ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23i22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence Length = 1636 Score = 496 bits (250), Expect = e-137 Identities = 397/446 (89%) Strand = Plus / Minus Query: 185 ttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgctt 244 |||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1293 ttacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgctt 1234 Query: 245 gatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagc 304 |||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1233 gatggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagc 1174 Query: 305 gaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtc 364 ||||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 1173 aaccttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtc 1114 Query: 365 tatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgta 424 |||||||||||||| ||||| || |||| ||||| |||||||| |||||||||||||| Sbjct: 1113 aatgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgta 1054 Query: 425 tgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatg 484 |||||| || ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 1053 tgactctaagaactgtgagtataccacggtgcgcacttccctcatgtagtagcggaaatg 994 Query: 485 aggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaa 544 ||| ||||||||||||||||||||||| || || ||| ||||| |||||||| || || Sbjct: 993 aggctgaagataacggtctaacttgatttgctctgtcagaccagaaaatgcaacgaagaa 934 Query: 545 tgacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcc 604 ||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 933 cgacttatactggcagttgtacagggagttgagaaactcggagaggtgaggtactttgcc 874 Query: 605 tatcactgcaaggatttctggtgcat 630 || || || |||||||||||||||| Sbjct: 873 aattacagccaggatttctggtgcat 848
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence Length = 1631 Score = 496 bits (250), Expect = e-137 Identities = 397/446 (89%) Strand = Plus / Minus Query: 185 ttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgctt 244 |||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1308 ttacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgctt 1249 Query: 245 gatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagc 304 |||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1248 gatggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagc 1189 Query: 305 gaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtc 364 ||||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 1188 aaccttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtc 1129 Query: 365 tatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgta 424 |||||||||||||| ||||| || |||| ||||| |||||||| |||||||||||||| Sbjct: 1128 aatgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgta 1069 Query: 425 tgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatg 484 |||||| || ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 1068 tgactctaagaactgtgagtataccacggtgcgcacttccctcatgtagtagcggaaatg 1009 Query: 485 aggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaa 544 ||| ||||||||||||||||||||||| || || ||| ||||| |||||||| || || Sbjct: 1008 aggctgaagataacggtctaacttgatttgctctgtcagaccagaaaatgcaacgaagaa 949 Query: 545 tgacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcc 604 ||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 948 cgacttatactggcagttgtacagggagttgagaaactcggagaggtgaggtactttgcc 889 Query: 605 tatcactgcaaggatttctggtgcat 630 || || || |||||||||||||||| Sbjct: 888 aattacagccaggatttctggtgcat 863
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full insert sequence Length = 1371 Score = 482 bits (243), Expect = e-133 Identities = 390/439 (88%) Strand = Plus / Minus Query: 192 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 251 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 1134 Query: 252 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 311 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 1133 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 1074 Query: 312 tcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatgaaa 371 || ||||||||||||||||| ||||||||||| || || || | |||||||||||||||| Sbjct: 1073 tcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcctggtctatgaaa 1014 Query: 372 tcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtatgactcc 431 |||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||| Sbjct: 1013 tcaacagtcacaccaaatgctgcggccatcgcttccattgtcacactcttgtatgactcc 954 Query: 432 aaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatgaggttga 491 ||||||||||| ||||| || || |||||||||||||| ||||||||||||| ||| ||| Sbjct: 953 aaaaactgtgaatagacaacggtccgcacttccctcatatagtagcggaaatcaggctga 894 Query: 492 agataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaatgacttg 551 ||||| || || ||||| ||||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 893 agatagcgatccaacttaatctgctccgtcatgccagagaatgcaacaaaaaatgacttg 834 Query: 552 tactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcctatcact 611 |||||||||||||| |||||||| |||||||| || || || ||||||||||| |||||| Sbjct: 833 tactggcaattgtaaagggagttcagaaactcagatagatgaggtactttgccaatcact 774 Query: 612 gcaaggatttctggtgcat 630 || | ||||||||||||| Sbjct: 773 gccaaaatttctggtgcat 755
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 438 bits (221), Expect = e-119 Identities = 389/445 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1169 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1110 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1109 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1050 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 365 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1049 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 990 Query: 366 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 425 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 989 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 930 Query: 426 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 485 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 929 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 870 Query: 486 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 545 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 869 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 810 Query: 546 gacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcct 605 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 809 gacttgtactggcaattgtagagggagttgagaaactcagagaggtgaggtactttgcca 750 Query: 606 atcactgcaaggatttctggtgcat 630 || || || ||||| || ||||||| Sbjct: 749 attacagccaggatctcaggtgcat 725
