ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23i22 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 277 bits (709), Expect = 2e-74 Identities = 140/146 (95%), Positives = 141/146 (96%) Frame = -3 Query: 628 APEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTV 449 APEILAVIGKVPHLSEFLNSLYNCQYKSFF AFSGL EQIKLDRYLQPHFRYYMREVRTV Sbjct: 243 APEILAVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTV 302 Query: 448 VYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDER 269 VYSQFLESYKSVTMEAMASAFGVTVDFID ELSRFIAAGKLHCKIDKVA VLETNRPD R Sbjct: 303 VYSQFLESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDAR 362 Query: 268 NAFYQSTIKQGDFLLNRIQKLSRVID 191 NAFYQ+TIKQGDFLLNRIQKLSRVID Sbjct: 363 NAFYQATIKQGDFLLNRIQKLSRVID 388
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 254 bits (650), Expect = 1e-67 Identities = 125/146 (85%), Positives = 135/146 (92%) Frame = -3 Query: 628 APEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTV 449 APEIL V+GK+P LSEFLNSLY CQYK+FF AF+G+ QIK DRYL PHFR+YMREVRTV Sbjct: 241 APEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTV 300 Query: 448 VYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDER 269 VYSQFLESYKSVT+EAMA AFGV+VDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPD + Sbjct: 301 VYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAK 360 Query: 268 NAFYQSTIKQGDFLLNRIQKLSRVID 191 NA YQ+TIKQGDFLLNRIQKLSRVID Sbjct: 361 NALYQATIKQGDFLLNRIQKLSRVID 386
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 187 bits (476), Expect = 2e-47 Identities = 86/144 (59%), Positives = 120/144 (83%) Frame = -3 Query: 622 EILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVY 443 EI V+ +P + +FL SLYNCQY++F+V +G+ +Q++LD + PH+RYY+RE+R + Y Sbjct: 245 EIQEVLHGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGY 304 Query: 442 SQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNA 263 +Q LESY+S+T++ MA +FGVTV++IDQEL+RFIAAG+LH K+D+V G++ETNRPD +N Sbjct: 305 TQLLESYRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVETNRPDNKNW 364 Query: 262 FYQSTIKQGDFLLNRIQKLSRVID 191 YQ+TIKQGD LLNRIQKLSRVI+ Sbjct: 365 QYQATIKQGDLLLNRIQKLSRVIN 388
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 176 bits (446), Expect = 5e-44 Identities = 86/144 (59%), Positives = 111/144 (77%) Frame = -3 Query: 622 EILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVY 443 EIL V+ +P + ++L SLY C+Y FF + + + +++K D PH+RYY+RE+R Y Sbjct: 245 EILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAY 304 Query: 442 SQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNA 263 SQ LESY+S+T+ MA AFGV VDFIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N Sbjct: 305 SQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNW 364 Query: 262 FYQSTIKQGDFLLNRIQKLSRVID 191 YQ TIK+GD LLNR+QKLSRVI+ Sbjct: 365 QYQETIKKGDLLLNRVQKLSRVIN 388
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 175 bits (443), Expect = 1e-43 Identities = 85/144 (59%), Positives = 111/144 (77%) Frame = -3 Query: 622 EILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVY 443 EIL V+ +P + ++L SLY C+Y FF + + + +++K D PH+RYY+RE+R Y Sbjct: 245 EILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAY 304 Query: 442 SQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNA 263 SQ LESY+S+T+ MA AFGV V+FIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N Sbjct: 305 SQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNW 364 Query: 262 FYQSTIKQGDFLLNRIQKLSRVID 191 YQ TIK+GD LLNR+QKLSRVI+ Sbjct: 365 QYQETIKKGDLLLNRVQKLSRVIN 388
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 143 bits (360), Expect = 5e-34 Identities = 68/149 (45%), Positives = 106/149 (71%), Gaps = 4/149 (2%) Frame = -3 Query: 628 APEILAVIGKVPHLSEF---LNSLYNCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMRE 461 +PE+LAV+ + +S +NSLY C Y FF + + + +K D++L H+RYY+RE Sbjct: 254 SPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYVRE 313 Query: 460 VRTVVYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNR 281 +R Y+Q LESY+++++++MA++FGV+VD+ID++L+ FI KL+C ID+V GV+ TNR Sbjct: 314 MRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFTNR 373 Query: 280 PDERNAFYQSTIKQGDFLLNRIQKLSRVI 194 PDE+N YQ +KQGD LLN++QK + Sbjct: 374 PDEKNRQYQEVVKQGDVLLNKLQKYQATV 402
