Clone Name	rbags23h24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009381.1| Triticum aestivum clone wlm96.pk032.f11:fis, full...	801	0.0
2	gb|AF384032.1| Zea mays histone deacetylase HDA101 (hda101) mRNA...	180	4e-42
3	gb|AF513382.1| Oryza sativa (japonica cultivar-group) histone de...	180	4e-42
4	dbj|AK068682.1| Oryza sativa (japonica cultivar-group) cDNA clon...	180	4e-42
5	dbj|AK068051.1| Oryza sativa (japonica cultivar-group) cDNA clon...	180	4e-42
6	gb|AY107370.1| Zea mays PCO095363 mRNA sequence	155	2e-34
7	gb|AF035815.1|AF035815 Zea mays putative histone deacetylase RPD...	151	4e-33
8	gb|BT009487.1| Triticum aestivum clone wr1.pk0057.d6:fis, full i...	141	3e-30
9	ref|XM_464638.1| Oryza sativa (japonica cultivar-group), mRNA	139	1e-29
10	gb|AF513384.1| Oryza sativa (japonica cultivar-group) histone de...	139	1e-29
11	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
12	dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic D...	139	1e-29
13	dbj|AK120027.1| Oryza sativa (japonica cultivar-group) cDNA clon...	139	1e-29
14	gb|AY112571.1| Zea mays CL997_1 mRNA sequence	123	8e-25
15	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
16	dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D...	109	1e-20
17	gb|AF332875.1|AF332875 Oryza sativa histone deacetylase HD1 mRNA...	101	3e-18
18	ref|XM_464641.1| Oryza sativa (japonica cultivar-group), mRNA	92	3e-15
19	ref|XM_464643.1| Oryza sativa (japonica cultivar-group), mRNA	92	3e-15
20	gb|AF513383.1| Oryza sativa (japonica cultivar-group) histone de...	92	3e-15
21	dbj|AK103097.1| Oryza sativa (japonica cultivar-group) cDNA clon...	92	3e-15
22	dbj|AK064000.1| Oryza sativa (japonica cultivar-group) cDNA clon...	92	3e-15
23	gb|BT013616.1| Lycopersicon esculentum clone 132417F, mRNA sequence	78	4e-11
24	emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on...	78	4e-11
25	gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete se...	78	4e-11
26	dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D...	72	3e-09
27	ref|NM_119974.2| Arabidopsis thaliana HD1; histone deacetylase A...	58	4e-05
28	gb|BT008873.1| Arabidopsis thaliana At4g38130 mRNA, complete cds	58	4e-05
29	emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ...	58	4e-05
30	emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B...	58	4e-05
31	gb|AY093153.1| Arabidopsis thaliana histone deacetylase (At4g381...	58	4e-05
32	emb|BX827687.1|CNS0A3TR Arabidopsis thaliana Full-length cDNA Co...	58	4e-05
33	emb|BX827416.1|CNS0A2E5 Arabidopsis thaliana Full-length cDNA Co...	58	4e-05
34	gb|AF195547.1|AF195547 Arabidopsis thaliana putative histone dea...	58	4e-05
35	gb|AF014824.1|AF014824 Arabidopsis thaliana histone deacetylase ...	58	4e-05
36	dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone...	54	6e-04
37	gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete se...	52	0.002
38	gb|AC140849.8| Medicago truncatula clone mth2-17f20, complete se...	52	0.002
39	ref|XR_002514.1| PREDICTED: Mus musculus similar to paired-Ig-li...	46	0.15
40	ref|XM_815649.1| Trypanosoma cruzi strain CL Brener mucin-associ...	46	0.15
41	gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, co...	46	0.15
42	dbj|AK142375.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful...	46	0.15
43	dbj|AK161081.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu...	46	0.15
44	dbj|AK152232.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	46	0.15
45	dbj|AK153116.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	46	0.15
46	dbj|AK165255.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f...	46	0.15
47	dbj|AK170720.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	46	0.15
48	dbj|AK170618.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	46	0.15
49	gb|AF148880.1|AF148880 Mus musculus strain C57BL/6J paired immun...	46	0.15
50	gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, com...	46	0.15
51	gb|U83172.1|MMU83172 Mus musculus cell-surface glycoprotein p91 ...	46	0.15
52	gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromo...	44	0.59
53	ref|XM_756778.1| Ustilago maydis 521 hypothetical protein (UM057...	44	0.59
54	gb|AC006455.2| Homo sapiens PAC clone RP5-905H7 from 7, complete...	44	0.59
55	gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromo...	44	0.59
56	gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromo...	44	0.59
57	gb|AC134619.2| Homo sapiens BAC clone RP11-1367K15 from 7, compl...	44	0.59
58	gb|AC127700.2| Homo sapiens PAC clone RP5-1012J16 from 7, comple...	44	0.59
59	gb|AC156592.2| Laccaria bicolor clone JGIAHZW-10X, complete sequ...	44	0.59
60	ref|XM_815988.1| Trypanosoma cruzi strain CL Brener mucin-associ...	42	2.3
61	gb|AC068075.16| Homo sapiens chromosome 8, clone RP11-756K15, co...	42	2.3
62	gb|AC139147.2| Homo sapiens chromosome 15, clone RP11-107D24, co...	42	2.3
63	gb|AC004025.1|AC004025 Homo sapiens Xp22 BAC GS-321G17 (Genome S...	42	2.3
64	gb|BC088829.1| Homo sapiens mitogen-activated protein kinase kin...	40	9.2
65	gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence	40	9.2
66	ref|XM_481792.1| Oryza sativa (japonica cultivar-group), mRNA	40	9.2
67	ref|NM_001009194.1| Ovis aries aquaporin 1 (AQP1), mRNA	40	9.2
68	ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcri...	40	9.2
69	ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcri...	40	9.2
70	ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcri...	40	9.2
71	ref|XM_418846.1| PREDICTED: Gallus gallus similar to velo1 (LOC4...	40	9.2
72	gb|BT025412.1| Bos taurus aquaporin 1 (Colton blood group) (AQP1...	40	9.2
73	ref|NM_004964.2| Homo sapiens histone deacetylase 1 (HDAC1), mRNA	40	9.2
74	gb|BC054503.2| Homo sapiens mitogen-activated protein kinase kin...	40	9.2
75	ref|XM_954077.1| Neurospora crassa OR74A hypothetical protein (N...	40	9.2
76	gb|BC000301.2| Homo sapiens histone deacetylase 1, mRNA (cDNA cl...	40	9.2
77	ref|XM_331617.1| Neurospora crassa OR74A hypothetical protein (N...	40	9.2
78	gb|AY627042.1| Homo sapiens histone deacetylase 1 mRNA, complete...	40	9.2
79	ref|XM_453161.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D02090g ...	40	9.2
80	ref|XM_989314.1| PREDICTED: Mus musculus similar to histone deac...	40	9.2
81	ref|XM_973543.1| PREDICTED: Mus musculus similar to histone deac...	40	9.2
82	ref|XM_909745.2| PREDICTED: Mus musculus similar to histone deac...	40	9.2
83	gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, com...	40	9.2
84	ref|XM_859623.1| PREDICTED: Canis familiaris similar to histone ...	40	9.2
85	ref|XM_859607.1| PREDICTED: Canis familiaris similar to histone ...	40	9.2
86	ref|XM_544435.2| PREDICTED: Canis familiaris similar to histone ...	40	9.2
87	gb|AC010125.4| Homo sapiens PAC clone RP5-1075C10 from 7, comple...	40	9.2
88	gb|AC145819.1| Pan troglodytes BAC clone RP43-99J22 from 7, comp...	40	9.2
89	emb|AL596275.10| Human DNA sequence from clone RP11-183G22 on ch...	40	9.2
90	ref|XM_501728.1| Yarrowia lipolytica CLIB122, YALI0C11561g predi...	40	9.2
91	emb|AL109945.15|HSJ811H24 Human DNA sequence from clone RP4-811H...	40	9.2
92	emb|AL024508.1|HS325F22 Human DNA sequence from clone RP3-325F22...	40	9.2
93	ref|XM_963953.1| PREDICTED: Tribolium castaneum similar to CG405...	40	9.2
94	emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...	40	9.2
95	gb|BT007472.1| Synthetic construct Homo sapiens histone deacetyl...	40	9.2
96	gb|BC097943.1| Rattus norvegicus histone deacetylase 1 (predicte...	40	9.2
97	ref|NM_001025409.1| Rattus norvegicus histone deacetylase 1 (pre...	40	9.2
98	emb|CR859057.1| Pongo pygmaeus mRNA; cDNA DKFZp468K082 (from clo...	40	9.2
99	emb|CR616540.1| full-length cDNA clone CS0DI031YC03 of Placenta ...	40	9.2
100	emb|CR611580.1| full-length cDNA clone CS0DA011YG11 of Neuroblas...	40	9.2
101	emb|CR604646.1| full-length cDNA clone CS0DB009YN22 of Neuroblas...	40	9.2
102	dbj|D84476.2| Homo sapiens ASK1 mRNA for apoptosis signal-regula...	40	9.2
103	ref|NM_174702.3| Bos taurus aquaporin 1 (Aqp1), mRNA	40	9.2
104	gb|AF009037.1|AF009037 Ovis aries aquaporin 1 (aqp1) mRNA, compl...	40	9.2
105	gb|BC105525.1| Bos taurus aquaporin 1, mRNA (cDNA clone MGC:1290...	40	9.2
106	ref|XM_688693.1| PREDICTED: Danio rerio similar to Tripartite mo...	40	9.2
107	emb|CR541717.1| Homo sapiens full open reading frame cDNA clone ...	40	9.2
108	emb|BX649490.11| Zebrafish DNA sequence from clone DKEY-103K4 in...	40	9.2
109	gb|S74759.1|S74759S1 water channel protein CHIP29 [cattle, ocula...	40	9.2
110	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.2
111	gb|AF321129.1|AF321129 Rattus norvegicus histone deacetylase 1 (...	40	9.2
112	dbj|D50405.1| Homo sapiens mRNA for RPD3 protein, complete cds	40	9.2
113	ref|NM_005923.3| Homo sapiens mitogen-activated protein kinase k...	40	9.2
114	ref|XM_576595.1| PREDICTED: Rattus norvegicus histone deacetylas...	40	9.2
115	gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosom...	40	9.2
116	gb|BC059156.1| Rattus norvegicus histone deacetylase 1 (predicte...	40	9.2
117	gb|AY891420.1| Synthetic construct Homo sapiens clone FLH014187....	40	9.2
118	emb|BX648622.1|HSM808773 Homo sapiens mRNA; cDNA DKFZp686O01235 ...	40	9.2
119	gb|AY890400.1| Synthetic construct Homo sapiens clone FLH018878....	40	9.2
120	dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.2
121	dbj|AK111861.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	9.2
122	gb|AY893466.1| Synthetic construct Homo sapiens clone FLH127843....	40	9.2
123	gb|AY893265.1| Synthetic construct Homo sapiens clone FLH130972....	40	9.2
124	gb|AC005095.2|AC005095 Homo sapiens BAC clone CTA-332P12 from 7q...	40	9.2
125	emb|AL772289.10| Zebrafish DNA sequence from clone CH211-8A9 in ...	40	9.2
126	emb|BX000465.12| Zebrafish DNA sequence from clone DKEY-30A6 in ...	40	9.2
127	gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosom...	40	9.2
128	dbj|AK112923.1| Ciona intestinalis cDNA, clone:ciad027n15, full ...	40	9.2
129	gb|AE016830.1| Enterococcus faecalis V583, complete genome	40	9.2
130	gb|U67156.1|HSU67156 Human mitogen-activated kinase kinase kinas...	40	9.2
131	gb|U50079.1|HSU50079 Human histone deacetylase HD1 mRNA, complet...	40	9.2
132	gb|BC107476.1| Rattus norvegicus histone deacetylase 1 (predicte...	40	9.2
133	gb|AF028005.1|AF028005 Bos taurus water channel protein CHIP29 m...	40	9.2
134	emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1...	40	9.2
135	dbj|AB209093.1| Homo sapiens mRNA for mitogen-activated protein ...	40	9.2
136	emb|AL732412.8| Mouse DNA sequence from clone RP23-114P13 on chr...	40	9.2

