Clone Information

BLAST Search Result

Clone Name	rbags23i10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	142	5e-34
2	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	141	1e-33
3	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	138	1e-32
4	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	134	1e-31
5	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	133	3e-31
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	115	1e-25
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	115	1e-25
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	115	1e-25
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	115	1e-25
10	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	112	9e-25
11	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	107	2e-23
12	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	105	7e-23
13	CDC48_YEAST (P25694) Cell division control protein 48	74	3e-13
14	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	73	6e-13
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	46	8e-05
16	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	42	9e-04
17	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	39	0.013
18	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	38	0.017
19	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	37	0.049
20	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	36	0.064
21	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	36	0.064
22	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	36	0.084
23	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	36	0.084
24	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	36	0.084
25	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	35	0.11
26	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	35	0.11
27	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	35	0.19
28	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	34	0.24
29	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	34	0.32
30	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	33	0.41
31	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	33	0.41
32	SPAST_MOUSE (Q9QYY8) Spastin	33	0.54
33	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	33	0.54
34	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	33	0.54
35	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	33	0.54
36	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	33	0.54
37	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	33	0.54
38	SPAST_HUMAN (Q9UBP0) Spastin	33	0.54
39	SAV_SULAC (Q07590) SAV protein	33	0.54
40	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	33	0.71
41	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	33	0.71
42	VAT_THEAC (O05209) VCP-like ATPase	33	0.71
43	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	32	1.2
44	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	32	1.2
45	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	32	1.2
46	AFG2_YEAST (P32794) Protein AFG2	32	1.2
47	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	32	1.6
48	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	31	2.1
49	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	31	2.1
50	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	31	2.1
51	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	31	2.7
52	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	31	2.7
53	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	31	2.7
54	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	31	2.7
55	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	31	2.7
56	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	31	2.7
57	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	31	2.7
58	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	31	2.7
59	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	31	2.7
60	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	31	2.7
61	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	30	3.5
62	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	30	3.5
63	ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondr...	30	4.6
64	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	30	4.6
65	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	30	4.6
66	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	30	4.6
67	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	30	4.6
68	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	30	6.0
69	CDCH_HALSA (Q9HPF0) Protein cdcH	30	6.0
70	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	30	6.0
71	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	29	7.8
72	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	29	7.8
73	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	29	7.8
74	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	29	7.8
75	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	29	7.8
76	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	29	7.8

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  142 bits (359), Expect = 5e-34
 Identities = 75/111 (67%), Positives = 79/111 (71%)
 Frame = -3

Query: 557  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
            KD+DL ALAKYTQGFSGADITEICQR+CKYAI                +P          
Sbjct: 672  KDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEI 731

Query: 377  XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQP 225
               I+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD P
Sbjct: 732  AE-IKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAP 781



 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 396 EDVDLERVSKDTHGYVGADLAALCTEAALQCI 427

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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  141 bits (356), Expect = 1e-33
 Identities = 75/107 (70%), Positives = 78/107 (72%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+D+ ALAKYTQGFSGADITEICQRACKYAI                NP          
Sbjct: 672 KDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDE 731

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 237
             EI+AAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 732 VSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 395 EDVDLERISKDTHGYVGADLAALCTEAALQCI 426

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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  138 bits (347), Expect = 1e-32
 Identities = 75/108 (69%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+D++ALAKYTQGFSGADITEICQRACKYAI                NP          
Sbjct: 671 KDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDD 730

Query: 377 XXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 237
               IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 731 EVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 395 EDVDLERISKDTHGYVGADLAALCTEAALQCI 426

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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  134 bits (338), Expect = 1e-31
 Identities = 72/110 (65%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = -3

Query: 557  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
            K++DL ALA++TQGFSGADITEICQRACKYAI                NP          
Sbjct: 672  KNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDD 731

Query: 377  XXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD 231
                I+AAHFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP+
Sbjct: 732  EVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPE 781



