| Clone Name | rbags23j02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105L14, full insert sequence Length = 3079 Score = 240 bits (121), Expect = 5e-60 Identities = 363/441 (82%), Gaps = 2/441 (0%) Strand = Plus / Minus Query: 258 atcttgccaccgacgtcggggaagcattcttggtcgggcagcgggacgatcttaccatca 317 ||||||||||| ||||| || |||||||| || || |||| || | | |||||| ||| Sbjct: 2748 atcttgccaccaacgtcaggaaagcattcgtgttctggcaatggaccaaccttaccgtca 2689 Query: 318 ggctctaccttcactgggtatatgaggaggtgcccttgcaacattttcatctcttctgat 377 | ||||||||| ||||||||| |||||||||||||||| ||| || | | | ||||| Sbjct: 2688 gcctctaccttgactgggtatttgaggaggtgcccttgtaacgttataagttgttctgcg 2629 Query: 378 gcgaatctttcccagttatcttcagctatttggttcac-taatcgtacacactccagact 436 | ||| ||| |||||| ||||| ||||||| || || |||| ||||||||||| ||| Sbjct: 2628 gtgaaccttctccagttctcttctgctatttcattgacataatt-tacacactccaaact 2570 Query: 437 agaaggttccttgaagcgctcatcaaccataccaaggtgttcagcccagagggagttcct 496 || || ||||||||| | ||||||||||| ||||| || || ||||||||||| | || Sbjct: 2569 tgatggatccttgaagaggtcatcaaccatcccaagatgctctgcccagagggaagttct 2510 Query: 497 atacccatatacctggccgtgaggatgacccttcttcgaagaccatgcatgatgaggctg 556 |||||| |||||||| ||| ||||||||||| ||| | |||||||| || |||||||| Sbjct: 2509 atacccgtatacctgaccgcgaggatgacccccctttgtagaccatgtgtggtgaggctg 2450 Query: 557 gtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatgtt 616 ||| || ||||| || |||||||||||||| ||||||||||| ||||| || || ||||| Sbjct: 2449 gtatgcgcccatggcaatttcagtatctctggaaccagccaaagatctttggttgatgtt 2390 Query: 617 tgctgaccccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaacatagat 676 ||||||||||| ||| || |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2389 tgctgaccccagaataacatattcatcatctacaatcatcccctttgcatgaacatagat 2330 Query: 677 catgaaccgccgatgttttct 697 ||| || ||||| | |||||| Sbjct: 2329 cataaaacgccggtattttct 2309
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 174 bits (88), Expect = 3e-40 Identities = 169/196 (86%) Strand = Plus / Minus Query: 502 catatacctggccgtgaggatgacccttcttcgaagaccatgcatgatgaggctggtagg 561 |||||||||| ||| ||||||||||| ||| | |||||||| || ||||||||||| | Sbjct: 21095739 catatacctgaccgcgaggatgacccccctttgtagaccatgtgtggtgaggctggtatg 21095680 Query: 562 cacccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatgtttgctg 621 | ||||| || |||||||||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 21095679 cgcccatggcaatttcagtatctctggaaccagccaaagatctttggttgatgtttgctg 21095620 Query: 622 accccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaacatagatcatga 681 |||||| ||| || |||||||| |||||||||||||| |||||||||||||||||||| | Sbjct: 21095619 accccagaataacatattcatcatctacaatcatcccctttgcatgaacatagatcataa 21095560 Query: 682 accgccgatgttttct 697 | ||||| | |||||| Sbjct: 21095559 aacgccggtattttct 21095544 Score = 85.7 bits (43), Expect = 2e-13 Identities = 204/255 (80%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 258 atcttgccaccgacgtcggggaagcattcttggtcgggcagcgggacgatcttaccatca 317 ||||||||||| ||||| || |||||||| || || |||| || | | |||||| ||| Sbjct: 21096197 atcttgccaccaacgtcaggaaagcattcgtgttctggcaatggaccaaccttaccgtca 21096138 Query: 318 ggctctaccttcactgggtatatgaggaggtgcccttgcaacattttcatctcttctgat 377 | ||||||||| ||||||||| |||||||||||||||| ||| || | | | ||||| Sbjct: 21096137 gcctctaccttgactgggtatttgaggaggtgcccttgtaacgttataagttgttctgcg 21096078 Query: 378 gcgaatctttcccagttatcttcagctatttggttcac-taatcgtacacactccagact 436 | ||| ||| |||||| ||||| ||||||| || || |||| ||||||||||| ||| Sbjct: 21096077 gtgaaccttctccagttctcttctgctatttcattgacataat-ttacacactccaaact 21096019 Query: 437 agaaggttccttgaagcgctcatcaaccataccaaggtgttcagcccagagggagttcct 496 || || ||||||||| | ||||||||||| ||||| || || ||||||||||| | || Sbjct: 21096018 tgatggatccttgaagaggtcatcaaccatcccaagatgctctgcccagagggaagttct 21095959 Query: 497 atacccatatacctg 511 |||||| |||||||| Sbjct: 21095958 atacccgtatacctg 21095944
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 174 bits (88), Expect = 3e-40 Identities = 169/196 (86%) Strand = Plus / Minus Query: 502 catatacctggccgtgaggatgacccttcttcgaagaccatgcatgatgaggctggtagg 561 |||||||||| ||| ||||||||||| ||| | |||||||| || ||||||||||| | Sbjct: 117039 catatacctgaccgcgaggatgacccccctttgtagaccatgtgtggtgaggctggtatg 116980 Query: 562 cacccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatgtttgctg 621 | ||||| || |||||||||||||| ||||||||||| ||||| || || |||||||||| Sbjct: 116979 cgcccatggcaatttcagtatctctggaaccagccaaagatctttggttgatgtttgctg 116920 Query: 622 accccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaacatagatcatga 681 |||||| ||| || |||||||| |||||||||||||| |||||||||||||||||||| | Sbjct: 116919 accccagaataacatattcatcatctacaatcatcccctttgcatgaacatagatcataa 116860 Query: 