---

>gb|BT009381.1| Triticum aestivum clone wlm96.pk032.f11:fis, full insert mRNA
            sequence
          Length = 1874

 Score =  801 bits (404), Expect = 0.0
 Identities = 528/568 (92%), Gaps = 6/568 (1%)
 Strand = Plus / Minus

                                                                        
Query: 110  cgcacggtccgaatgcttacaatcatggcttctggtagatggctggtgggtccggcaact 169
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1683 cgcacggtccgaatgcttacaatcatggcttctggtagatggctggtgggtcaggcaact 1624

                                                                        
Query: 170  tactagagcttcctgactcaatcttgacatttcccggctcatcgacagccatggcattag 229
            |  ||||||||||||| ||  ||||||||||||| |||||||| || |||||||||||||
Sbjct: 1623 tggtagagcttcctgattcggtcttgacatttccgggctcatccacggccatggcattag 1564

                                                                        
Query: 230  catcga---gatgagcttgcttagatggaccgatgtcttctgccataggttctggtcctc 286
            | ||||   ||||||||||||| || || | ||||||||||||||| ||||||| |||||
Sbjct: 1563 cgtcgacctgatgagcttgcttggaggggctgatgtcttctgccattggttctgatcctc 1504

                                                                        
Query: 287  tatgttcacctgttactctgctaccatcctg---atcttttgtttcagctccagctgatt 343
            |||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||
Sbjct: 1503 tatgttcacctgttactctgctaccatcctgctgatcttttgtctcagctccagctgatt 1444

                                                                        
Query: 344  ctctcttaactcttgcaccttgaatagtgattctccttgctgagtcttccaaaggtgtgt 403
            ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1443 ctctcttaactcttgtaccttgaatagtgcttctccttgctgagtcttccaaaggtgtgt 1384

                                                                        
Query: 404  gataatccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttcat 463
            ||||||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1383 gataatccaattccatatcagaatcatggtcatcatgcctttcatcctgatcctcttcat 1324

                                                                        
Query: 464  cttcatccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctagggg 523
            |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 1323 cttcatccggctcagggaactcggtatcaggaggtcgctcttgaaactgaacgctagggg 1264

                                                                        
Query: 524  catgcctgagttttgaaagattgtcaagaagtttgcttcttatattatccagttcgtagt 583
            |||| |  ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| 
Sbjct: 1263 catgtcgaagttttgaaagattgtcaagaagtttggttcttatattatctagttcatagc 1204

                                                                        
Query: 584  gtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagt 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1203 gtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccgaagt 1144

                                        
Query: 644  attcatagtactcattgacaggcatctt 671
            | ||||||||||||||||||||||||||
Sbjct: 1143 actcatagtactcattgacaggcatctt 1116



 Score =  163 bits (82), Expect = 9e-37
 Identities = 94/98 (95%)
 Strand = Plus / Minus

                                                                        
Query: 8    cgactatacatattacagcttaataatccatgctgcatgtatacatgggttagacactcg 67
            |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1796 cgactatacatattacagcttaataatccatgctacatgtatacatgggtcagacactcg 1737

                                                  
Query: 68   agactaccactcatcacttcgtctttttactgtcaaaa 105
            |||||||||||| ||||||||||||||||||| |||||
Sbjct: 1736 agactaccactcgtcacttcgtctttttactgccaaaa 1699

---

>gb|AF384032.1| Zea mays histone deacetylase HDA101 (hda101) mRNA, complete cds
          Length = 1906

 Score =  180 bits (91), Expect = 4e-42
 Identities = 224/265 (84%), Gaps = 5/265 (1%)
 Strand = Plus / Minus

                                                                        
Query: 408  atccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttcatcttc 467
            ||||| |||||| ||||| |||||   |||||| | ||||||  |||| |||| ||||||
Sbjct: 1315 atccacttccatatcagagtcagg---atcatgtcgttcatctggatcatcttgatcttc 1259

                                                                        
Query: 468  atccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggggcatg 527
            |||  ||||||| |  || || ||||||  || ||||||||| ||||| ||||| |||||
Sbjct: 1258 atcttgctcaggtatttctgtgtcaggaactctctcttgaaagtggacactaggagcatg 1199

                                                                        
Query: 528  cctgagttttgaaagattgtcaagaagtttgcttcttatattatccagttcgtagt-gtg 586
             |  |||||||||||||| || ||||||||   || ||||| |||||||| || || |||
Sbjct: 1198 tcgaagttttgaaagattatccagaagtttagatcgtatatcatccagtt-gttgtcgtg 1140

                                                                        
Query: 587  tatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtatt 646
            |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 1139 tatttttgttctccatgttacttggtgcaacatgaagagtgtaatctggaccgaagtatt 1080

                                     
Query: 647  catagtactcattgacaggcatctt 671
            ||||||||||||| |||||||||||
Sbjct: 1079 catagtactcattaacaggcatctt 1055



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 239  gagcttgcttagatggaccgatgtcttctgccataggttctggtcctctatgttca 294
            |||||||||| || | ||| |||||||||||||| |||||  ||||||||||||||
Sbjct: 1481 gagcttgcttggaggaaccaatgtcttctgccatgggttccagtcctctatgttca 1426

---

>gb|AF513382.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC1
            mRNA, complete cds; alternatively spliced
          Length = 1859

 Score =  180 bits (91), Expect = 4e-42
 Identities = 261/317 (82%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                        
Query: 343  tctctcttaactcttgcaccttgaatagtgattctccttgctgagtcttccaaaggtgtg 402
            ||||||||||||||  ||   |||||| || | |||||| ||||||| ||||||||| ||
Sbjct: 1408 tctctcttaactctcacattctgaatactgctcctccttcctgagtcatccaaaggtttg 1349

                                                                        
Query: 403  tgataatccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttca 462
              || |||||||||||  ||||||||||   |||  |||||||||||  |||||||||  
Sbjct: 1348 acatcatccatttccacatcagaatcag---catggtgcctttcatcaggatcctcttgg 1292

                                                                        
Query: 463  tcttcatccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggg 522
            ||||||||  ||||||| | |||||  ||||| |||||||||||||| ||||||||||| 
Sbjct: 1291 tcttcatcttgctcaggtagctcagcctcagggggtcgctcttgaaattggacgctagga 1232

                                                                        
Query: 523  gcatgcctgagttttgaaagattgtcaagaagtttgcttcttatattatccagttcgtag 582
            ||||| |  |||||||||||||| ||||||||| |   |||||||| |||||  |  | |
Sbjct: 1231 gcatgtcgaagttttgaaagattatcaagaagtcttgatcttatatcatccaactgctgg 1172

