ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23h12 |
|---|---|
| Clone Library Name | barley_pub |
>EXO70_YEAST (P19658) Exocyst complex component EXO70 (Exocyst complex protein| of 70 kDa) Length = 623 Score = 36.6 bits (83), Expect(2) = 2e-04 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = -1 Query: 587 WRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDV 432 +++ DP L+ LK I V+P Y F R++ + R K+IKY P+++ Sbjct: 566 YKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDSFKNPR---KHIKYTPDEL 614 Score = 27.7 bits (60), Expect(2) = 2e-04 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -3 Query: 681 TGSSSALKAALKERFKSFNLAYEEVIQDTDSMEGCGSSVK 562 +G S K +KE+F+ FN +E+++ T + S+K Sbjct: 535 SGKKSKDKEQIKEKFRKFNEGFEDLVSKTKQYKLSDPSLK 574
>EXO70_CANGA (Q6FJW2) Exocyst complex protein EXO70| Length = 623 Score = 42.4 bits (98), Expect = 0.002 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = -1 Query: 587 WRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVS 417 +++ DP L+ LK I ++P Y F GR++ + R K+IKY P+D+ N +S Sbjct: 566 YKLSDPALKRLLKSEIVALLMPMYDRFYGRYKDSFKNPR---KHIKYTPDDITNVIS 619
>EXOC7_HUMAN (Q9UPT5) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 735 Score = 37.4 bits (85), Expect(2) = 0.005 Identities = 20/69 (28%), Positives = 36/69 (52%) Frame = -1 Query: 611 KLYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDV 432 +L + Q AW + D + R+ ++ + V Y +F+ +F G + +N KYIKY E V Sbjct: 665 ELCKIQKAWAIPDTEQRDRIRQAQKTIVKETYGAFLQKF-GSVPFTKNPEKYIKYGVEQV 723 Query: 431 ENQVSDFFE 405 + + F+ Sbjct: 724 GDMIDRLFD 732 Score = 22.3 bits (46), Expect(2) = 0.005 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 651 LKERFKSFNLAYEEV 607 +KERFK FN EE+ Sbjct: 652 IKERFKGFNDGLEEL 666
>EXOC7_MOUSE (O35250) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 697 Score = 37.4 bits (85), Expect(2) = 0.005 Identities = 19/69 (27%), Positives = 37/69 (53%) Frame = -1 Query: 611 KLYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDV 432 +L + Q W + D + R++++ + + V Y +F+ R+ G + +N KYIKY E V Sbjct: 627 ELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRY-GSVPFTKNPEKYIKYRVEQV 685 Query: 431 ENQVSDFFE 405 + + F+ Sbjct: 686 GDMIDRLFD 694 Score = 22.3 bits (46), Expect(2) = 0.005 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -3 Query: 651 LKERFKSFNLAYEEV 607 +KERFK FN EE+ Sbjct: 614 IKERFKGFNDGLEEL 628
>EXO70_ASHGO (Q754H0) Exocyst complex protein EXO70| Length = 614 Score = 35.8 bits (81), Expect(2) = 0.005 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = -1 Query: 584 RVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVEN 426 R+ DP +++ LK I V P Y F R++ + R K+IKY P ++ N Sbjct: 558 RITDPAMKKLLKQEIFALVAPMYERFHNRYKDSFKNPR---KHIKYTPNELMN 607 Score = 23.9 bits (50), Expect(2) = 0.005 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = -3 Query: 672 SSALKAALKERFKSFNLAYEEVIQD 598 SS K +KE+F+ FN +E+++ + Sbjct: 529 SSKDKDQVKEKFRKFNEGFEQLVSN 553
>EXO70_KLULA (Q6CK11) Exocyst complex protein EXO70| Length = 619 Score = 38.1 bits (87), Expect = 0.028 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -1 Query: 590 AWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVEN 426 ++R+ DP L++ L+ I VLP Y F R++ + R K+IKY P ++ N Sbjct: 561 SYRISDPALKKILRQEILSLVLPMYERFYNRYKDSFKHPR---KHIKYTPSELMN 612
>EXOC7_RAT (O54922) Exocyst complex component 7 (Exocyst complex component| Exo70) (rExo70) Length = 653 Score = 35.8 bits (81), Expect = 0.14 Identities = 19/69 (27%), Positives = 36/69 (52%) Frame = -1 Query: 611 KLYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDV 432 +L + Q AW + D + R++++ + V Y +F+ R+ + +N KYIKY E V Sbjct: 583 ELCKIQKAWAIPDTEQRDKIRQAQKSIVKETYGAFLHRY-SSVPFTKNPEKYIKYRVEQV 641 Query: 431 ENQVSDFFE 405 + + F+ Sbjct: 642 GDMIDRLFD 650
