ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23i16 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 278 bits (712), Expect = 6e-75 Identities = 130/154 (84%), Positives = 142/154 (92%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TRDLFARPFRKKGYI L+TYLRT+KVG++VDVKVNGA+HKGMPHKFYHGRTGR+WNVTKR Sbjct: 11 TRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKR 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 A+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF RK ND+LKA AKA GE ISTKR Sbjct: 71 AVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKR 130 Query: 227 QPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 126 QP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 131 QPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 167 bits (422), Expect = 3e-41 Identities = 87/148 (58%), Positives = 108/148 (72%), Gaps = 3/148 (2%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR LFAR F+ G + L+TYL +K+GE+VDV N AVHKGMP K+YHGRTG VWNVTKR Sbjct: 11 TRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKR 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK-ARGEVISTK 231 AIGVEINK+V +RIIKKRIHVR++HV+ S C + FL+R NDK+K +A A+ V STK Sbjct: 71 AIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTK 130 Query: 230 RQPAGPKPGFMV--EGTTIETVTPIPYD 153 R P PK G ++ +G ET IPY+ Sbjct: 131 RLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 166 bits (421), Expect = 4e-41 Identities = 78/147 (53%), Positives = 109/147 (74%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK Sbjct: 11 TRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKS 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAKA+G + KR Sbjct: 71 SVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKR 130 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 QPA P+ +V EG +T+ P+PY+ Sbjct: 131 QPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 165 bits (418), Expect = 8e-41 Identities = 77/147 (52%), Positives = 109/147 (74%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK Sbjct: 11 TRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKS 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAKA+G + KR Sbjct: 71 SVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKR 130 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 QPA P+ +V EG +T+ P+PY+ Sbjct: 131 QPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 159 bits (402), Expect = 6e-39 Identities = 78/147 (53%), Positives = 105/147 (71%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQS 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAKA+G+ + +R Sbjct: 71 SVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRR 130 Query: 227 QPAGPKPGFMVEGTTIETVT--PIPYD 153 QPA P V E VT P+ YD Sbjct: 131 QPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 159 bits (402), Expect = 6e-39 Identities = 78/147 (53%), Positives = 105/147 (71%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQS 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAKA+G+ + +R Sbjct: 71 SVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRR 130 Query: 227 QPAGPKPGFMVEGTTIETVT--PIPYD 153 QPA P V E VT P+ YD Sbjct: 131 QPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 157 bits (396), Expect = 3e-38 Identities = 75/147 (51%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KR Sbjct: 70 AVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 QPA P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 155 bits (393), Expect = 6e-38 Identities = 74/147 (50%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F+RP+RK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KR Sbjct: 70 AVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 QPA P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 152 bits (383), Expect = 9e-37 Identities = 73/147 (49%), Positives = 100/147 (68%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + Sbjct: 70 AVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNG 129 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 QPA P+ V G E + PIPY+ Sbjct: 130 QPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 151 bits (382), Expect = 1e-36 Identities = 73/147 (49%), Positives = 100/147 (68%), Gaps = 2/147 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQH 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKR 228 A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KR Sbjct: 70 AVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKR 129 Query: 227 QPAGPKPGFMV--EGTTIETVTPIPYD 153 A P+ V G E + PIPY+ Sbjct: 130 HAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 138 bits (348), Expect = 1e-32 Identities = 68/150 (45%), Positives = 100/150 (66%), Gaps = 3/150 (2%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++NVT+ Sbjct: 10 TRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRG 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGE-VISTK 231 A+G+ +NK+V I+ KRI++R+EH++PS+C +FL R +ND+ + AK+ G+ V + K Sbjct: 70 AVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALK 129 Query: 230 RQPAGPKPGFMV--EGTTIETVTPIPYDVV 147 R P P+ V + E + P+ +++V Sbjct: 130 RLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 137 bits (346), Expect = 2e-32 Identities = 66/144 (45%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Frame = -3 Query: 581 DLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAI 402 D+F++ FR++G I L YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+ Sbjct: 11 DMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAV 70 Query: 401 GVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQP 222 G+ +NKQV RII KRI+VR+EH++ S+ F+QR N++ + EA+ + ++ KRQP Sbjct: 71 GIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQP 130 Query: 221 AGPKPGFMVEGTT-IETVTPIPYD 153 P+ G V + E V PIPY+ Sbjct: 131 QQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 133 bits (334), Expect = 4e-31 Identities = 67/154 (43%), Positives = 97/154 (62%), Gaps = 9/154 (5%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR LF RPFR G +T L TYKVG++V + N ++ G+P+K +HG+TGRVWNV Sbjct: 11 TRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPH 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKL-------NNDKLKAEAKARG 249 AIGV +NK+V NRI+ KR+H+ EH++PS C ++FL+RK N +LK E K Sbjct: 71 AIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL- 129 Query: 248 EVISTKRQPAGPKPGFMVEGTTIE--TVTPIPYD 153 + KR P P+P +++G I+ TV P+ ++ Sbjct: 130 LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 115 bits (287), Expect = 1e-25 Identities = 57/127 (44%), Positives = 90/127 (70%), Gaps = 1/127 (0%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R Sbjct: 10 TRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPR 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVIS-TK 231 ++ V + K+V + + K+I VR+EHV+ SRC+EE +R L ++ +A++RG V++ +K Sbjct: 70 SLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSK 129 Query: 230 RQPAGPK 210 R+ GP+ Sbjct: 130 RKIEGPR 136
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 72.0 bits (175), Expect = 1e-12 Identities = 31/52 (59%), Positives = 39/52 (75%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTG 432 TR +F+RPFRK G + L TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 10 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 63.9 bits (154), Expect = 3e-10 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 411 TR L + R+KG I L+ + Y GE+V VK+N ++HKGMPH+ YHG+ G V V K Sbjct: 12 TRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGK 69 Query: 410 RAIGVEINKQVGNRIIKKRIHVRVEHVQP 324 R E+ +G++ ++ + VR EH+ P Sbjct: 70 RGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 57.0 bits (136), Expect = 4e-08 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Frame = -3 Query: 587 TRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHK-GMPHKFYHGRTGRVWNVT 414 TR L +P R+KG I L+TYLR Y+VG+ V + +N + GMPH+ +HG TG V V Sbjct: 12 TRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VG 69 Query: 413 KRAIGVEINKQVGNRIIKKRIHVRVEHVQP 324 KR E+ +G + +K + V H++P Sbjct: 70 KRGEAYEVEVYLGRK--RKTLFVPPVHLKP 97
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 56.2 bits (134), Expect = 7e-08 Identities = 32/89 (35%), Positives = 52/89 (58%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR ++ R++G +T LR +K GE+V + ++ +VHKGMPH +HGRTG V R Sbjct: 12 TRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGR 71 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPS 321 A V++ G + K+I +H++P+ Sbjct: 72 AFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 55.5 bits (132), Expect = 1e-07 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 411 TR L + R++G + L+ + +K G++V +K+N +VHKGMPH+ YHG+ G + K Sbjct: 12 TRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVIQG--K 69 Query: 410 RAIGVEINKQVGNRIIKKRIHVRVEHV 330 R + +G++ +K I VR EH+ Sbjct: 70 RGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 55.1 bits (131), Expect = 1e-07 Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 1/89 (1%) Frame = -3 Query: 587 TRDLFARPFRKKGYI-ALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 411 +R L + R++G + +L+ + YK G++V VK+N +VH+GMPH+ Y G+ G++ + K Sbjct: 12 SRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI--IGK 69 Query: 410 RAIGVEINKQVGNRIIKKRIHVRVEHVQP 324 R ++ +G++ +K I VR EH+ P Sbjct: 70 RGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 53.1 bits (126), Expect = 6e-07 Identities = 29/90 (32%), Positives = 49/90 (54%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + GN++ K + + H++P + Sbjct: 70 GDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 52.8 bits (125), Expect = 7e-07 Identities = 29/90 (32%), Positives = 49/90 (54%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + GN++ K + + H++P + Sbjct: 70 GDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 52.4 bits (124), Expect = 1e-06 Identities = 28/90 (31%), Positives = 51/90 (56%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + + G+++ K + + H++P + Sbjct: 70 GEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 51.6 bits (122), Expect = 2e-06 Identities = 31/88 (35%), Positives = 49/88 (55%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR + R++G L + ++ G+ V + ++ +VHKGMPH YHGRTG V R Sbjct: 12 TRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGR 71 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQP 324 A V+I G + +K++ V EH++P Sbjct: 72 AYIVKIRD--GGK--EKKLIVYPEHLKP 95
