatctaacccaaggaagagcctg 735970 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 gaaacggtaaaatagggtatctcaaatttcac 447 ||||||||||| ||||| || ||||||||||| Sbjct: 736096 gaaacggtaaagtagggaatttcaaatttcac 736127
>gb|BC070627.1| Xenopus laevis hypothetical protein MGC81419, mRNA (cDNA clone MGC:81419 IMAGE:6635357), complete cds Length = 2529 Score = 42.1 bits (21), Expect = 2.3 Identities = 81/101 (80%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctctataactttcagataa 400 ||||| ||||| ||||| || || || || |||||||||||||| || | |||| || Sbjct: 1486 gtgatatatctgacccatggaagggcttggtatccacttttctcgatgatcttcatgtat 1427 Query: 401 cgaacctgaatgcctgaaacggtaaaatagggtatctcaaa 441 |||||||| || |||||||| || || |||||||| ||||| Sbjct: 1426 cgaacctggattcctgaaactgtgaagtagggtatttcaaa 1386 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 539 ggaaatgatttgattttccagacca 563 ||||||||||||||| ||||||||| Sbjct: 1294 ggaaatgatttgattgtccagacca 1270
>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 72022 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tatattccttgccaccaggaaatga 546 ||||||||||||||| ||||||||| Sbjct: 25169 tatattccttgccacaaggaaatga 25193
>gb|AY117037.1| Toxoplasma gondii mu1 adaptin (mu1) mRNA, complete cds Length = 1644 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccactttt 381 ||||||||||| ||||| || ||||| || ||||||||||| Sbjct: 1483 gtgatgtatctgacccacggaagagcttggtatccactttt 1443
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aaaatagggtatctcaaattt 444 ||||||||||||||||||||| Sbjct: 478105 aaaatagggtatctcaaattt 478085
>gb|AC121135.9| Mus musculus chromosome 18, clone RP23-328A22, complete sequence Length = 189515 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 625 gtggcatcatagggcacaggc 645 ||||||||||||||||||||| Sbjct: 74393 gtggcatcatagggcacaggc 74413
>emb|BX255916.7| Mouse DNA sequence from clone RP23-408N4 on chromosome 4, complete sequence Length = 119185 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 gacaagaattcaacaaggaactgta 97 |||||||| |||||||||||||||| Sbjct: 8803 gacaagaagtcaacaaggaactgta 8779
>gb|U81834.1|HSU81834 Human cosmid LL12NC01-95H4, ETV6 gene, exon 2 and partial cds Length = 36558 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tatattccttgccaccaggaaatga 546 ||||||||||||||| ||||||||| Sbjct: 11460 tatattccttgccacaaggaaatga 11436
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 cttccgaggtaatgctgggaaggc 503 ||||| |||||||||||||||||| Sbjct: 82899 cttcccaggtaatgctgggaaggc 82922
>ref|XM_512375.1| PREDICTED: Pan troglodytes similar to Adaptor-related protein complex 1, mu 2 subunit (LOC455710), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1937 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1894
>ref|NM_195864.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0035F15.9), mRNA Length = 2742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 778 agggagaagagccccaacct 797
>ref|NM_175498.3| Mus musculus paraneoplastic antigen MA2 (Pnma2), mRNA Length = 4365 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 1499 attgttccagcagccagagc 1480
>gb|BC065116.1| Mus musculus paraneoplastic antigen MA2, mRNA (cDNA clone MGC:86048 IMAGE:30618233), complete cds Length = 4365 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 1499 attgttccagcagccagagc 1480
>gb|BC003387.2| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:5039 IMAGE:3446133), complete cds Length = 1709 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1260 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1217
>gb|BC003612.2| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:1441 IMAGE:2988458), complete cds Length = 1707 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1259 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1216
>gb|BC005021.1| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:12546 IMAGE:3139433), complete cds Length = 1810 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1328 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1285
>gb|AC131596.10| Mus musculus chromosome 10, clone RP23-476G10, complete sequence Length = 178668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 tattccttgccaccaggaaa 543 |||||||||||||||||||| Sbjct: 116933 tattccttgccaccaggaaa 116952
>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence Length = 194871 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ttgttccagcagccagagca 302 |||||||||||||||||||| Sbjct: 151108 ttgttccagcagccagagca 151127
>emb|CR974434.12| Pig DNA sequence from clone CH242-241E19 on chromosome 7, complete sequence Length = 186072 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 attccttgccaccaggaaat 544 |||||||||||||||||||| Sbjct: 55271 attccttgccaccaggaaat 55290