                                                                        
Query: 583  tgtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaag 642
             |||| |||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1171 cgtgtgtttttgttctccatgttacttggtgcaacatgaagtgtataatctggaccaaag 1112

                             
Query: 643  tattcatagtactcatt 659
            || ||| | ||||||||
Sbjct: 1111 tactcaaaatactcatt 1095

---

>dbj|AK068682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158M05, full
            insert sequence
          Length = 2119

 Score =  180 bits (91), Expect = 4e-42
 Identities = 261/317 (82%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                        
Query: 343  tctctcttaactcttgcaccttgaatagtgattctccttgctgagtcttccaaaggtgtg 402
            ||||||||||||||  ||   |||||| || | |||||| ||||||| ||||||||| ||
Sbjct: 1425 tctctcttaactctcacattctgaatactgctcctccttcctgagtcatccaaaggtttg 1366

                                                                        
Query: 403  tgataatccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttca 462
              || |||||||||||  ||||||||||   |||  |||||||||||  |||||||||  
Sbjct: 1365 acatcatccatttccacatcagaatcag---catggtgcctttcatcaggatcctcttgg 1309

                                                                        
Query: 463  tcttcatccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggg 522
            ||||||||  ||||||| | |||||  ||||| |||||||||||||| ||||||||||| 
Sbjct: 1308 tcttcatcttgctcaggtagctcagcctcagggggtcgctcttgaaattggacgctagga 1249

                                                                        
Query: 523  gcatgcctgagttttgaaagattgtcaagaagtttgcttcttatattatccagttcgtag 582
            ||||| |  |||||||||||||| ||||||||| |   |||||||| |||||  |  | |
Sbjct: 1248 gcatgtcgaagttttgaaagattatcaagaagtcttgatcttatatcatccaactgctgg 1189

                                                                        
Query: 583  tgtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaag 642
             |||| |||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1188 cgtgtgtttttgttctccatgttacttggtgcaacatgaagtgtataatctggaccaaag 1129

                             
Query: 643  tattcatagtactcatt 659
            || ||| | ||||||||
Sbjct: 1128 tactcaaaatactcatt 1112

---

>dbj|AK068051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B02, full
            insert sequence
          Length = 2511

 Score =  180 bits (91), Expect = 4e-42
 Identities = 261/317 (82%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                        
Query: 343  tctctcttaactcttgcaccttgaatagtgattctccttgctgagtcttccaaaggtgtg 402
            ||||||||||||||  ||   |||||| || | |||||| ||||||| ||||||||| ||
Sbjct: 1425 tctctcttaactctcacattctgaatactgctcctccttcctgagtcatccaaaggtttg 1366

                                                                        
Query: 403  tgataatccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttca 462
              || |||||||||||  ||||||||||   |||  |||||||||||  |||||||||  
Sbjct: 1365 acatcatccatttccacatcagaatcag---catggtgcctttcatcaggatcctcttgg 1309

                                                                        
Query: 463  tcttcatccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggg 522
            ||||||||  ||||||| | |||||  ||||| |||||||||||||| ||||||||||| 
Sbjct: 1308 tcttcatcttgctcaggtagctcagcctcagggggtcgctcttgaaattggacgctagga 1249

                                                                        
Query: 523  gcatgcctgagttttgaaagattgtcaagaagtttgcttcttatattatccagttcgtag 582
            ||||| |  |||||||||||||| ||||||||| |   |||||||| |||||  |  | |
Sbjct: 1248 gcatgtcgaagttttgaaagattatcaagaagtcttgatcttatatcatccaactgctgg 1189

                                                                        
Query: 583  tgtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaag 642
             |||| |||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1188 cgtgtgtttttgttctccatgttacttggtgcaacatgaagtgtataatctggaccaaag 1129

                             
Query: 643  tattcatagtactcatt 659
            || ||| | ||||||||
Sbjct: 1128 tactcaaaatactcatt 1112

---

>gb|AY107370.1| Zea mays PCO095363 mRNA sequence
          Length = 2019

 Score =  155 bits (78), Expect = 2e-34
 Identities = 189/226 (83%)
 Strand = Plus / Minus

                                                                        
Query: 434  catcatgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcag 493
            ||||||| ||||||||  ||| |||||  ||||||||  ||||||| |||||||  ||||
Sbjct: 1391 catcatgtctttcatcaggattctctttgtcttcatcttgctcaggtaactcagcctcag 1332

                                                                        
Query: 494  gaggtcgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaa 553
            ||||||||||||||||||| || ||||| ||||| | ||||||||||||||| || ||||
Sbjct: 1331 gaggtcgctcttgaaactgaacactaggagcatgtcggagttttgaaagattatctagaa 1272

                                                                        
Query: 554  gtttgcttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtg 613
            ||||   | |||| | ||||| ||  |   |||| ||||| ||||||||||||||||| |
Sbjct: 1271 gttttgattttatgtcatccaattgatgccgtgtgtttttattctccatgttacttggag 1212

                                                          
Query: 614  ctacatgaagagtgtaatctggaccaaagtattcatagtactcatt 659
            | ||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 1211 cgacatgtagagtgtaatctggaccaaaatactcatagtactcatt 1166

---

>gb|AF035815.1|AF035815 Zea mays putative histone deacetylase RPD3 mRNA, complete cds
          Length = 2047

 Score =  151 bits (76), Expect = 4e-33
 Identities = 85/88 (96%)
 Strand = Plus / Minus

                                                                        
Query: 584  gtgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagt 643
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1245 gtgtatttttgttctccatgttacttggtgcaacatgaagagtgtaatctggaccgaagt 1186

                                        
Query: 644  attcatagtactcattgacaggcatctt 671
            |||||||||||||||| |||||||||||
Sbjct: 1185 attcatagtactcattaacaggcatctt 1158



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 239  gagcttgcttagatggaccgatgtcttctgccataggttctggtcctctatgttca 294
            |||||||||| || | ||| |||||||||||||| |||||  ||||||||||||||
Sbjct: 1572 gagcttgcttggaggaaccaatgtcttctgccatgggttccagtcctctatgttca 1517



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 107/135 (79%), Gaps = 3/135 (2%)
 Strand = Plus / Minus

                                                                        
Query: 408  atccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttcatcttc 467
            ||||| |||||| ||||| |||||   |||||| | ||||||  |||| |||| ||||||
Sbjct: 1406 atccacttccatatcagagtcagg---atcatgtcgttcatctggatcatcttgatcttc 1350

                                                                        
Query: 468  atccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggggcatg 527
            |||  ||||||| |  || || ||||||  || ||||||||| ||||| ||||| |||||
Sbjct: 1349 atcttgctcaggtatttctgtgtcaggaactctctcttgaaagtggacactaggagcatg 1290

                           
Query: 528  cctgagttttgaaag 542
             |  |||||||||||
Sbjct: 1289 tcgaagttttgaaag 1275

---

>gb|BT009487.1| Triticum aestivum clone wr1.pk0057.d6:fis, full insert mRNA
           sequence
          Length = 1765

 Score =  141 bits (71), Expect = 3e-30
 Identities = 285/355 (80%), Gaps = 6/355 (1%)
 Strand = Plus / Minus

                                                                       
Query: 308 taccatcctgatcttttgt---ttcagctccagctgattctctcttaactcttgcacctt 364
           |||||||||||||| ||||    |||| | |||| ||||||||||||||||| ||||| |
Sbjct: 817 taccatcctgatctgttgtcacctcagtttcagcagattctctcttaactctcgcaccct 758

                                                                       
Query: 365 gaatagtgattctccttgctgagtcttccaaaggtgtgtgataatccatttccatgtcag 424
           || || || |||||||| | ||||| |||| |||  ||  || |||||||||||  ||||
Sbjct: 757 gagtactggttctcctttcagagtcctccagaggcttggcatcatccatttccacatcag 698

                                                                       
Query: 425 aatcagggccatcatgcctttcatcctgatcctcttcatcttcatccggctcagggaact 484
           | ||||   ||| ||||||||||||  ||| ||||| ||| |||||  |||| ||   ||
Sbjct: 697 agtcag---catgatgcctttcatcaggattctcttgatcctcatcttgctctggttgct 641

                                                                       
Query: 485 cagtatcaggaggtcgctcttgaaactggacgctaggggcatgcctgagttttgaaagat 544
           | |  ||||||||||||||||||||||| || ||||| ||||||| |||||||| |||||
Sbjct: 640 cggcctcaggaggtcgctcttgaaactgcacactaggagcatgccggagttttgtaagat 581

                                                                       
Query: 545 tgtcaagaagtttgcttcttatattatccagttcgtagtgtgtatttttgttctccatgt 604
           | || |||||| |   |||||| | |||||  |    |||||| |||||||||||||| |
Sbjct: 580 tttcgagaagtcttgatcttatttcatccaaatgccggtgtgtgtttttgttctccatat 521

                                                                  
Query: 605 tacttggtgctacatgaagagtgtaatctggaccaaagtattcatagtactcatt 659
           |||||||||| ||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 520 tacttggtgcaacatgaagagtataatctgggccaaaatactcataatactcatt 466

---

>ref|XM_464638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score =  139 bits (70), Expect = 1e-29
 Identities = 184/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  ||||||||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1262 tgcctttcatctggatcctcttgatcttcatctggctcaggtagctttgtttcaggaatt 1203