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 50.1 bits (118), Expect = 5e-06 Identities = 28/90 (31%), Positives = 48/90 (53%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR Sbjct: 12 TRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKR 69 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + G ++ K + H++P + Sbjct: 70 GDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/79 (36%), Positives = 46/79 (58%) Frame = -3 Query: 560 RKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 381 R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V RA V++ Sbjct: 21 REKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD- 78 Query: 380 VGNRIIKKRIHVRVEHVQP 324 G ++ K + VR EH++P Sbjct: 79 -GGKM--KTLIVRPEHLKP 94
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/81 (35%), Positives = 45/81 (55%) Frame = -3 Query: 560 RKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 381 R+KG LT L+ Y G+ V V ++ +V KGMPH +HG+TG V V +R + + Sbjct: 20 RQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVK 77 Query: 380 VGNRIIKKRIHVRVEHVQPSR 318 G + K I R +H++ S+ Sbjct: 78 DGGKY--KDIIARPQHLRESK 96
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 45.1 bits (105), Expect = 2e-04 Identities = 29/88 (32%), Positives = 45/88 (51%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V + R Sbjct: 12 TRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGR 71 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQP 324 A +E +G++ KK I EH++P Sbjct: 72 AYVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/71 (30%), Positives = 44/71 (61%) Frame = -3 Query: 539 LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIK 360 +T ++++ G+ V + ++ ++H+G PH +HG+TGRV + ++ V + GN+ Sbjct: 27 ITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--D 82 Query: 359 KRIHVRVEHVQ 327 K++ VR EH+Q Sbjct: 83 KQLVVRPEHLQ 93
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G V V KR Sbjct: 13 TRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGTV--VGKR 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQ 327 E+ + KK + V H++ Sbjct: 71 GNCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = -3 Query: 569 RPFRKKGYIALTTYLRTYKVGEHVDVKVNGAV 474 RPFRK G + L+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 40.0 bits (92), Expect = 0.005 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + + + Sbjct: 12 SRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVITGM--Q 69 Query: 407 AIGVEINKQVGN---RIIKKRIHVR 342 ++ +VGN ++I +H+R Sbjct: 70 GSCYILSFKVGNVEKKVIAAPVHLR 94
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 39.7 bits (91), Expect = 0.007 Identities = 22/90 (24%), Positives = 48/90 (53%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V R Sbjct: 11 TRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGR 70 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + +E+ GN + K + +H++P + Sbjct: 71 SYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 35.8 bits (81), Expect = 0.094 Identities = 21/90 (23%), Positives = 48/90 (53%) Frame = -3 Query: 587 TRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 408 TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V + +R Sbjct: 11 TRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQR 68 Query: 407 AIGVEINKQVGNRIIKKRIHVRVEHVQPSR 318 + + GN + K + +H++P + Sbjct: 69 GRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>PACC_KLULA (Q6CQ07) pH-response transcription factor pacC/RIM101| Length = 517 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 356 RIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKP 207 R+HV+++ S CN++F + + LK K E +S ++ GPKP Sbjct: 169 RVHVQLKPFACSTCNKKFKRPQ----DLKKHLKVHNEELSLLKKKRGPKP 214
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -3 Query: 560 RKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA--IGVEIN 387 RKK I ++ + G+ V + + +VH GMP+ + G TG V +GV++ Sbjct: 23 RKKSIIG--RMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIVEGAQGNCYKVGVKVG 80 Query: 386 KQVGNRIIKKRIHVR 342 + +I +H++ Sbjct: 81 -SLTKYVIASPVHLK 94
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -3 Query: 560 RKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 426 RK+ I +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 23 RKRSVIG--RFMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -3 Query: 374 NRIIKKRIHVRVEHVQPSRCNEEFLQR 294 NRI +RIH+ +H Q ++C E F +R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>TBB_BOMMO (P41385) Tubulin beta chain (Beta tubulin)| Length = 450 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = +3 Query: 135 LEIVDDIVR---DGCDCLNGGALHHEPGLG 215 LE V D+VR +GCDCL G L H G G Sbjct: 113 LETVLDVVRKEAEGCDCLQGFQLVHSLGGG 142
>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 222 WLPLCADDLTTGLGLRLQLVIVEFPLEELLIAPGWLHV 335 WLP+ +D+ + GLR L+ PL + WL V Sbjct: 223 WLPIMKEDIESSPGLRKALIYAYGPLRTWMSIAHWLKV 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,178,201 Number of Sequences: 219361 Number of extensions: 1186095 Number of successful extensions: 4237 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4235 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
