ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23j12 |
|---|---|
| Clone Library Name | barley_pub |
>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)| (Fertility restorer) (Restorer for CMS) Length = 791 Score = 63.9 bits (154), Expect = 5e-10 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 2/159 (1%) Frame = -2 Query: 720 LIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEG 541 LI AY K+ D+ V MR+ TY VI ++G ++ F QM EG Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436 Query: 540 MKPDTKTFCCLINGFSNAALFHKVVGMVKLAERLD--VPPNTSFHNSVLAACAKAEDLME 367 + P + LI+G + + ++ E LD + NT F NS++ + K ++E Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELI--LEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494 Query: 366 MERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYAL 250 E++F M + +P+ ITY+ L+ Y G D+ L Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533 Score = 58.2 bits (139), Expect = 3e-08 Identities = 36/157 (22%), Positives = 68/157 (43%) Frame = -2 Query: 720 LIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEG 541 +I + K+ DK + M TYN++I A +A + N M G Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261 Query: 540 MKPDTKTFCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEME 361 + PD T+ +++G+ ++ + +G +K V P+ ++ ++ K ME Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321 Query: 360 RVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYAL 250 ++F M +P+ TY LL+ Y +G +M+ L Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358 Score = 57.0 bits (136), Expect = 6e-08 Identities = 32/123 (26%), Positives = 55/123 (44%) Frame = -2 Query: 642 PWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVG 463 P +Y VI F + GD+ T+++M G+ PD T+ +I A K + Sbjct: 193 PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252 Query: 462 MVKLAERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYR 283 ++ + V P+ +NS+L + E + M+ EPD +TYS+L++ Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312 Query: 282 KEG 274 K G Sbjct: 313 KNG 315 Score = 54.3 bits (129), Expect = 4e-07 Identities = 35/152 (23%), Positives = 65/152 (42%) Frame = -2 Query: 720 LIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEG 541 +I ++ K+ + + E M R+ TYN +I + AG + M S G Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541 Query: 540 MKPDTKTFCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEME 361 +KP+T T+ LING+ + + + K E V P+ +N +L + + Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601 Query: 360 RVFRHMKHMQCEPDAITYSILLEAYRKEGMTD 265 ++ + + + TY+I+L K +TD Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTD 633 Score = 53.5 bits (127), Expect = 6e-07 Identities = 29/114 (25%), Positives = 58/114 (50%) Frame = -2 Query: 633 TATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVK 454 T +N++I++ + G E F M G+KP+ T+ LING+ A + + ++ Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535 Query: 453 LAERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLE 292 + + PNT +++++ K + + +F+ M+ PD ITY+I+L+ Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589 Score = 50.8 bits (120), Expect = 4e-06 Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%) Frame = -2 Query: 627 TYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLA 448 TY+ +++ + G F+ M G+KP+ T+ L+ G++ ++ G++ L Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362 Query: 447 ERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRKEG-M 271 R + P+ + ++ A AK + + VF M+ P+A+TY ++ K G + Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422 Query: 270 TDKMYALQQ 244 D M +Q Sbjct: 423 EDAMLYFEQ 431 Score = 33.9 bits (76), Expect = 0.52 Identities = 22/111 (19%), Positives = 43/111 (38%) Frame = -2 Query: 627 TYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLA 448 TY +++ +A G M + M G+ PD F LI ++ + + + Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397 Query: 447 ERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILL 295 + + PN + +V+ K+ + + F M P I Y+ L+ Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448 Score = 32.3 bits (72), Expect = 1.5 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 4/133 (3%) Frame = -2 Query: 627 TYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMV-KL 451 TY +I AG + +G + D F L+ G + +V + Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148 Query: 450 AERLDVPPNTSFHNSVLAACA---KAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRK 280 L PN +N +L ++++ +E+ + + PD ++Y+ ++ + K Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208 Query: 279 EGMTDKMYALQQE 241 EG +DK Y+ E Sbjct: 209 EGDSDKAYSTYHE 221