>EXOC7_DROME (Q9VSJ8) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 693 Score = 33.1 bits (74), Expect = 0.91 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = -1 Query: 602 RTQTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQ 423 + Q + D LRE +K E +LP Y F + G + +N KY+KY ++ Sbjct: 626 KIQRGISIPDVILREGIKRDNVEHILPIYNRFYEIYSG-VHFSKNPDKYVKYRQHEINAM 684 Query: 422 VSDFFE 405 +S F+ Sbjct: 685 LSKLFD 690
>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1268 Score = 32.0 bits (71), Expect = 2.0 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +2 Query: 443 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTPLLTE 571 GCILY L PP FQ + +L+ P +RW S+ ++TE Sbjct: 187 GCILYELAVGTPPFYTTSIFQLVSLILKDP-VRWPSTISVITE 228
>EXO70_DEBHA (Q6BT51) Exocyst complex protein EXO70| Length = 613 Score = 32.0 bits (71), Expect = 2.0 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -1 Query: 602 RTQTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQ 423 R + + D LR L I + ++ AY ++ G E +N AKYIKYN E Sbjct: 550 RNYEKYNITDVNLRAYLSGEIKKLIMNAYFKLYDKY-GSGEFTKNKAKYIKYNKHQFEQI 608 Query: 422 VSD 414 +++ Sbjct: 609 LNE 611
>STK36_PONPY (Q5RAJ5) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 31.6 bits (70), Expect = 2.7 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = +2 Query: 443 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTP---------LLTEDPQ 580 GCILY L PP A FQ + +L+ P +RW S+ LLT+DP+ Sbjct: 187 GCILYELAVGTPPFYATSIFQLVSLILKDP-VRWPSTISPCFKNFLQGLLTKDPR 240
>STK36_HUMAN (Q9NRP7) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 31.6 bits (70), Expect = 2.7 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = +2 Query: 443 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTP---------LLTEDPQ 580 GCILY L PP A FQ + +L+ P +RW S+ LLT+DP+ Sbjct: 187 GCILYELAVGTPPFYATSIFQLVSLILKDP-VRWPSTISPCFKNFLQGLLTKDPR 240
>CD1B1_CAVPO (Q9QZZ2) T-cell surface glycoprotein CD1b1 precursor (CD1-b1| antigen) Length = 333 Score = 31.2 bits (69), Expect = 3.5 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Frame = -3 Query: 651 LKERFKSFNLAYEEVIQDTDSMEGCGSSVKRGVEDFHLREGPSSIPFV------CWKVPR 490 ++ER F + Y IQ + GC + G DF LR + F+ CW P Sbjct: 99 VQERMSDFQMEYPFEIQ---GIAGC-ELISGGTIDFFLRGALEGLDFLSIKNSTCWPAPE 154 Query: 489 AAGGGKEFC 463 K+FC Sbjct: 155 GGTKAKKFC 163
>CT112_PONPY (Q5RFT9) Protein C20orf112 homolog| Length = 436 Score = 30.8 bits (68), Expect = 4.5 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Frame = +2 Query: 365 SKIDRLIKHSIFSLQRNLRPGSP-HLQGCILYT------LQNSFPPPAALGTFQQTNGML 523 S+ I HS +SL + P + G + Y+ L ++ PPA+L T +NG Sbjct: 307 SRDSAAITHSTYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPT 366 Query: 524 EGPSLRWKSSTPLLTEDPQPSMLSVS 601 + S++ +ST T P PS S S Sbjct: 367 D-LSMKGGASTTSTTPTPTPSSTSTS 391
>CT112_HUMAN (Q96MY1) Protein C20orf112| Length = 436 Score = 30.8 bits (68), Expect = 4.5 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Frame = +2 Query: 365 SKIDRLIKHSIFSLQRNLRPGSP-HLQGCILYT------LQNSFPPPAALGTFQQTNGML 523 S+ I HS +SL + P + G + Y+ L ++ PPA+L T +NG Sbjct: 307 SRDSAAITHSTYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPT 366 Query: 524 EGPSLRWKSSTPLLTEDPQPSMLSVS 601 + S++ +ST T P PS S S Sbjct: 367 D-LSMKGGASTTSTTPTPTPSSTSTS 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,498,955 Number of Sequences: 219361 Number of extensions: 1875919 Number of successful extensions: 4652 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4650 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