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||||||| ||||||||||| |||||    ||||||||||||||||| ||||  |||
Sbjct: 1202 cgctcttgaaattggacgctaggtgcatgttgaagttttgaaagattgtccagaatattg 1143

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||||||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1142 cattttatttcctccagttgcttgtttgtatttctgttctccatgttacttgctgcaacg 1083

                                                      
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactcattg 660
            | |||| |||| ||||||||||| |||||||| |||||||||
Sbjct: 1082 taaagactgtattctggaccaaaatattcataatactcattg 1041



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 265  tctgccataggttctggtcctctatgttcacctgttactctgctaccatcctgatcttt 323
            |||||||| |||||||||||| |||||||   ||||| |||  |||||| |||||||||
Sbjct: 1430 tctgccatcggttctggtcctttatgttcggttgttaatctcttaccatgctgatcttt 1372

---

>gb|AF513384.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC3
            mRNA, complete cds; alternatively spliced
          Length = 2043

 Score =  139 bits (70), Expect = 1e-29
 Identities = 184/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  ||||||||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1358 tgcctttcatctggatcctcttgatcttcatctggctcaggtagctttgtttcaggaatt 1299

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||||||| ||||||||||| |||||    ||||||||||||||||| ||||  |||
Sbjct: 1298 cgctcttgaaattggacgctaggtgcatgttgaagttttgaaagattgtccagaatattg 1239

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||||||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1238 cattttatttcctccagttgcttgtttgtatttctgttctccatgttacttgctgcaacg 1179

                                                      
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactcattg 660
            | |||| |||| ||||||||||| |||||||| |||||||||
Sbjct: 1178 taaagactgtattctggaccaaaatattcataatactcattg 1137



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 265  tctgccataggttctggtcctctatgttcacctgttactctgctaccatcctgatcttt 323
            |||||||| |||||||||||| |||||||   ||||| |||  |||||| |||||||||
Sbjct: 1526 tctgccatcggttctggtcctttatgttcggttgttaatctcttaccatgctgatcttt 1468

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                            
Query: 490      tcaggaggtcgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtca 549
                ||||| |||||||||||||| ||||||||||| ||||| |  |||||||||||||| |||
Sbjct: 22450566 tcagggggtcgctcttgaaattggacgctaggagcatgtcgaagttttgaaagattatca 22450625

                                                                            
Query: 550      agaagtttgcttcttatattatccagttcgtagtgtgtatttttgttctccatgttactt 609
                |||||| |   |||||||| |||||  |  | | |||| |||||||||||||||||||||
Sbjct: 22450626 agaagtcttgatcttatatcatccaactgctggcgtgtgtttttgttctccatgttactt 22450685

                                                                  
Query: 610      ggtgctacatgaagagtgtaatctggaccaaagtattcatagtactcatt 659
                ||||| |||||||| || ||||||||||||||||| ||| | ||||||||
Sbjct: 22450686 ggtgcaacatgaagtgtataatctggaccaaagtactcaaaatactcatt 22450735



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 76/93 (81%), Gaps = 3/93 (3%)
 Strand = Plus / Plus

                                                                            
Query: 378      ccttgctgagtcttccaaaggtgtgtgataatccatttccatgtcagaatcagggccatc 437
                |||| ||||||| ||||||||| ||  || |||||||||||  ||||||||||   ||| 
Sbjct: 22449904 ccttcctgagtcatccaaaggtttgacatcatccatttccacatcagaatcag---catg 22449960

                                                 
Query: 438      atgcctttcatcctgatcctcttcatcttcatc 470
                 |||||||||||  |||||||||  ||||||||
Sbjct: 22449961 gtgcctttcatcaggatcctcttggtcttcatc 22449993

---

>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0498C03
          Length = 146394

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                         
Query: 490   tcaggaggtcgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtca 549
             ||||| |||||||||||||| ||||||||||| ||||| |  |||||||||||||| |||
Sbjct: 87699 tcagggggtcgctcttgaaattggacgctaggagcatgtcgaagttttgaaagattatca 87758

                                                                         
Query: 550   agaagtttgcttcttatattatccagttcgtagtgtgtatttttgttctccatgttactt 609
             |||||| |   |||||||| |||||  |  | | |||| |||||||||||||||||||||
Sbjct: 87759 agaagtcttgatcttatatcatccaactgctggcgtgtgtttttgttctccatgttactt 87818

                                                               
Query: 610   ggtgctacatgaagagtgtaatctggaccaaagtattcatagtactcatt 659
             ||||| |||||||| || ||||||||||||||||| ||| | ||||||||
Sbjct: 87819 ggtgcaacatgaagtgtataatctggaccaaagtactcaaaatactcatt 87868



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 76/93 (81%), Gaps = 3/93 (3%)
 Strand = Plus / Plus

                                                                         
Query: 378   ccttgctgagtcttccaaaggtgtgtgataatccatttccatgtcagaatcagggccatc 437
             |||| ||||||| ||||||||| ||  || |||||||||||  ||||||||||   ||| 
Sbjct: 87037 ccttcctgagtcatccaaaggtttgacatcatccatttccacatcagaatcag---catg 87093

                                              
Query: 438   atgcctttcatcctgatcctcttcatcttcatc 470
              |||||||||||  |||||||||  ||||||||
Sbjct: 87094 gtgcctttcatcaggatcctcttggtcttcatc 87126

---

>dbj|AK120027.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C11, full
            insert sequence
          Length = 1651

 Score =  139 bits (70), Expect = 1e-29
 Identities = 184/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  ||||||||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1016 tgcctttcatctggatcctcttgatcttcatctggctcaggtagctttgtttcaggaatt 957

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||||||| ||||||||||| |||||    ||||||||||||||||| ||||  |||
Sbjct: 956  cgctcttgaaattggacgctaggtgcatgttgaagttttgaaagattgtccagaatattg 897

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||||||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 896  cattttatttcctccagttgcttgtttgtatttctgttctccatgttacttgctgcaacg 837

                                                      
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactcattg 660
            | |||| |||| ||||||||||| |||||||| |||||||||
Sbjct: 836  taaagactgtattctggaccaaaatattcataatactcattg 795



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 265  tctgccataggttctggtcctctatgttcacctgttactctgctaccatcctgatcttt 323
            |||||||| |||||||||||| |||||||   ||||| |||  |||||| |||||||||
Sbjct: 1184 tctgccatcggttctggtcctttatgttcggttgttaatctcttaccatgctgatcttt 1126

---

>gb|AY112571.1| Zea mays CL997_1 mRNA sequence
          Length = 2130

 Score =  123 bits (62), Expect = 8e-25
 Identities = 71/74 (95%)
 Strand = Plus / Minus

                                                                        
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcatagtactca 657
            ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1231 tccatgttacttggtgcaacatgaagagtgtaatctggaccgaagtattcatagtactca 1172

                          
Query: 658  ttgacaggcatctt 671
            || |||||||||||
Sbjct: 1171 ttaacaggcatctt 1158



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 239  gagcttgcttagatggaccgatgtcttctgccataggttctggtcctctatgttca 294
            |||||||||| || | ||| |||||||||||||| |||||  ||||||||||||||
Sbjct: 1584 gagcttgcttggaggaaccaatgtcttctgccatgggttccagtcctctatgttca 1529



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 120/150 (80%), Gaps = 3/150 (2%)
 Strand = Plus / Minus

                                                                        
Query: 408  atccatttccatgtcagaatcagggccatcatgcctttcatcctgatcctcttcatcttc 467
            ||||| |||||| ||||| |||||   |||||| | ||||||  |||| |||| ||||||
Sbjct: 1418 atccacttccatatcagagtcagg---atcatgtcgttcatctggatcatcttgatcttc 1362

                                                                        
Query: 468  atccggctcagggaactcagtatcaggaggtcgctcttgaaactggacgctaggggcatg 527
            |||  ||||||| |  || || ||||||  || ||||||||| ||||| ||||| |||||
Sbjct: 1361 atcttgctcaggtatttctgtgtcaggaactctctcttgaaagtggacactaggagcatg 1302

                                          
Query: 528  cctgagttttgaaagattgtcaagaagttt 557
             |  |||||||||||||| || ||||||||
Sbjct: 1301 tcgaagttttgaaagattatccagaagttt 1272

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                           
Query: 498     tcgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagttt 557
               |||||||||||| ||||||||||| |||||    ||||||||||||||||| ||||  ||
Sbjct: 6426464 tcgctcttgaaattggacgctaggtgcatgttgaagttttgaaagattgtccagaatatt 6426523

                                                                           
Query: 558     gcttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctac 617
               || | |||| |  |||||||  | || ||||||| |||||||||||||||||| ||| ||
Sbjct: 6426524 gcattttatttcctccagttgcttgtttgtatttctgttctccatgttacttgctgcaac 6426583

                                                          
Query: 618     atgaagagtgtaatctggaccaaagtattcatagtactcattg 660
                | |||| |||| ||||||||||| |||||||| |||||||||
Sbjct: 6426584 gtaaagactgtattctggaccaaaatattcataatactcattg 6426626



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                           
Query: 585     tgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagta 644
               ||||||| |||||||||||||||||| ||| || | |||| |||| ||||||||||| ||
Sbjct: 6449154 tgtatttctgttctccatgttacttgctgcaacgtaaagactgtattctggaccaaaata 6449095

                           
Query: 645     ttcatagtactc 656
               |||||| |||||
Sbjct: 6449094 ttcataatactc 6449083