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full insert sequence Length = 1510 Score = 438 bits (221), Expect = e-119 Identities = 389/445 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1290 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1231 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1230 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1171 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 365 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1170 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1111 Query: 366 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 425 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1110 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1051 Query: 426 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 485 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1050 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 991 Query: 486 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 545 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 990 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 931 Query: 546 gacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcct 605 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 930 gacttgtactggcaattgtagagggagttgagaaactcagagaggtgaggtactttgcca 871 Query: 606 atcactgcaaggatttctggtgcat 630 || || || ||||| || ||||||| Sbjct: 870 attacagccaggatctcaggtgcat 846
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full insert sequence Length = 1515 Score = 438 bits (221), Expect = e-119 Identities = 389/445 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1295 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1236 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1235 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1176 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 365 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1175 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1116 Query: 366 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 425 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1115 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1056 Query: 426 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 485 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1055 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 996 Query: 486 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 545 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 995 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 936 Query: 546 gacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcct 605 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 935 gacttgtactggcaattgtagagggagttgagaaactcagagaggtgaggtactttgcca 876 Query: 606 atcactgcaaggatttctggtgcat 630 || || || ||||| || ||||||| Sbjct: 875 attacagccaggatctcaggtgcat 851
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome regulatory particle non-ATPase subunit7, complete cds Length = 1547 Score = 438 bits (221), Expect = e-119 Identities = 389/445 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1253 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1194 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1193 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1134 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 365 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1133 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1074 Query: 366 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 425 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1073 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1014 Query: 426 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 485 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1013 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 954 Query: 486 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 545 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 953 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 894 Query: 546 gacttgtactggcaattgtacagggagttaagaaactctgagaggtgtggtactttgcct 605 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 893 gacttgtactggcaattgtagagggagttgagaaactcagagaggtgaggtactttgcca 834 Query: 606 atcactgcaaggatttctggtgcat 630 || || || ||||| || ||||||| Sbjct: 833 attacagccaggatctcaggtgcat 809
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence Length = 1443 Score = 371 bits (187), Expect = 2e-99 Identities = 352/407 (86%) Strand = Plus / Minus Query: 198 actcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactgg 257 ||||| || |||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 1201 actcgtgacagcttctggatgcggttcagcaggaagtctccttgcttgatggttgcctgg 1142 Query: 258 tagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatc 317 ||||| || ||||| ||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct: 1141 tagaaggcgttcctagcatcaggtcggttcgtttccaagacgccagcaactttgtctatc 1082 Query: 318 ttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaaca 377 |||||||| ||||| ||||| ||||| || || || |||||||||||||| || || || Sbjct: 1081 ttgcagtggagcttcccagcggcaatgaagcgtgacagttcctggtctataaagtcgact 1022 Query: 378 gtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaac 437 || || |||||||||| |||||| |||||||| |||||||||||||| || |||| |||| Sbjct: 1021 gtgacgccaaatgcagcagccatggcttccattgtcacactcttgtacgattccagaaac 962 Query: 438 tgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatgaggttgaagataa 497 ||||||||||| |||||||||||||| | |||||||||||| |||||||| || | ||| Sbjct: 961 tgtgagtagacaacagtgcgcacttcacgcatgtagtagcgaaaatgaggctgcaagtaa 902 Query: 498 cggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaatgacttgtactgg 557 || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 901 cgctctaacttgattggttcagtcaagccagagaatgcaataaaaaatgacttgtactgg 842 Query: 558 caattgtacagggagttaagaaactctgagaggtgtggtactttgcc 604 |||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 841 caattgtagagggaattgagaaactctgagaggtgaggtactttgcc 795