682 accgccgatgttttct 697 | ||||| | |||||| Sbjct: 116859 aacgccggtattttct 116844 Score = 85.7 bits (43), Expect = 2e-13 Identities = 204/255 (80%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 258 atcttgccaccgacgtcggggaagcattcttggtcgggcagcgggacgatcttaccatca 317 ||||||||||| ||||| || |||||||| || || |||| || | | |||||| ||| Sbjct: 117497 atcttgccaccaacgtcaggaaagcattcgtgttctggcaatggaccaaccttaccgtca 117438 Query: 318 ggctctaccttcactgggtatatgaggaggtgcccttgcaacattttcatctcttctgat 377 | ||||||||| ||||||||| |||||||||||||||| ||| || | | | ||||| Sbjct: 117437 gcctctaccttgactgggtatttgaggaggtgcccttgtaacgttataagttgttctgcg 117378 Query: 378 gcgaatctttcccagttatcttcagctatttggttcac-taatcgtacacactccagact 436 | ||| ||| |||||| ||||| ||||||| || || |||| ||||||||||| ||| Sbjct: 117377 gtgaaccttctccagttctcttctgctatttcattgacataat-ttacacactccaaact 117319 Query: 437 agaaggttccttgaagcgctcatcaaccataccaaggtgttcagcccagagggagttcct 496 || || ||||||||| | ||||||||||| ||||| || || ||||||||||| | || Sbjct: 117318 tgatggatccttgaagaggtcatcaaccatcccaagatgctctgcccagagggaagttct 117259 Query: 497 atacccatatacctg 511 |||||| |||||||| Sbjct: 117258 atacccgtatacctg 117244
>ref|XM_450186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2532 Score = 85.7 bits (43), Expect = 2e-13 Identities = 204/255 (80%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 258 atcttgccaccgacgtcggggaagcattcttggtcgggcagcgggacgatcttaccatca 317 ||||||||||| ||||| || |||||||| || || |||| || | | |||||| ||| Sbjct: 2489 atcttgccaccaacgtcaggaaagcattcgtgttctggcaatggaccaaccttaccgtca 2430 Query: 318 ggctctaccttcactgggtatatgaggaggtgcccttgcaacattttcatctcttctgat 377 | ||||||||| ||||||||| |||||||||||||||| ||| || | | | ||||| Sbjct: 2429 gcctctaccttgactgggtatttgaggaggtgcccttgtaacgttataagttgttctgcg 2370 Query: 378 gcgaatctttcccagttatcttcagctatttggttcac-taatcgtacacactccagact 436 | ||| ||| |||||| ||||| ||||||| || || |||| ||||||||||| ||| Sbjct: 2369 gtgaaccttctccagttctcttctgctatttcattgacataat-ttacacactccaaact 2311 Query: 437 agaaggttccttgaagcgctcatcaaccataccaaggtgttcagcccagagggagttcct 496 || || ||||||||| | ||||||||||| ||||| || || ||||||||||| | || Sbjct: 2310 tgatggatccttgaagaggtcatcaaccatcccaagatgctctgcccagagggaagttct 2251 Query: 497 atacccatatacctg 511 |||||| |||||||| Sbjct: 2250 atacccgtatacctg 2236 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Minus Query: 503 atatacctggccgtgaggatgacccttcttcgaagaccatgcatgatgaggctggtaggc 562 ||||| ||| ||| ||||||||||| ||| | |||||||| || ||||||||||| || Sbjct: 2165 atatagctgaccgcgaggatgacccccctttgtagaccatgtgtggtgaggctggtatgc 2106 Query: 563 acccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatgtttgc 619 ||||| || |||||||||||||| ||||||||||| ||||| || || |||||||| Sbjct: 2105 gcccatggcaatttcagtatctctggaaccagccaaagatctttggttgatgtttgc 2049
>dbj|AK058661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G04, full insert sequence Length = 451 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 258 atcttgccaccgacgtcggggaagcattcttggtcgggcagcgggacgatcttaccatca 317 ||||||||||| ||||| || |||||||| || || |||| || | | |||||| ||| Sbjct: 119 atcttgccaccaacgtcaggaaagcattcgtgttctggcaatggaccaaccttaccgtca 60 Query: 318 ggctctaccttcactgggtatatgaggaggtgcccttg 355 | ||||||||| ||||||||| |||||||||||||||| Sbjct: 59 gcctctaccttgactgggtatttgaggaggtgcccttg 22
>gb|AY013255.1| Lycopersicon esculentum phospholipase PLDb1 (PLDb1) mRNA, complete cds Length = 3185 Score = 65.9 bits (33), Expect = 2e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaa 598 ||||| |||||||||||| || || |||||||| |||||||||||||| | || ||| Sbjct: 2604 ccatgtatgatgaggctgatacgcgcccattgcaatttcagtatctctggtgccttccag 2545 Query: 599 ggatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccc 658 || | ||||| |||||||| || |||| ||||| || ||||||||||| ||||| || Sbjct: 2544 agaacgttgattgatgtttgcagatcccattatgacatactcatcgtctactatcattcc 2485 Query: 659 ttttgcatgaacatagatcat 679 ||||| || ||||||||||| Sbjct: 2484 ttttgagtggacatagatcat 2464
>emb|Z84822.1|NTZ84822 Nicotiana tabacum mRNA for phospholipase D Length = 2723 Score = 60.0 bits (30), Expect = 1e-05 Identities = 111/138 (80%) Strand = Plus / Minus Query: 545 atgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatct 604 ||||||||||||||| || ||||| || ||||||| |||||| | |||| ||| ||||| Sbjct: 2161 atgatgaggctggtaagctcccatggctatttcagaatctctggcaccatccatcgatct 2102 Query: 605 ctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatcccttttgc 664 ||| |||||||| || || || | |||| ||| ||||| || ||||||||| || | Sbjct: 2101 ctggtttatgttggccgatccaactatgatgtactcatcatcaacaatcatcatcttgga 2042 Query: 665 atgaacatagatcatgaa 682 ||| |||||||||||||| Sbjct: 2041 atggacatagatcatgaa 2024