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 439     tgcctttcatcctgatcctcttcatcttcatccggct 475
               |||||||||||  ||||||||| ||||||||| ||||
Sbjct: 6426296 tgcctttcatctggatcctcttgatcttcatctggct 6426332



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 265     tctgccataggttctggtcctctatgttc 293
               |||||||| |||||||||||| |||||||
Sbjct: 6424330 tctgccatcggttctggtcctttatgttc 6424358

---

>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_D05
          Length = 128178

 Score =  109 bits (55), Expect = 1e-20
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                         
Query: 498   tcgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagttt 557
             |||||||||||| ||||||||||| |||||    ||||||||||||||||| ||||  ||
Sbjct: 68457 tcgctcttgaaattggacgctaggtgcatgttgaagttttgaaagattgtccagaatatt 68516

                                                                         
Query: 558   gcttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctac 617
             || | |||| |  |||||||  | || ||||||| |||||||||||||||||| ||| ||
Sbjct: 68517 gcattttatttcctccagttgcttgtttgtatttctgttctccatgttacttgctgcaac 68576

                                                        
Query: 618   atgaagagtgtaatctggaccaaagtattcatagtactcattg 660
              | |||| |||| ||||||||||| |||||||| |||||||||
Sbjct: 68577 gtaaagactgtattctggaccaaaatattcataatactcattg 68619



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 585   tgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagta 644
             ||||||| |||||||||||||||||| ||| || | |||| |||| ||||||||||| ||
Sbjct: 91147 tgtatttctgttctccatgttacttgctgcaacgtaaagactgtattctggaccaaaata 91088

                         
Query: 645   ttcatagtactc 656
             |||||| |||||
Sbjct: 91087 ttcataatactc 91076



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 439   tgcctttcatcctgatcctcttcatcttcatccggct 475
             |||||||||||  ||||||||| ||||||||| ||||
Sbjct: 68289 tgcctttcatctggatcctcttgatcttcatctggct 68325



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 265   tctgccataggttctggtcctctatgttc 293
             |||||||| |||||||||||| |||||||
Sbjct: 66323 tctgccatcggttctggtcctttatgttc 66351

---

>gb|AF332875.1|AF332875 Oryza sativa histone deacetylase HD1 mRNA, complete cds
          Length = 1579

 Score =  101 bits (51), Expect = 3e-18
 Identities = 224/281 (79%), Gaps = 3/281 (1%)
 Strand = Plus / Minus

                                                                        
Query: 379  cttgctgagtcttccaaaggtgtgtgataatccatttccatgtcagaatcagggccatca 438
            |||||||||| | ||| |||| |||||| ||||| | |||| ||||| ||||||   || 
Sbjct: 1316 cttgctgagtgtcccataggtttgtgatcatccaataccatatcagagtcaggg---tcg 1260

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  ||||||||| ||||||||| |||||||| ||||  || ||||||  |
Sbjct: 1259 tgcctttcatctggatcctcttgatcttcatctggctcaggtaactttgtttcaggaatt 1200

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    ||||||||||||||||| ||||  |||
Sbjct: 1199 cgctcttcaaattggacactaggagcatgttgaagttttgaaagattgtccagaatgttg 1140

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | ||  |||||| |||||||||||||||||| ||| || 
Sbjct: 1139 cattttatttcctccaattgcttgttggtatttctgttctccatgttacttgctgcaacg 1080

                                                     
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactcatt 659
              |||| |||| ||||||||||| || ||| | ||||||||
Sbjct: 1079 aaaagactgtattctggaccaaaatactcaaaatactcatt 1039



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 265  tctgccataggttctggtcctctatgttcacctgttactctgctaccatcctgatcttt 323
            |||||||| |||||||||||| ||||||||  ||| | |||  |||||| |||||||||
Sbjct: 1427 tctgccatcggttctggtcctttatgttcagttgtcaatctcttaccatgctgatcttt 1369

---

>ref|XM_464641.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1943

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 175/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  |||| |||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1398 tgcctttcatctggatcatcttgatcttcatctggctcaggtagctttgtttcaggaatt 1339

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    |||||||| |||||||| ||||  |||
Sbjct: 1338 cgctcttcaaattggacactaggagcatgttgaagttttgagagattgtccagaatgttg 1279

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1278 cattttatttcctccaattgcttgtttgtatttctgttctccatgttacttgctgcaacg 1219

                                                  
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactc 656
            | |||| |||| ||||||||||| |||||||| |||||
Sbjct: 1218 taaagactgtattctggaccaaaatattcataatactc 1181

---

>ref|XM_464643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 175/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  |||| |||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1231 tgcctttcatctggatcatcttgatcttcatctggctcaggtagctttgtttcaggaatt 1172

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    |||||||| |||||||| ||||  |||
Sbjct: 1171 cgctcttcaaattggacactaggagcatgttgaagttttgagagattgtccagaatgttg 1112

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1111 cattttatttcctccaattgcttgtttgtatttctgttctccatgttacttgctgcaacg 1052

                                                  
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactc 656
            | |||| |||| ||||||||||| |||||||| |||||
Sbjct: 1051 taaagactgtattctggaccaaaatattcataatactc 1014

---

>gb|AF513383.1| Oryza sativa (japonica cultivar-group) histone deacetylase HDAC2
            mRNA, complete cds; alternatively spliced
          Length = 1703

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 175/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  |||| |||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1393 tgcctttcatctggatcatcttgatcttcatctggctcaggtagctttgtttcaggaatt 1334

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    |||||||| |||||||| ||||  |||
Sbjct: 1333 cgctcttcaaattggacactaggagcatgttgaagttttgagagattgtccagaatgttg 1274

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1273 cattttatttcctccaattgcttgtttgtatttctgttctccatgttacttgctgcaacg 1214

                                                  
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactc 656
            | |||| |||| ||||||||||| |||||||| |||||
Sbjct: 1213 taaagactgtattctggaccaaaatattcataatactc 1176

---

>dbj|AK103097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118M13, full
            insert sequence
          Length = 1942

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 175/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  |||| |||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1397 tgcctttcatctggatcatcttgatcttcatctggctcaggtagctttgtttcaggaatt 1338

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    |||||||| |||||||| ||||  |||
Sbjct: 1337 cgctcttcaaattggacactaggagcatgttgaagttttgagagattgtccagaatgttg 1278

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1277 cattttatttcctccaattgcttgtttgtatttctgttctccatgttacttgctgcaacg 1218

                                                  
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactc 656
            | |||| |||| ||||||||||| |||||||| |||||
Sbjct: 1217 taaagactgtattctggaccaaaatattcataatactc 1180

---

>dbj|AK064000.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F07, full
            insert sequence
          Length = 1929

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 175/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  tgcctttcatcctgatcctcttcatcttcatccggctcagggaactcagtatcaggaggt 498
            |||||||||||  |||| |||| ||||||||| |||||||| | ||  || ||||||  |
Sbjct: 1231 tgcctttcatctggatcatcttgatcttcatctggctcaggtagctttgtttcaggaatt 1172

                                                                        
Query: 499  cgctcttgaaactggacgctaggggcatgcctgagttttgaaagattgtcaagaagtttg 558
            ||||||| ||| ||||| ||||| |||||    |||||||| |||||||| ||||  |||
Sbjct: 1171 cgctcttcaaattggacactaggagcatgttgaagttttgagagattgtccagaatgttg 1112

                                                                        
Query: 559  cttcttatattatccagttcgtagtgtgtatttttgttctccatgttacttggtgctaca 618
            | | |||| |  |||| ||  | || ||||||| |||||||||||||||||| ||| || 
Sbjct: 1111 cattttatttcctccaattgcttgtttgtatttctgttctccatgttacttgctgcaacg 1052

                                                  
Query: 619  tgaagagtgtaatctggaccaaagtattcatagtactc 656
            | |||| |||| ||||||||||| |||||||| |||||
Sbjct: 1051 taaagactgtattctggaccaaaatattcataatactc 1014

---

>gb|BT013616.1| Lycopersicon esculentum clone 132417F, mRNA sequence
          Length = 1922

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 588  atttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattc 647
            |||||||||||||||||||||||| || ||||| |  || ||||||||||||||||||||
Sbjct: 1214 atttttgttctccatgttacttggagcgacatgcaaggtataatctggaccaaagtattc 1155

               
Query: 648  ata 650
            |||
Sbjct: 1154 ata 1152



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 453  atcctcttcatcttcatccggctcagggaactcagtatcaggaggtcgctcttgaaactg 512
            |||||||  ||||||||| | |||||| || |||||||| || |||||||| || |||||
Sbjct: 1349 atcctctagatcttcatcagcctcaggcaattcagtatccggtggtcgctcctggaactg 1290

                                                   
Query: 513  gacgctaggggcatgcctgagttttgaaagattgtcaag 551
             || || |||||||||   || ||||||||||| |||||
Sbjct: 1289 cacacttggggcatgctgaagctttgaaagattatcaag 1251

---

>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete
             sequence
          Length = 100991

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                         
Query: 586   gtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtat 645
             ||||||||||| |||||||||||||| || |||||||| || ||||||||||| || |||
Sbjct: 16588 gtatttttgttttccatgttacttggggcaacatgaagggtataatctggaccgaaatat 16647

                        
Query: 646   tcatagtactc 656
             ||||| |||||
Sbjct: 16648 tcataatactc 16658

---

>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence
          Length = 100985

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                         
Query: 586   gtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtat 645
             ||||||||||| |||||||||||||| || |||||||| || ||||||||||| || |||
Sbjct: 16583 gtatttttgttttccatgttacttggggcaacatgaagggtataatctggaccgaaatat 16642