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 359 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 418 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 23484687 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 23484628 Query: 419 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 478 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 23484627 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 23484568 Query: 479 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 23484567 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 23484518 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 192 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 251 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23484968 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 23484909 Query: 252 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 311 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 23484908 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 23484849 Query: 312 tcaatcttgcagtgaagcttgccagctgcaat 343 || ||||||||||||||||| ||||||||||| Sbjct: 23484848 tcgatcttgcagtgaagcttcccagctgcaat 23484817 Score = 123 bits (62), Expect = 7e-25 Identities = 92/102 (90%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || | Sbjct: 23484422 agaatgcaacaaaaaatgacttgtactggcaattgtaaagggagttcagaaactcagata 23484363 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 | || ||||||||||| |||||||| | ||||||||||||| Sbjct: 23484362 gatgaggtactttgccaatcactgccaaaatttctggtgcat 23484321
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 359 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 418 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 50370 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 50311 Query: 419 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 478 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 50310 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 50251 Query: 479 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 50250 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 50201 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 192 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 251 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 50651 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 50592 Query: 252 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 311 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 50591 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 50532 Query: 312 tcaatcttgcagtgaagcttgccagctgcaat 343 || ||||||||||||||||| ||||||||||| Sbjct: 50531 tcgatcttgcagtgaagcttcccagctgcaat 50500 Score = 123 bits (62), Expect = 7e-25 Identities = 92/102 (90%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || | Sbjct: 50105 agaatgcaacaaaaaatgacttgtactggcaattgtaaagggagttcagaaactcagata 50046 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 | || ||||||||||| |||||||| | ||||||||||||| Sbjct: 50045 gatgaggtactttgccaatcactgccaaaatttctggtgcat 50004
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 359 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 418 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 103362 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 103303 Query: 419 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 478 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 103302 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 103243 Query: 479 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 103242 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 103193 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 192 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 251 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103643 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 103584 Query: 252 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 311 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 103583 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 103524 Query: 312 tcaatcttgcagtgaagcttgccagctgcaat 343 || ||||||||||||||||| ||||||||||| Sbjct: 103523 tcgatcttgcagtgaagcttcccagctgcaat 103492 Score = 123 bits (62), Expect = 7e-25 Identities = 92/102 (90%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || | Sbjct: 103097 agaatgcaacaaaaaatgacttgtactggcaattgtaaagggagttcagaaactcagata 103038 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 | || ||||||||||| |||||||| | ||||||||||||| Sbjct: 103037 gatgaggtactttgccaatcactgccaaaatttctggtgcat 102996
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 361 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 420 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 40852 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 40793 Query: 421 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 480 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 40792 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 40733 Query: 481 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 40732 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 40685 Score = 163 bits (82), Expect = 9e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 41131 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 41072 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 41071 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 41012 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaat 343 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 41011 accttatcgatcttgcagtggagctttccagcagcaat 40974 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 40557 agaatgcggcaaaaaatgacttgtactggcaattgtagagggagttgagaaactcagaga 40498 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 |||| ||||||||||| || || || ||||| || ||||||| Sbjct: 40497 ggtgaggtactttgccaattacagccaggatctcaggtgcat 40456
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 361 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 420 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107665 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 107606 Query: 421 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 480 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 107605 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 107546 Query: 481 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 107545 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 107498 Score = 163 bits (82), Expect = 9e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 107944 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 107885 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 107884 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 107825 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaat 343 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 107824 accttatcgatcttgcagtggagctttccagcagcaat 107787 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 107370 agaatgcggcaaaaaatgacttgtactggcaattgtagagggagttgagaaactcagaga 107311 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 |||| ||||||||||| || || || ||||| || ||||||| Sbjct: 107310 ggtgaggtactttgccaattacagccaggatctcaggtgcat 107269