>emb|CR962130.2| Medicago truncatula chromosome 5 clone mte1-63h20, COMPLETE SEQUENCE Length = 115239 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 563 acccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatgtttgctga 622 |||||| || || ||||||||| | | |||||||| ||||| || |||||||| || || Sbjct: 13009 acccatagctatctcagtatctttagtaccagccatagatctttggtttatgttggcaga 12950 Query: 623 ccccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaacatagatcat 679 ||||| || || |||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 12949 tcccaatataacatattcatcatccacgatcatccccttggcatgcacatagatcat 12893
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 561 gcacccattgcgatttcagtatctctcgaaccagccaaggatct 604 ||||||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 49074 gcacccattgctatctcagtatctcttgaaccagccaaagatct 49117
>ref|XM_477315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3011 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 549 tgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctga 608 |||||||||||||| ||||| ||||| || || || || || ||| ||| ||| |||||| Sbjct: 2597 tgaggctggtaggcgcccatagcgatctcggtgtcccttgagccatccatggacctctga 2538 Query: 609 tttatgtttgctga 622 |||||||| ||||| Sbjct: 2537 tttatgttggctga 2524
>gb|AF414566.1|AF414565S2 Oryza sativa phospholipase D nu-2 (OsPLDnu2) gene, partial cds Length = 3000 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 549 tgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctga 608 |||||||||||||| ||||| ||||| || || || || || ||| ||| ||| |||||| Sbjct: 1566 tgaggctggtaggcgcccatagcgatctcggtgtcccttgagccatccatggacctctga 1507 Query: 609 tttatgtttgctga 622 |||||||| ||||| Sbjct: 1506 tttatgttggctga 1493
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Plus Query: 549 tgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctga 608 |||||||||||||| ||||| ||||| || || || || || ||| ||| ||| |||||| Sbjct: 9139138 tgaggctggtaggcgcccatagcgatctcggtgtcccttgagccatccatggacctctga 9139197 Query: 609 tttatgtttgctga 622 |||||||| ||||| Sbjct: 9139198 tttatgttggctga 9139211
>dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0046D03 Length = 150554 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Plus Query: 549 tgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctga 608 |||||||||||||| ||||| ||||| || || || || || ||| ||| ||| |||||| Sbjct: 22011 tgaggctggtaggcgcccatagcgatctcggtgtcccttgagccatccatggacctctga 22070 Query: 609 tttatgtttgctga 622 |||||||| ||||| Sbjct: 22071 tttatgttggctga 22084
>dbj|AK070203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042B21, full insert sequence Length = 3279 Score = 52.0 bits (26), Expect = 0.003 Identities = 62/74 (83%) Strand = Plus / Minus Query: 549 tgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctga 608 |||||||||||||| ||||| ||||| || || || || || ||| ||| ||| |||||| Sbjct: 2597 tgaggctggtaggcgcccatagcgatctcggtgtcccttgagccatccatggacctctga 2538 Query: 609 tttatgtttgctga 622 |||||||| ||||| Sbjct: 2537 tttatgttggctga 2524
>gb|AY138861.1| Nicotiana tabacum phospholipase D beta 1 isoform mRNA, partial cds Length = 1740 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctct 586 ||||| |||||| ||||| || | ||||||||| |||||||||||||| Sbjct: 1458 ccatgtatgatggggctgatatgaacccattgcaatttcagtatctct 1411
>gb|AY013252.1| Lycopersicon esculentum phospholipase PLDa1 (PLDa1) mRNA, complete cds Length = 2697 Score = 48.1 bits (24), Expect = 0.039 Identities = 60/72 (83%) Strand = Plus / Minus Query: 545 atgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatct 604 ||||| |||||||||||| ||||| || ||||| | |||||| | |||| ||| ||||| Sbjct: 2166 atgataaggctggtaggctcccatggctatttctgaatctctagcaccatccatagatct 2107 Query: 605 ctgatttatgtt 616 ||| |||||||| Sbjct: 2106 ctggtttatgtt 2095
>gb|AF201661.1|AF201661 Lycopersicon esculentum phospholipase D alpha mRNA, partial cds Length = 2427 Score = 48.1 bits (24), Expect = 0.039 Identities = 60/72 (83%) Strand = Plus / Minus Query: 545 atgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatct 604 ||||| |||||||||||| ||||| || ||||| | |||||| | |||| ||| ||||| Sbjct: 2100 atgataaggctggtaggctcccatggctatttctgaatctctagcaccatccatagatct 2041 Query: 605 ctgatttatgtt 616 ||| |||||||| Sbjct: 2040 ctggtttatgtt 2029
>gb|AF154425.1| Lycopersicon esculentum phospholipase D (TPLD) mRNA, complete cds Length = 2848 Score = 48.1 bits (24), Expect = 0.039 Identities = 102/128 (79%) Strand = Plus / Minus Query: 555 tggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctgatttatg 614 |||||||| |||||||| ||||| | |||||| | |||| ||| || || ||||| ||| Sbjct: 2229 tggtaggctcccattgctatttctgaatctcttgcaccatccattgacctttgattgatg 2170 Query: 615 tttgctgaccccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaacatag 674 || ||||| || | || | ||||||||| || || |||||| |||||||||||| || Sbjct: 2169 ttagctgatccaatgataatgtattcatcatccactatcatcatttttgcatgaacgtaa 2110 Query: 675 atcatgaa 682 |||||||| Sbjct: 2109 atcatgaa 2102