                        
Query: 646   tcatagtactc 656
             ||||| |||||
Sbjct: 16643 tcataatactc 16653

---

>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:B1307A11
          Length = 131538

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 585  tgtatttttgttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagta 644
            ||||||| |||||||||||||||||| ||| || | |||| |||| ||||||||||| ||
Sbjct: 9767 tgtatttctgttctccatgttacttgctgcaacgtaaagactgtattctggaccaaaata 9708

                        
Query: 645  ttcatagtactc 656
            |||||| |||||
Sbjct: 9707 ttcataatactc 9696

---

>ref|NM_119974.2| Arabidopsis thaliana HD1; histone deacetylase AT4G38130 (HD1) mRNA,
            complete cds
          Length = 1889

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1258 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1206

---

>gb|BT008873.1| Arabidopsis thaliana At4g38130 mRNA, complete cds
          Length = 1506

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1076 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1024

---

>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 6708 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 6760

---

>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 598   tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
             |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 85786 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 85838

---

>gb|AY093153.1| Arabidopsis thaliana histone deacetylase (At4g38130) mRNA, complete
            cds
          Length = 1845

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1237 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1185

---

>emb|BX827687.1|CNS0A3TR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH10ZC07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1829

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1236 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1184

---

>emb|BX827416.1|CNS0A2E5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS52ZA01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1824

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1238 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1186

---

>gb|AF195547.1|AF195547 Arabidopsis thaliana putative histone deacetylase (RPD3A) mRNA,
            complete cds
          Length = 1807

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1217 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1165

---

>gb|AF014824.1|AF014824 Arabidopsis thaliana histone deacetylase mRNA, complete cds
          Length = 1808

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 598  tccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcata 650
            |||||||||||||| || || ||||| || || ||||||||||||||||||||
Sbjct: 1218 tccatgttacttggagcaacgtgaagtgtatagtctggaccaaagtattcata 1166

---

>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172,
            complete sequence
          Length = 127731

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 594  gttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcatagta 653
            |||||||||||| |||||  | ||||| ||||| |||||||| ||||| || ||||||||
Sbjct: 6804 gttctccatgttgcttggatcaacatggagagtataatctgggccaaaatactcatagta 6863

                   
Query: 654  ctcattg 660
             ||||||
Sbjct: 6864 ttcattg 6870



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 594   gttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcatagta 653
             |||||||||||| |||||  | ||||||||||| |||||||| ||||| || ||||| ||
Sbjct: 38596 gttctccatgttgcttggatcgacatgaagagtataatctgggccaaaatactcataata 38655

                   
Query: 654   ctcatt 659
              |||||
Sbjct: 38656 ttcatt 38661

---

>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
          Length = 122251

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 594   gttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcatagta 653
             ||||||||||||  ||||| | |||||||| || || ||||| ||||| |||||||| ||
Sbjct: 68411 gttctccatgttgtttggttcgacatgaagtgtatagtctgggccaaaatattcataata 68470

                   
Query: 654   ctcatt 659
             ||||||
Sbjct: 68471 ctcatt 68476

---

>gb|AC140849.8| Medicago truncatula clone mth2-17f20, complete sequence
          Length = 136131

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 594  gttctccatgttacttggtgctacatgaagagtgtaatctggaccaaagtattcatagta 653
            ||||||||||||  ||||| | |||||||| || || ||||| ||||| |||||||| ||
Sbjct: 1768 gttctccatgttgtttggttcgacatgaagtgtatagtctgggccaaaatattcataata 1709

                  
Query: 654  ctcatt 659
            ||||||
Sbjct: 1708 ctcatt 1703

---

>ref|XR_002514.1| PREDICTED: Mus musculus similar to paired-Ig-like receptor A1
           (LOC619608), mRNA
          Length = 1353

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 444 ttcatcctgatcctcttcatcttcatc 470
           ||||||||| |||||||||||||||||
Sbjct: 659 ttcatcctgttcctcttcatcttcatc 685

---

>ref|XM_815649.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510275.370) partial mRNA
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 442 ctttcatcctgatcctcttcatc 464
           |||||||||||||||||||||||
Sbjct: 317 ctttcatcctgatcctcttcatc 295

---

>gb|AC130680.13| Mus musculus chromosome 7, clone RP23-180G17, complete sequence
          Length = 136680

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 444    ttcatcctgatcctcttcatcttcatc 470
              ||||||||| |||||||||||||||||
Sbjct: 131591 ttcatcctgttcctcttcatcttcatc 131565

---

>dbj|AK142375.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
            library, clone:D430026N17 product:paired-Ig-like receptor
            B, full insert sequence
          Length = 2708

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 1979 ttcatcctgttcctcttcatcttcatc 2005

---

>dbj|AK161081.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732406L18 product:paired-Ig-like receptor
            B, full insert sequence
          Length = 3795

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 1978 ttcatcctgttcctcttcatcttcatc 2004

---

>dbj|AK152232.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830057E12 product:paired-Ig-like receptor
            B, full insert sequence
          Length = 2899

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 2210 ttcatcctgttcctcttcatcttcatc 2236

---

>dbj|AK153116.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830123I03 product:paired-Ig-like receptor
            B, full insert sequence
          Length = 2899

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 2210 ttcatcctgttcctcttcatcttcatc 2236

---

>dbj|AK165255.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
            library, clone:F430004E03 product:paired-Ig-like receptor
            B, full insert sequence
          Length = 2126

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 2007 ttcatcctgttcctcttcatcttcatc 2033

---

>dbj|AK170720.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630116D11
            product:paired-Ig-like receptor B, full insert sequence
          Length = 3324

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 2626 ttcatcctgttcctcttcatcttcatc 2652

---

>dbj|AK170618.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630110L20
            product:paired-Ig-like receptor B, full insert sequence
          Length = 2361

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 2242 ttcatcctgttcctcttcatcttcatc 2268

---

>gb|AF148880.1|AF148880 Mus musculus strain C57BL/6J paired immunoglobulin-like receptor B
            (Pirb) mRNA, partial cds
          Length = 2087

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 1958 ttcatcctgttcctcttcatcttcatc 1984

---

>gb|AC171680.5| Mus musculus chromosome 7, clone RP23-146B24, complete sequence
          Length = 200031

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 444    ttcatcctgatcctcttcatcttcatc 470
              ||||||||| |||||||||||||||||
Sbjct: 127992 ttcatcctgttcctcttcatcttcatc 127966

---

>gb|U83172.1|MMU83172 Mus musculus cell-surface glycoprotein p91 mRNA, complete cds
          Length = 2693

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 444  ttcatcctgatcctcttcatcttcatc 470
            ||||||||| |||||||||||||||||
Sbjct: 1951 ttcatcctgttcctcttcatcttcatc 1977

---

>gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromosome 7, complete
              sequence
          Length = 163934

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 338    ctgattctctcttaactcttgcaccttgaa 367
              |||||||| ||||||||||| |||||||||
Sbjct: 142340 ctgattctttcttaactcttacaccttgaa 142369

---

>ref|XM_756778.1| Ustilago maydis 521 hypothetical protein (UM05724.1) partial mRNA
          Length = 1218

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 232 tcgagatgagcttgcttagatg 253
           ||||||||||||||||||||||
Sbjct: 680 tcgagatgagcttgcttagatg 659

---

>gb|AC006455.2| Homo sapiens PAC clone RP5-905H7 from 7, complete sequence
          Length = 139384

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 338   ctgattctctcttaactcttgcaccttgaa 367
             |||||||| ||||||||||| |||||||||
Sbjct: 21539 ctgattctttcttaactcttacaccttgaa 21568

---

>gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromosome 7, complete
             sequence
          Length = 156146

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 338   ctgattctctcttaactcttgcaccttgaa 367
             |||||||| ||||||||||| |||||||||
Sbjct: 96304 ctgattctttcttaactcttacaccttgaa 96275

---

>gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromosome 7, complete
              sequence
          Length = 168496

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 338    ctgattctctcttaactcttgcaccttgaa 367
              |||||||| ||||||||||| |||||||||
Sbjct: 124885 ctgattctttcttaactcttacaccttgaa 124856

---

>gb|AC134619.2| Homo sapiens BAC clone RP11-1367K15 from 7, complete sequence
          Length = 225116

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 338    ctgattctctcttaactcttgcaccttgaa 367
              |||||||| ||||||||||| |||||||||
Sbjct: 200763 ctgattctttcttaactcttacaccttgaa 200734

---

>gb|AC127700.2| Homo sapiens PAC clone RP5-1012J16 from 7, complete sequence
          Length = 98321

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 338   ctgattctctcttaactcttgcaccttgaa 367
             |||||||| ||||||||||| |||||||||
Sbjct: 55203 ctgattctttcttaactcttacaccttgaa 55174

---

>gb|AC156592.2| Laccaria bicolor clone JGIAHZW-10X, complete sequence
          Length = 37070

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 450   ctgatcctcttcatcttcatcc 471
             ||||||||||||||||||||||
Sbjct: 21695 ctgatcctcttcatcttcatcc 21674

---

>ref|XM_815988.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510279.140) partial mRNA
          Length = 1080

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 444 ttcatcctgatcctcttcatc 464
           |||||||||||||||||||||
Sbjct: 279 ttcatcctgatcctcttcatc 259