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 361 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 420 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24218440 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 24218381 Query: 421 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 480 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 24218380 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 24218321 Query: 481 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 24218320 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 24218273 Score = 163 bits (82), Expect = 9e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 24218719 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 24218660 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 24218659 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 24218600 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaat 343 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 24218599 accttatcgatcttgcagtggagctttccagcagcaat 24218562 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 24218145 agaatgcggcaaaaaatgacttgtactggcaattgtagagggagttgagaaactcagaga 24218086 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 |||| ||||||||||| || || || ||||| || ||||||| Sbjct: 24218085 ggtgaggtactttgccaattacagccaggatctcaggtgcat 24218044
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 361 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 420 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12895 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 12836 Query: 421 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 480 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 12835 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 12776 Query: 481 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 528 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 12775 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 12728 Score = 170 bits (86), Expect = 4e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 186 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 245 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13174 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 13115 Query: 246 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 305 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || ||||| Sbjct: 13114 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgccagca 13055 Query: 306 accttgtcaatcttgcagtgaagcttgccagctgcaat 343 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 13054 accttatcgatcttgcagtggagctttccagcagcaat 13017 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 529 agaatgcaacaaaaaatgacttgtactggcaattgtacagggagttaagaaactctgaga 588 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 12600 agaatgcggcaaaaaatgacttgtactggcaattgtagagggagttgagaaactcagaga 12541 Query: 589 ggtgtggtactttgcctatcactgcaaggatttctggtgcat 630 |||| ||||||||||| || || || ||||| || ||||||| Sbjct: 12540 ggtgaggtactttgccaattacagccaggatctcaggtgcat 12499
>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.1 mRNA, complete cds Length = 1595 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.2 mRNA, complete cds Length = 1462 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA, complete cds Length = 1421 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1175 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1116 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1115 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1056 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1055 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 996 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 995 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 936 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 935 accactgttctgacttccctcatgtagaaccggaaatg 898
>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence Length = 1161 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1139 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1080 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1079 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1020 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1019 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 960 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 959 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 900 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 899 accactgttctgacttccctcatgtagaaccggaaatg 862
>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1443 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1192 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1133 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1132 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1073 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1072 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1013 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1012 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 953 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 952 accactgttctgacttccctcatgtagaaccggaaatg 915
>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1446 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1142 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1083 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1082 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1023 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1022 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 963 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 962 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 903 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 902 accactgttctgacttccctcatgtagaaccggaaatg 865
>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820; F6I7.30) mRNA, complete cds Length = 1595 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence Length = 1482 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1245 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1186 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1185 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1126 Query: 327 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 386 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1125 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1066 Query: 387 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 446 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1065 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1006 Query: 447 acgacagtgcgcacttccctcatgtagtagcggaaatg 484 || || || | ||||||||||||||| | |||||||| Sbjct: 1005 accactgttctgacttccctcatgtagaaccggaaatg 968