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +AK T G+ GAD+  +C  A    I
Sbjct: 397 DVDLERIAKDTHGYVGADLAALCTEAALQCI 427

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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  133 bits (335), Expect = 3e-31
 Identities = 73/109 (66%), Positives = 77/109 (70%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KDIDL ALAK+TQGFSGAD+TEICQRACKYAI                NP          
Sbjct: 672 KDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEV 731

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD 231
              I+ AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF D
Sbjct: 732 PE-IKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD 779



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +++DL  ++K T G+ GAD+  +C  A    I
Sbjct: 396 EEVDLERISKDTHGYVGADLAALCTEAALQCI 427

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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/108 (59%), Positives = 70/108 (64%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+DL  LAK T GFSGAD+TEICQRACK AI                NP          
Sbjct: 667 KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDP 726

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 234
             EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 727 VPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 392 DVDLEQVANETHGHVGADLAALCSEAALQAI 422

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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/108 (59%), Positives = 70/108 (64%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+DL  LAK T GFSGAD+TEICQRACK AI                NP          
Sbjct: 667 KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDP 726

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 234
             EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 727 VPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 392 DVDLEQVANETHGHVGADLAALCSEAALQAI 422

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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/108 (59%), Positives = 70/108 (64%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+DL  LAK T GFSGAD+TEICQRACK AI                NP          
Sbjct: 667 KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDP 726

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 234
             EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 727 VPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 392 DVDLEQVANETHGHVGADLAALCSEAALQAI 422

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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  115 bits (287), Expect = 1e-25
 Identities = 64/108 (59%), Positives = 70/108 (64%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+DL  LAK T GFSGAD+TEICQRACK AI                NP          
Sbjct: 667 KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDP 726

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 234
             EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 727 VPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 392 DVDLEQVANETHGHVGADLAALCSEAALQAI 422

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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  112 bits (279), Expect = 9e-25
 Identities = 63/108 (58%), Positives = 69/108 (63%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
           KD+D+  LAK T GFSGAD+TEICQRACK AI                NP          
Sbjct: 668 KDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDP 727

Query: 377 XXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 234
             EIR  HFEE+M+ ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 728 VPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774



 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 393 DVDLEQVANETHGHVGADLAALCSEAALQAI 423

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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  107 bits (268), Expect = 2e-23
 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
 Frame = -3

Query: 557  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
            KD+DL+ LAK T GFSGAD+TEICQRACK AI                            
Sbjct: 675  KDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDD 734

Query: 377  XXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 228
              +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP +
Sbjct: 735  AVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE 788



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRA 477
           D+DL  +A    GF GAD+  +C  A
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEA 424

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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
 Frame = -3

Query: 554  DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
            D+DL+ LAK T GFSGAD+TEICQRACK AI                             
Sbjct: 674  DLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDEL 733

Query: 374  XE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 228
             +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP +
Sbjct: 734  ADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE 786



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           +D+DL  +A    GF GAD+  +C  A
Sbjct: 397 EDVDLEQVANECHGFVGADLASLCSEA 423

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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
 Frame = -3

Query: 551  IDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX 372
            ++L+A+AK TQGFSGAD+  I QRA KYAI                              
Sbjct: 680  LELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGA 739

Query: 371  E------------IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 228
            +            I   HF E+MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F D 
Sbjct: 740  KAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNFNDA 799

Query: 227  P 225
            P
Sbjct: 800  P 800



 Score = 33.9 bits (76), Expect = 0.32
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL ALA  T G+ GADI  +C  A    I
Sbjct: 403 DVDLEALAAETHGYVGADIASLCSEAAMQQI 433

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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = -3

Query: 557  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
            +D+DL A+AK T GFSGAD+  + QRA K AI                 P          
Sbjct: 687  EDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDA 746

Query: 377  XXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF-GSEFRFPD 231
                ++  H EE+MK ARRSVSDA++R+Y+A+A  L  SRG  G +F   D
Sbjct: 747  SVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTGFQFDSAD 797