>gb|AF544228.1| Gossypium hirsutum phospholipase D delta isoform (pldd) mRNA, complete cds Length = 3048 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaaccg 685 ||||| ||||| |||||||| |||||||| || || ||||||||||| Sbjct: 2371 tcatcatctactatcatcccctttgcatgcacgtaaatcatgaaccg 2325
>gb|AY138251.1| Gossypium hirsutum phospholipase D delta isoform 1b mRNA, complete cds Length = 3028 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaaccg 685 ||||| ||||| |||||||| |||||||| || || ||||||||||| Sbjct: 2371 tcatcatctactatcatcccctttgcatgcacgtaaatcatgaaccg 2325
>dbj|AK073012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150C03, full insert sequence Length = 3466 Score = 46.1 bits (23), Expect = 0.16 Identities = 104/131 (79%) Strand = Plus / Minus Query: 552 ggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatctctgattt 611 ||||| || |||||||| || || ||||||||||| ||| ||| ||| |||||||| Sbjct: 3110 ggctgatacgcacccatcgcaatctcagtatctctgataccttccatggacctctgattg 3051 Query: 612 atgtttgctgaccccaaaatgacgtattcatcgtctacaatcatcccttttgcatgaaca 671 || || ||||| |||| || || |||||||| || |||||||| ||||||| ||| ||| Sbjct: 3050 atattagctgatcccattatcacatattcatcatccacaatcatgccttttgaatgtaca 2991 Query: 672 tagatcatgaa 682 || | |||||| Sbjct: 2990 tataccatgaa 2980
>ref|NM_179170.1| Arabidopsis thaliana ATPLDDELTA; phospholipase D AT4G35790 (ATPLDDELTA) transcript variant AT4G35790.2 mRNA, complete cds Length = 3109 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2542 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2497 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2442 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2399
>ref|NM_179171.1| Arabidopsis thaliana ATPLDDELTA; phospholipase D AT4G35790 (ATPLDDELTA) transcript variant AT4G35790.3 mRNA, complete cds Length = 3248 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2681 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2636 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2581 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2538
>ref|NM_119745.2| Arabidopsis thaliana ATPLDDELTA; phospholipase D AT4G35790 (ATPLDDELTA) transcript variant AT4G35790.1 mRNA, complete cds Length = 3142 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2575 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2530 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2475 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2432
>gb|AE009123.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 149 of 256 of the complete sequence Length = 11363 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 ggtcgggcagcgggacgatctt 310 |||||||||||||||||||||| Sbjct: 7770 ggtcgggcagcgggacgatctt 7749
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 28136 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 28181 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 28236 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 28279
>emb|AJ843129.1| Plantago major partial mRNA for phospholipase D (pld1 gene) Length = 926 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 660 tttgcatgaacatagatcatgaaccgccga 689 |||||||| |||||||||||||| |||||| Sbjct: 309 tttgcatggacatagatcatgaagcgccga 280
>gb|AY113045.1| Arabidopsis thaliana AT4g35790/F4B14_60 mRNA, complete cds Length = 2547 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2220 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2175 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2120 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2077
>gb|AY079017.1| Arabidopsis thaliana AT4g35790/F4B14_60 mRNA, complete sequence Length = 2962 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2477 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2432 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2377 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2334
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 ggtcgggcagcgggacgatctt 310 |||||||||||||||||||||| Sbjct: 1653727 ggtcgggcagcgggacgatctt 1653706
>gb|AF322228.1|AF322228 Arabidopsis thaliana phospholipase D delta mRNA, complete cds Length = 2787 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2262 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2217 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2162 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2119
>gb|AF306345.1|AF306345 Arabidopsis thaliana phospholipase D mRNA, complete cds Length = 2770 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2253 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2208 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2153 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2110