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 142 bits (358), Expect = 8e-34 Identities = 71/139 (51%), Positives = 92/139 (66%), Gaps = 1/139 (0%) Frame = -3 Query: 604 GKVPHLSEFLNSLYNCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMREVRTVVYSQFLE 428 G + + E+L S Y+C Y FF+ + L E+ K DRYL PHF YY R +R Y QFL Sbjct: 271 GTLIPVREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQFLT 330 Query: 427 SYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQST 248 YK+V ++ MA FGV+ FID+EL R IA G+L C+ID V GV+E N D +N Y++ Sbjct: 331 PYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLYKAV 390 Query: 247 IKQGDFLLNRIQKLSRVID 191 IK GD LLNRIQKL+RVI+ Sbjct: 391 IKDGDILLNRIQKLARVIN 409
>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7| Length = 429 Score = 119 bits (297), Expect = 1e-26 Identities = 62/149 (41%), Positives = 95/149 (63%), Gaps = 4/149 (2%) Frame = -3 Query: 628 APEILAVIGKVPHL---SEFLNSLYNCQYKSFFVAFSGLMEQIKLD-RYLQPHFRYYMRE 461 +PE+L++I L S SLY Y S+F + + +YL H +++RE Sbjct: 273 SPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVRE 332 Query: 460 VRTVVYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNR 281 +R VY+Q LESYK++++++MASAFGV+V F+D +L +FI +L+C ID+V G++ETNR Sbjct: 333 MRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETNR 392 Query: 280 PDERNAFYQSTIKQGDFLLNRIQKLSRVI 194 PD +NA Y +KQGD LL ++QK + Sbjct: 393 PDNKNAQYHLLVKQGDGLLTKLQKYGAAV 421
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 67.0 bits (162), Expect = 4e-11 Identities = 32/120 (26%), Positives = 59/120 (49%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P + + + Y +Y S + + + LD YL PH R ++R Q+ Y S Sbjct: 320 PQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVS 379 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 236 M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ ++ +++ G Sbjct: 380 ADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMG 439
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 65.9 bits (159), Expect = 1e-10 Identities = 32/120 (26%), Positives = 58/120 (48%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P + + + Y +Y S + + + LD YL PH R ++R Q+ Y S Sbjct: 304 PQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVS 363 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 236 M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ ++ ++ G Sbjct: 364 ADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 65.5 bits (158), Expect = 1e-10 Identities = 32/120 (26%), Positives = 58/120 (48%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P + + + Y +Y S + + + LD YL PH R ++R Q+ Y S Sbjct: 304 PQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVS 363 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 236 M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ ++ ++ G Sbjct: 364 ADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 64.7 bits (156), Expect = 2e-10 Identities = 31/120 (25%), Positives = 57/120 (47%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P + + + Y +Y S + + + LD YL PH R ++R Q+ Y S Sbjct: 304 PQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVS 363 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 236 M MA+AF TV ++ EL++ I G + ++D + +L D+R+ ++ ++ G Sbjct: 364 ADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_ARATH (P45432) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) Length = 441 Score = 62.8 bits (151), Expect = 8e-10 Identities = 33/122 (27%), Positives = 58/122 (47%) Frame = -3 Query: 598 VPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 419 VP + E +N Y+ +Y S + L + LD +L H ++R Q+ + Sbjct: 292 VPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFV 351 Query: 418 SVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQ 239 SV + MA AF +V +++EL I ++ +ID +L D+RNA +Q ++ Sbjct: 352 SVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQM 411 Query: 238 GD 233 G+ Sbjct: 412 GN 413
>CSN1_DROME (Q9VVU5) COP9 signalosome complex subunit 1b (Signalosome subunit| 1b) (Dch1-2) Length = 525 Score = 59.7 bits (143), Expect = 7e-09 Identities = 29/120 (24%), Positives = 54/120 (45%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P L + + Y +Y S + + + +D Y+ PH ++R Q+ Y S Sbjct: 353 PQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMS 412 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 236 M MA AF +V ++ E+ + I G++ +ID +L D+RN+ ++ + G Sbjct: 413 ADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMG 472
