ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23i20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A08, full insert sequence Length = 537 Score = 365 bits (184), Expect = 8e-98 Identities = 264/291 (90%) Strand = Plus / Minus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 365 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 306 Query: 185 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 244 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 305 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 246 Query: 245 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagta 304 |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 245 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagta 186 Query: 305 cttggagtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacct 364 ||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||| Sbjct: 185 cttggagtgctgagaaacctccatcttcttgatttgcttacgcaaactggcaccatacct 126 Query: 365 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcatctc 415 || ||||| || || || |||||||||||||||||||||||||||||||| Sbjct: 125 agtaccatatttgccaacaattccagccttcttggtgcgcttcgtcatctc 75
>dbj|AK119702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D09, full insert sequence Length = 564 Score = 357 bits (180), Expect = 2e-95 Identities = 263/291 (90%) Strand = Plus / Minus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 365 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 306 Query: 185 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 244 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 305 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 246 Query: 245 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagta 304 |||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 245 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagta 186 Query: 305 cttggagtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacct 364 ||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 185 cttggagtgctgagaaacctccatcttcttgatttgcttacgcaaactggcaccataccc 126 Query: 365 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcatctc 415 || ||||| || || || |||||||||||||||||||||||||||||||| Sbjct: 125 agtaccatatttgccaacaattccagccttcttggtgcgcttcgtcatctc 75
>gb|AY109323.1| Zea mays CL4004_3 mRNA sequence Length = 1730 Score = 353 bits (178), Expect = 3e-94 Identities = 258/285 (90%) Strand = Plus / Minus Query: 131 cgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 190 |||||| ||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 1539 cgatcatgcttcagtctgctccctcaagcgacggatcgtgctcctgacagtgaccgcact 1480 Query: 191 agccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatcccca 250 ||| ||||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1479 agcagtgttcatggtgtaagcaccaccggccttgaccttcccacagtccttgcatcccca 1420 Query: 251 aattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttgga 310 ||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1419 aatcccaaccgctttcctcttcacagcaaacttcccacagaactcacagaaatacttgga 1360 Query: 311 gtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttcc 370 ||||||||| |||| |||||||||||| |||||||||| || ||||||||||||||||| Sbjct: 1359 gtgctgagatacctccatcttcttgatttgcttacgcaagctagcaccatacctggttcc 1300 Query: 371 atacttcccgacgattccagccttcttggtgcgcttcgtcatctc 415 ||| || || || ||||| ||||||||||| |||||||||||||| Sbjct: 1299 atatttgccaacaattccggccttcttggttcgcttcgtcatctc 1255
>dbj|AK059395.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A05, full insert sequence Length = 547 Score = 349 bits (176), Expect = 4e-93 Identities = 256/283 (90%) Strand = Plus / Minus Query: 132 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcacta 191 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 362 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcactg 303 Query: 192 gccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaa 251 || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 302 gcagtgttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccag 243 Query: 252 attccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggag 311 |||||||| ||||||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 242 attccaactgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggag 183 Query: 312 tgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttcca 371 ||||| || |||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 182 tgctgggaaacctccatcttcttgatctgcttacgcaaactggcaccatacctggtacca 123 Query: 372 tacttcccgacgattccagccttcttggtgcgcttcgtcatct 414 || || || |||||||| ||||||||||||||||||||||||| Sbjct: 122 tatttgccaacgattcctgccttcttggtgcgcttcgtcatct 80
>ref|NM_192041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 343 bits (173), Expect = 3e-91 Identities = 247/272 (90%) Strand = Plus / Minus Query: 138 gcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtg 197 ||||| ||||||||||||| ||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 365 gcttcagtctgctccctcagacgacggattgtgctcctgacagtgaccgcactagcagtg 306 Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 305 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 246 Query: 258 acagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctga 317 || |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 245 actgctttcctcttcacggcaaacttcccacagaactcacagaagtacttggagtgctga 186 Query: 318 gacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttc 377 || |||| |||||||||||| |||||||||| ||||||||||||||| || ||||| || Sbjct: 185 gaaacctccatcttcttgatttgcttacgcaaactggcaccatacctagtaccatatttg 126 Query: 378 ccgacgattccagccttcttggtgcgcttcgt 409 || || |||||||||||||||||||||||||| Sbjct: 125 ccaacaattccagccttcttggtgcgcttcgt 94