>gb|AF424632.1|AF424632 Arabidopsis thaliana AT4g35790/F4B14_60 mRNA, complete cds Length = 2926 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2385 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2340 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2285 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2242
>gb|AF274239.1|AF274239 Arabidopsis thaliana phospholipase D-like protein p98 mRNA, partial cds Length = 2084 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 1646 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 1601 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 1546 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 1503
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Plus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 19940 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 19985 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 20040 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 20083
>dbj|AB031047.1| Arabidopsis thaliana AtPLDdelta mRNA for phospholipase D, complete cds Length = 2875 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatct 584 ||||| ||||| ||| ||||| || ||||| ||||||||||||||| Sbjct: 2389 ccatgtatgattaggttggtatgcgcccatggcgatttcagtatct 2344 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 ||||| ||||| |||||||||||||| || || || |||||||| Sbjct: 2289 tcatcatctactatcatcccttttgcgtgcacgtaaatcatgaa 2246
>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 agacaagacattcagagaggt 157 ||||||||||||||||||||| Sbjct: 119980 agacaagacattcagagaggt 119960
>ref|NM_116245.1| Arabidopsis thaliana PLDBETA2 AT4G00240 (PLDBETA2) mRNA, complete cds Length = 2784 Score = 42.1 bits (21), Expect = 2.4 Identities = 111/141 (78%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaa 598 ||||| ||| ||||||||||| || |||||||| || || |||||||| | || ||| Sbjct: 2460 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctcttgtcccctccat 2401 Query: 599 ggatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccc 658 ||||| || ||||||||||| || || | | || || ||||| || |||| |||||| Sbjct: 2400 tgatctttggtttatgtttgcagatccaattaccacatactcatcatcaacaaccatccc 2341 Query: 659 ttttgcatgaacatagatcat 679 ||||| ||||||||| ||||| Sbjct: 2340 ttttgaatgaacatatatcat 2320
>gb|AF271358.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD5) gene, complete cds Length = 6300 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 630 atgacgtattcatcgtctacaatcatcccttttgcatgaacatagatcatgaa 682 |||||||| || ||||| || | ||||||||||| || |||||||||||||| Sbjct: 5152 atgacgtactcgtcgtcaaccaccatcccttttgagtgcacatagatcatgaa 5100 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cttgccaccgacgtcggggaagca 283 |||||| ||||||||||||||||| Sbjct: 5727 cttgccgccgacgtcggggaagca 5704
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence Length = 93126 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 gcatgaacatagatcatgaaccgcc 687 |||||||||||||||||||| |||| Sbjct: 63609 gcatgaacatagatcatgaaacgcc 63585
>emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 1 Length = 197119 Score = 42.1 bits (21), Expect = 2.4 Identities = 111/141 (78%) Strand = Plus / Plus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaa 598 ||||| ||| ||||||||||| || |||||||| || || |||||||| | || ||| Sbjct: 105782 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctcttgtcccctccat 105841 Query: 599 ggatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccc 658 ||||| || ||||||||||| || || | | || || ||||| || |||| |||||| Sbjct: 105842 tgatctttggtttatgtttgcagatccaattaccacatactcatcatcaacaaccatccc 105901 Query: 659 ttttgcatgaacatagatcat 679 ||||| ||||||||| ||||| Sbjct: 105902 ttttgaatgaacatatatcat 105922
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete sequence Length = 113539 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 gcatgaacatagatcatgaaccgcc 687 |||||||||||||||||||| |||| Sbjct: 96896 gcatgaacatagatcatgaaacgcc 96872
>gb|AF195115.1|F5I10 Arabidopsis thaliana BAC F5I10 Length = 111906 Score = 42.1 bits (21), Expect = 2.4 Identities = 111/141 (78%) Strand = Plus / Plus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaa 598 ||||| ||| ||||||||||| || |||||||| || || |||||||| | || ||| Sbjct: 6301 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctcttgtcccctccat 6360 Query: 599 ggatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccc 658 ||||| || ||||||||||| || || | | || || ||||| || |||| |||||| Sbjct: 6361 tgatctttggtttatgtttgcagatccaattaccacatactcatcatcaacaaccatccc 6420 Query: 659 ttttgcatgaacatagatcat 679 ||||| ||||||||| ||||| Sbjct: 6421 ttttgaatgaacatatatcat 6441