---

>gb|AC068075.16| Homo sapiens chromosome 8, clone RP11-756K15, complete sequence
          Length = 150900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   tgtttcagctccagctgattc 344
             |||||||||||||||||||||
Sbjct: 44279 tgtttcagctccagctgattc 44259

---

>gb|AC139147.2| Homo sapiens chromosome 15, clone RP11-107D24, complete sequence
          Length = 124401

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   cctctatgttcacctgttact 303
             |||||||||||||||||||||
Sbjct: 49756 cctctatgttcacctgttact 49776

---

>gb|AC004025.1|AC004025 Homo sapiens Xp22 BAC GS-321G17 (Genome Systems Human BAC library)
             complete sequence
          Length = 188730

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   ggttctggtcctctatgttca 294
             |||||||||||||||||||||
Sbjct: 91655 ggttctggtcctctatgttca 91635

---

>gb|BC088829.1| Homo sapiens mitogen-activated protein kinase kinase kinase 5, mRNA
            (cDNA clone MGC:87795 IMAGE:6007002), complete cds
          Length = 4632

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3718 tcgacagccatggcattagc 3737

---

>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence
          Length = 258544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    tgatcctcttcatcttcatc 470
              ||||||||||||||||||||
Sbjct: 237610 tgatcctcttcatcttcatc 237629

---

>ref|XM_481792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 628  taatctggaccaaagtattcatagtactcatt 659
            ||||| ||||||||||| |||||||| |||||
Sbjct: 1133 taatcaggaccaaagtactcatagtagtcatt 1102

---

>ref|NM_001009194.1| Ovis aries aquaporin 1 (AQP1), mRNA
          Length = 823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 66  tgatcctcttcatcttcatc 85

---

>ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 4 (UBTF), mRNA
          Length = 3212

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  ttcatcctgatcctcttcatcttcatcc 471
            |||||||| |||||||||||| ||||||
Sbjct: 2349 ttcatcctcatcctcttcatcatcatcc 2322

---

>ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 1 (UBTF), mRNA
          Length = 2895

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  ttcatcctgatcctcttcatcttcatcc 471
            |||||||| |||||||||||| ||||||
Sbjct: 2032 ttcatcctcatcctcttcatcatcatcc 2005

---

>ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA
            polymerase I, transcript variant 2 (UBTF), mRNA
          Length = 3218

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  ttcatcctgatcctcttcatcttcatcc 471
            |||||||| |||||||||||| ||||||
Sbjct: 2355 ttcatcctcatcctcttcatcatcatcc 2328

---

>ref|XM_418846.1| PREDICTED: Gallus gallus similar to velo1 (LOC420748), mRNA
          Length = 3184

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 448  tcctgatcctcttcatcttcatcc 471
            |||| |||||||||||||||||||
Sbjct: 2324 tcctcatcctcttcatcttcatcc 2301

---

>gb|BT025412.1| Bos taurus aquaporin 1 (Colton blood group) (AQP1), mRNA, complete
           cds
          Length = 2695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 104 tgatcctcttcatcttcatc 123

---

>ref|NM_004964.2| Homo sapiens histone deacetylase 1 (HDAC1), mRNA
          Length = 2091

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1084 aatctggtccaaagtattcaaagtagtcattg 1053

---

>gb|BC054503.2| Homo sapiens mitogen-activated protein kinase kinase kinase 5, mRNA
            (cDNA clone MGC:60047 IMAGE:6143181), complete cds
          Length = 4578

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3664 tcgacagccatggcattagc 3683

---

>ref|XM_954077.1| Neurospora crassa OR74A hypothetical protein (NCU09226.1) partial
           mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 catcctgatcctcttcatcttcat 469
           |||||||||| |||||||||||||
Sbjct: 820 catcctgatcatcttcatcttcat 797

---

>gb|BC000301.2| Homo sapiens histone deacetylase 1, mRNA (cDNA clone MGC:8378
            IMAGE:2820260), complete cds
          Length = 2084

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1055 aatctggtccaaagtattcaaagtagtcattg 1024

---

>ref|XM_331617.1| Neurospora crassa OR74A hypothetical protein (NCU09226.1) partial
           mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 446 catcctgatcctcttcatcttcat 469
           |||||||||| |||||||||||||
Sbjct: 820 catcctgatcatcttcatcttcat 797

---

>gb|AY627042.1| Homo sapiens histone deacetylase 1 mRNA, complete cds
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1028 aatctggtccaaagtattcaaagtagtcattg 997

---

>ref|XM_453161.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D02090g predicted mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 447  atcctgatcctcttcatcttcatc 470
            ||||| ||||||||||||||||||
Sbjct: 1209 atcctcatcctcttcatcttcatc 1186

---

>ref|XM_989314.1| PREDICTED: Mus musculus similar to histone deacetylase 1
           (LOC634881), mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 454 aatctggtccaaagtattcaaagtagtcattg 423

---

>ref|XM_973543.1| PREDICTED: Mus musculus similar to histone deacetylase 1
           (LOC634881), mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 454 aatctggtccaaagtattcaaagtagtcattg 423

---

>ref|XM_909745.2| PREDICTED: Mus musculus similar to histone deacetylase 1
           (LOC634881), mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 454 aatctggtccaaagtattcaaagtagtcattg 423

---

>gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, complete sequence
          Length = 192713

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    aggtgtgtgataatccattt 415
              ||||||||||||||||||||
Sbjct: 133754 aggtgtgtgataatccattt 133735

---

>ref|XM_859623.1| PREDICTED: Canis familiaris similar to histone deacetylase 1,
            transcript variant 5 (LOC487309), mRNA
          Length = 2393

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1177 aatctggtccaaagtattcaaagtagtcattg 1146

---

>ref|XM_859607.1| PREDICTED: Canis familiaris similar to histone deacetylase 1,
           transcript variant 4 (LOC487309), mRNA
          Length = 2000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 784 aatctggtccaaagtattcaaagtagtcattg 753

---

>ref|XM_544435.2| PREDICTED: Canis familiaris similar to histone deacetylase 1,
            transcript variant 1 (LOC487309), mRNA
          Length = 2468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1252 aatctggtccaaagtattcaaagtagtcattg 1221

---

>gb|AC010125.4| Homo sapiens PAC clone RP5-1075C10 from 7, complete sequence
          Length = 171457

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    gtgataatccatttccatgt 421
              ||||||||||||||||||||
Sbjct: 140800 gtgataatccatttccatgt 140781

---

>gb|AC145819.1| Pan troglodytes BAC clone RP43-99J22 from 7, complete sequence
          Length = 159950

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gtgataatccatttccatgt 421
              ||||||||||||||||||||
Sbjct: 108229 gtgataatccatttccatgt 108248

---

>emb|AL596275.10| Human DNA sequence from clone RP11-183G22 on chromosome 1 Contains a
              ribosomal protein S2 (RPS2) pseudogene, a high-mobility
              group box 1 (HMGB1) pseudogene and a chromosome 14 open
              reading frame 111 (C14orf111) pseudogene, complete sequence
          Length = 139273

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    tcctgatcctcttcatcttc 467
              ||||||||||||||||||||
Sbjct: 125775 tcctgatcctcttcatcttc 125794

---

>ref|XM_501728.1| Yarrowia lipolytica CLIB122, YALI0C11561g predicted mRNA
          Length = 2943

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 gatcctcttcatcttcatcc 471
           ||||||||||||||||||||
Sbjct: 280 gatcctcttcatcttcatcc 261

---

>emb|AL109945.15|HSJ811H24 Human DNA sequence from clone RP4-811H24 on chromosome 1p34.1-34.3
             Contains the 3' end of LCK gene for lymphocyte-specific
             protein tyrosine kinase, HDAC1 gene for histone
             deacetylase 1, the MLP gene for MARCKS-like protein,
             STK22C gene for serine/threonine kinase 22C
             (spermiogenesis associated), a novel gene (FLJ43105), five
             novel genes and four CpG islands, complete sequence
          Length = 110526

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 629   aatctggaccaaagtattcatagtactcattg 660
             ||||||| |||||||||||| |||| ||||||
Sbjct: 47572 aatctggtccaaagtattcaaagtagtcattg 47541

---

>emb|AL024508.1|HS325F22 Human DNA sequence from clone RP3-325F22 on chromosome 6q23.1-24.3
             Contains the 3' end of the MAP3K5 gene for
             mitogen-activated protein kinase kinase kinase 5 (ASK1,
             MEKK5, MAPKKK5), a novel gene and a CpG island, complete
             sequence
          Length = 154788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tcgacagccatggcattagc 230
             ||||||||||||||||||||
Sbjct: 54253 tcgacagccatggcattagc 54234

---

>ref|XM_963953.1| PREDICTED: Tribolium castaneum similar to CG4051-PA (LOC657496), mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 447  atcctgatcctcttcatcttcatc 470
            |||||||||||| |||||||||||
Sbjct: 2238 atcctgatcctcatcatcttcatc 2215

---

>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 447    atcctgatcctcttcatcttcatc 470
              ||||| ||||||||||||||||||
Sbjct: 180088 atcctcatcctcttcatcttcatc 180065

---

>gb|BT007472.1| Synthetic construct Homo sapiens histone deacetylase 1 mRNA, partial
            cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>gb|BC097943.1| Rattus norvegicus histone deacetylase 1 (predicted), mRNA (cDNA clone
            MGC:116064 IMAGE:7458532), complete cds
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1039 aatctggtccaaagtattcaaagtagtcattg 1008