>ref|XM_475898.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 288 Score = 337 bits (170), Expect = 2e-89 Identities = 247/273 (90%) Strand = Plus / Minus Query: 138 gcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtg 197 ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| || ||| Sbjct: 284 gcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcactggcagtg 225 Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 224 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 165 Query: 258 acagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctga 317 || ||||||||||||||||||||||| || ||||| || |||||||||||||||||||| Sbjct: 164 actgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggagtgctgg 105 Query: 318 gacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttc 377 || |||| ||||||||||||||||||||||| |||||||||||||||||| ||||| || Sbjct: 104 gaaacctccatcttcttgatctgcttacgcaaactggcaccatacctggtaccatatttg 45 Query: 378 ccgacgattccagccttcttggtgcgcttcgtc 410 || |||||||| ||||||||||||||||||||| Sbjct: 44 ccaacgattcctgccttcttggtgcgcttcgtc 12
>gb|AY103695.1| Zea mays PCO065803 mRNA sequence Length = 774 Score = 327 bits (165), Expect = 2e-86 Identities = 251/280 (89%) Strand = Plus / Minus Query: 133 atcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactag 192 |||| ||||| |||||||| ||||| || || || ||||||||||| ||||| ||||||| Sbjct: 384 atcatgcttcagtctgctctctcaagcgacgaatcgtgctcctgacagtgactgcactag 325 Query: 193 ccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaa 252 | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 324 cagtgttcatggtgtaagcaccgccagccttgaccttcccacagtccttgcatccccaaa 265 Query: 253 ttccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagt 312 ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| Sbjct: 264 ttccaactgctttcctcttcacagcaaacttcccacaaaactcgcagaagtacttggagt 205 Query: 313 gctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccat 372 ||||||| |||| |||||||||||| |||||||||| || || |||||||||||||||| Sbjct: 204 gctgagatacctccatcttcttgatttgcttacgcaagctagcgccatacctggttccat 145 Query: 373 acttcccgacgattccagccttcttggtgcgcttcgtcat 412 | || || || ||||||||||||||||||||||||||||| Sbjct: 144 atttgccaacaattccagccttcttggtgcgcttcgtcat 105
>gb|AY111949.1| Zea mays CL4004_2 mRNA sequence Length = 536 Score = 285 bits (144), Expect = 6e-74 Identities = 248/283 (87%) Strand = Plus / Minus Query: 133 atcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactag 192 |||| |||||||||||||||| || || ||||| ||||| || || ||||||||||||| Sbjct: 353 atcatgcttcggtctgctcccgcaggcgccggattgtgcttctcacagtgaccgcactag 294 Query: 193 ccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaa 252 | |||||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 293 cagtgttcattgtgtaggcgccaccggccttaaccttcccacagtccttgcatccccaga 234 Query: 253 ttccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagt 312 | ||||| |||||||||||||| |||||||| || ||||| ||||||||||| ||||||| Sbjct: 233 taccaactgctttcctcttcacggcaaacttgccacagaactcacagaagtatttggagt 174 Query: 313 gctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccat 372 |||| || |||| ||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 173 gctgcgagacctccatcttcttgatctgtttacgtaaactggcaccatacctggtaccat 114 Query: 373 acttcccgacgattccagccttcttggtgcgcttcgtcatctc 415 | || || |||||||| |||||||||||||| ||||||||||| Sbjct: 113 atttgccaacgattcctgccttcttggtgcgtttcgtcatctc 71
>dbj|D29723.1|RICYK36 Oryza sativa mRNA, partial homologous to ribosomal protein L37a gene Length = 283 Score = 280 bits (141), Expect = 3e-72 Identities = 201/220 (91%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 195 gtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaatt 254 ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 281 gtgttcatgttgtaggcaccaccagccttgaccttgccacagtccttgcatccccagatt 222 Query: 255 ccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgc 314 ||||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 221 ccaactgctttcctcttcacagcaaacttgccacagaactcgcagaagtacttggagtgc 162 Query: 315 tgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccatac 374 || || |||| |||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 161 tgggaaacctccatcttcttgatct-cttacgcaaactggcaccatacctggtaccatat 103 Query: 375 ttcccgacgattccagccttcttggtgcgcttcgtcatct 414 || || |||||||| ||||||||||||||||||||||||| Sbjct: 102 ttgccaacgattcctgccttcttggtgcgcttcgtcatct 63
>gb|DQ083180.1| Oryza sativa (indica cultivar-group) clone 2S8C47 mRNA sequence Length = 308 Score = 228 bits (115), Expect = 1e-56 Identities = 163/179 (91%) Strand = Plus / Minus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 179 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacggtgac 120 Query: 185 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 244 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 119 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 60 Query: 245 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagt 303 |||||| |||||||| |||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 59 tccccagattccaactgctttcctcttcacggcaaacttcccacagaactcacagaagt 1
>dbj|AK059643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B10, full insert sequence Length = 370 Score = 206 bits (104), Expect = 4e-50 Identities = 152/168 (90%) Strand = Plus / Minus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 171 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 112 Query: 185 cgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttgca 244 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 111 cgcactagcagtgttcatggtgtaagcaccaccggccttcaccttcccacagtccttgca 52 Query: 245 tccccaaattccaacagctttcctcttcacagcaaacttcccgcagaa 292 |||||| |||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 51 tccccagattccaactgctttcctcttcacggcaaacttcccacagaa 4