>gb|AC004708.1|AC004708 CIC5B11.1 check: 4870 from: 1 to: 167234, complete sequence Length = 167234 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 639 tcatcgtctacaatcatcccttttgcatgaacatagatcat 679 ||||| || |||| ||||||||||| ||||||||| ||||| Sbjct: 131293 tcatcatcaacaaccatcccttttgaatgaacatatatcat 131333
>gb|AF013293.1|IG005I10 Arabidopsis thaliana BAC IG005I10 Length = 111906 Score = 42.1 bits (21), Expect = 2.4 Identities = 111/141 (78%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaa 598 ||||| ||| ||||||||||| || |||||||| || || |||||||| | || ||| Sbjct: 105606 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctcttgtcccctccat 105547 Query: 599 ggatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccc 658 ||||| || ||||||||||| || || | | || || ||||| || |||| |||||| Sbjct: 105546 tgatctttggtttatgtttgcagatccaattaccacatactcatcatcaacaaccatccc 105487 Query: 659 ttttgcatgaacatagatcat 679 ||||| ||||||||| ||||| Sbjct: 105486 ttttgaatgaacatatatcat 105466
>ref|NM_100097.2| Arabidopsis thaliana LOL3 (LSD ONE LIKE 3); caspase/ cysteine-type endopeptidase AT1G02170 (LOL3) mRNA, complete cds Length = 1610 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatccc 658 |||||||||||||||||||| Sbjct: 593 tcatcgtctacaatcatccc 574
>ref|NM_117255.2| Arabidopsis thaliana PLDGAMMA1; phospholipase D AT4G11850 (PLDGAMMA1) mRNA, complete cds Length = 3069 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 2491 cccatggcgatttcagtatctctagttccttccaaggatctctg 2448
>ref|NM_129765.2| Arabidopsis thaliana PLDBETA1 (PHOSPHOLIPASE D BETA 1); phospholipase D AT2G42010 (PLDBETA1) mRNA, complete cds Length = 3638 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctct 586 ||||| ||| ||||||||||| || |||||||| || || |||||||| Sbjct: 3109 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctct 3062
>gb|AC101763.8| Mus musculus chromosome 1, clone RP24-468E2, complete sequence Length = 143657 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 tgtttgctgaccccaaaatg 632 |||||||||||||||||||| Sbjct: 58663 tgtttgctgaccccaaaatg 58682
>gb|BC101324.2| Homo sapiens similar to CTAGE6, mRNA (cDNA clone IMAGE:40024903), partial cds Length = 1638 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 229 caggttatcatcatccgttg 210
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 ctcgaaccagccaaggatct 604 |||||||||||||||||||| Sbjct: 1440427 ctcgaaccagccaaggatct 1440446
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cttgccaccgacgtcggggaagca 283 |||||| ||||||||||||||||| Sbjct: 47309 cttgccgccgacgtcggggaagca 47332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cttgccaccgacgtcggggaagca 283 |||||| ||||||||||||||||| Sbjct: 35046408 cttgccgccgacgtcggggaagca 35046431
>gb|AC106862.3| Homo sapiens BAC clone RP11-61L23 from 7, complete sequence Length = 169723 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 55976 caggttatcatcatccgttg 55995
>gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, complete sequence Length = 200123 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 122015 caggttatcatcatccgttg 121996
>gb|AF338232.1| Homo sapiens CTAGE-4 protein mRNA, complete cds Length = 1967 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 257 caggttatcatcatccgttg 238
>gb|AC004889.1| Homo sapiens PAC clone RP4-798C17 from 7, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 119987 caggttatcatcatccgttg 120006 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 35997 caggttatcatcatccgttg 35978
>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence Length = 97390 Score = 40.1 bits (20), Expect = 9.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 600 gatctctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatccct 659 ||||||||||| || |||||||| || | || || ||| |||| || || ||||| ||| Sbjct: 25306 gatctctgattaatatttgctgatccaattattacatatccatcatcaactatcattcct 25247 Query: 660 tttgcatgaacatagatcat 679 || ||||||||||| ||||| Sbjct: 25246 ttagcatgaacataaatcat 25227
>emb|AL645507.7| Human DNA sequence from clone RP11-476C24 on chromosome 1 Contains part of the gene for a novel protein, complete sequence Length = 102743 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 caagacattcagagaggttt 159 |||||||||||||||||||| Sbjct: 24165 caagacattcagagaggttt 24184
>gb|AY322525.1| Arabidopsis thaliana metacaspase 1 (AMC1) mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatccc 658 |||||||||||||||||||| Sbjct: 593 tcatcgtctacaatcatccc 574
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 123 atcatccgttggcaagacaagacattca 150 ||||||||||||||| | |||||||||| Sbjct: 4925116 atcatccgttggcaaaagaagacattca 4925089