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  +A  T G+ G+D+  +C  A    I
Sbjct: 413 DVDLEQIAAETHGYVGSDLASLCSEAAMQQI 443

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>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
 Frame = -3

Query: 557  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 378
            +D+D+  +AK T+GFSGADIT +CQ A   AI                            
Sbjct: 1123 EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKID 1182

Query: 377  XX-------EIRAAHFEESMKYARRSVSDADIRKYQAFAQTL 273
                      +   HF+ + K AR S+   D+ KY+ F + L
Sbjct: 1183 DTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/88 (28%), Positives = 40/88 (45%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+++  LA+ T+G+SGADI  +C+ A   AI                             
Sbjct: 645 DVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGM----------TREEAKEAAKK 694

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
            +I   HFEE++K  R S++  D+ KY+
Sbjct: 695 LKITKKHFEEALKKVRPSLTKEDVEKYE 722



 Score = 35.8 bits (81), Expect = 0.084
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  LA+ T GF GAD+  +C+ A  +A+
Sbjct: 370 EDVDLEELAELTNGFVGADLEALCKEAAMHAL 401

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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = -3

Query: 551 IDLSALAKYT-QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           +DL  +AK   +GFSGAD+  + Q+A   A+                +            
Sbjct: 717 VDLDGIAKNNCEGFSGADLAHLVQKATFQAV----------EEMIGSSESSEDDVTDITQ 766

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSE 246
             I+  HFE+++     SV+    R Y A +  LQ+S G  +E
Sbjct: 767 CTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVGRNTE 809

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>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+DL+++A+  +G+SGADIT +C+ A   A+                             
Sbjct: 403 DVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTT---- 458

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
                  FE ++K   +SVS ADI +Y+
Sbjct: 459 ----MEDFEMALKKVSKSVSAADIERYE 482

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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  LAK T+G SGADI  IC  A   AI
Sbjct: 370 EDVDLQKLAKITEGASGADIKAICTEAGMMAI 401

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>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D++L+++A+  +G+SGADIT +C+ A   A+                             
Sbjct: 403 DVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTT---- 458

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
                  FE ++K   +SVS ADI +Y+
Sbjct: 459 ----MEDFEMALKKVSKSVSAADIERYE 482

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>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D++L+++A+  +G+SGADIT +C+ A   A+                             
Sbjct: 403 DVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTT---- 458

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
                  FE ++K   +SVS ADI +Y+
Sbjct: 459 ----MEDFEMALKKISKSVSAADIERYE 482

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>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 24/88 (27%), Positives = 37/88 (42%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           DI L  +A+  +G+SGADIT +C+ A   A+                             
Sbjct: 402 DIQLEDIAEKIEGYSGADITNVCRDASLMAM--------RRRINGLSPEEIRALSKEELQ 453

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
             +    FE ++K   +SVS AD+ KY+
Sbjct: 454 MPVTKGDFELALKKIAKSVSAADLEKYE 481

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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D++L  LAK T+G++GADI  +C+ A   A+
Sbjct: 641 EDVNLEELAKKTEGYTGADIEALCREAAMLAV 672



 Score = 33.5 bits (75), Expect = 0.41
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+DL  LA  T GF GAD+  +C+ A   A+
Sbjct: 367 EDVDLDYLADVTHGFVGADLAALCKEAAMRAL 398

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>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 25/88 (28%), Positives = 37/88 (42%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           DI L  +A+ T+G+SGADIT IC+ A   A+                             
Sbjct: 400 DIHLEDIAEKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQ 451

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
             +     E ++K   +SVS AD+ KY+
Sbjct: 452 MPVTRGDLELALKKIAKSVSAADLEKYE 479

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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +D+D   LA+ T+G SGADI  IC  A  +AI
Sbjct: 332 EDVDFKELARITEGASGADIKAICTEAGMFAI 363

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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           DIDL ++A+   G+SGADIT +C+ A   A+
Sbjct: 428 DIDLKSIAEKMDGYSGADITNVCRDASMMAM 458