>gb|AY491666.1| Capsicum annuum unknown mRNA Length = 504 Score = 153 bits (77), Expect = 5e-34 Identities = 208/252 (82%) Strand = Plus / Minus Query: 162 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 221 |||||||| ||||| || || || ||||| || ||||||| || || |||||||| || Sbjct: 277 cggatggtactcctaactgtaacagcacttgcagtgttcaatgtgtaagcaccaccggct 218 Query: 222 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 281 |||||||| ||||| || ||||| ||||||||||| |||||||||||||| || ||| || Sbjct: 217 ttgaccttgccacaatctttgcaaccccaaattcctacagctttcctctttactgcatac 158 Query: 282 ttcccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgc 341 || || || || || |||||||||||| ||||| |||| ||| || || |||||| Sbjct: 157 tttccacaaaactcgcagaagtacttgctatgctggctgacctccatttttttaatctgc 98 Query: 342 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggtg 401 |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| Sbjct: 97 ttacgcagactggcaccataacgggtaccatacttcccaacgattccagccttcttggtc 38 Query: 402 cgcttcgtcatc 413 | ||| |||||| Sbjct: 37 ctcttagtcatc 26
>emb|AJ879068.1| Capsicum chinense mRNA for 60S ribosomal protein L37a Length = 536 Score = 145 bits (73), Expect = 1e-31 Identities = 207/252 (82%) Strand = Plus / Minus Query: 162 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 221 |||||||| ||||| || || || ||||| || ||||||| || || |||||||| || Sbjct: 305 cggatggtactcctaactgtaacagcacttgcagtgttcaatgtgtaagcaccaccggct 246 Query: 222 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 281 |||||||| ||||| || ||||| ||||||||||| |||||||||||||| || ||| || Sbjct: 245 ttgaccttgccacaatctttgcaaccccaaattcctacagctttcctctttactgcatac 186 Query: 282 ttcccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgc 341 || || || || || |||||||||| | ||||| |||| ||| || || |||||| Sbjct: 185 tttccacaaaactcgcagaagtactcgctatgctggctgacctccatttttttaatctgc 126 Query: 342 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggtg 401 |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| Sbjct: 125 ttacgcagactggcaccataacgggtaccatacttcccaacgattccagccttcttggtc 66 Query: 402 cgcttcgtcatc 413 | ||| |||||| Sbjct: 65 ctcttagtcatc 54
>emb|Z24739.1|BRRBPL37A B.rapa ribosomal protein L37a mRNA, complete CDS Length = 461 Score = 145 bits (73), Expect = 1e-31 Identities = 186/224 (83%) Strand = Plus / Minus Query: 174 ctgacggtgaccgcactagccgtgttcatggtataggcaccaccagccttgaccttccca 233 ||||||||||| ||||| || ||||||||||| || |||||||||||||||||||| ||| Sbjct: 272 ctgacggtgacggcactggcggtgttcatggtgtatgcaccaccagccttgaccttgcca 213 Query: 234 cagtccttgcatccccaaattccaacagctttcctcttcacagcaaacttcccgcagaat 293 || |||||||||||||| || ||||| || || |||||||| | |||| |||||||| Sbjct: 212 caatccttgcatccccagataccaactgcctttctcttcactccgtacttgccgcagaac 153 Query: 294 tcacagaagtacttggagtgctgagacacctncatcttcttgatctgcttacgcagactg 353 ||||||||||||||| |||||| |||| ||||||||| |||||||| | | ||| Sbjct: 152 tcacagaagtacttgctgtgctggctgacctccatcttcttaatctgcttcctgatactc 93 Query: 354 gcaccatacctggttccatacttcccgacgattccagccttctt 397 || ||||| | ||||| ||||| |||||||||||| ||||||| Sbjct: 92 gctccatatcgagttccgtacttgccgacgattccaaccttctt 49
>gb|L21897.1|BRRRPL37A Brassica rapa ribosomal protein L37A (RPL37A) mRNA, complete cds Length = 446 Score = 145 bits (73), Expect = 1e-31 Identities = 186/224 (83%) Strand = Plus / Minus Query: 174 ctgacggtgaccgcactagccgtgttcatggtataggcaccaccagccttgaccttccca 233 ||||||||||| ||||| || ||||||||||| || |||||||||||||||||||| ||| Sbjct: 272 ctgacggtgacggcactggcggtgttcatggtgtatgcaccaccagccttgaccttgcca 213 Query: 234 cagtccttgcatccccaaattccaacagctttcctcttcacagcaaacttcccgcagaat 293 || |||||||||||||| || ||||| || || |||||||| | |||| |||||||| Sbjct: 212 caatccttgcatccccagataccaactgcctttctcttcactccgtacttgccgcagaac 153 Query: 294 tcacagaagtacttggagtgctgagacacctncatcttcttgatctgcttacgcagactg 353 ||||||||||||||| |||||| |||| ||||||||| |||||||| | | ||| Sbjct: 152 tcacagaagtacttgctgtgctggctgacctccatcttcttaatctgcttcctgatactc 93 Query: 354 gcaccatacctggttccatacttcccgacgattccagccttctt 397 || ||||| | ||||| ||||| |||||||||||| ||||||| Sbjct: 92 gctccatatcgagttccgtacttgccgacgattccaaccttctt 49
>emb|AJ131732.1|PME131732 Pseudotsuga menziesii mRNA for ribosomal protein L37A Length = 607 Score = 139 bits (70), Expect = 8e-30 Identities = 174/209 (83%) Strand = Plus / Minus Query: 204 gtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagct 263 |||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 375 gtataggcaccacctgccttcaccttcccacaatccttgcatccccaaatcccaactgct 316 Query: 264 ttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacc 323 || || ||||| |||||||| || ||||||||||| || ||||||| |||||| ||| Sbjct: 315 tttcttttcactgcaaacttgccacagaattcacaaaaaaacttggaatgctgactcact 256 Query: 324 tncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacg 383 | ||| || || ||||| || | | |||||||||||||||||| ||||| || || || Sbjct: 255 tccatttttttaatctgttttcttaaactggcaccatacctggtaccatatttgccaaca 196 Query: 384 attccagccttcttggtgcgcttcgtcat 412 || ||||||||||| || ||||| ||||| Sbjct: 195 ataccagccttcttagtacgctttgtcat 167
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 137 bits (69), Expect = 3e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 77277 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 77218 Query: 258 acagctttcctcttcacagcaaact 282 || |||||||||||||||||||||| Sbjct: 77217 actgctttcctcttcacagcaaact 77193 Score = 113 bits (57), Expect = 5e-22 Identities = 74/80 (92%) Strand = Plus / Minus Query: 288 cagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgcttacgc 347 ||||| || |||||||||||||||||||| || |||| |||||||||||||||||||||| Sbjct: 76688 cagaactcgcagaagtacttggagtgctgggaaacctccatcttcttgatctgcttacgc 76629 Query: 348 agactggcaccatacctggt 367 | |||||||||||||||||| Sbjct: 76628 aaactggcaccatacctggt 76609 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 132 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 190 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 77414 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcact 77356 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 acgattccagccttcttggtgcgcttcgtc 410 |||||||| ||||||||||||||||||||| Sbjct: 76497 acgattcctgccttcttggtgcgcttcgtc 76468