>gb|AC158790.5| Mus musculus chromosome 1, clone RP23-223M9, complete sequence Length = 178205 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acattcagagaggttttaca 163 |||||||||||||||||||| Sbjct: 131622 acattcagagaggttttaca 131641
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 180765 cccatggcgatttcagtatctctagttccttccaaggatctctg 180808
>emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, BAC clone T26M18 (ESSA project) Length = 90824 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 43465 cccatggcgatttcagtatctctagttccttccaaggatctctg 43508
>emb|AL662839.15| Mouse DNA sequence from clone RP23-472O5 on chromosome 11 Contains the 5' end of the Glra1 gene for glycine receptor alpha 1 subunit and a CpG island, complete sequence Length = 130292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 acattttcatctcttctgat 377 |||||||||||||||||||| Sbjct: 105470 acattttcatctcttctgat 105451
>gb|BC043153.2| Homo sapiens CTAGE family, member 6, mRNA (cDNA clone MGC:41943 IMAGE:5296763), complete cds Length = 2620 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 916 caggttatcatcatccgttg 897
>gb|AY758359.1| Fragaria x ananassa phospholipase D alpha mRNA, complete cds Length = 2874 Score = 40.1 bits (20), Expect = 9.6 Identities = 113/144 (78%) Strand = Plus / Minus Query: 545 atgatgaggctggtaggcacccattgcgatttcagtatctctcgaaccagccaaggatct 604 |||||| || |||||||| ||||| || ||||||| || || | |||| ||| ||||| Sbjct: 2287 atgatgtggttggtaggctcccatggctatttcagagtccctggcaccatccattgatct 2228 Query: 605 ctgatttatgtttgctgaccccaaaatgacgtattcatcgtctacaatcatcccttttgc 664 |||||| ||||| || || || | |||| ||||||||| || || |||||| ||| | Sbjct: 2227 ctgattgatgttggcagatccaatgatgatgtattcatcatcgactatcatcattttggt 2168 Query: 665 atgaacatagatcatgaaccgccg 688 |||||||| |||||||| ||||| Sbjct: 2167 gtgaacataaatcatgaagcgccg 2144
>gb|AC103619.12| Mus musculus chromosome 1, clone RP24-217I23, complete sequence Length = 152116 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acattcagagaggttttaca 163 |||||||||||||||||||| Sbjct: 3943 acattcagagaggttttaca 3962
>gb|AY099569.1| Arabidopsis thaliana putative phospholipase D-gamma (At4g11850) mRNA, complete cds Length = 2894 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 2354 cccatggcgatttcagtatctctagttccttccaaggatctctg 2311
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 caaaatgacgtattcatcgt 645 |||||||||||||||||||| Sbjct: 1369233 caaaatgacgtattcatcgt 1369252
>gb|U90439.3| Arabidopsis thaliana chromosome 2 BAC T6D20 genomic sequence, complete sequence Length = 95824 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctct 586 ||||| ||| ||||||||||| || |||||||| || || |||||||| Sbjct: 29874 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctct 29827
>ref|NM_001008747.1| Homo sapiens similar to CTAGE6 (LOC441294), mRNA Length = 2355 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 900 caggttatcatcatccgttg 881
>ref|XM_935638.1| PREDICTED: Homo sapiens similar to CTAGE family, member 5 (LOC641899), mRNA Length = 4583 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 2072 caggttatcatcatccgttg 2053
>ref|XM_499498.2| PREDICTED: Homo sapiens CTAGE family, member 6 (CTAGE6), mRNA Length = 3172 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 1487 caggttatcatcatccgttg 1468
>ref|XM_936769.1| PREDICTED: Homo sapiens similar to CTAGE family, member 5 (LOC647707), mRNA Length = 4583 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 2072 caggttatcatcatccgttg 2053
>ref|XM_496933.2| PREDICTED: Homo sapiens similar to CTAGE family, member 5 (LOC441296), mRNA Length = 4583 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 2072 caggttatcatcatccgttg 2053
>ref|XM_498461.2| PREDICTED: Homo sapiens CTAGE family, member 6 (CTAGE6), mRNA Length = 3172 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 1487 caggttatcatcatccgttg 1468
>ref|XM_928907.1| PREDICTED: Homo sapiens similar to CTAGE family, member 5 (LOC643854), mRNA Length = 4583 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 2072 caggttatcatcatccgttg 2053
>gb|AC148828.2| Pan troglodytes BAC clone CH251-136M2 from chromosome 7, complete sequence Length = 162801 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 114015 caggttatcatcatccgttg 114034
>gb|U84568.2|ATU84568 Arabidopsis thaliana phospholipase D (PLDbeta) mRNA, complete cds Length = 3305 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctct 586 ||||| ||| ||||||||||| || |||||||| || || |||||||| Sbjct: 2756 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctct 2709
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 666 tgaacatagatcatgaaccg 685 |||||||||||||||||||| Sbjct: 23547331 tgaacatagatcatgaaccg 23547312
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 cttgccaccgacgtcggggaagca 283 |||||| ||||||||||||||||| Sbjct: 35136480 cttgccgccgacgtcggggaagca 35136503