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>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+ L  +A  T+G+SGADIT IC+ A   A+                             
Sbjct: 400 DVHLEDIADKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQ 451

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
             +     E ++K   +SVS AD+ KY+
Sbjct: 452 MPVTRGDLELALKKIAKSVSAADLEKYE 479

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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL A+AK T+GFSGAD+  +   A   AI
Sbjct: 331 DVDLEAIAKLTEGFSGADLKAVVVEAGYNAI 361

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>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 22/88 (25%), Positives = 36/88 (40%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+++  +A+   G+SGADIT +C+ A   A+                             
Sbjct: 400 DVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTT---- 455

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
                  FE ++K   +SVS +DI KY+
Sbjct: 456 ----MEDFEMALKKVSKSVSASDIEKYE 479

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>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -3

Query: 551 IDLSALAKYTQGFSGADITEICQRA 477
           ++LS +AK T GFSG+D+ E+C+ A
Sbjct: 286 VELSEIAKQTDGFSGSDLREMCRDA 310

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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +I+L  L++ T+GFSGADI  +C  A   AI
Sbjct: 326 NINLELLSQLTEGFSGADIKNVCVEAAYMAI 356

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>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -3

Query: 548 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 369
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 531 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 577

Query: 368 IRAAHFEESMKYARRSVSDADIRKY 294
           IR + F ES+K  +RSVS   +  Y
Sbjct: 578 IRLSDFTESLKKIKRSVSPQTLEAY 602

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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +++D+  LA+ T G SGAD+  IC  A  +AI
Sbjct: 342 EEVDIELLARITDGASGADLKAICTEAGMFAI 373

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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/88 (21%), Positives = 39/88 (44%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+++  +A+ T+G+SG D+T +C+ A    +                +            
Sbjct: 434 DVNIEDVARRTEGYSGDDLTNVCRDASMNGM-------RRKIAGKTRDEIKNMSKDDISN 486

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQ 291
             +    FEE+++  + SVS +DI K++
Sbjct: 487 DPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -3

Query: 548 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 369
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 533 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 579

Query: 368 IRAAHFEESMKYARRSVSDADIRKY 294
           IR + F ES+K  +RSVS   +  Y
Sbjct: 580 IRLSDFTESLKKIKRSVSPQTLEAY 604

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>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D+DL  LA+ T G++GAD+  + + A  YA+
Sbjct: 401 DVDLDKLAEMTYGYTGADLAALAKEAAIYAL 431

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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 351 DIDFKKLAKVTEGMSGADLKAIATEAGMFAV 381

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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 350 EDIDFKKLAKATEGMSGADLKAIATEAGMFAV 381

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>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 21/97 (21%), Positives = 42/97 (43%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 375
           D+DL+ +A+ T+G+ GAD+  +C+ A   A                              
Sbjct: 657 DVDLNDIAQRTEGYVGADLENLCREAGMNA-----------------------YRENPDA 693

Query: 374 XEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 264
             +   +F +++K  R SV +  I+ Y+  ++T+ +S
Sbjct: 694 TSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKS 730

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>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRA 477
           + DL  +A  T+GFSG+D+ E+C+ A
Sbjct: 280 EFDLQLIADNTKGFSGSDLKELCREA 305

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>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           K +DL A+A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KGVDLRAIAEMTEGASGADLKAIATEAGMFAI 361

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>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           +ID  A+ K + GFS AD+  +C  A  +AI
Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAI 372

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>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/90 (24%), Positives = 36/90 (40%)
 Frame = -3

Query: 551 IDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX 372
           +DL  LA  T+G+SGA++  +CQ A   AI                              
Sbjct: 707 VDLHELADRTEGYSGAEVVLLCQEAGLAAI-----------------------MEDLDVA 743

Query: 371 EIRAAHFEESMKYARRSVSDADIRKYQAFA 282
           ++   HFE++ K   R ++   +  Y+ FA
Sbjct: 744 KVELRHFEKAFKGIARGITPEMLSYYEEFA 773