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 137 bits (69), Expect = 3e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 27481147 ttcatggtgtaggcaccaccagccttgaccttgccacagtccttgcatccccagattcca 27481088 Query: 258 acagctttcctcttcacagcaaact 282 || |||||||||||||||||||||| Sbjct: 27481087 actgctttcctcttcacagcaaact 27481063 Score = 113 bits (57), Expect = 5e-22 Identities = 74/80 (92%) Strand = Plus / Minus Query: 288 cagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgcttacgc 347 ||||| || |||||||||||||||||||| || |||| |||||||||||||||||||||| Sbjct: 27480558 cagaactcgcagaagtacttggagtgctgggaaacctccatcttcttgatctgcttacgc 27480499 Query: 348 agactggcaccatacctggt 367 | |||||||||||||||||| Sbjct: 27480498 aaactggcaccatacctggt 27480479 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 132 gatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcact 190 ||||| ||||| ||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 27481284 gatcaggcttctgtctgctccctcaggcgacggattgtgcttctgaccgtgaccgcact 27481226 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 381 acgattccagccttcttggtgcgcttcgtc 410 |||||||| ||||||||||||||||||||| Sbjct: 27480367 acgattcctgccttcttggtgcgcttcgtc 27480338
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 129 bits (65), Expect = 8e-27 Identities = 169/204 (82%) Strand = Plus / Minus Query: 164 gatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcctt 223 |||||| ||||| || || || |||||||| || ||||| || |||||||| |||||||| Sbjct: 39659 gatggtactcctaacagttacagcactagcagtattcatcgtgtaggcacctccagcctt 39600 Query: 224 gaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaactt 283 || |||||||||||||| |||||||||||||||||||| |||| || |||||| |||| Sbjct: 39599 aactttcccacagtccttacatccccaaattccaacagccttccgtttaacagcatactt 39540 Query: 284 cccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgctt 343 || ||||| | |||||||| ||| ||||||| ||| | |||||||||||| ||||| Sbjct: 39539 gccacagaactagcagaagtatttgctgtgctgactcacttccatcttcttgatttgctt 39480 Query: 344 acgcagactggcaccatacctggt 367 | |||||||||||||| ||||| Sbjct: 39479 cctaagactggcaccatatctggt 39456
>ref|NM_111932.1| Arabidopsis thaliana structural constituent of ribosome AT3G10950 mRNA, complete cds Length = 279 Score = 123 bits (62), Expect = 5e-25 Identities = 208/257 (80%) Strand = Plus / Minus Query: 141 tcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttc 200 ||||| ||||| ||||| || | |||||| ||||| || || || ||||||||||||||| Sbjct: 272 tcggtttgctctctcaaccgcctgatggtactcctaacagtcacagcactagccgtgttc 213 Query: 201 atggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaaca 260 || || || ||||| || || || || ||||| || || ||||| |||||||| |||||| Sbjct: 212 attgtgtatgcaccgcctgctttcactttcccgcaatctttgcacccccaaatgccaaca 153 Query: 261 gctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagac 320 |||||||||| || | |||| |||||||| ||||||||||||||| ||| ||| | Sbjct: 152 actttcctcttaacggagtactttccgcagaactcacagaagtacttgttgtgttgactc 93 Query: 321 acctncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccg 380 || | |||||||||||||||||| | |||||||||||||| | || ||||| || ||| Sbjct: 92 acttccatcttcttgatctgcttcctaagactggcaccatatcgtgtaccatattttccg 33 Query: 381 acgattccagccttctt 397 || |||| ||||||||| Sbjct: 32 acaattctagccttctt 16
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 2e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 281 cttcccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctg 340 |||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||| || Sbjct: 27960220 cttcccacagaactcacagaagtacttggagtgctgagaaacctccatcttcttgatttg 27960279 Query: 341 cttacgcagactggcaccatacct 364 |||||||| ||||||||||||||| Sbjct: 27960280 cttacgcaaactggcaccatacct 27960303 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 27959342 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 27959401 Query: 258 acagctttcctcttcacagcaaact 282 || |||||||||||||| ||||||| Sbjct: 27959402 actgctttcctcttcacggcaaact 27959426 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 27959179 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 27959238 Query: 185 cgcactagc 193 ||||||||| Sbjct: 27959239 cgcactagc 27959247 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 384 attccagccttcttggtgcgcttcgtc 410 ||||||||||||||||||||||||||| Sbjct: 27960402 attccagccttcttggtgcgcttcgtc 27960428
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 121 bits (61), Expect = 2e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 281 cttcccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctg 340 |||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||| || Sbjct: 146901 cttcccacagaactcacagaagtacttggagtgctgagaaacctccatcttcttgatttg 146960 Query: 341 cttacgcagactggcaccatacct 364 |||||||| ||||||||||||||| Sbjct: 146961 cttacgcaaactggcaccatacct 146984 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 198 ttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattcca 257 |||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct: 146023 ttcatggtgtaagcaccaccggccttcaccttcccacagtccttgcatccccagattcca 146082 Query: 258 acagctttcctcttcacagcaaact 282 || |||||||||||||| ||||||| Sbjct: 146083 actgctttcctcttcacggcaaact 146107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 125 gtagtgcgatcaagcttcggtctgctccctcaaacggcggatggtgctcctgacggtgac 184 ||||||| |||| ||||| ||||||||||||| ||| ||||| ||||||||||| ||||| Sbjct: 145860 gtagtgcaatcaggcttcagtctgctccctcagacgacggattgtgctcctgacagtgac 145919 Query: 185 cgcactagc 193 ||||||||| Sbjct: 145920 cgcactagc 145928 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 384 attccagccttcttggtgcgcttcgtc 410 ||||||||||||||||||||||||||| Sbjct: 147083 attccagccttcttggtgcgcttcgtc 147109
>ref|NM_115888.2| Arabidopsis thaliana structural constituent of ribosome AT3G60245 mRNA, complete cds Length = 592 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 325 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 266 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 265 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 206 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 205 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 146 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 145 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 86 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 85 ttccaaccttctt 73