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 tttcagtatctctcgaacca 593 |||||||||||||||||||| Sbjct: 39083171 tttcagtatctctcgaacca 39083190
>emb|BX821609.1|CNS0A94A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 638 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 539 ccatgcatgatgaggctggtaggcacccattgcgatttcagtatctct 586 ||||| ||| ||||||||||| || |||||||| || || |||||||| Sbjct: 137 ccatgtatgttgaggctggtaagctcccattgcaatctctgtatctct 90
>gb|AF289199.1|AF289199 Mus musculus junctin and aspartyl beta-hydroxylase (Asph) genes, partial cds Length = 12427 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 actctgaagagaagtcagta 206 |||||||||||||||||||| Sbjct: 5391 actctgaagagaagtcagta 5372
>gb|AC064879.3|AC064879 Arabidopsis thaliana chromosome I BAC T6A9 genomic sequence, complete sequence Length = 109180 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatccc 658 |||||||||||||||||||| Sbjct: 7692 tcatcgtctacaatcatccc 7673
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 tttcagtatctctcgaacca 593 |||||||||||||||||||| Sbjct: 101151 tttcagtatctctcgaacca 101170
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 666 tgaacatagatcatgaaccg 685 |||||||||||||||||||| Sbjct: 28295 tgaacatagatcatgaaccg 28276
>emb|BX276091.6| Zebrafish DNA sequence from clone CH211-267P9 in linkage group 5, complete sequence Length = 134612 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gttccttgaagcgctcatca 461 |||||||||||||||||||| Sbjct: 68179 gttccttgaagcgctcatca 68198
>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence Length = 166286 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gttccttgaagcgctcatca 461 |||||||||||||||||||| Sbjct: 15198 gttccttgaagcgctcatca 15179
>dbj|AK072121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122J23, full insert sequence Length = 3145 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 666 tgaacatagatcatgaaccg 685 |||||||||||||||||||| Sbjct: 2141 tgaacatagatcatgaaccg 2122
>dbj|AK069703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027C22, full insert sequence Length = 2733 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 cttgccaccgacgtcggggaagca 283 |||||| ||||||||||||||||| Sbjct: 2634 cttgccgccgacgtcggggaagca 2611
>gb|BT002140.1| Arabidopsis thaliana putative phospholipase D-gamma (At4g11850) mRNA, complete cds Length = 2678 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 2228 cccatggcgatttcagtatctctagttccttccaaggatctctg 2185
>dbj|AB001919.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5169 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 666 tgaacatagatcatgaaccg 685 |||||||||||||||||||| Sbjct: 4073 tgaacatagatcatgaaccg 4054
>emb|AL135904.11| Human DNA sequence from clone RP5-1005H11 on chromosome 6 Contains part of the gene for a 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) protein, the gene for WUGSC:H_DJ0988G15.3 protein, part of the PDNP3 (phosphodiesterase I/nucleotide pyrophosphatase 3) gene, ESTs, STSs and GSSs, complete sequence Length = 59130 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 31234 caggttatcatcatccgttg 31253
>gb|AY219826.1| Arabidopsis thaliana metacaspase 1 (At1g02170) mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatccc 658 |||||||||||||||||||| Sbjct: 593 tcatcgtctacaatcatccc 574
>gb|AF027408.1|AF027408 Arabidopsis thaliana phospholipase D-gamma mRNA, complete cds Length = 3234 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 564 cccattgcgatttcagtatctctcgaaccagccaaggatctctg 607 ||||| ||||||||||||||||| | || ||||||||||||| Sbjct: 2533 cccatggcgatttcagtatctctagttccttccaaggatctctg 2490
>emb|AL773548.10| Mouse DNA sequence from clone RP23-70D2 on chromosome 4, complete sequence Length = 198991 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 actctgaagagaagtcagta 206 |||||||||||||||||||| Sbjct: 29581 actctgaagagaagtcagta 29600
>gb|AC005587.1| Homo sapiens PAC clone RP5-988G15 from 6, complete sequence Length = 140915 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caggttatcatcatccgttg 133 |||||||||||||||||||| Sbjct: 92861 caggttatcatcatccgttg 92842
>gb|U89959.1| Arabidopsis thaliana BAC T7I23, complete sequence Length = 106973 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 tcatcgtctacaatcatccc 658 |||||||||||||||||||| Sbjct: 63064 tcatcgtctacaatcatccc 63045 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,685,236 Number of Sequences: 3902068 Number of extensions: 4685236 Number of successful extensions: 91111 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 90761 Number of HSP's gapped (non-prelim): 352 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)