>CSN2_DROME (Q94899) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (Dch2) (Alien protein) Length = 444 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/140 (23%), Positives = 62/140 (44%) Frame = -3 Query: 625 PEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVV 446 PEILA ++ +NS N F I D++++ H +R +RT V Sbjct: 307 PEILA-------MTNLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQV 359 Query: 445 YSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERN 266 + + YK++ + +A+A + ++ L I + +ID+V VL+ ++ + Sbjct: 360 LIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSA 419 Query: 265 AFYQSTIKQGDFLLNRIQKL 206 + Y + K N+IQ L Sbjct: 420 SRYNALEKWS----NQIQSL 435
>PSD12_MOUSE (Q9D8W5) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/77 (25%), Positives = 40/77 (51%) Frame = -3 Query: 424 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 245 Y +TM+ MA ++VD + LS + + K+D++AGV+ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPNNLLNDWS 428 Query: 244 KQGDFLLNRIQKLSRVI 194 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>PSD12_PONPY (Q5RBI3) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/77 (24%), Positives = 40/77 (51%) Frame = -3 Query: 424 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 245 Y +TM+ MA ++VD + LS + + K+D++AG++ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 428 Query: 244 KQGDFLLNRIQKLSRVI 194 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>PSD12_HUMAN (O00232) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/77 (24%), Positives = 40/77 (51%) Frame = -3 Query: 424 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 245 Y +TM+ MA ++VD + LS + + K+D++AG++ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 428 Query: 244 KQGDFLLNRIQKLSRVI 194 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>CSN1_SCHPO (O94308) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (SGN1) Length = 422 Score = 37.0 bits (84), Expect = 0.048 Identities = 24/97 (24%), Positives = 39/97 (40%) Frame = -3 Query: 595 PHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKS 416 P L L + N +Y + LD YL P +R +L Y + Sbjct: 262 PSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLIRERSLLDYLIPYSA 321 Query: 415 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKV 305 + +A F + +FI++ L I A KL+ K+D + Sbjct: 322 LPFSKIAVDFHIDENFIEKNLLEIIEAKKLNGKVDSL 358
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 33.1 bits (74), Expect = 0.70 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -2 Query: 500 PLSSTSFPLLHEGSAHCRLLTVFGVIQECDDGSYGF----CIWCDC 375 P + S P G C++ + + C DG YGF C+ C C Sbjct: 256 PHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQC 301
>DPO3_LISMO (Q8Y7G1) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -3 Query: 598 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 425 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 424 YKSVTMEAMASAF 386 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>DPO3_LISMF (Q720A2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -3 Query: 598 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 425 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 424 YKSVTMEAMASAF 386 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>DPO3_LISIN (Q92C34) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -3 Query: 598 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 425 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAKNAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 424 YKSVTMEAMASAF 386 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor| Length = 3718 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Frame = -2 Query: 464 GSAHCRLLTVFGVIQECDDGSYGF--CIWCDC 375 G HCR QEC G YGF CI C C Sbjct: 654 GLCHCRPGNTGATCQECSPGFYGFPSCIPCHC 685 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,197,915 Number of Sequences: 219361 Number of extensions: 1858900 Number of successful extensions: 4858 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4856 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