>gb|AY117196.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 310 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 268 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 209 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 208 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 149 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 148 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 89 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 88 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 29 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 28 ttccaaccttctt 16
>gb|AY080669.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 462 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 317 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 258 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 257 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 198 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 197 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 138 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 137 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 78 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 77 ttccaaccttctt 65
>emb|BX825839.1|CNS0A7IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 313 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 254 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 253 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 194 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 193 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 134 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 133 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 74 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 73 ttccaaccttctt 61
>emb|BX825643.1|CNS0A7I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 472 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 308 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 249 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 248 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 189 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 188 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 129 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 128 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 69 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 68 ttccaaccttctt 56
>gb|AY088178.1| Arabidopsis thaliana clone 42545 mRNA, complete sequence Length = 466 Score = 115 bits (58), Expect = 1e-22 Identities = 204/253 (80%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 325 tctgctccctcaaccttctgatcgtgcttctaacagtgaccgcactggcggtgttcattg 266 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | Sbjct: 265 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagcct 206 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| ||||||||||||||| |||||| |||| Sbjct: 205 ttcgcttcactccgtacttgccacagaactcacagaagtacttgctgtgctggctgacct 146 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 145 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 86 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 85 ttccaaccttctt 73
>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full insert sequence Length = 1791 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 338 ctgcttacgcagactggcaccatacctggttccatacttcccgacgattccagccttctt 397 ||||||||||| |||||||||||||||||| ||||| || || |||||||| |||||||| Sbjct: 159 ctgcttacgcaaactggcaccatacctggtaccatatttgccaacgattcctgccttctt 100 Query: 398 ggtgcgcttcgtcatct 414 ||||||||||||||||| Sbjct: 99 ggtgcgcttcgtcatct 83
>emb|BX822513.1|CNS0A7MD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 437 Score = 99.6 bits (50), Expect = 7e-18 Identities = 202/253 (79%) Strand = Plus / Minus Query: 145 tctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttcatgg 204 ||||||||||||| | | ||| ||||| || || ||||||||||| || |||||||| | Sbjct: 308 tctgctccctcaaccttctgatcgtgcttcttacagtgaccgcactggcggtgttcattg 249 Query: 205 tataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagctt 264 | || |||||||| ||||||||||| ||||| |||||||| ||||| || || ||||| | Sbjct: 248 tgtaagcaccacctgccttgaccttgccacaatccttgcaaccccagatacctacagcct 189 Query: 265 tcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgctgagacacct 324 | | |||||| | |||| || ||||| |||||||||| |||| |||||| |||| Sbjct: 188 ttcgcttcactccgtacttgccacagaactcacagaagttcttgctgtgctggctgacct 129 Query: 325 ncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacga 384 ||||||||| |||||||| | | ||| |||||||| | ||||| || || ||||||| Sbjct: 128 ccatcttcttaatctgcttcctgatactcgcaccataacgtgttccgtatttgccgacga 69 Query: 385 ttccagccttctt 397 ||||| ||||||| Sbjct: 68 ttccaaccttctt 56
>gb|AF127042.1|AF127042 Gossypium hirsutum 60S ribosomal protein L37a (RL37a) mRNA, complete cds Length = 619 Score = 95.6 bits (48), Expect = 1e-16 Identities = 164/203 (80%) Strand = Plus / Minus Query: 195 gtgttcatggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaatt 254 ||||||| ||||| ||||||||||| || || ||||| || ||||||| ||||| ||| Sbjct: 252 gtgttcaaagtataagcaccaccagctttaactttcccgcaagccttgcagccccagatt 193 Query: 255 ccaacagctttcctcttcacagcaaacttcccgcagaattcacagaagtacttggagtgc 314 || ||||| || |||||||| ||| |||| || ||||| || |||||||||||| ||| Sbjct: 192 cctacagcctttctcttcactgcatactttccacagaactcgcagaagtacttgctgtgt 133 Query: 315 tgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttccatac 374 ||| ||||| ||||||||| || ||||| | || |||||||||||| | ||| ||||| Sbjct: 132 tgactcacctccatcttcttaatttgcttcctcaaactggcaccataacgggtaccatat 73 Query: 375 ttcccgacgattccagccttctt 397 || || || ||||| |||||||| Sbjct: 72 tttccaacaattccggccttctt 50