>ref|NM_005498.3| Homo sapiens adaptor-related protein complex 1, mu 2 subunit (AP1M2), mRNA Length = 1749 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1322 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1279
>emb|AL136181.13| Human DNA sequence from clone RP11-35J23 on chromosome 10 Contains two novel genes, the DNTT gene for terminal deoxynucleotidyltransferase (TDT), the TMEM10 gene for transmembrane protein 10 (TMP10, HTMP10) and the 3' end of the TLL2 gene for tolloid-like 2, complete sequence Length = 146909 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 atcaactaggaaaagaaaga 65 |||||||||||||||||||| Sbjct: 31848 atcaactaggaaaagaaaga 31867
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ttctctataactttcagata 399 |||||||||||||||||||| Sbjct: 4531 ttctctataactttcagata 4550
>gb|AY152834.1| Felis catus clone PAC f2 major histocompatiblity complex classical class II region, partial sequence Length = 64168 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ttctctataactttcagata 399 |||||||||||||||||||| Sbjct: 46943 ttctctataactttcagata 46962
>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical class II region, partial sequence Length = 77680 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ttctctataactttcagata 399 |||||||||||||||||||| Sbjct: 26477 ttctctataactttcagata 26496
>emb|BX004811.6| Zebrafish DNA sequence from clone BUSM1-118J2 in linkage group 3 Contains two novel genes similar to zebrafish ba2 (globin ba2), six novel genes for alpha-globins, two novel genes similar to zebrafish bE1 (embryonic 1 beta-globin), the zebrafish bE1 gene for embryonic 1 beta-globin and a novel gene, complete sequence Length = 80760 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ttttctctataactttcaga 397 |||||||||||||||||||| Sbjct: 41576 ttttctctataactttcaga 41595
>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence Length = 197531 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 65269 attgttccagcagccagagc 65250
>emb|AL845551.2| Zebrafish DNA sequence from clone XX-119C3 Contains 3 novel genes for alpha-type globins and one novel gene for a beta-type globin, complete sequence Length = 40374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ttttctctataactttcaga 397 |||||||||||||||||||| Sbjct: 13751 ttttctctataactttcaga 13770
>gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0035F15, complete sequence Length = 138335 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 65084 agggagaagagccccaacct 65103
>emb|CR615885.1| full-length cDNA clone CS0DI067YN09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1647 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1247 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1204
>gb|AC011475.6| Homo sapiens chromosome 19 clone CTC-539A10, complete sequence Length = 179953 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 153498 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 153455
>dbj|AK220357.1| Mus musculus mRNA for mKIAA0883 protein Length = 5438 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 1623 attgttccagcagccagagc 1604
>gb|AC093277.3| Homo sapiens chromosome 5 clone RP11-386E5, complete sequence Length = 58894 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 cttttctctataactttcag 396 |||||||||||||||||||| Sbjct: 27430 cttttctctataactttcag 27449
>emb|CR596228.1| full-length cDNA clone CS0DI036YB05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1638 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1238 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1195
>dbj|AK023863.1| Homo sapiens cDNA FLJ13801 fis, clone THYRO1000173, highly similar to Homo sapiens AP-mu chain family member mu1B (HSMU1B) mRNA Length = 1751 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1323 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1280
>gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complete sequence Length = 185556 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aattcaggtgcagcactata 243 |||||||||||||||||||| Sbjct: 51590 aattcaggtgcagcactata 51609
>dbj|AK160161.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810009H13 product:adaptor protein complex AP-1, mu 2 subunit, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 398 taacgaacctgaatgcctgaaacggtaaaatagggtatctcaaa 441 ||||| ||||| ||||| ||||||||||| || || |||||||| Sbjct: 1237 taacggacctggatgccagaaacggtaaagtatggaatctcaaa 1194