>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915| Length = 463 Score = 48.9 bits (115), Expect = 2e-05 Identities = 33/129 (25%), Positives = 55/129 (42%) Frame = -2 Query: 627 TYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLA 448 TYN +++A + G N + F +M+S KP+ T+ LING + M+ Sbjct: 156 TYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTEL 214 Query: 447 ERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRKEGMT 268 ++ PN + ++L K + ++F MK D Y ++ A K G T Sbjct: 215 KKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRT 274 Query: 267 DKMYALQQE 241 + Y QE Sbjct: 275 KEAYEYMQE 283 Score = 45.8 bits (107), Expect = 1e-04 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 1/165 (0%) Frame = -2 Query: 702 KKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTK 523 K R +K +++ RL TYN +I + + +MR G++PD Sbjct: 25 KFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVA 84 Query: 522 TFCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEMERV-FRH 346 T+ LI G + + V+ + + P+ +N+++ K E RV ++ Sbjct: 85 TYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKD 144 Query: 345 MKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQENPSLVSTELV 211 ++ P TY++LL+A K G D L +E S EL+ Sbjct: 145 LQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSRFKPELM 189 Score = 36.2 bits (82), Expect = 0.10 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Frame = -2 Query: 720 LIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEG 541 LI Y + ++ AV MR ATYN++I A ++ F++M G Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWG 113 Query: 540 MKPDTKTF----CCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDL 373 + PD ++ CC + F + ++LA + P +N +L A K + Sbjct: 114 IYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLA---GLNPGPDTYNVLLDALCKCGYI 170 Query: 372 MEMERVFRHMKHMQCEPDAITYSILLEAYRK 280 +F+ M+ + +P+ +TY+IL+ K Sbjct: 171 DNALELFKEMQ-SRFKPELMTYNILINGLCK 200 Score = 32.7 bits (73), Expect = 1.2 Identities = 27/141 (19%), Positives = 57/141 (40%) Frame = -2 Query: 699 KRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKT 520 K Y+ M ++ RR +YN ++ + + G+ ++D ++ GMK D T Sbjct: 275 KEAYEYMQELVRKGRR----HDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYT 330 Query: 519 FCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMK 340 ++NG + + + N N ++ KA ++R R+ + Sbjct: 331 HTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAG---HVDRAMRYFE 387 Query: 339 HMQCEPDAITYSILLEAYRKE 277 M+ + D TY+ ++ K+ Sbjct: 388 SMEVK-DEYTYTSVVHNLCKD 407
>LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)| (Leucine-rich PPR motif-containing protein) Length = 1273 Score = 47.8 bits (112), Expect = 3e-05 Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 4/152 (2%) Frame = -2 Query: 720 LIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEG 541 LI +Y + S ++ +M+ P T A ++ ++ A AGD +N E+ MR G Sbjct: 82 LIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAG 141 Query: 540 MKPDTKTFCCLINGFSNAALFHKVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEME 361 ++P T+ L+N ++ V ++ E+ ++ ++ + +KA L + Sbjct: 142 IEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQ 201 Query: 360 RVFRHMKHMQCE----PDAITYSILLEAYRKE 277 + + K CE PDA+ +LL + E Sbjct: 202 KFW---KKFTCERRYIPDAMNLILLLVTEKLE 230 Score = 30.0 bits (66), Expect = 7.5 Identities = 15/99 (15%), Positives = 40/99 (40%) Frame = -2 Query: 627 TYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLA 448 TY +I ++ GD + M+++ + F L+ G + A ++ + Sbjct: 78 TYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVM 137 Query: 447 ERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQ 331 + P + ++L A A+ D+ +++ ++ + Sbjct: 138 RDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFE 176
>PTCD1_HUMAN (O75127) Pentatricopeptide repeat protein 1| Length = 700 Score = 37.7 bits (86), Expect = 0.036 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Frame = -2 Query: 630 ATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVV-GMVK 454 + Y +I G K + +NQM+ ++P T+ L N + + + +K Sbjct: 174 SNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALK 233 Query: 453 LAERLDVPP---NTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYR 283 L ++L N ++++L AK DL VF+ + H T+S LL Sbjct: 234 LRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCI 293 Query: 282 KEGMTDKMYALQ 247 ++ T YALQ Sbjct: 294 QDKKTGFRYALQ 305