>gb|AF363029.3|AF363029 Branchiostoma belcheri 60S ribosomal protein L37A mRNA, complete cds Length = 447 Score = 87.7 bits (44), Expect = 3e-14 Identities = 76/87 (87%) Strand = Plus / Minus Query: 302 gtacttggagtgctgagacacctncatcttcttgatctgcttacgcagactggcaccata 361 ||||||||||||||||||||||| |||||||||||| |||||||||| ||| ||||| Sbjct: 122 gtacttggagtgctgagacacctccatcttcttgatggtcttacgcagagaggcgccata 63 Query: 362 cctggttccatacttcccgacgattcc 388 | ||| || ||||||||||||||||| Sbjct: 62 acgggtgccgtacttcccgacgattcc 36
>gb|AY168770.1| Branchiostoma belcheri tsingtaunese ribosomal protein L37A mRNA, complete cds Length = 477 Score = 87.7 bits (44), Expect = 3e-14 Identities = 76/87 (87%) Strand = Plus / Minus Query: 302 gtacttggagtgctgagacacctncatcttcttgatctgcttacgcagactggcaccata 361 ||||||||||||||||||||||| |||||||||||| |||||||||| ||| ||||| Sbjct: 135 gtacttggagtgctgagacacctccatcttcttgatggtcttacgcagagaggcgccata 76 Query: 362 cctggttccatacttcccgacgattcc 388 | ||| || ||||||||||||||||| Sbjct: 75 acgggtgccgtacttcccgacgattcc 49
>gb|AY310764.1| Nicotiana benthamiana clone 6-280 unknown mRNA Length = 402 Score = 79.8 bits (40), Expect = 6e-12 Identities = 189/239 (79%) Strand = Plus / Minus Query: 162 cggatggtgctcctgacggtgaccgcactagccgtgttcatggtataggcaccaccagcc 221 ||||| |||||||| || || || ||||| || ||||||| ||||| ||||| || || Sbjct: 250 cggattgtgctcctaactgtcacagcacttgcagtgttcaatgtataagcaccgcctgct 191 Query: 222 ttgaccttcccacagtccttgcatccccaaattccaacagctttcctcttcacagcaaac 281 ||||| || || || || ||||| |||||||| || || ||||| |||||||| || || Sbjct: 190 ttgactttgccgcaatctttgcagccccaaatccccactgcttttctcttcactgcgtac 131 Query: 282 ttcccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgc 341 || || || || ||||| || |||||| ||||| |||| ||| ||||| |||||| Sbjct: 130 tttccacaaaactcacaaaaatacttgctatgctggctaacctccattttcttaatctgc 71 Query: 342 ttacgcagactggcaccatacctggttccatacttcccgacgattccagccttcttggt 400 || |||| |||||||||||| | ||| ||||| ||||| || ||||||||||||||||| Sbjct: 70 tttcgcaaactggcaccataacgggtaccatatttcccaactattccagccttcttggt 12
>emb|BX826117.1|CNS0A7I3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 435 Score = 71.9 bits (36), Expect = 2e-09 Identities = 170/215 (79%) Strand = Plus / Minus Query: 183 accgcactagccgtgttcatggtataggcaccaccagccttgaccttcccacagtccttg 242 |||||||| || |||||||| || || ||||| || ||||||||||| ||||| |||||| Sbjct: 278 accgcactggcggtgttcattgtgtaagcaccccctgccttgaccttgccacaatccttg 219 Query: 243 catccccaaattccaacagctttcctcttcacagcaaacttcccgcagaattcacagaag 302 || ||||| || |||||||| || | ||| || | |||| || ||||| | ||||||| Sbjct: 218 caaccccagataccaacagcctttcgctttactccgtacttgccacagaactaacagaag 159 Query: 303 tacttggagtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatac 362 |||||| |||||| |||| ||||||||| |||||||| | | ||| |||||| | Sbjct: 158 tacttgctgtgctggctgacctccatcttcttaatctgctttctgaaactcgcaccaaaa 99 Query: 363 ctggttccatacttcccgacgattccagccttctt 397 | ||||| || || |||||||||||| ||||||| Sbjct: 98 cgtgttccgtatttgccgacgattccaaccttctt 64
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 69.9 bits (35), Expect = 6e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 141 tcggtctgctccctcaaacggcggatggtgctcctgacggtgaccgcactagccgtgttc 200 ||||| ||||| ||||| || | |||||| ||||| || || || ||||||||||||||| Sbjct: 91556 tcggtttgctctctcaaccgcctgatggtactcctaacagtcacagcactagccgtgttc 91615 Query: 201 atggtataggcaccaccagccttgaccttcccacagtccttgcatccccaaattccaaca 260 || || || ||||| || || || || ||||| || || ||||| |||||||| |||||| Sbjct: 91616 attgtgtatgcaccgcctgctttcactttcccgcaatctttgcacccccaaatgccaaca 91675 Query: 261 gctttcctctt 271 |||||||||| Sbjct: 91676 actttcctctt 91686 Score = 67.9 bits (34), Expect = 2e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 285 ccgcagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgctta 344 |||||||| ||||||||||||||| ||| ||| ||| | |||||||||||||||||| Sbjct: 91815 ccgcagaactcacagaagtacttgttgtgttgactcacttccatcttcttgatctgcttc 91874 Query: 345 cgcagactggcaccata 361 | |||||||||||||| Sbjct: 91875 ctaagactggcaccata 91891
>gb|AY310766.1| Nicotiana benthamiana clone 7-083 unknown mRNA Length = 195 Score = 65.9 bits (33), Expect = 1e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 321 acctncatcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccg 380 |||| ||| ||||| |||||||| |||| |||||||||||| | ||| ||||| ||||| Sbjct: 118 acctccattttcttaatctgctttcgcaaactggcaccataacgggtaccatatttccca 59 Query: 381 acgattccagccttcttggt 400 || ||||||||||| ||||| Sbjct: 58 actattccagccttgttggt 39
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 210 gcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagc 262 |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| Sbjct: 44578 gcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagc 44526 Score = 42.1 bits (21), Expect = 1.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 288 cagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgctt 343 ||||| ||||||||||||||| |||||| |||| ||||||||| |||||||| Sbjct: 44402 cagaactcacagaagtacttgctgtgctggctgacctccatcttcttaatctgctt 44347
>ref|NM_164628.1| Drosophila melanogaster Ribosomal protein L37A CG5827-RB, transcript variant B (RpL37A), mRNA Length = 696 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 204 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 145 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 144 tccaaccttcttggtgcgctt 124
>ref|NM_080042.2| Drosophila melanogaster Ribosomal protein L37A CG5827-RA, transcript variant A (RpL37A), mRNA Length = 659 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 167 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 108 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 107 tccaaccttcttggtgcgctt 87
>gb|AY071725.1| Drosophila melanogaster RH41593 full length cDNA Length = 524 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 167 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 108 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 107 tccaaccttcttggtgcgctt 87