---

>ref|NM_001025409.1| Rattus norvegicus histone deacetylase 1 (predicted)
            (Hdac1_predicted), mRNA
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1039 aatctggtccaaagtattcaaagtagtcattg 1008

---

>emb|CR859057.1| Pongo pygmaeus mRNA; cDNA DKFZp468K082 (from clone DKFZp468K082)
          Length = 2066

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1042 aatctggtccaaagtattcaaagtagtcattg 1011

---

>emb|CR616540.1| full-length cDNA clone CS0DI031YC03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1623

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 643 aatctggtccaaagtattcaaagtagtcattg 612

---

>emb|CR611580.1| full-length cDNA clone CS0DA011YG11 of Neuroblastoma of Homo sapiens
            (human)
          Length = 2042

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1056 aatctggtccaaagtattcaaagtagtcattg 1025

---

>emb|CR604646.1| full-length cDNA clone CS0DB009YN22 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1360

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 367 aatctggtccaaagtattcaaagtagtcattg 336

---

>dbj|D84476.2| Homo sapiens ASK1 mRNA for apoptosis signal-regulating kinase 1,
            complete cds
          Length = 4522

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3623 tcgacagccatggcattagc 3642

---

>ref|NM_174702.3| Bos taurus aquaporin 1 (Aqp1), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 78  tgatcctcttcatcttcatc 97

---

>gb|AF009037.1|AF009037 Ovis aries aquaporin 1 (aqp1) mRNA, complete cds
          Length = 823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 66  tgatcctcttcatcttcatc 85

---

>gb|BC105525.1| Bos taurus aquaporin 1, mRNA (cDNA clone MGC:129064 IMAGE:8121557),
           complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 78  tgatcctcttcatcttcatc 97

---

>ref|XM_688693.1| PREDICTED: Danio rerio similar to Tripartite motif protein 25 (Zinc
            finger protein 147) (Estrogen responsive finger protein)
            (Efp) (RING finger protein 147) (LOC565414), mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  ttcatcctgatcctcttcatcttcatcc 471
            |||||||| |||||| ||||||||||||
Sbjct: 1206 ttcatcctcatcctcctcatcttcatcc 1179

---

>emb|CR541717.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0629D for
            gene HDAC1, histone deacetylase 1; complete cds, incl.
            stopcodon
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>emb|BX649490.11| Zebrafish DNA sequence from clone DKEY-103K4 in linkage group 22,
              complete sequence
          Length = 150534

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 444    ttcatcctgatcctcttcatcttcatcc 471
              |||||||| |||||||||||| ||||||
Sbjct: 142776 ttcatcctcatcctcttcatcctcatcc 142803

---

>gb|S74759.1|S74759S1 water channel protein CHIP29 [cattle, ocular ciliary epithelium,
           mRNA, 1211 nt, segment 1 of 2]
          Length = 1211

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 94  tgatcctcttcatcttcatc 113

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 628      taatctggaccaaagtattcatagtactcatt 659
                ||||| ||||||||||| |||||||| |||||
Sbjct: 15550122 taatcaggaccaaagtactcatagtagtcatt 15550091

---

>gb|AF321129.1|AF321129 Rattus norvegicus histone deacetylase 1 (HdaC1) mRNA, partial cds
          Length = 768

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 629 aatctggaccaaagtattcatagtactcattg 660
           ||||||| |||||||||||| |||| ||||||
Sbjct: 349 aatctggtccaaagtattcaaagtagtcattg 318

---

>dbj|D50405.1| Homo sapiens mRNA for RPD3 protein, complete cds
          Length = 2091

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1084 aatctggtccaaagtattcaaagtagtcattg 1053

---

>ref|NM_005923.3| Homo sapiens mitogen-activated protein kinase kinase kinase 5
            (MAP3K5), mRNA
          Length = 5215

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3717 tcgacagccatggcattagc 3736

---

>ref|XM_576595.1| PREDICTED: Rattus norvegicus histone deacetylase 1 (Hdac1), mRNA
          Length = 1999

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1045 aatctggtccaaagtattcaaagtagtcattg 1014

---

>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence
          Length = 111845

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   aggtgtgtgataatccattt 415
             ||||||||||||||||||||
Sbjct: 21505 aggtgtgtgataatccattt 21486

---

>gb|BC059156.1| Rattus norvegicus histone deacetylase 1 (predicted), mRNA (cDNA clone
            IMAGE:6921765)
          Length = 1385

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1056 aatctggtccaaagtattcaaagtagtcattg 1025

---

>gb|AY891420.1| Synthetic construct Homo sapiens clone FLH014187.01L histone
            deacetylase 1 (HDAC1) mRNA, partial cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>emb|BX648622.1|HSM808773 Homo sapiens mRNA; cDNA DKFZp686O01235 (from clone DKFZp686O01235)
          Length = 4052

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1032 aatctggtccaaagtattcaaagtagtcattg 1063

---

>gb|AY890400.1| Synthetic construct Homo sapiens clone FLH018878.01X histone
            deacetylase 1 (HDAC1) mRNA, complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_B10
          Length = 148508

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 628   taatctggaccaaagtattcatagtactcatt 659
             ||||| ||||||||||| |||||||| |||||
Sbjct: 97880 taatcaggaccaaagtactcatagtagtcatt 97849

---

>dbj|AK111861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027M14, full
            insert sequence
          Length = 1857

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 628  taatctggaccaaagtattcatagtactcatt 659
            ||||| ||||||||||| |||||||| |||||
Sbjct: 1133 taatcaggaccaaagtactcatagtagtcatt 1102

---

>gb|AY893466.1| Synthetic construct Homo sapiens clone FLH127843.01X histone
            deacetylase 1 (HDAC1) mRNA, complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>gb|AY893265.1| Synthetic construct Homo sapiens clone FLH130972.01X histone
            deacetylase 1 (HDAC1) mRNA, complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1021 aatctggtccaaagtattcaaagtagtcattg 990

---

>gb|AC005095.2|AC005095 Homo sapiens BAC clone CTA-332P12 from 7q22-q31.1, complete sequence
          Length = 119937

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 386    agtcttccaaaggtgtgtgataat 409
              |||||| |||||||||||||||||
Sbjct: 114860 agtcttacaaaggtgtgtgataat 114837

---

>emb|AL772289.10| Zebrafish DNA sequence from clone CH211-8A9 in linkage group 13,
             complete sequence
          Length = 168459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   gggccatcatgcctttcatc 449
             ||||||||||||||||||||
Sbjct: 78894 gggccatcatgcctttcatc 78913

---

>emb|BX000465.12| Zebrafish DNA sequence from clone DKEY-30A6 in linkage group 22, complete
              sequence
          Length = 214999

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 444    ttcatcctgatcctcttcatcttcatcc 471
              |||||||| |||||||||||| ||||||
Sbjct: 134073 ttcatcctcatcctcttcatcctcatcc 134100

---

>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence
          Length = 195034

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    ttttgttctccatgttactt 609
              ||||||||||||||||||||
Sbjct: 132605 ttttgttctccatgttactt 132586

---

>dbj|AK112923.1| Ciona intestinalis cDNA, clone:ciad027n15, full insert sequence
          Length = 1060

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 448 tcctgatcctcttcatcttcatcc 471
           |||| |||||||||||||||||||
Sbjct: 637 tcctcatcctcttcatcttcatcc 614

---

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     tccagctgattctctcttaa 352
               ||||||||||||||||||||
Sbjct: 2914050 tccagctgattctctcttaa 2914069

---

>gb|U67156.1|HSU67156 Human mitogen-activated kinase kinase kinase 5 (MAPKKK5) mRNA,
            complete cds
          Length = 5236

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3716 tcgacagccatggcattagc 3735

---

>gb|U50079.1|HSU50079 Human histone deacetylase HD1 mRNA, complete cds
          Length = 1611

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1131 aatctggtccaaagtattcaaagtagtcattg 1100

---

>gb|BC107476.1| Rattus norvegicus histone deacetylase 1 (predicted), mRNA (cDNA clone
            MGC:125110 IMAGE:7443793), complete cds
          Length = 2033

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 629  aatctggaccaaagtattcatagtactcattg 660
            ||||||| |||||||||||| |||| ||||||
Sbjct: 1036 aatctggtccaaagtattcaaagtagtcattg 1005

---

>gb|AF028005.1|AF028005 Bos taurus water channel protein CHIP29 mRNA, complete cds
          Length = 826

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgatcctcttcatcttcatc 470
           ||||||||||||||||||||
Sbjct: 72  tgatcctcttcatcttcatc 91

---

>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 452     gatcctcttcatcttcatcc 471
               ||||||||||||||||||||
Sbjct: 1599678 gatcctcttcatcttcatcc 1599659

---

>dbj|AB209093.1| Homo sapiens mRNA for mitogen-activated protein kinase kinase kinase
            5 variant protein
          Length = 4723

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tcgacagccatggcattagc 230
            ||||||||||||||||||||
Sbjct: 3824 tcgacagccatggcattagc 3843

---

>emb|AL732412.8| Mouse DNA sequence from clone RP23-114P13 on chromosome X, complete
              sequence
          Length = 142781

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 629    aatctggaccaaagtattcatagtactcattg 660
              ||||||| |||||||||||| |||| ||||||
Sbjct: 126450 aatctggtccaaagtattcaaagtagtcattg 126419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,389,497
Number of Sequences: 3902068
Number of extensions: 6389497
Number of successful extensions: 130554
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130110
Number of HSP's gapped (non-prelim): 422
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---