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 64799 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 64858 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 64859 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 64918 Query: 327 agcttgccagctgcaat 343 ||||| ||||| ||||| Sbjct: 64919 agcttcccagcagcaat 64935 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 411 gtcacactcttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatg 470 |||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||| Sbjct: 65124 gtcacacttttgtaagattccaaaaactgagagtacaccactgttctgacttccctcatg 65183 Query: 471 tagtagcggaaatg 484 ||| | |||||||| Sbjct: 65184 tagaaccggaaatg 65197
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 207 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 266 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 35375 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 35434 Query: 267 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 326 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 35435 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 35494 Query: 327 agcttgccagctgcaat 343 ||||| ||||| ||||| Sbjct: 35495 agcttcccagcagcaat 35511 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 411 gtcacactcttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatg 470 |||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||| Sbjct: 35700 gtcacacttttgtaagattccaaaaactgagagtacaccactgttctgacttccctcatg 35759 Query: 471 tagtagcggaaatg 484 ||| | |||||||| Sbjct: 35760 tagaaccggaaatg 35773
>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 117 bits (59), Expect = 5e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 274 catcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtgaagcttgc 333 ||||||| |||||||||||||||||||| || |||||||| ||||| ||||||||||| | Sbjct: 1096 catcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtgaagcttcc 1037 Query: 334 cagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacaccaaatgcag 393 |||| ||||| || || || | ||||||||||||||||| |||| || ||||| || Sbjct: 1036 cagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgccaaaggcct 977 Query: 394 aagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacag 453 ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| || || | Sbjct: 976 ttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtacaccactg 917 Query: 454 tgcgcacttccctcatgtagtagcggaaatg 484 | | ||||||||||||||| | |||||||| Sbjct: 916 ttctgacttccctcatgtagaaccggaaatg 886
>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence Length = 1278 Score = 81.8 bits (41), Expect = 3e-12 Identities = 149/185 (80%) Strand = Plus / Minus Query: 189 agatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatg 248 ||||||||||| || || ||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 1117 agatcaatgacacgagaaagcttttgaatgcgattcaacaagaagtccccttgcttgata 1058 Query: 249 gtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgacc 308 || | ||| || | ||||||| | ||||||| || || || ||||| || || || || Sbjct: 1057 gttgcctgataaagagcattctttgcatcaggacgattagtttccaatactcctgctact 998 Query: 309 ttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatg 368 || ||||||||||| || | ||| ||||||||||| || ||||| |||||| ||| ||| Sbjct: 997 ttatcaatcttgcaatgcaacttcccagctgcaatgaaccgagatagttccaagtcgatg 938 Query: 369 aaatc 373 ||||| Sbjct: 937 aaatc 933
>gb|AF051233.1|AF051233 Picea mariana KIAA0107-like protein (Sb46) mRNA, partial cds Length = 980 Score = 73.8 bits (37), Expect = 6e-10 Identities = 226/289 (78%) Strand = Plus / Minus Query: 181 acttttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtcccctt 240 ||||||| || ||||| |||| ||| |||||||| |||||||||| ||| ||||| |||| Sbjct: 703 acttttaaaggtcaattactctggagagcttctgaatgcggttcaacaaaaagtctcctt 644 Query: 241 gcttgatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacac 300 |||| || || | || || | |||||| || |||| |||| ||| || || | ||||| Sbjct: 643 gcttaatagttgcttgataaagagcatttttcgcatctggcctgttagtttctagaacac 584 Query: 301 cagcgaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcct 360 || | || || || || |||||||||||| | || || || || |||||||| |||||| Sbjct: 583 caacaactttatctattttgcagtgaagcctacctgcggctatgaaacgagagagttccc 524 Query: 361 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 420 ||| || ||||||||| | |||||||| || |||||||||||||| || ||||||| Sbjct: 523 tgtcaataaaatcaacactaacaccaaaagctcttgccatagcttccatggttacactct 464 Query: 421 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcat 469 |||| || || | |||||| || || || ||||| || ||||| ||||| Sbjct: 463 tgtaggattctagaaactgagaatacacaacagtacggacttctctcat 415
>emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 487 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 274 catcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtgaagcttgc 333 ||||||| |||||||||||||||| ||| || ||||||| || || ||||||||||| | Sbjct: 86 catcaggacggtttgtctccaaaaaacctgcaaccttgtttattttacagtgaagcttcc 27 Query: 334 cagctgcaataaa 346 |||| |||||||| Sbjct: 26 cagcagcaataaa 14
>gb|DQ087931.1| Larix potaninii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087930.1| Larix griffithiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 861 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087929.1| Larix mastersiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087928.1| Larix gmelinii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087927.1| Larix occidentalis probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgcgaatacacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087925.1| Larix sibirica probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 889 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087924.1| Larix kaempferi probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087923.1| Larix decidua probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087922.1| Larix laricina probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 396 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 455 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 456 cgcacttccctcatgta 472 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete sequence Length = 191883 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 165 tccaacaagaacagcaactttta 187 ||||||||||||||||||||||| Sbjct: 70063 tccaacaagaacagcaactttta 70041