>gb|AY071189.1| Drosophila melanogaster RE23595 full length cDNA Length = 519 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 166 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 107 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 106 tccaaccttcttggtgcgctt 86
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 127613 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 127554 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 127553 tccaaccttcttggtgcgctt 127533
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G) gene, complete cds Length = 10989 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 210 gcaccaccagccttgaccttcccacagtccttgcatccccaaattccaacagc 262 |||||||| ||||||||||| ||||| |||||||| ||||| || |||||||| Sbjct: 7467 gcaccacctgccttgaccttgccacaatccttgcaaccccagataccaacagc 7415 Score = 42.1 bits (21), Expect = 1.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 288 cagaattcacagaagtacttggagtgctgagacacctncatcttcttgatctgctt 343 ||||| ||||||||||||||| |||||| |||| ||||||||| |||||||| Sbjct: 7291 cagaactcacagaagtacttgctgtgctggctgacctccatcttcttaatctgctt 7236
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 326 catcttcttgatctgcttacgcagactggcaccatacctggttccatacttcccgacgat 385 ||||||||||| | ||||||||| ||||||||| | ||| ||||| || || ||||| Sbjct: 129886 catcttcttgaccatcttacgcagggaggcaccataacgggtaccatatttaccaacgat 129827 Query: 386 tccagccttcttggtgcgctt 406 |||| |||||||||||||||| Sbjct: 129826 tccaaccttcttggtgcgctt 129806
>gb|DQ445521.1| Graphocephala atropunctata isolate WHGA0587 ribosomal protein L37Ae-like protein mRNA, complete cds Length = 279 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||||||||| ||| ||||||| ||||||||||||| Sbjct: 59 gcaccataacgggttccatactttccggtgattccaaccttcttggtgcg 10
>ref|XM_675471.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7294.2), mRNA Length = 2133 Score = 46.1 bits (23), Expect = 0.090 Identities = 82/102 (80%) Strand = Plus / Minus Query: 311 gtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttcc 370 |||||| ||||| | ||||||||| | |||||||||||| |||||| || ||||| || Sbjct: 102 gtgctgggacacttccatcttcttcacctgcttacgcagggaggcaccgtatctggtacc 43 Query: 371 atacttcccgacgattccagccttcttggtgcgcttcgtcat 412 ||| || ||| ||| || ||||||| |||||||| ||||| Sbjct: 42 atatttaccggtgataccgaccttcttagtgcgcttggtcat 1
>ref|XM_675035.1| Plasmodium berghei strain ANKA hypothetical protein (PB001065.02.0) partial mRNA Length = 1821 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 cctaaaatcagaagacaaaatta 32 ||||||||||||||||||||||| Sbjct: 1479 cctaaaatcagaagacaaaatta 1501
>dbj|AK168182.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730064F20 product:ribosomal protein L37a, full insert sequence Length = 362 Score = 46.1 bits (23), Expect = 0.090 Identities = 44/51 (86%) Strand = Plus / Minus Query: 353 ggcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 ||||||||||| ||| || ||||| |||||||| || ||||||||||||| Sbjct: 92 ggcaccataccgggtcccgtacttgccgacgatgccgaccttcttggtgcg 42
>ref|XM_977209.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC669803), mRNA Length = 394 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>ref|XM_906777.2| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC632599), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>ref|XM_001004924.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L37a (LOC668941), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 81 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 32
>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence Length = 181676 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 118095 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 118046
>gb|DQ066199.1| Ixodes scapularis isolate ISUFL72 ribosomal protein L37A mRNA, complete cds Length = 279 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Minus Query: 353 ggcaccatacctggttccatacttcccgacgattccagccttcttggtgcgctt 406 ||||||||||||||| || |||||||| ||||| || ||||||| || ||||| Sbjct: 60 ggcaccatacctggtgccgtacttccccacgatcccgaccttcttcgtacgctt 7
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 tgctgagacacctncatcttcttga 336 ||||||||||||| ||||||||||| Sbjct: 29190642 tgctgagacaccttcatcttcttga 29190666
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 44.1 bits (22), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 tgctgagacacctncatcttcttga 336 ||||||||||||| ||||||||||| Sbjct: 57929 tgctgagacaccttcatcttcttga 57953
>dbj|AK102136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H14, full insert sequence Length = 2244 Score = 44.1 bits (22), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 tgctgagacacctncatcttcttga 336 ||||||||||||| ||||||||||| Sbjct: 1061 tgctgagacaccttcatcttcttga 1037
>dbj|AK073179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004F21, full insert sequence Length = 2507 Score = 44.1 bits (22), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 tgctgagacacctncatcttcttga 336 ||||||||||||| ||||||||||| Sbjct: 1392 tgctgagacaccttcatcttcttga 1368
>dbj|AK061641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B03, full insert sequence Length = 1571 Score = 44.1 bits (22), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 tgctgagacacctncatcttcttga 336 ||||||||||||| ||||||||||| Sbjct: 458 tgctgagacaccttcatcttcttga 434
>emb|AL928935.14| Mouse DNA sequence from clone RP24-114E18 on chromosome 2, complete sequence Length = 123074 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttcttggtgcg 403 |||||||| | |||||| ||||| |||||||| || ||||||||||||| Sbjct: 66832 gcaccatagcgggttccgtacttgccgacgatgccgaccttcttggtgcg 66881
>ref|XM_720393.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05085) partial mRNA Length = 5438 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cctaaaatcagaagacaaaat 30 ||||||||||||||||||||| Sbjct: 3179 cctaaaatcagaagacaaaat 3199