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>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -3

Query: 551 IDLSALAKYTQGFSGADITEICQRACKYAI 462
           I+L  +A  ++G+SG+D+ E+C+ A  Y +
Sbjct: 285 INLKEIASQSEGYSGSDLKELCRDAAMYRV 314

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 536 LAKYTQGFSGADITEICQRACKYA 465
           LA+ T GFSGADI  IC  A  +A
Sbjct: 509 LAELTPGFSGADIANICNEAALHA 532

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           ++DL A+A+ T G+SGAD+  +   A   A+
Sbjct: 331 EVDLKAVARITGGYSGADLANVVNEAALLAV 361

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>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           K++DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KNVDLRVIAEITEGASGADLKAIATEAGMFAI 361

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           KD+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 342 KDVDPMIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 343 DIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

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>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

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>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

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>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           K+ DL  +A+ T GFSGAD+  +C  A
Sbjct: 894 KNADLKLIAEKTAGFSGADLQGLCYNA 920

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>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYAI 462
           K +DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 328 KGVDLRVIAEITEGASGADLKAIATEAGMFAI 359

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           KD+DL  +A+ T GF+GAD+  +   A   A
Sbjct: 346 KDVDLEFVARATPGFTGADLENLLNEAALLA 376

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>ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondrial precursor|
           (EC 1.18.1.2) (Adrenodoxin reductase) (AR) (Ferredoxin
           reductase) (Ferredoxin--NADP(+) reductase)
          Length = 492

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 409 PKQWRRMRWTRWLRSELPTSRS 344
           P+ WR   W+ W R+ LP SRS
Sbjct: 3   PRCWRWWPWSSWTRTRLPPSRS 24

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>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRA 477
           +I+   LA  T+GFSGAD+  +C+ A
Sbjct: 383 EINYDDLAARTEGFSGADVVSLCRTA 408

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           +D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 87  QDVDAMTLARGTPGYSGADLANLVNEAALFA 117

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           +D+DL  +A+ T GF+GAD++ +   A
Sbjct: 351 QDVDLDKIARRTPGFTGADLSNLLNEA 377

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           +D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 341 QDVDAMTLARGTPGYSGADLANLVNEAALFA 371

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>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           D+DL  +AK T G +GAD+  I   A   A
Sbjct: 369 DVDLQEIAKLTAGLAGADLANIINEAALLA 398

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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D++LS LA  T GF GADI  + + A   A+
Sbjct: 378 DVNLSTLADDTHGFVGADIESLSKEAAMRAL 408

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>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           +D+D   + + T+GFSG+D+T + + A
Sbjct: 669 QDLDYELITEMTEGFSGSDLTSLAKEA 695

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           KD     LA  T GFSGAD+  +C  A   A
Sbjct: 501 KDKLARKLASLTPGFSGADVANVCNEAALIA 531

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>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYA 465
           D+D+  LA  T+ FSGA+I  + + A  +A
Sbjct: 474 DVDMEELASLTKNFSGAEIAGLIKSASSFA 503

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           KD     LA  T GFSGAD+  +C  A   A
Sbjct: 502 KDKLARKLASLTPGFSGADVANVCNEAALIA 532

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRACKYA 465
           +D+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 342 EDVDPMIIARGTPGFSGADLANLVNEAALFA 372

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>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 554 DIDLSALAKYTQGFSGADITEICQRACKYAI 462
           D++   L+  T+ F+GA+I  +C  A  YAI
Sbjct: 481 DVNFDELSTLTKNFTGAEIEGLCNSAKSYAI 511

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 557 KDIDLSALAKYTQGFSGADITEICQRA 477
           KD+D   +A+ T GF+GAD+  +   A
Sbjct: 420 KDVDFDKIARRTPGFTGADLQNLMNEA 446


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,261,821
Number of Sequences: 219361
Number of extensions: 850433
Number of successful extensions: 2449
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 2341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2433
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result