>ref|XM_572014.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1392 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcct 368 ||||| |||||||||||||| ||||||| Sbjct: 1261 gtgatatatctaacccaaggaagagcct 1234 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 416 gaaacggtaaaatagggtatctcaaatttcac 447 ||||||||||| ||||| || ||||||||||| Sbjct: 1186 gaaacggtaaagtagggaatttcaaatttcac 1155
>tpg|BK000084.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like H1 gene, complete cds Length = 5600 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 3090 agggagaagagccccaacct 3109
>dbj|AK043910.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830049P17 product:similar to KIAA0883 PROTEIN (PARANEOPLASTIC ASSOCIATED BRAIN-TESTIS-CANCER ANTIGEN) [Homo sapiens], full insert sequence Length = 3149 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 1538 attgttccagcagccagagc 1519
>dbj|AK043718.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830023H14 product:similar to KIAA0883 PROTEIN (PARANEOPLASTIC ASSOCIATED BRAIN-TESTIS-CANCER ANTIGEN) [Homo sapiens], full insert sequence Length = 2257 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 1616 attgttccagcagccagagc 1597
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 9577011 agggagaagagccccaacct 9577030
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 atatccacttttctctataa 389 |||||||||||||||||||| Sbjct: 70027 atatccacttttctctataa 70046
>dbj|AK222946.1| Homo sapiens mRNA for adaptor-related protein complex 1, mu 2 subunit variant, clone: HRC09763 Length = 1616 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1288 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1245
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 atatccacttttctctataa 389 |||||||||||||||||||| Sbjct: 17075 atatccacttttctctataa 17056
>gb|AF435646.1| Oryza sativa CSLH1 mRNA, partial cds Length = 2393 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 759 agggagaagagccccaacct 778
>gb|AF020797.2|AF020797 Homo sapiens AP-mu chain family member mu1B (HSMU1B) mRNA, complete cds Length = 1711 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 gtgatgtatctaacccaaggcagagcctgatatccacttttctc 384 |||||||| | |||||| ||||| ||||| || ||||||||||| Sbjct: 1285 gtgatgtagcgaacccagggcagggcctggtaaccacttttctc 1242
>gb|AC135452.2| Homo sapiens 3 BAC RP11-507A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137095 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 attgttccagcagccagagcaaag 305 |||||||||||||||| ||||||| Sbjct: 33613 attgttccagcagccatagcaaag 33590
>dbj|AK121003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B21, full insert sequence Length = 2658 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 824 agggagaagagccccaacct 843
>gb|AC007869.2|AC007869 Genomic Sequence for Homo sapiens Clone 431C18 From Chromosome 8 (locus D8S1741), complete sequence Length = 196905 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 gaagggtggagctatagggagaag 181 |||||||||||||| ||||||||| Sbjct: 38500 gaagggtggagctaaagggagaag 38477
>gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, complete sequence Length = 165073 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 caggaaatgatttgattttc 556 |||||||||||||||||||| Sbjct: 89674 caggaaatgatttgattttc 89693
>dbj|AK069071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H01, full insert sequence Length = 2386 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 783 agggagaagagccccaacct 802
>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tggagctatagggagaagag 183 |||||||||||||||||||| Sbjct: 144469 tggagctatagggagaagag 144488
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agggagaagagccccaacct 192 |||||||||||||||||||| Sbjct: 9583050 agggagaagagccccaacct 9583069
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ttgttccagcagccagagca 302 |||||||||||||||||||| Sbjct: 50995 ttgttccagcagccagagca 51014
>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete sequence Length = 216332 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 attgttccagcagccagagc 301 |||||||||||||||||||| Sbjct: 200270 attgttccagcagccagagc 200289
>gb|AC027124.5| Homo sapiens chromosome 3 clone RP11-449E21 map 3p, complete sequence Length = 208989 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 atatccacttttctctataa 389 |||||||||||||||||||| Sbjct: 40060 atatccacttttctctataa 40079 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,376,919 Number of Sequences: 3902068 Number of extensions: 6376919 Number of successful extensions: 109231 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 108912 Number of HSP's gapped (non-prelim): 296 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