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 60 aaaatacagatatttgaagtctttaattccact 92 |||||||||| ||||||| ||||||||||||| Sbjct: 1371153 aaaatacagaaatttgaaccctttaattccact 1371185
>emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in linkage group 25, complete sequence Length = 87559 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ctgaatagccaaaatacagat 70 ||||||||||||||||||||| Sbjct: 29992 ctgaatagccaaaatacagat 30012
>dbj|AB226168.1| Aspergillus oryzae cDNA, contig sequence: AoEST3026 Length = 520 Score = 42.1 bits (21), Expect = 1.4 Identities = 83/104 (79%) Strand = Plus / Minus Query: 311 gtgctgagacacctncatcttcttgatctgcttacgcagactggcaccatacctggttcc 370 |||||| ||||| | ||||||||| | |||||||||||| |||||| || ||||| || Sbjct: 167 gtgctgggacacttccatcttcttcacctgcttacgcagggaggcaccgtatctggtacc 108 Query: 371 atacttcccgacgattccagccttcttggtgcgcttcgtcatct 414 ||| || || ||| || ||||||| |||||||| ||||||| Sbjct: 107 atatttacccgtgataccgaccttcttagtgcgcttggtcatct 64
>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10 Length = 83122 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 agcatcctaaaatcagaagacaaaa 29 |||||||||||||||| |||||||| Sbjct: 50204 agcatcctaaaatcagtagacaaaa 50180
>gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190177 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 acttggagtgctgagacacc 323 |||||||||||||||||||| Sbjct: 8177 acttggagtgctgagacacc 8158
>ref|XM_598735.2| PREDICTED: Bos taurus similar to zinc finger protein 333 (LOC520490), partial mRNA Length = 1119 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccttcccacagtccttgcat 245 |||||||||||||||||||| Sbjct: 472 ccttcccacagtccttgcat 453
>gb|AC112406.5| Rattus norvegicus 11 BAC CH230-329D3 (Children's Hospital Oakland Research Institute) complete sequence Length = 182245 Score = 40.1 bits (20), Expect = 5.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 365 ggttccatacttcccgacgattccagccttcttggtgcgcttcgtcat 412 ||||||||| ||||||||||| || | ||||||||||| || ||||| Sbjct: 132455 ggttccatatttcccgacgatcccgactttcttggtgcgtttagtcat 132502
>emb|AL117373.14|HS1188A21 Human DNA sequence from clone RP5-1188A21 on chromosome 6q22.32-22.3, complete sequence Length = 78603 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aaatacagatatttgaagtc 80 |||||||||||||||||||| Sbjct: 23378 aaatacagatatttgaagtc 23397
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cagatatttgaagtctttaa 85 |||||||||||||||||||| Sbjct: 98111 cagatatttgaagtctttaa 98092
>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence Length = 168906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 aaaatcagaagacaaaattactaa 36 ||||||||||||||||| |||||| Sbjct: 135917 aaaatcagaagacaaaagtactaa 135940
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 5.6 Identities = 34/39 (87%) Strand = Plus / Minus Query: 311 gtgctgagacacctncatcttcttgatctgcttacgcag 349 |||||| ||||| | ||||||||| | |||||||||||| Sbjct: 334935 gtgctgggacacttccatcttcttcacctgcttacgcag 334897
>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa Length = 225033 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cagatatttgaagtctttaa 85 |||||||||||||||||||| Sbjct: 162123 cagatatttgaagtctttaa 162104
>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence Length = 180765 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 aaaatcagaagacaaaattactaa 36 ||||||||||||||||| |||||| Sbjct: 40656 aaaatcagaagacaaaagtactaa 40679
>gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, complete sequence Length = 170510 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 taaaatcagaagacaaaattacta 35 ||||||||||| |||||||||||| Sbjct: 22900 taaaatcagaacacaaaattacta 22877
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold Length = 501879 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaagcatcctaaaatcagaa 22 |||||||||||||||||||| Sbjct: 443861 aaagcatcctaaaatcagaa 443880
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 taaaatcagaagacaaaatt 31 |||||||||||||||||||| Sbjct: 96526 taaaatcagaagacaaaatt 96507
>ref|NM_064556.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-43) (rpl-43) mRNA, complete cds Length = 410 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttctt 397 |||||||| | |||||| ||||| ||||||||||| ||||||| Sbjct: 77 gcaccataacgggttccgtactttccgacgattccgaccttctt 34
>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown, complete sequence Length = 200678 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 aaatacagatatttgaagtc 80 |||||||||||||||||||| Sbjct: 141128 aaatacagatatttgaagtc 141109
>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown, complete sequence Length = 154069 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aaatacagatatttgaagtc 80 |||||||||||||||||||| Sbjct: 17829 aaatacagatatttgaagtc 17848
>gb|AF155830.1|AF155830 Rhizobium leguminosarum bv. viciae putative uridylyltransferase/uridylyl-removing enzyme (glnD) gene, complete cds; and MviN (mviN) gene, partial cds Length = 4087 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tcttggtgcgcttcgtcatc 413 |||||||||||||||||||| Sbjct: 3833 tcttggtgcgcttcgtcatc 3852
>ref|XM_577778.1| PREDICTED: Rattus norvegicus similar to zinc finger protein 545 (LOC502314), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccttcccacagtccttgcat 245 |||||||||||||||||||| Sbjct: 1018 ccttcccacagtccttgcat 999
>emb|AL110490.1|CEY48B6A Caenorhabditis elegans YAC Y48B6A, complete sequence Length = 101295 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 354 gcaccatacctggttccatacttcccgacgattccagccttctt 397 |||||||| | |||||| ||||| ||||||||||| ||||||| Sbjct: 5004 gcaccataacgggttccgtactttccgacgattccgaccttctt 4961 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,529,845 Number of Sequences: 3902068 Number of extensions: 3529845 Number of successful extensions: 70336 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70174 Number of HSP's gapped (non-prelim): 149 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