>PTCD1_PONPY (Q5R655) Pentatricopeptide repeat protein 1| Length = 698 Score = 37.7 bits (86), Expect = 0.036 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 4/132 (3%) Frame = -2 Query: 630 ATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVV-GMVK 454 + Y +I G K +NQM+ ++P T+ L N + + + +K Sbjct: 172 SNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALK 231 Query: 453 LAERLDVPP---NTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYR 283 L ++L N ++++L AK DL VF+ + H T+S LL Sbjct: 232 LRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCI 291 Query: 282 KEGMTDKMYALQ 247 ++ T YALQ Sbjct: 292 QDKKTGFRYALQ 303 Score = 29.6 bits (65), Expect = 9.7 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 16/139 (11%) Frame = -2 Query: 666 EYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNA 487 +Y R F +TA ++N+ F + R E KP+ K L G N Sbjct: 93 KYSSRRLFRKSTAQFHNL---------------RFGERRDEQTKPEPK----LWRGQRNT 133 Query: 486 ALFH-----KVVGMVKLAERLDV-----------PPNTSFHNSVLAACAKAEDLMEMERV 355 ++ +++ KL E LD+ P S + +++ C + L + + Sbjct: 134 PYWYFLQCKRLIKEGKLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSL 193 Query: 354 FRHMKHMQCEPDAITYSIL 298 + MK EP TY+ L Sbjct: 194 YNQMKKRDLEPSDATYTAL 212
>AEP3_YEAST (Q12089) ATPase expression protein 3| Length = 606 Score = 35.4 bits (80), Expect = 0.18 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Frame = -2 Query: 672 VMEYMRRLAFPWTTAT--------YNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTF 517 V + +R L P T YN+ I F+E D + + F QM++EG KP+T TF Sbjct: 200 VRKMLRHLLHPTNKTTLPLRSAQVYNDSIYFFSEHFDFASCREIFAQMKAEGTKPNTITF 259 Query: 516 CCLI 505 L+ Sbjct: 260 NLLL 263
>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I| Length = 1261 Score = 31.6 bits (70), Expect = 2.6 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 11/124 (8%) Frame = -2 Query: 624 YNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLAE 445 YN V+ A F +M+ G+ P + T+ +IN +G LAE Sbjct: 929 YNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACR-------IGDESLAE 981 Query: 444 RL--------DVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHM---QCEPDAITYSIL 298 +L + P + +N+++ + + + E+ + + EP + TY +L Sbjct: 982 KLFAEMENQPNYQPRVAPYNTMIQF--EVQTMFNREKALFYYNRLCATDIEPSSHTYKLL 1039 Query: 297 LEAY 286 ++AY Sbjct: 1040 MDAY 1043
>AEP3_CANGA (Q6FKT1) ATPase expression protein 3| Length = 623 Score = 31.6 bits (70), Expect = 2.6 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -2 Query: 624 YNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLI 505 YN+++ +++ D + F QM+ EG KP+T T+ L+ Sbjct: 221 YNDILYFYSKKYDFATCRELFAQMKVEGCKPNTTTYNILL 260 Score = 30.8 bits (68), Expect = 4.4 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -2 Query: 414 HNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQE 241 +N +L +K D +F MK C+P+ TY+ILL K+ K+ +++ E Sbjct: 221 YNDILYFYSKKYDFATCRELFAQMKVEGCKPNTTTYNILLLNLVKKVHMRKIRSIKNE 278
>CD2L6_MOUSE (Q8BWD8) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) Length = 501 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -2 Query: 387 KAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 244 KA+ E ERV ++ C+ TY + +A RK+G +K YAL+Q Sbjct: 6 KAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQ 53
>CD2L6_HUMAN (Q9BWU1) Cell division cycle 2-like protein kinase 6 (EC 2.7.11.22)| (CDC2-related protein kinase 6) (Death-preventing kinase) (Cyclin-dependent kinase 11) Length = 502 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -2 Query: 387 KAEDLMEMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 244 KA+ E ERV ++ C+ TY + +A RK+G +K YAL+Q Sbjct: 6 KAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQ 53
>CDK8_HUMAN (P49336) Cell division protein kinase 8 (EC 2.7.11.22) (EC| 2.7.11.23) (Protein kinase K35) Length = 464 Score = 30.8 bits (68), Expect = 4.4 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = -2 Query: 369 EMERVFRHMKHMQCEPDAITYSILLEAYRKEGMTDKMYALQQ 244 E ERV ++ C+ TY + +A RK+G DK YAL+Q Sbjct: 12 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQ 53
>NANA_PASMU (Q9CKB0) N-acetylneuraminate lyase (EC 4.1.3.3) (N-acetylneuraminic| acid aldolase) (N-acetylneuraminate pyruvate-lyase) (Sialic acid lyase) (Sialate lyase) (Sialic acid aldolase) Length = 293 Score = 30.0 bits (66), Expect = 7.5 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -2 Query: 717 IGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEA 604 +G Y + YD +SAV + + +FP Y+++IEA Sbjct: 91 LGKYATELGYDSLSAVTPFYYKFSFPEIKHYYDSIIEA 128
>AEP3_KLULA (Q6CIF3) ATPase expression protein 3| Length = 593 Score = 30.0 bits (66), Expect = 7.5 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = -2 Query: 654 RLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTF 517 R+A T + +N+VI + + + + QM+SEG+ P+ +T+ Sbjct: 206 RIAPLKTASVFNDVIYYYGNKNNFATCRELYAQMKSEGIAPNVQTY 251 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,257,118 Number of Sequences: 219361 Number of extensions: 2420484 Number of successful extensions: 5694 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5686 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