>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence Length = 169193 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gtagaaagcattcctctcatc 277 ||||||||||||||||||||| Sbjct: 109761 gtagaaagcattcctctcatc 109781
>gb|AC166055.5| Mus musculus BAC clone RP23-462B19 from chromosome 9, complete sequence Length = 180798 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tttgctgggtcagagctcca 168 |||||||||||||||||||| Sbjct: 107947 tttgctgggtcagagctcca 107928
>gb|DQ205185.1| Homo sapiens scavenger receptor class A, member 3 (SCARA3) gene, complete cds Length = 42630 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 atccttcagcctgatcttctggga 34 |||||| ||||||||||||||||| Sbjct: 550 atccttaagcctgatcttctggga 573
>gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226276 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tagcttccatcgtcacactc 419 |||||||||||||||||||| Sbjct: 159971 tagcttccatcgtcacactc 159952
>emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, complete sequence Length = 19170 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 caacagtcacaccaaatgcagaag 396 |||| ||||||||||||||||||| Sbjct: 11514 caacggtcacaccaaatgcagaag 11491
>gb|AC163290.2| Mus musculus BAC clone RP23-270I16 from chromosome 9, complete sequence Length = 195649 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tccatcaagccagagaatgc 535 |||||||||||||||||||| Sbjct: 59159 tccatcaagccagagaatgc 59178
>gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome 17, complete sequence Length = 199202 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gcaacaaaaaatgacttgta 553 |||||||||||||||||||| Sbjct: 95869 gcaacaaaaaatgacttgta 95888
>emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on chromosome 9 Contains the UBAP gene for ubiquitin associated protein, the gene for a novel protein similar to kinesin-like proteins, the KIF24 gene for kinesin family member 24 (FLJ10933), ribosomal protein S8 (RPS8) and L35A (RPL35A) pseudogenes, a serine (or cysteine) proteinase inhibitor (collagen binding protein 1) (SERPINH1) pseudogene, the 5' end of the NUDT2 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 2 and three CpG islands, complete sequence Length = 167998 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 acaccaaatgcagaagccat 400 |||||||||||||||||||| Sbjct: 7314 acaccaaatgcagaagccat 7295
>emb|AL136116.11| Human DNA sequence from clone RP1-95L4 on chromosome 6 Contains the 3' end of the gene for androgen induced protein (AIG-1) (CGI-103) (includes FLJ10485), a pseudogene similar to actin genes, a ribosomal protein L31 (RPL31) pseudogene and a pseudogene similar to hypothetical proteins PRO2207 and similar to presenilins associated rhomboid-like protein, complete sequence Length = 100815 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 agaaagcattcctctcatca 278 |||||||||||||||||||| Sbjct: 19800 agaaagcattcctctcatca 19819
>gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence Length = 175380 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 atccttcagcctgatcttctggga 34 |||||| ||||||||||||||||| Sbjct: 24049 atccttaagcctgatcttctggga 24072
>gb|AF233390.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence Length = 95005 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 atccttcagcctgatcttctggga 34 |||||| ||||||||||||||||| Sbjct: 8537 atccttaagcctgatcttctggga 8560
>gb|AF375668.1| Sus scrofa microsatellite UMNp35 sequence Length = 497 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggaaatgaggttgaagataa 497 |||||||||||||||||||| Sbjct: 38 ggaaatgaggttgaagataa 19
>gb|AC009711.10| Homo sapiens chromosome 15, clone RP11-356B18, complete sequence Length = 205925 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ttcatagtaattcatacaag 60 |||||||||||||||||||| Sbjct: 113653 ttcatagtaattcatacaag 113672
>gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, complete sequence Length = 157324 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 atccttcagcctgatcttctggga 34 |||||| ||||||||||||||||| Sbjct: 20568 atccttaagcctgatcttctggga 20591
>gb|AC175055.3| Mus musculus BAC clone RP24-233C1 from chromosome y, complete sequence Length = 173578 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gaagtccccttgcttgatgg 249 |||||||||||||||||||| Sbjct: 171883 gaagtccccttgcttgatgg 171864
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tatgactccaaaaactgtga 442 |||||||||||||||||||| Sbjct: 15868521 tatgactccaaaaactgtga 15868540
>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence Length = 171209 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atgcaacaaaaaatgacttg 551 |||||||||||||||||||| Sbjct: 22292 atgcaacaaaaaatgacttg 22311
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tatgactccaaaaactgtga 442 |||||||||||||||||||| Sbjct: 1970 tatgactccaaaaactgtga 1989
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tatgactccaaaaactgtga 442 |||||||||||||||||||| Sbjct: 81524 tatgactccaaaaactgtga 81543
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 caacagtcacaccaaatgca 392 |||||||||||||||||||| Sbjct: 1026084 caacagtcacaccaaatgca 1026065
>emb|CR792419.10| Zebrafish DNA sequence from clone DKEY-11A2 in linkage group 3, complete sequence Length = 61995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 caacaaagccaggcactggc 98 |||||||||||||||||||| Sbjct: 43909 caacaaagccaggcactggc 43928
>gb|AC134456.4| Mus musculus BAC clone RP23-335J2 from chromosome 9, complete sequence Length = 186487 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tccatcaagccagagaatgc 535 |||||||||||||||||||| Sbjct: 140948 tccatcaagccagagaatgc 140967
>gb|AF051374.1|AF051374 Fusobacterium nucleatum adenylosuccinate synthetase (purA), FnuDI restriction endonuclease (fnuDIR), and FnuDI DNA modification methyltransferase (fnuDIM) genes, complete cds Length = 4241 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ccttgtcaatcttgcagtgaagct 330 |||||||||||||| ||||||||| Sbjct: 3056 ccttgtcaatcttggagtgaagct 3079
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atgcaacaaaaaatgacttg 551 |||||||||||||||||||| Sbjct: 1654936 atgcaacaaaaaatgacttg 1654955
>gb|AC122042.6| Mus musculus BAC clone RP24-446B12 from chromosome 6, complete sequence Length = 191132 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 attgtacagggagttaagaa 579 |||||||||||||||||||| Sbjct: 130656 attgtacagggagttaagaa 130675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,438,911 Number of Sequences: 3902068 Number of extensions: 5438911 Number of successful extensions: 96782 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96552 Number of HSP's gapped (non-prelim): 228 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
